Query 003931
Match_columns 785
No_of_seqs 736 out of 4132
Neff 10.2
Searched_HMMs 46136
Date Thu Mar 28 14:31:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003931.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003931hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.3E-72 5.1E-77 677.0 43.3 521 53-578 69-589 (968)
2 PLN00113 leucine-rich repeat r 100.0 9.8E-60 2.1E-64 567.5 37.9 521 77-603 69-590 (968)
3 KOG4194 Membrane glycoprotein 100.0 6.7E-40 1.4E-44 332.1 6.7 389 7-400 54-447 (873)
4 KOG4194 Membrane glycoprotein 100.0 6.4E-40 1.4E-44 332.3 3.5 369 5-378 78-450 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 5.4E-42 1.2E-46 332.6 -14.5 476 78-573 46-541 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 3.1E-41 6.7E-46 327.4 -11.2 458 170-670 64-541 (565)
7 KOG0618 Serine/threonine phosp 100.0 1.2E-37 2.7E-42 332.7 -5.4 508 9-570 2-510 (1081)
8 KOG0618 Serine/threonine phosp 100.0 5.9E-37 1.3E-41 327.6 -7.0 507 33-594 2-510 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 2.2E-33 4.7E-38 286.7 -3.3 387 171-592 4-394 (1255)
10 KOG0444 Cytoskeletal regulator 100.0 2.1E-33 4.5E-38 286.9 -5.6 342 4-356 31-375 (1255)
11 KOG4237 Extracellular matrix p 99.9 3.8E-28 8.2E-33 236.4 -4.0 410 30-474 68-498 (498)
12 PLN03210 Resistant to P. syrin 99.9 3.9E-23 8.5E-28 249.3 27.1 317 44-377 549-879 (1153)
13 KOG4237 Extracellular matrix p 99.9 3.6E-27 7.7E-32 229.7 -6.5 277 78-356 68-359 (498)
14 PLN03210 Resistant to P. syrin 99.9 7.2E-23 1.6E-27 247.0 26.6 343 20-378 549-904 (1153)
15 PRK15387 E3 ubiquitin-protein 99.8 3.3E-20 7.2E-25 207.0 17.8 262 7-338 203-464 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 7.7E-20 1.7E-24 204.1 17.6 123 248-387 343-465 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 1.2E-18 2.6E-23 196.1 12.0 204 127-356 221-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 1.7E-18 3.8E-23 194.9 12.2 225 54-308 200-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 4.7E-19 1E-23 186.4 -1.4 104 34-138 3-120 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 4.5E-19 9.7E-24 186.6 -2.6 57 58-115 3-64 (319)
21 KOG1187 Serine/threonine prote 99.7 1.7E-17 3.6E-22 173.3 6.7 98 669-766 246-355 (361)
22 KOG0617 Ras suppressor protein 99.7 1.6E-18 3.6E-23 149.9 -5.4 165 124-318 31-195 (264)
23 KOG0617 Ras suppressor protein 99.6 3.9E-18 8.4E-23 147.6 -5.4 165 171-342 30-195 (264)
24 KOG0532 Leucine-rich repeat (L 99.2 8.7E-13 1.9E-17 135.9 -4.1 172 127-308 76-247 (722)
25 KOG0532 Leucine-rich repeat (L 99.1 5.2E-12 1.1E-16 130.3 -1.1 194 463-667 74-270 (722)
26 COG4886 Leucine-rich repeat (L 99.1 9.4E-11 2E-15 126.9 7.8 199 57-266 97-296 (394)
27 COG4886 Leucine-rich repeat (L 99.1 1.2E-10 2.5E-15 126.1 7.9 198 106-313 97-295 (394)
28 PF14580 LRR_9: Leucine-rich r 99.1 4.8E-11 1E-15 109.6 3.6 130 25-159 15-149 (175)
29 PF14580 LRR_9: Leucine-rich r 99.1 8.5E-11 1.8E-15 108.0 4.5 130 48-182 14-148 (175)
30 KOG4658 Apoptotic ATPase [Sign 99.1 8.6E-11 1.9E-15 135.3 5.6 129 29-161 523-653 (889)
31 KOG3207 Beta-tubulin folding c 99.1 2.5E-11 5.4E-16 121.6 0.2 211 26-236 118-340 (505)
32 KOG3207 Beta-tubulin folding c 99.1 1.7E-11 3.7E-16 122.8 -1.2 229 34-262 98-341 (505)
33 KOG1259 Nischarin, modulator o 99.0 4.7E-11 1E-15 113.4 0.6 133 146-285 280-413 (490)
34 KOG1909 Ran GTPase-activating 99.0 2.5E-11 5.5E-16 118.3 -1.8 136 124-259 155-310 (382)
35 KOG1259 Nischarin, modulator o 99.0 6.1E-11 1.3E-15 112.7 0.6 223 4-236 181-413 (490)
36 KOG4658 Apoptotic ATPase [Sign 99.0 2.7E-10 5.9E-15 131.2 5.1 287 53-348 523-824 (889)
37 KOG1909 Ran GTPase-activating 99.0 3.8E-11 8.2E-16 117.1 -2.2 247 73-331 26-310 (382)
38 PLN03150 hypothetical protein; 99.0 8.4E-10 1.8E-14 124.8 8.1 110 272-381 419-529 (623)
39 PLN03150 hypothetical protein; 99.0 8E-10 1.7E-14 124.9 7.3 107 514-621 420-527 (623)
40 KOG0531 Protein phosphatase 1, 98.9 1.4E-10 3.1E-15 125.4 -1.4 247 26-288 69-322 (414)
41 KOG0531 Protein phosphatase 1, 98.9 1.7E-10 3.7E-15 124.8 -1.3 242 101-357 71-319 (414)
42 PF13855 LRR_8: Leucine rich r 98.8 2.1E-09 4.6E-14 81.0 2.4 59 30-88 2-60 (61)
43 PF13855 LRR_8: Leucine rich r 98.8 3E-09 6.6E-14 80.2 3.2 60 5-64 1-60 (61)
44 KOG0197 Tyrosine kinases [Sign 98.8 4.5E-09 9.7E-14 109.2 4.3 86 670-767 373-465 (468)
45 KOG0192 Tyrosine kinase specif 98.7 7.9E-09 1.7E-13 107.5 4.4 89 675-768 220-308 (362)
46 KOG1026 Nerve growth factor re 98.6 2.8E-08 6.1E-13 108.8 2.8 87 671-767 675-766 (774)
47 smart00750 KIND kinase non-cat 98.5 3.4E-08 7.3E-13 93.7 2.5 94 670-764 73-170 (176)
48 PF07714 Pkinase_Tyr: Protein 98.5 1.3E-08 2.8E-13 103.3 -0.7 85 670-760 174-259 (259)
49 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.5 8E-08 1.7E-12 99.0 4.9 92 671-764 180-282 (283)
50 PHA02988 hypothetical protein; 98.5 5.2E-08 1.1E-12 100.2 2.1 78 676-764 197-280 (283)
51 KOG1859 Leucine-rich repeat pr 98.5 2.4E-09 5.2E-14 113.9 -8.4 180 22-211 102-292 (1096)
52 cd05063 PTKc_EphR_A2 Catalytic 98.5 5.2E-08 1.1E-12 99.5 1.4 87 671-763 180-267 (268)
53 cd05038 PTKc_Jak_rpt2 Catalyti 98.4 6.2E-08 1.4E-12 99.9 1.2 92 671-764 182-284 (284)
54 cd05094 PTKc_TrkC Catalytic do 98.4 1.1E-07 2.3E-12 98.6 2.8 84 671-766 195-285 (291)
55 KOG1095 Protein tyrosine kinas 98.4 1E-07 2.2E-12 108.7 2.8 84 671-766 874-964 (1025)
56 KOG2120 SCF ubiquitin ligase, 98.4 3.4E-09 7.5E-14 101.0 -7.9 176 55-233 187-374 (419)
57 cd05048 PTKc_Ror Catalytic Dom 98.4 1.2E-07 2.7E-12 97.6 2.3 87 670-762 195-282 (283)
58 KOG2120 SCF ubiquitin ligase, 98.4 4.7E-09 1E-13 100.2 -7.9 177 175-353 186-373 (419)
59 cd05060 PTKc_Syk_like Catalyti 98.4 1.6E-07 3.5E-12 95.2 2.3 82 671-764 168-256 (257)
60 cd05111 PTK_HER3 Pseudokinase 98.4 1.8E-07 3.8E-12 96.2 2.6 87 671-765 181-270 (279)
61 KOG2982 Uncharacterized conser 98.4 1.5E-07 3.3E-12 90.0 1.8 227 78-327 46-287 (418)
62 cd05052 PTKc_Abl Catalytic dom 98.4 2.4E-07 5.3E-12 94.2 3.5 88 670-763 174-262 (263)
63 cd05102 PTKc_VEGFR3 Catalytic 98.3 1.3E-07 2.8E-12 100.3 1.4 91 670-765 245-336 (338)
64 cd05045 PTKc_RET Catalytic dom 98.3 1.6E-07 3.5E-12 97.1 2.1 82 671-764 199-287 (290)
65 cd05043 PTK_Ryk Pseudokinase d 98.3 2.2E-07 4.7E-12 95.6 2.6 83 671-765 189-278 (280)
66 cd05114 PTKc_Tec_Rlk Catalytic 98.3 2E-07 4.4E-12 94.4 2.1 78 671-760 171-255 (256)
67 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.3 1.9E-07 4.1E-12 96.3 1.9 92 671-764 181-284 (284)
68 KOG1859 Leucine-rich repeat pr 98.3 1.2E-08 2.5E-13 108.8 -7.1 199 99-308 81-292 (1096)
69 cd05053 PTKc_FGFR Catalytic do 98.3 3.7E-07 8.1E-12 94.6 4.0 89 670-764 203-292 (293)
70 cd05035 PTKc_Axl_like Catalyti 98.3 2.9E-07 6.3E-12 94.3 3.1 87 671-763 185-272 (273)
71 cd05058 PTKc_Met_Ron Catalytic 98.3 2.4E-07 5.3E-12 94.2 2.2 83 670-764 171-260 (262)
72 cd05110 PTKc_HER4 Catalytic do 98.3 2.6E-07 5.6E-12 96.3 2.3 83 671-765 181-270 (303)
73 cd05054 PTKc_VEGFR Catalytic d 98.3 2.2E-07 4.8E-12 98.1 1.6 90 670-764 244-334 (337)
74 cd05068 PTKc_Frk_like Catalyti 98.3 2.6E-07 5.6E-12 94.0 1.9 86 671-762 174-260 (261)
75 cd05047 PTKc_Tie Catalytic dom 98.3 3.3E-07 7.1E-12 93.7 2.5 86 670-763 180-268 (270)
76 cd08528 STKc_Nek10 Catalytic d 98.3 2.1E-07 4.6E-12 95.0 0.9 87 670-761 182-268 (269)
77 cd05065 PTKc_EphR_B Catalytic 98.3 4.2E-07 9.2E-12 92.8 3.0 82 670-763 180-268 (269)
78 cd05089 PTKc_Tie1 Catalytic do 98.3 4.9E-07 1.1E-11 93.9 3.3 95 670-770 187-282 (297)
79 cd08224 STKc_Nek6_Nek7 Catalyt 98.3 4.8E-07 1E-11 92.3 3.1 92 670-764 175-266 (267)
80 cd08229 STKc_Nek7 Catalytic do 98.2 5.7E-07 1.2E-11 91.8 3.5 88 671-763 176-265 (267)
81 cd05093 PTKc_TrkB Catalytic do 98.2 4.7E-07 1E-11 93.5 2.8 90 671-766 192-282 (288)
82 cd05108 PTKc_EGFR Catalytic do 98.2 4E-07 8.7E-12 95.4 2.3 87 671-765 181-270 (316)
83 cd05072 PTKc_Lyn Catalytic dom 98.2 5.1E-07 1.1E-11 91.7 2.8 80 671-762 174-260 (261)
84 cd05059 PTKc_Tec_like Catalyti 98.2 4.7E-07 1E-11 91.7 2.5 85 670-760 170-255 (256)
85 cd08228 STKc_Nek6 Catalytic do 98.2 5.1E-07 1.1E-11 92.1 2.7 86 671-764 176-266 (267)
86 KOG4721 Serine/threonine prote 98.2 9.1E-07 2E-11 92.1 4.2 98 671-778 281-383 (904)
87 KOG2982 Uncharacterized conser 98.2 1.6E-07 3.4E-12 90.0 -1.3 89 75-163 69-159 (418)
88 cd05112 PTKc_Itk Catalytic dom 98.2 6.9E-07 1.5E-11 90.5 3.3 79 670-760 170-255 (256)
89 cd05033 PTKc_EphR Catalytic do 98.2 5.9E-07 1.3E-11 91.6 2.6 87 671-763 178-265 (266)
90 cd05085 PTKc_Fer Catalytic dom 98.2 6.4E-07 1.4E-11 90.4 2.8 86 670-761 163-249 (250)
91 cd06612 STKc_MST1_2 Catalytic 98.2 5.2E-07 1.1E-11 91.4 2.1 85 670-758 168-252 (256)
92 KOG0193 Serine/threonine prote 98.2 8.5E-07 1.8E-11 93.4 3.6 83 676-765 568-655 (678)
93 cd05051 PTKc_DDR Catalytic dom 98.2 1.3E-06 2.8E-11 90.7 5.1 87 670-761 201-295 (296)
94 cd05040 PTKc_Ack_like Catalyti 98.2 4.3E-07 9.2E-12 92.1 1.2 87 670-761 169-256 (257)
95 cd05036 PTKc_ALK_LTK Catalytic 98.2 5.5E-07 1.2E-11 92.4 2.0 86 670-761 190-276 (277)
96 cd06642 STKc_STK25-YSK1 Cataly 98.2 6.9E-07 1.5E-11 91.7 2.6 84 670-759 170-253 (277)
97 cd05064 PTKc_EphR_A10 Catalyti 98.2 6.9E-07 1.5E-11 91.1 2.3 88 670-763 177-265 (266)
98 cd05044 PTKc_c-ros Catalytic d 98.2 1E-06 2.2E-11 90.0 3.6 81 670-762 182-269 (269)
99 cd05104 PTKc_Kit Catalytic dom 98.2 7.8E-07 1.7E-11 95.5 2.6 86 671-762 286-373 (375)
100 cd08218 STKc_Nek1 Catalytic do 98.2 5.2E-07 1.1E-11 91.4 1.1 83 670-758 170-252 (256)
101 cd05088 PTKc_Tie2 Catalytic do 98.2 1.3E-06 2.8E-11 91.0 4.1 91 670-766 192-283 (303)
102 KOG1024 Receptor-like protein 98.2 7.3E-07 1.6E-11 88.6 2.0 83 671-765 468-557 (563)
103 cd05097 PTKc_DDR_like Catalyti 98.2 1.6E-06 3.5E-11 89.9 4.6 92 671-762 201-295 (295)
104 cd05101 PTKc_FGFR2 Catalytic d 98.2 7.6E-07 1.7E-11 92.8 2.1 86 671-765 209-298 (304)
105 PF13306 LRR_5: Leucine rich r 98.2 5.5E-06 1.2E-10 73.8 7.3 124 22-152 5-128 (129)
106 cd05106 PTKc_CSF-1R Catalytic 98.2 1.2E-06 2.7E-11 93.8 3.7 88 670-763 283-372 (374)
107 cd05050 PTKc_Musk Catalytic do 98.1 5.3E-07 1.1E-11 93.2 0.7 87 670-762 201-288 (288)
108 cd05095 PTKc_DDR2 Catalytic do 98.1 8.5E-07 1.8E-11 92.0 2.3 88 671-762 202-296 (296)
109 cd05109 PTKc_HER2 Catalytic do 98.1 9.5E-07 2.1E-11 90.8 2.6 85 671-767 181-272 (279)
110 KOG0194 Protein tyrosine kinas 98.1 1.6E-06 3.5E-11 91.9 4.2 88 670-768 331-425 (474)
111 cd05091 PTKc_Ror2 Catalytic do 98.1 8.6E-07 1.9E-11 91.3 2.2 86 670-761 195-281 (283)
112 cd05075 PTKc_Axl Catalytic dom 98.1 8.5E-07 1.8E-11 90.8 2.0 81 671-763 184-271 (272)
113 cd05082 PTKc_Csk Catalytic dom 98.1 1.4E-06 2.9E-11 88.3 3.3 82 670-763 168-256 (256)
114 cd05074 PTKc_Tyro3 Catalytic d 98.1 1E-06 2.3E-11 90.2 2.4 78 674-763 188-272 (273)
115 cd05148 PTKc_Srm_Brk Catalytic 98.1 9.8E-07 2.1E-11 89.7 2.2 88 670-763 173-261 (261)
116 cd08529 STKc_FA2-like Catalyti 98.1 1.2E-06 2.6E-11 88.7 2.8 83 670-758 170-252 (256)
117 cd05116 PTKc_Syk Catalytic dom 98.1 9.1E-07 2E-11 89.7 1.7 80 671-762 168-254 (257)
118 cd05049 PTKc_Trk Catalytic dom 98.1 1.1E-06 2.5E-11 90.2 2.3 79 671-761 194-279 (280)
119 cd05098 PTKc_FGFR1 Catalytic d 98.1 1.1E-06 2.4E-11 91.8 2.1 90 671-766 212-302 (307)
120 cd05115 PTKc_Zap-70 Catalytic 98.1 1.2E-06 2.5E-11 88.9 2.3 81 671-763 168-255 (257)
121 cd05096 PTKc_DDR1 Catalytic do 98.1 7.3E-07 1.6E-11 92.9 0.8 85 671-762 210-304 (304)
122 cd05113 PTKc_Btk_Bmx Catalytic 98.1 1.2E-06 2.7E-11 88.6 2.4 85 670-760 170-255 (256)
123 PF13306 LRR_5: Leucine rich r 98.1 5.1E-06 1.1E-10 74.0 6.1 124 46-176 5-128 (129)
124 cd06609 STKc_MST3_like Catalyt 98.1 9.4E-07 2E-11 90.5 1.5 84 670-758 167-250 (274)
125 cd05070 PTKc_Fyn_Yrk Catalytic 98.1 1.7E-06 3.8E-11 87.8 3.3 87 670-762 172-259 (260)
126 cd05105 PTKc_PDGFR_alpha Catal 98.1 1.3E-06 2.8E-11 94.1 2.5 87 671-764 309-398 (400)
127 cd06651 STKc_MEKK3 Catalytic d 98.1 1.1E-06 2.3E-11 89.6 1.7 81 671-758 179-260 (266)
128 cd05092 PTKc_TrkA Catalytic do 98.1 1.5E-06 3.2E-11 89.4 2.7 86 670-761 193-279 (280)
129 cd05066 PTKc_EphR_A Catalytic 98.1 1.4E-06 3E-11 88.9 2.4 87 670-763 178-266 (267)
130 cd05084 PTKc_Fes Catalytic dom 98.1 1.3E-06 2.8E-11 88.3 2.1 85 671-761 166-251 (252)
131 cd05079 PTKc_Jak1_rpt2 Catalyt 98.1 1.2E-06 2.5E-11 90.4 1.8 91 671-763 182-283 (284)
132 cd06640 STKc_MST4 Catalytic do 98.1 1.8E-06 3.9E-11 88.6 3.1 84 670-759 170-253 (277)
133 cd05069 PTKc_Yes Catalytic dom 98.1 1.7E-06 3.7E-11 87.8 2.8 81 670-762 172-259 (260)
134 cd05057 PTKc_EGFR_like Catalyt 98.1 1.8E-06 3.8E-11 88.8 2.6 89 671-765 181-270 (279)
135 cd05032 PTKc_InsR_like Catalyt 98.1 1.7E-06 3.8E-11 88.7 2.2 86 670-761 190-276 (277)
136 cd05099 PTKc_FGFR4 Catalytic d 98.0 2.2E-06 4.8E-11 89.7 3.0 84 671-766 206-296 (314)
137 cd05090 PTKc_Ror1 Catalytic do 98.0 1.4E-06 3E-11 89.8 1.2 85 671-762 196-282 (283)
138 cd05071 PTKc_Src Catalytic dom 98.0 1.9E-06 4.1E-11 87.6 2.1 87 670-762 172-259 (262)
139 cd05062 PTKc_IGF-1R Catalytic 98.0 1E-06 2.2E-11 90.4 0.2 86 671-762 191-277 (277)
140 cd06637 STKc_TNIK Catalytic do 98.0 1.3E-06 2.7E-11 89.5 0.7 77 677-758 192-268 (272)
141 cd05039 PTKc_Csk_like Catalyti 98.0 1.8E-06 4E-11 87.3 1.9 82 670-763 168-256 (256)
142 cd05055 PTKc_PDGFR Catalytic d 98.0 1.6E-06 3.4E-11 90.3 1.0 87 671-762 213-300 (302)
143 KOG0196 Tyrosine kinase, EPH ( 98.0 1.1E-06 2.4E-11 95.0 -0.1 85 671-763 804-891 (996)
144 cd06621 PKc_MAPKK_Pek1_like Ca 98.0 2.2E-06 4.7E-11 88.5 2.1 88 671-758 173-265 (287)
145 cd05056 PTKc_FAK Catalytic dom 98.0 3.3E-06 7.1E-11 86.3 3.4 83 671-765 178-267 (270)
146 cd05067 PTKc_Lck_Blk Catalytic 98.0 3.3E-06 7.1E-11 85.8 3.3 84 671-762 173-259 (260)
147 cd06610 STKc_OSR1_SPAK Catalyt 98.0 3.2E-06 6.9E-11 86.2 3.1 80 677-758 183-263 (267)
148 cd05073 PTKc_Hck Catalytic dom 98.0 4.4E-06 9.5E-11 84.8 3.9 81 670-762 172-259 (260)
149 cd05083 PTKc_Chk Catalytic dom 98.0 2.9E-06 6.3E-11 85.8 2.2 86 671-762 167-253 (254)
150 cd06639 STKc_myosinIIIB Cataly 98.0 2.3E-06 4.9E-11 88.6 1.3 78 677-758 209-286 (291)
151 cd06624 STKc_ASK Catalytic dom 98.0 4.2E-06 9E-11 85.4 3.2 75 678-758 188-264 (268)
152 cd08217 STKc_Nek2 Catalytic do 98.0 3.3E-06 7.1E-11 85.9 2.3 82 671-758 180-261 (265)
153 cd05100 PTKc_FGFR3 Catalytic d 98.0 3.5E-06 7.7E-11 89.0 2.6 86 671-765 206-295 (334)
154 cd05061 PTKc_InsR Catalytic do 98.0 2.8E-06 6.1E-11 87.7 1.8 88 670-763 190-278 (288)
155 cd05041 PTKc_Fes_like Catalyti 98.0 2.5E-06 5.5E-11 86.1 1.3 86 670-761 164-250 (251)
156 cd08225 STKc_Nek5 Catalytic do 97.9 3.8E-06 8.2E-11 85.1 2.4 80 670-758 171-253 (257)
157 cd06607 STKc_TAO Catalytic dom 97.9 3.1E-06 6.8E-11 88.3 1.8 79 676-759 189-267 (307)
158 KOG4579 Leucine-rich repeat (L 97.9 4.6E-07 9.9E-12 76.7 -3.6 84 222-308 53-136 (177)
159 cd05103 PTKc_VEGFR2 Catalytic 97.9 5.1E-06 1.1E-10 88.1 3.3 88 671-765 251-341 (343)
160 cd08223 STKc_Nek4 Catalytic do 97.9 3.9E-06 8.4E-11 85.0 2.3 80 670-758 171-253 (257)
161 KOG0200 Fibroblast/platelet-de 97.9 4.7E-06 1E-10 94.4 3.2 80 671-762 491-578 (609)
162 cd06638 STKc_myosinIIIA Cataly 97.9 6.8E-06 1.5E-10 84.8 3.9 80 676-759 204-283 (286)
163 cd05107 PTKc_PDGFR_beta Cataly 97.9 2.5E-06 5.4E-11 91.9 0.4 86 671-763 311-399 (401)
164 cd06658 STKc_PAK5 Catalytic do 97.9 3.9E-06 8.5E-11 86.8 1.7 85 671-759 188-272 (292)
165 COG5238 RNA1 Ran GTPase-activa 97.9 1.9E-06 4.1E-11 81.6 -0.8 189 73-261 88-317 (388)
166 KOG4579 Leucine-rich repeat (L 97.9 8.6E-07 1.9E-11 75.0 -2.8 83 465-549 54-136 (177)
167 cd08220 STKc_Nek8 Catalytic do 97.9 5.4E-06 1.2E-10 83.9 2.4 82 671-758 171-252 (256)
168 cd06605 PKc_MAPKK Catalytic do 97.9 3.8E-06 8.3E-11 85.5 1.3 87 670-758 168-256 (265)
169 cd05086 PTKc_Aatyk2 Catalytic 97.9 8.5E-06 1.9E-10 83.1 3.8 77 677-761 184-267 (268)
170 cd06654 STKc_PAK1 Catalytic do 97.9 6.8E-06 1.5E-10 85.2 3.1 83 670-758 185-269 (296)
171 cd00192 PTKc Catalytic domain 97.9 6.3E-06 1.4E-10 83.7 2.7 84 670-760 176-261 (262)
172 KOG1644 U2-associated snRNP A' 97.9 2.7E-05 5.8E-10 71.0 6.3 126 31-160 21-150 (233)
173 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.9 5E-06 1.1E-10 84.3 1.8 76 677-760 181-257 (258)
174 cd05034 PTKc_Src_like Catalyti 97.9 7.1E-06 1.5E-10 83.3 2.8 86 670-762 173-260 (261)
175 cd06656 STKc_PAK3 Catalytic do 97.9 9.5E-06 2.1E-10 84.1 3.6 97 670-770 184-282 (297)
176 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.9 1.2E-05 2.5E-10 82.2 4.1 77 677-761 185-268 (269)
177 cd06616 PKc_MKK4 Catalytic dom 97.9 6E-06 1.3E-10 85.3 1.9 78 677-758 186-266 (288)
178 cd06613 STKc_MAP4K3_like Catal 97.8 7.1E-06 1.5E-10 83.4 2.4 78 677-758 180-259 (262)
179 cd06608 STKc_myosinIII_like Ca 97.8 6.1E-06 1.3E-10 84.5 1.9 78 677-758 194-271 (275)
180 cd08219 STKc_Nek3 Catalytic do 97.8 7.2E-06 1.6E-10 82.9 2.3 82 671-759 170-252 (255)
181 cd06917 STKc_NAK1_like Catalyt 97.8 7.1E-06 1.5E-10 84.2 2.2 77 677-758 178-254 (277)
182 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.8 7.9E-06 1.7E-10 83.6 2.6 77 676-760 196-273 (274)
183 PHA02882 putative serine/threo 97.8 3.7E-06 7.9E-11 87.1 0.1 85 671-760 203-293 (294)
184 COG5238 RNA1 Ran GTPase-activa 97.8 1.8E-06 3.8E-11 81.8 -2.1 88 269-356 212-316 (388)
185 cd06641 STKc_MST3 Catalytic do 97.8 8.4E-06 1.8E-10 83.6 2.7 83 671-759 171-253 (277)
186 cd06648 STKc_PAK_II Catalytic 97.8 7.1E-06 1.5E-10 84.6 2.0 81 671-758 185-268 (285)
187 cd06619 PKc_MKK5 Catalytic dom 97.8 4.2E-06 9E-11 86.0 0.3 80 674-758 166-252 (279)
188 PRK15386 type III secretion pr 97.8 4.6E-05 9.9E-10 79.2 7.8 178 483-687 47-236 (426)
189 cd05122 PKc_STE Catalytic doma 97.8 7.5E-06 1.6E-10 82.5 2.0 85 670-758 166-250 (253)
190 KOG2345 Serine/threonine prote 97.8 2.1E-05 4.6E-10 73.9 4.4 85 674-763 214-300 (302)
191 cd05037 PTK_Jak_rpt1 Pseudokin 97.8 1E-05 2.2E-10 82.1 2.5 76 677-760 182-258 (259)
192 cd07838 STKc_CDK4_6_like Catal 97.8 2E-05 4.4E-10 81.2 4.8 88 671-758 176-283 (287)
193 cd06628 STKc_MAPKKK_Byr2_like 97.8 1.1E-05 2.5E-10 82.1 2.8 82 671-758 182-263 (267)
194 cd06620 PKc_MAPKK_Byr1_like Ca 97.8 6.7E-06 1.5E-10 84.7 1.1 88 671-760 172-267 (284)
195 cd06606 STKc_MAPKKK Catalytic 97.8 9.4E-06 2E-10 82.2 2.2 84 670-758 172-256 (260)
196 KOG1644 U2-associated snRNP A' 97.8 4.3E-05 9.4E-10 69.6 6.1 125 55-183 21-149 (233)
197 cd06623 PKc_MAPKK_plant_like C 97.8 1.1E-05 2.4E-10 82.0 2.7 83 671-758 170-255 (264)
198 cd07846 STKc_CDKL2_3 Catalytic 97.8 1.1E-05 2.3E-10 83.3 2.4 83 676-758 176-282 (286)
199 cd07830 STKc_MAK_like Catalyti 97.8 1.2E-05 2.5E-10 82.9 2.7 83 676-758 174-279 (283)
200 cd06643 STKc_SLK Catalytic dom 97.8 1E-05 2.2E-10 83.2 2.3 78 677-758 184-261 (282)
201 PTZ00283 serine/threonine prot 97.8 5.1E-06 1.1E-10 92.2 0.0 80 670-758 214-296 (496)
202 cd06629 STKc_MAPKKK_Bck1_like 97.8 8.7E-06 1.9E-10 83.3 1.6 75 678-758 189-268 (272)
203 cd06649 PKc_MEK2 Catalytic dom 97.8 1.4E-05 3E-10 84.4 3.1 33 670-702 171-203 (331)
204 cd08227 PK_STRAD_alpha Pseudok 97.8 9.4E-06 2E-10 85.5 1.8 26 677-702 186-211 (327)
205 cd07862 STKc_CDK6 Catalytic do 97.8 1.1E-05 2.4E-10 83.4 2.2 88 671-758 179-286 (290)
206 KOG0199 ACK and related non-re 97.8 1.2E-05 2.6E-10 86.1 2.4 81 671-760 285-369 (1039)
207 cd06631 STKc_YSK4 Catalytic do 97.8 1.3E-05 2.9E-10 81.5 2.7 82 671-758 178-261 (265)
208 cd06615 PKc_MEK Catalytic doma 97.8 2.1E-05 4.6E-10 82.0 4.2 32 671-702 168-199 (308)
209 cd06659 STKc_PAK6 Catalytic do 97.8 1.3E-05 2.7E-10 83.2 2.4 86 670-759 186-271 (297)
210 cd06614 STKc_PAK Catalytic dom 97.7 1E-05 2.2E-10 83.4 1.7 84 671-758 186-269 (286)
211 cd06636 STKc_MAP4K4_6 Catalyti 97.7 1E-05 2.2E-10 83.2 1.7 78 676-758 201-278 (282)
212 cd06655 STKc_PAK2 Catalytic do 97.7 1E-05 2.2E-10 83.9 1.6 84 671-758 185-268 (296)
213 PLN00034 mitogen-activated pro 97.7 7.8E-06 1.7E-10 87.1 0.5 75 678-758 250-327 (353)
214 cd06634 STKc_TAO2 Catalytic do 97.7 1.2E-05 2.5E-10 84.0 1.8 79 676-759 189-267 (308)
215 cd06635 STKc_TAO1 Catalytic do 97.7 9.5E-06 2.1E-10 85.1 1.1 81 676-761 199-279 (317)
216 PLN00181 protein SPA1-RELATED; 97.7 8.8E-06 1.9E-10 96.3 0.9 81 670-758 184-264 (793)
217 smart00220 S_TKc Serine/Threon 97.7 1E-05 2.2E-10 81.0 1.2 85 670-758 155-240 (244)
218 cd06618 PKc_MKK7 Catalytic dom 97.7 8.2E-06 1.8E-10 84.6 0.5 80 677-759 194-273 (296)
219 cd07835 STKc_CDK1_like Catalyt 97.7 1E-05 2.2E-10 83.3 1.2 82 677-758 176-279 (283)
220 cd08530 STKc_CNK2-like Catalyt 97.7 2E-05 4.3E-10 79.7 3.3 82 671-758 171-252 (256)
221 cd05077 PTK_Jak1_rpt1 Pseudoki 97.7 9.8E-06 2.1E-10 82.3 0.9 77 676-760 184-261 (262)
222 cd06646 STKc_MAP4K5 Catalytic 97.7 1E-05 2.2E-10 82.5 0.9 79 676-758 184-264 (267)
223 cd07859 STKc_TDY_MAPK_plant Ca 97.7 7.6E-06 1.6E-10 86.8 -0.1 26 676-701 183-208 (338)
224 cd07833 STKc_CDKL Catalytic do 97.7 1E-05 2.3E-10 83.5 0.7 88 671-758 171-284 (288)
225 cd06644 STKc_STK10_LOK Catalyt 97.7 1.9E-05 4E-10 81.8 2.4 77 678-758 192-268 (292)
226 cd05607 STKc_GRK7 Catalytic do 97.7 1E-05 2.2E-10 83.0 0.4 88 670-760 163-251 (277)
227 smart00219 TyrKc Tyrosine kina 97.7 1.7E-05 3.7E-10 80.3 1.8 78 671-760 174-258 (258)
228 PF00069 Pkinase: Protein kina 97.7 3E-06 6.5E-11 86.0 -3.8 89 670-758 167-256 (260)
229 cd06626 STKc_MEKK4 Catalytic d 97.7 1.8E-05 3.8E-10 80.5 1.7 77 678-758 183-260 (264)
230 PF12799 LRR_4: Leucine Rich r 97.6 4.3E-05 9.4E-10 52.4 3.0 39 5-44 1-39 (44)
231 cd06611 STKc_SLK_like Catalyti 97.6 2E-05 4.3E-10 81.0 1.8 79 676-758 183-261 (280)
232 cd08226 PK_STRAD_beta Pseudoki 97.6 4E-05 8.6E-10 80.8 4.1 25 678-702 187-211 (328)
233 cd05046 PTK_CCK4 Pseudokinase 97.6 4E-05 8.6E-10 78.5 4.1 80 671-761 188-274 (275)
234 cd07831 STKc_MOK Catalytic dom 97.6 2.4E-05 5.3E-10 80.4 2.4 83 676-758 174-278 (282)
235 cd06625 STKc_MEKK3_like Cataly 97.6 3.2E-05 6.9E-10 78.6 3.3 79 674-758 180-259 (263)
236 cd05579 STKc_MAST_like Catalyt 97.6 1.2E-05 2.6E-10 81.8 0.0 86 671-761 171-256 (265)
237 cd08221 STKc_Nek9 Catalytic do 97.6 1.8E-05 3.8E-10 80.1 1.3 83 671-759 171-253 (256)
238 cd08222 STKc_Nek11 Catalytic d 97.6 2.3E-05 5.1E-10 79.4 2.1 82 671-758 175-256 (260)
239 cd07860 STKc_CDK2_3 Catalytic 97.6 1.8E-05 3.9E-10 81.5 1.2 24 678-701 178-201 (284)
240 cd06650 PKc_MEK1 Catalytic dom 97.6 5.1E-05 1.1E-09 80.1 4.6 32 671-702 172-203 (333)
241 cd05118 STKc_CMGC Catalytic do 97.6 1.6E-05 3.6E-10 81.7 0.8 82 677-758 175-279 (283)
242 cd05618 STKc_aPKC_iota Catalyt 97.6 2.1E-05 4.5E-10 82.9 1.4 79 670-752 165-249 (329)
243 cd06622 PKc_MAPKK_PBS2_like Ca 97.6 2.2E-05 4.8E-10 80.9 1.5 79 677-758 183-261 (286)
244 cd07840 STKc_CDK9_like Catalyt 97.6 1.4E-05 3E-10 82.5 -0.1 82 677-758 178-283 (287)
245 cd06647 STKc_PAK_I Catalytic d 97.6 3.5E-05 7.6E-10 79.7 2.8 80 675-759 189-269 (293)
246 PRK15386 type III secretion pr 97.6 0.00035 7.6E-09 72.7 10.0 55 27-87 50-104 (426)
247 cd05585 STKc_YPK1_like Catalyt 97.6 1.7E-05 3.8E-10 82.8 0.5 80 671-760 163-245 (312)
248 cd05574 STKc_phototropin_like 97.6 2.2E-05 4.8E-10 82.3 1.2 88 670-762 201-288 (316)
249 cd07848 STKc_CDKL5 Catalytic d 97.6 5.6E-05 1.2E-09 77.9 4.1 32 670-701 170-201 (287)
250 cd05042 PTKc_Aatyk Catalytic d 97.6 2.1E-05 4.5E-10 80.3 0.8 78 676-761 184-268 (269)
251 cd05631 STKc_GRK4 Catalytic do 97.6 2.5E-05 5.4E-10 80.5 1.3 85 670-758 170-260 (285)
252 cd05610 STKc_MASTL Catalytic d 97.6 2E-05 4.3E-10 90.9 0.7 86 670-759 549-634 (669)
253 cd07874 STKc_JNK3 Catalytic do 97.6 3.4E-05 7.5E-10 82.3 2.4 32 670-701 187-218 (355)
254 PTZ00267 NIMA-related protein 97.6 1.6E-05 3.4E-10 88.3 -0.2 83 670-758 240-322 (478)
255 cd05600 STKc_Sid2p_Dbf2p Catal 97.5 6E-05 1.3E-09 79.6 3.9 87 670-759 167-257 (333)
256 cd06627 STKc_Cdc7_like Catalyt 97.5 3.4E-05 7.4E-10 77.8 1.9 82 671-758 169-250 (254)
257 cd08216 PK_STRAD Pseudokinase 97.5 3E-05 6.6E-10 81.1 1.6 81 678-758 187-294 (314)
258 KOG1023 Natriuretic peptide re 97.5 5.7E-05 1.2E-09 80.6 3.5 86 677-766 134-227 (484)
259 cd06632 STKc_MEKK1_plant Catal 97.5 2.3E-05 5E-10 79.3 0.5 73 678-758 179-254 (258)
260 cd07829 STKc_CDK_like Catalyti 97.5 2.1E-05 4.5E-10 80.9 0.1 82 677-758 175-278 (282)
261 PF12799 LRR_4: Leucine Rich r 97.5 7.1E-05 1.5E-09 51.3 2.7 35 273-308 3-37 (44)
262 cd07863 STKc_CDK4 Catalytic do 97.5 4.5E-05 9.9E-10 78.7 2.6 87 671-757 177-283 (288)
263 cd05608 STKc_GRK1 Catalytic do 97.5 2.5E-05 5.4E-10 80.2 0.6 80 670-753 166-246 (280)
264 cd07866 STKc_BUR1 Catalytic do 97.5 4E-05 8.6E-10 80.1 2.2 83 676-758 202-307 (311)
265 KOG1025 Epidermal growth facto 97.5 6.1E-05 1.3E-09 82.4 3.5 78 674-763 873-957 (1177)
266 cd05583 STKc_MSK_N N-terminal 97.5 2.1E-05 4.6E-10 81.1 0.0 80 678-763 185-267 (288)
267 cd06633 STKc_TAO3 Catalytic do 97.5 2.4E-05 5.2E-10 81.8 0.4 78 676-758 195-272 (313)
268 KOG3665 ZYG-1-like serine/thre 97.5 5.8E-05 1.2E-09 85.5 3.4 110 52-164 147-264 (699)
269 KOG0596 Dual specificity; seri 97.5 3.2E-05 6.9E-10 80.9 1.2 79 675-758 546-626 (677)
270 cd07847 STKc_CDKL1_4 Catalytic 97.5 4.8E-05 1E-09 78.4 2.6 82 676-758 176-282 (286)
271 cd06617 PKc_MKK3_6 Catalytic d 97.5 3.7E-05 8E-10 79.1 1.6 75 677-758 183-260 (283)
272 cd06657 STKc_PAK4 Catalytic do 97.5 2.7E-05 5.8E-10 80.5 0.5 84 671-758 186-269 (292)
273 cd05611 STKc_Rim15_like Cataly 97.5 2.1E-05 4.6E-10 79.8 -0.3 84 675-761 167-250 (260)
274 cd06630 STKc_MEKK1 Catalytic d 97.5 5.5E-05 1.2E-09 77.1 2.3 77 675-757 182-262 (268)
275 cd06645 STKc_MAP4K3 Catalytic 97.5 9.2E-05 2E-09 75.4 3.9 78 676-758 184-264 (267)
276 cd07870 STKc_PFTAIRE2 Catalyti 97.5 5.4E-05 1.2E-09 78.3 2.2 25 678-702 181-205 (291)
277 cd07852 STKc_MAPK15 Catalytic 97.5 3.6E-05 7.9E-10 81.4 0.9 88 677-764 189-302 (337)
278 cd05592 STKc_nPKC_theta_delta 97.4 3.7E-05 7.9E-10 80.5 0.7 78 671-757 166-245 (316)
279 KOG3665 ZYG-1-like serine/thre 97.4 5E-05 1.1E-09 86.0 1.9 136 77-214 122-266 (699)
280 cd08215 STKc_Nek Catalytic dom 97.4 6.6E-05 1.4E-09 75.9 2.6 82 671-758 173-254 (258)
281 KOG4278 Protein tyrosine kinas 97.4 6.2E-05 1.3E-09 79.6 2.3 79 677-763 442-523 (1157)
282 cd05604 STKc_SGK3 Catalytic do 97.4 2.5E-05 5.5E-10 82.2 -0.7 83 671-760 166-248 (325)
283 cd05609 STKc_MAST Catalytic do 97.4 5E-05 1.1E-09 79.1 1.5 85 671-762 186-273 (305)
284 cd05582 STKc_RSK_N N-terminal 97.4 2.7E-05 5.9E-10 81.7 -0.6 78 671-755 168-245 (318)
285 cd05584 STKc_p70S6K Catalytic 97.4 4.7E-05 1E-09 80.0 0.8 81 671-758 170-255 (323)
286 cd07864 STKc_CDK12 Catalytic d 97.4 4.3E-05 9.4E-10 79.5 0.5 82 677-758 194-298 (302)
287 KOG4341 F-box protein containi 97.4 3.6E-06 7.9E-11 84.8 -7.1 295 6-302 139-459 (483)
288 cd07849 STKc_ERK1_2_like Catal 97.4 3.7E-05 8.1E-10 81.3 -0.1 88 677-764 186-299 (336)
289 cd07873 STKc_PCTAIRE1 Catalyti 97.4 8.8E-05 1.9E-09 77.1 2.6 93 677-769 181-298 (301)
290 cd07844 STKc_PCTAIRE_like Cata 97.4 5.4E-05 1.2E-09 78.3 0.8 25 677-701 180-204 (291)
291 cd05588 STKc_aPKC Catalytic do 97.4 5.3E-05 1.2E-09 79.8 0.8 84 670-757 165-260 (329)
292 cd05591 STKc_nPKC_epsilon Cata 97.4 5.8E-05 1.3E-09 79.2 1.0 81 670-757 165-252 (321)
293 cd05570 STKc_PKC Catalytic dom 97.4 4.4E-05 9.6E-10 80.0 0.0 82 670-758 165-251 (318)
294 cd07867 STKc_CDC2L6 Catalytic 97.4 0.00011 2.3E-09 77.2 2.8 25 677-701 192-216 (317)
295 PLN00009 cyclin-dependent kina 97.3 0.00012 2.7E-09 75.7 3.3 25 677-701 180-204 (294)
296 PRK13184 pknD serine/threonine 97.3 8.1E-05 1.8E-09 86.0 2.0 90 670-763 200-290 (932)
297 cd07839 STKc_CDK5 Catalytic do 97.3 5.7E-05 1.2E-09 77.8 0.7 24 678-701 177-200 (284)
298 cd05617 STKc_aPKC_zeta Catalyt 97.3 5.8E-05 1.3E-09 79.4 0.6 81 670-754 165-249 (327)
299 cd07865 STKc_CDK9 Catalytic do 97.3 7.3E-05 1.6E-09 78.1 1.4 24 678-701 201-224 (310)
300 cd05571 STKc_PKB Catalytic dom 97.3 6.2E-05 1.3E-09 79.1 0.7 79 671-758 165-250 (323)
301 PTZ00284 protein kinase; Provi 97.3 0.0001 2.2E-09 81.8 2.4 33 670-702 314-346 (467)
302 cd06652 STKc_MEKK2 Catalytic d 97.3 7.2E-05 1.6E-09 76.1 1.1 32 671-702 179-210 (265)
303 PTZ00266 NIMA-related protein 97.3 6.1E-05 1.3E-09 87.5 0.6 82 676-764 218-302 (1021)
304 cd05573 STKc_ROCK_NDR_like Cat 97.3 0.00014 3E-09 77.5 3.2 33 670-702 199-231 (350)
305 cd07879 STKc_p38delta_MAPK13 C 97.3 9.7E-05 2.1E-09 78.3 2.0 90 676-765 190-305 (342)
306 cd05575 STKc_SGK Catalytic dom 97.3 4.6E-05 1E-09 80.1 -0.5 78 671-755 166-243 (323)
307 cd07841 STKc_CDK7 Catalytic do 97.3 0.0001 2.2E-09 76.5 2.1 83 677-759 179-282 (298)
308 cd05616 STKc_cPKC_beta Catalyt 97.3 6.9E-05 1.5E-09 78.8 0.7 77 670-753 170-246 (323)
309 cd05578 STKc_Yank1 Catalytic d 97.3 0.00012 2.7E-09 74.0 2.6 79 671-754 169-248 (258)
310 cd07837 STKc_CdkB_plant Cataly 97.3 8.7E-05 1.9E-09 76.9 1.4 82 677-758 188-290 (295)
311 cd07876 STKc_JNK2 Catalytic do 97.3 7.8E-05 1.7E-09 79.7 1.0 31 671-701 192-222 (359)
312 cd07875 STKc_JNK1 Catalytic do 97.3 7.3E-05 1.6E-09 80.1 0.7 32 670-701 194-225 (364)
313 KOG0581 Mitogen-activated prot 97.3 0.00016 3.4E-09 72.5 2.9 77 674-758 250-334 (364)
314 cd05605 STKc_GRK4_like Catalyt 97.3 8.6E-05 1.9E-09 76.5 1.1 83 671-756 171-258 (285)
315 cd05632 STKc_GRK5 Catalytic do 97.3 5.7E-05 1.2E-09 77.8 -0.3 83 670-756 170-253 (285)
316 PHA03212 serine/threonine kina 97.3 0.00014 3E-09 78.4 2.7 30 671-700 253-282 (391)
317 cd07861 STKc_CDK1_euk Catalyti 97.3 0.00015 3.1E-09 74.8 2.6 25 677-701 178-202 (285)
318 cd05619 STKc_nPKC_theta Cataly 97.3 6.8E-05 1.5E-09 78.5 0.1 72 671-755 166-243 (316)
319 cd05603 STKc_SGK2 Catalytic do 97.3 6.5E-05 1.4E-09 78.9 -0.0 77 671-754 166-242 (321)
320 cd05590 STKc_nPKC_eta Catalyti 97.3 7.8E-05 1.7E-09 78.2 0.5 77 670-753 165-241 (320)
321 cd07850 STKc_JNK Catalytic dom 97.2 0.00019 4.1E-09 76.5 3.4 32 670-701 186-217 (353)
322 cd05589 STKc_PKN Catalytic dom 97.2 7.9E-05 1.7E-09 78.3 0.4 78 671-755 171-248 (324)
323 KOG0198 MEKK and related serin 97.2 0.00019 4.2E-09 72.7 3.1 72 680-759 201-276 (313)
324 cd07858 STKc_TEY_MAPK_plant Ca 97.2 7.7E-05 1.7E-09 78.9 0.3 88 676-763 184-297 (337)
325 cd05593 STKc_PKB_gamma Catalyt 97.2 0.00012 2.6E-09 77.1 1.6 79 671-758 165-250 (328)
326 cd05620 STKc_nPKC_delta Cataly 97.2 7.9E-05 1.7E-09 78.0 0.2 79 670-755 165-243 (316)
327 KOG0603 Ribosomal protein S6 k 97.2 0.00015 3.2E-09 77.7 2.2 77 671-757 483-561 (612)
328 cd07855 STKc_ERK5 Catalytic do 97.2 0.0002 4.4E-09 75.6 3.2 83 676-758 187-293 (334)
329 PHA03209 serine/threonine kina 97.2 0.00012 2.7E-09 78.0 1.6 30 671-700 226-255 (357)
330 cd05612 STKc_PRKX_like Catalyt 97.2 6.6E-05 1.4E-09 77.6 -0.5 75 671-752 168-242 (291)
331 cd07851 STKc_p38 Catalytic dom 97.2 0.00015 3.3E-09 76.8 2.3 82 677-758 192-297 (343)
332 cd07842 STKc_CDK8_like Catalyt 97.2 0.00023 5E-09 74.5 3.4 25 677-701 192-216 (316)
333 cd07853 STKc_NLK Catalytic dom 97.2 9E-05 2E-09 79.6 0.2 26 677-702 181-206 (372)
334 cd05614 STKc_MSK2_N N-terminal 97.2 0.0002 4.3E-09 75.6 2.6 74 678-757 184-265 (332)
335 cd05630 STKc_GRK6 Catalytic do 97.2 0.00012 2.6E-09 75.4 1.0 83 670-758 170-260 (285)
336 KOG2123 Uncharacterized conser 97.2 1.4E-05 3.1E-10 76.1 -5.3 100 221-325 18-123 (388)
337 cd05595 STKc_PKB_beta Catalyti 97.2 8.1E-05 1.8E-09 78.2 -0.6 81 671-758 165-250 (323)
338 KOG0582 Ste20-like serine/thre 97.1 0.00024 5.2E-09 72.7 2.7 75 678-758 209-292 (516)
339 PTZ00263 protein kinase A cata 97.1 0.00013 2.9E-09 76.8 0.9 80 671-757 185-269 (329)
340 cd07836 STKc_Pho85 Catalytic d 97.1 0.00015 3.2E-09 74.7 1.2 25 678-702 178-202 (284)
341 PHA03390 pk1 serine/threonine- 97.1 0.00012 2.6E-09 74.5 0.4 83 671-757 176-260 (267)
342 cd05587 STKc_cPKC Catalytic do 97.1 0.0001 2.2E-09 77.5 -0.2 76 671-753 171-246 (324)
343 PHA03207 serine/threonine kina 97.1 0.00027 5.8E-09 76.4 3.0 32 670-701 256-287 (392)
344 KOG4257 Focal adhesion tyrosin 97.1 0.0002 4.3E-09 76.1 1.8 83 676-765 567-651 (974)
345 cd05577 STKc_GRK Catalytic dom 97.1 0.00017 3.6E-09 74.0 1.2 84 671-760 164-251 (277)
346 cd07832 STKc_CCRK Catalytic do 97.1 0.00019 4.1E-09 73.9 1.5 81 678-758 178-281 (286)
347 cd07872 STKc_PCTAIRE2 Catalyti 97.1 0.00014 3E-09 76.0 0.4 25 677-701 181-205 (309)
348 cd05602 STKc_SGK1 Catalytic do 97.1 0.00011 2.3E-09 77.4 -0.5 83 670-759 165-247 (325)
349 cd05572 STKc_cGK_PKG Catalytic 97.1 0.00019 4E-09 72.9 1.2 82 671-755 162-243 (262)
350 PTZ00024 cyclin-dependent prot 97.1 0.00016 3.6E-09 76.4 0.8 82 677-758 210-312 (335)
351 cd07843 STKc_CDC2L1 Catalytic 97.1 0.00021 4.6E-09 73.9 1.6 24 678-701 184-207 (293)
352 cd07878 STKc_p38beta_MAPK11 Ca 97.1 0.00031 6.6E-09 74.6 2.8 25 677-701 192-216 (343)
353 cd05601 STKc_CRIK Catalytic do 97.1 0.00023 4.9E-09 75.1 1.7 27 676-702 184-210 (330)
354 cd07856 STKc_Sty1_Hog1 Catalyt 97.1 0.00021 4.5E-09 75.2 1.5 83 677-759 182-288 (328)
355 cd07834 STKc_MAPK Catalytic do 97.1 0.0002 4.3E-09 75.6 1.1 90 677-766 183-298 (330)
356 cd05626 STKc_LATS2 Catalytic d 97.0 0.00052 1.1E-08 73.9 4.2 84 670-758 217-304 (381)
357 cd05594 STKc_PKB_alpha Catalyt 97.0 0.00013 2.9E-09 76.7 -0.4 82 670-758 165-251 (325)
358 PHA03211 serine/threonine kina 97.0 0.00044 9.5E-09 75.7 3.5 31 670-700 331-361 (461)
359 KOG4341 F-box protein containi 97.0 1.6E-05 3.4E-10 80.4 -6.9 135 196-330 292-437 (483)
360 cd07854 STKc_MAPK4_6 Catalytic 97.0 0.00017 3.7E-09 76.4 0.3 27 676-702 194-220 (342)
361 cd05628 STKc_NDR1 Catalytic do 97.0 0.00035 7.7E-09 74.7 2.5 33 670-702 205-237 (363)
362 cd05615 STKc_cPKC_alpha Cataly 97.0 0.00016 3.5E-09 75.9 -0.2 78 670-754 170-247 (323)
363 cd05586 STKc_Sck1_like Catalyt 96.9 0.00025 5.4E-09 74.8 0.6 75 678-760 174-250 (330)
364 cd05123 STKc_AGC Catalytic dom 96.9 0.00022 4.7E-09 71.8 0.1 78 671-755 163-240 (250)
365 cd05606 STKc_beta_ARK Catalyti 96.9 0.00052 1.1E-08 70.4 2.9 76 677-758 172-254 (278)
366 cd07868 STKc_CDK8 Catalytic do 96.9 0.00044 9.6E-09 72.4 2.3 25 677-701 192-216 (317)
367 cd07869 STKc_PFTAIRE1 Catalyti 96.9 0.00043 9.4E-09 72.0 2.1 26 677-702 180-205 (303)
368 cd07845 STKc_CDK10 Catalytic d 96.9 0.00036 7.7E-09 72.8 1.4 24 678-701 186-209 (309)
369 KOG2739 Leucine-rich acidic nu 96.9 0.0006 1.3E-08 65.3 2.7 62 27-90 41-104 (260)
370 cd05581 STKc_PDK1 Catalytic do 96.9 0.0002 4.3E-09 73.5 -0.7 77 671-754 192-268 (280)
371 PLN03225 Serine/threonine-prot 96.9 0.00048 1E-08 77.5 2.3 82 677-758 355-449 (566)
372 PTZ00426 cAMP-dependent protei 96.9 0.00034 7.5E-09 73.9 1.1 82 670-758 197-283 (340)
373 cd05633 STKc_GRK3 Catalytic do 96.9 0.00031 6.7E-09 72.1 0.5 76 676-758 171-254 (279)
374 PTZ00036 glycogen synthase kin 96.9 0.00064 1.4E-08 74.5 3.0 82 677-758 247-350 (440)
375 cd05623 STKc_MRCK_alpha Cataly 96.8 0.00088 1.9E-08 70.7 3.9 79 677-759 184-266 (332)
376 cd05596 STKc_ROCK Catalytic do 96.8 0.00049 1.1E-08 73.7 1.8 26 677-702 223-248 (370)
377 cd05597 STKc_DMPK_like Catalyt 96.8 0.00087 1.9E-08 70.6 3.7 80 676-758 183-265 (331)
378 cd07857 STKc_MPK1 Catalytic do 96.8 0.0003 6.5E-09 74.3 0.0 82 677-758 186-291 (332)
379 cd07871 STKc_PCTAIRE3 Catalyti 96.8 0.00081 1.8E-08 69.3 3.3 26 676-701 179-204 (288)
380 KOG1094 Discoidin domain recep 96.8 0.0012 2.5E-08 70.0 3.8 91 671-763 709-804 (807)
381 cd05576 STKc_RPK118_like Catal 96.7 0.00066 1.4E-08 67.7 1.7 71 675-756 156-226 (237)
382 cd05613 STKc_MSK1_N N-terminal 96.7 0.00039 8.6E-09 71.7 -0.4 68 678-751 185-255 (290)
383 cd05598 STKc_LATS Catalytic do 96.6 0.00095 2.1E-08 71.8 2.3 33 670-702 213-245 (376)
384 KOG2739 Leucine-rich acidic nu 96.6 0.001 2.2E-08 63.8 2.2 84 75-163 41-129 (260)
385 cd07880 STKc_p38gamma_MAPK12 C 96.6 0.00051 1.1E-08 72.8 0.2 26 677-702 192-217 (343)
386 KOG1947 Leucine rich repeat pr 96.6 0.00019 4.2E-09 80.2 -3.3 189 26-224 185-389 (482)
387 cd07877 STKc_p38alpha_MAPK14 C 96.6 0.0011 2.3E-08 70.4 2.2 25 677-701 194-218 (345)
388 cd05599 STKc_NDR_like Catalyti 96.5 0.0015 3.3E-08 69.9 3.0 33 670-702 208-240 (364)
389 cd05580 STKc_PKA Catalytic dom 96.5 0.00067 1.5E-08 70.0 0.1 74 671-751 168-241 (290)
390 cd05625 STKc_LATS1 Catalytic d 96.5 0.0018 3.8E-08 69.9 3.3 33 670-702 217-249 (382)
391 cd05624 STKc_MRCK_beta Catalyt 96.5 0.0025 5.4E-08 67.2 4.3 26 677-702 184-209 (331)
392 KOG0201 Serine/threonine prote 96.3 0.0038 8.2E-08 64.1 4.1 79 670-758 180-262 (467)
393 cd05627 STKc_NDR2 Catalytic do 96.2 0.0023 4.9E-08 68.4 2.1 32 670-701 205-236 (360)
394 KOG2123 Uncharacterized conser 96.2 0.00018 3.8E-09 68.9 -5.6 36 27-64 39-74 (388)
395 PHA03210 serine/threonine kina 96.2 0.0023 5.1E-08 71.4 2.2 30 671-700 338-367 (501)
396 cd05622 STKc_ROCK1 Catalytic d 96.2 0.0037 8.1E-08 66.9 3.6 26 677-702 223-248 (371)
397 cd05629 STKc_NDR_like_fungal C 96.1 0.0041 8.8E-08 66.9 3.7 32 670-701 217-248 (377)
398 cd05621 STKc_ROCK2 Catalytic d 96.1 0.005 1.1E-07 65.9 4.1 25 677-701 223-247 (370)
399 cd06653 STKc_MEKK3_like_1 Cata 96.1 0.0021 4.6E-08 65.2 1.0 32 671-702 179-210 (264)
400 KOG1947 Leucine rich repeat pr 96.1 0.00055 1.2E-08 76.5 -3.7 173 76-258 187-373 (482)
401 KOG4279 Serine/threonine prote 95.7 0.0053 1.1E-07 66.5 2.0 70 679-758 756-831 (1226)
402 KOG4645 MAPKKK (MAP kinase kin 95.6 0.0041 8.8E-08 72.4 0.9 21 681-701 1421-1441(1509)
403 KOG0195 Integrin-linked kinase 95.5 0.0072 1.6E-07 57.8 1.8 77 679-763 367-446 (448)
404 KOG0588 Serine/threonine prote 95.4 0.016 3.6E-07 62.7 4.5 65 680-758 191-262 (786)
405 KOG0983 Mitogen-activated prot 95.3 0.013 2.8E-07 56.5 3.0 73 678-756 271-346 (391)
406 cd00180 PKc Catalytic domain o 95.1 0.0088 1.9E-07 57.8 1.4 45 677-759 170-214 (215)
407 KOG1989 ARK protein kinase fam 95.0 0.021 4.6E-07 64.1 3.9 83 674-766 231-314 (738)
408 KOG0583 Serine/threonine prote 95.0 0.015 3.3E-07 61.4 2.7 66 679-757 201-273 (370)
409 KOG0591 NIMA (never in mitosis 95.0 0.02 4.3E-07 55.5 3.1 86 670-760 197-282 (375)
410 KOG0584 Serine/threonine prote 94.9 0.012 2.5E-07 63.4 1.5 68 676-758 218-295 (632)
411 KOG0671 LAMMER dual specificit 94.8 0.019 4E-07 58.2 2.4 35 665-699 273-307 (415)
412 KOG1006 Mitogen-activated prot 94.7 0.0074 1.6E-07 57.8 -0.4 78 678-757 246-325 (361)
413 KOG0575 Polo-like serine/threo 94.7 0.011 2.4E-07 63.5 0.7 79 671-758 188-268 (592)
414 KOG1035 eIF-2alpha kinase GCN2 94.5 0.016 3.5E-07 67.3 1.4 69 676-757 793-869 (1351)
415 KOG0578 p21-activated serine/t 94.4 0.024 5.3E-07 60.3 2.6 80 670-758 438-522 (550)
416 PF00560 LRR_1: Leucine Rich R 93.8 0.022 4.8E-07 32.3 0.4 11 298-308 3-13 (22)
417 KOG0694 Serine/threonine prote 93.6 0.022 4.8E-07 62.1 0.5 79 670-758 537-622 (694)
418 PF00560 LRR_1: Leucine Rich R 92.9 0.045 9.6E-07 31.0 0.7 19 273-292 2-20 (22)
419 PLN03224 probable serine/threo 92.8 0.099 2.1E-06 57.6 3.8 23 679-701 410-433 (507)
420 KOG0589 Serine/threonine prote 92.2 0.12 2.6E-06 54.5 3.4 83 670-759 175-258 (426)
421 smart00370 LRR Leucine-rich re 91.6 0.16 3.5E-06 30.1 2.1 22 29-50 2-23 (26)
422 smart00369 LRR_TYP Leucine-ric 91.6 0.16 3.5E-06 30.1 2.1 22 29-50 2-23 (26)
423 KOG0615 Serine/threonine prote 91.2 0.15 3.3E-06 52.3 2.8 76 680-758 360-436 (475)
424 KOG0593 Predicted protein kina 91.2 0.39 8.5E-06 47.4 5.3 86 671-757 171-282 (396)
425 KOG0667 Dual-specificity tyros 91.0 0.11 2.3E-06 56.7 1.5 35 665-700 352-386 (586)
426 smart00370 LRR Leucine-rich re 90.9 0.22 4.8E-06 29.5 2.3 22 77-99 2-23 (26)
427 smart00369 LRR_TYP Leucine-ric 90.9 0.22 4.8E-06 29.5 2.3 22 77-99 2-23 (26)
428 KOG2052 Activin A type IB rece 90.8 0.15 3.2E-06 53.0 2.3 86 680-765 405-505 (513)
429 KOG0592 3-phosphoinositide-dep 90.8 0.12 2.5E-06 55.1 1.6 79 670-758 256-337 (604)
430 KOG0473 Leucine-rich repeat pr 90.8 0.0067 1.4E-07 56.9 -6.6 86 48-137 37-122 (326)
431 KOG4308 LRR-containing protein 90.5 0.00099 2.2E-08 72.3 -14.4 38 295-332 262-303 (478)
432 KOG0579 Ste20-like serine/thre 90.0 0.2 4.2E-06 54.3 2.4 71 677-758 211-288 (1187)
433 smart00221 STYKc Protein kinas 90.0 0.085 1.8E-06 51.6 -0.2 27 675-701 174-200 (225)
434 KOG0595 Serine/threonine-prote 89.7 0.11 2.5E-06 53.2 0.4 33 670-702 183-215 (429)
435 KOG0032 Ca2+/calmodulin-depend 88.9 0.24 5.3E-06 52.5 2.2 81 671-758 208-292 (382)
436 KOG4308 LRR-containing protein 88.4 0.0031 6.8E-08 68.5 -12.6 135 127-261 145-304 (478)
437 PF13504 LRR_7: Leucine rich r 87.9 0.29 6.3E-06 25.6 1.0 10 79-88 3-12 (17)
438 KOG0661 MAPK related serine/th 87.8 0.3 6.4E-06 51.3 1.9 86 674-759 183-291 (538)
439 KOG0473 Leucine-rich repeat pr 87.8 0.031 6.8E-07 52.5 -4.6 62 532-595 61-122 (326)
440 KOG0984 Mitogen-activated prot 87.2 0.2 4.3E-06 46.6 0.2 26 677-702 228-253 (282)
441 KOG0580 Serine/threonine prote 86.5 0.42 9.1E-06 45.6 2.0 79 671-758 192-272 (281)
442 KOG4717 Serine/threonine prote 85.1 0.58 1.3E-05 49.6 2.4 78 680-764 198-277 (864)
443 KOG1151 Tousled-like protein k 84.4 0.53 1.2E-05 48.8 1.7 28 675-702 658-685 (775)
444 KOG3864 Uncharacterized conser 83.0 0.13 2.8E-06 47.7 -3.0 81 30-111 102-185 (221)
445 KOG0598 Ribosomal protein S6 k 82.5 0.51 1.1E-05 48.0 0.7 31 671-701 195-225 (357)
446 KOG0600 Cdc2-related protein k 81.4 2.5 5.3E-05 45.1 5.1 25 676-700 295-319 (560)
447 KOG0574 STE20-like serine/thre 80.0 1.4 2.9E-05 43.4 2.6 82 671-758 199-282 (502)
448 KOG0577 Serine/threonine prote 79.8 1.5 3.4E-05 47.4 3.1 78 675-757 199-276 (948)
449 KOG1266 Protein kinase [Signal 79.6 1.4 3.1E-05 44.2 2.7 81 668-758 249-330 (458)
450 KOG3864 Uncharacterized conser 78.7 0.25 5.5E-06 45.8 -2.6 35 54-88 102-136 (221)
451 KOG1027 Serine/threonine prote 77.8 1.7 3.8E-05 49.1 2.9 83 668-758 681-766 (903)
452 KOG4250 TANK binding protein k 76.0 1 2.2E-05 49.9 0.5 27 675-701 198-224 (732)
453 smart00365 LRR_SD22 Leucine-ri 75.0 2.6 5.6E-05 25.0 1.8 16 29-44 2-17 (26)
454 KOG0658 Glycogen synthase kina 73.6 2.2 4.8E-05 43.5 2.2 93 667-759 191-306 (364)
455 PF13516 LRR_6: Leucine Rich r 72.9 0.78 1.7E-05 26.4 -0.7 11 297-307 4-14 (24)
456 KOG0660 Mitogen-activated prot 69.5 1.7 3.6E-05 44.2 0.3 24 676-699 203-226 (359)
457 KOG0696 Serine/threonine prote 68.6 1.6 3.5E-05 45.0 0.0 24 679-702 528-551 (683)
458 KOG1290 Serine/threonine prote 67.2 3 6.6E-05 44.3 1.6 29 670-698 420-448 (590)
459 KOG0605 NDR and related serine 63.9 3 6.4E-05 44.8 0.8 31 671-701 358-388 (550)
460 KOG1167 Serine/threonine prote 63.6 3.1 6.7E-05 43.2 0.9 27 675-701 252-278 (418)
461 KOG0597 Serine-threonine prote 63.1 2.5 5.5E-05 45.7 0.2 32 670-701 169-200 (808)
462 KOG0033 Ca2+/calmodulin-depend 62.0 3.6 7.8E-05 39.6 0.9 32 670-701 181-212 (355)
463 KOG1345 Serine/threonine kinas 60.3 3 6.5E-05 40.8 0.1 27 676-702 200-226 (378)
464 KOG0695 Serine/threonine prote 59.8 2.9 6.3E-05 41.8 -0.1 27 680-706 430-456 (593)
465 KOG4242 Predicted myosin-I-bin 59.1 23 0.00049 37.8 6.1 36 297-332 415-453 (553)
466 KOG0599 Phosphorylase kinase g 57.6 3.7 8E-05 40.1 0.2 77 678-758 205-282 (411)
467 KOG0587 Traf2- and Nck-interac 56.3 9.3 0.0002 43.9 3.1 77 677-758 204-281 (953)
468 KOG0608 Warts/lats-like serine 56.0 4.5 9.8E-05 44.5 0.6 31 671-701 841-871 (1034)
469 KOG3653 Transforming growth fa 55.2 7.3 0.00016 41.4 1.9 86 680-766 403-506 (534)
470 KOG1033 eIF-2alpha kinase PEK/ 54.8 5.6 0.00012 42.8 1.0 23 674-696 435-457 (516)
471 KOG0585 Ca2+/calmodulin-depend 54.5 6.3 0.00014 41.9 1.3 77 678-759 296-372 (576)
472 KOG0594 Protein kinase PCTAIRE 53.1 7.2 0.00016 39.7 1.4 83 677-759 197-302 (323)
473 KOG0616 cAMP-dependent protein 53.0 4.7 0.0001 40.1 0.1 31 671-701 211-241 (355)
474 smart00364 LRR_BAC Leucine-ric 51.3 9.6 0.00021 22.6 1.2 12 538-549 4-15 (26)
475 KOG0665 Jun-N-terminal kinase 50.2 5.6 0.00012 40.0 0.2 32 667-698 183-214 (369)
476 KOG0590 Checkpoint kinase and 49.9 10 0.00022 43.2 2.1 83 680-764 504-592 (601)
477 smart00368 LRR_RI Leucine rich 49.7 14 0.0003 22.3 1.8 14 295-308 2-15 (28)
478 KOG0663 Protein kinase PITSLRE 46.8 6.5 0.00014 39.8 0.0 24 676-699 253-276 (419)
479 KOG0610 Putative serine/threon 43.7 7 0.00015 40.8 -0.3 25 677-701 311-335 (459)
480 KOG0604 MAP kinase-activated p 43.7 31 0.00068 34.6 4.1 78 676-758 238-321 (400)
481 KOG0668 Casein kinase II, alph 41.4 7.8 0.00017 37.0 -0.3 21 681-701 213-233 (338)
482 KOG0607 MAP kinase-interacting 39.8 10 0.00022 38.2 0.1 27 675-701 265-291 (463)
483 KOG0611 Predicted serine/threo 37.4 25 0.00055 36.6 2.5 23 680-702 232-254 (668)
484 KOG0659 Cdk activating kinase 36.2 23 0.00049 34.9 1.8 29 670-698 170-199 (318)
485 KOG0669 Cyclin T-dependent kin 36.2 42 0.0009 32.8 3.5 25 676-700 204-228 (376)
486 KOG1240 Protein kinase contain 35.0 20 0.00043 42.7 1.5 68 678-759 215-291 (1431)
487 PF05953 Allatostatin: Allatos 33.1 16 0.00034 16.8 0.1 8 682-689 3-10 (11)
488 KOG4242 Predicted myosin-I-bin 32.7 1E+02 0.0023 33.1 6.0 274 102-378 165-479 (553)
489 KOG0614 cGMP-dependent protein 31.9 13 0.00027 40.0 -0.6 33 670-702 583-620 (732)
490 PF14531 Kinase-like: Kinase-l 29.9 26 0.00056 35.5 1.2 31 676-706 225-255 (288)
491 COG4248 Uncharacterized protei 27.3 1.2E+02 0.0026 32.4 5.3 26 677-702 197-223 (637)
492 PF15574 Imm28: Immunity prote 25.2 61 0.0013 27.5 2.3 64 684-759 31-95 (123)
493 smart00367 LRR_CC Leucine-rich 24.8 52 0.0011 19.2 1.4 12 295-306 2-13 (26)
494 KOG3763 mRNA export factor TAP 24.6 34 0.00073 37.4 1.0 14 246-259 217-230 (585)
495 KOG0986 G protein-coupled rece 24.3 30 0.00065 36.8 0.5 32 670-701 355-386 (591)
496 KOG3763 mRNA export factor TAP 22.7 45 0.00098 36.5 1.5 66 26-91 215-284 (585)
497 TIGR00864 PCC polycystin catio 21.6 59 0.0013 43.1 2.4 30 11-40 1-30 (2740)
498 KOG0670 U4/U6-associated splic 20.9 34 0.00073 37.1 0.1 29 671-699 605-633 (752)
499 TIGR00864 PCC polycystin catio 20.6 67 0.0014 42.7 2.5 32 59-90 1-32 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.3e-72 Score=677.03 Aligned_cols=521 Identities=38% Similarity=0.608 Sum_probs=323.5
Q ss_pred CCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEE
Q 003931 53 PSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLR 132 (785)
Q Consensus 53 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 132 (785)
.+++.|++++|.+++..+..|..+++|++|++++|.+.+.+|..+|..+++|++|+|++|.+++..|. ..+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 35566666666665555555666666666666666665556655555666666666666666554443 3455666666
Q ss_pred cCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeecccccccc
Q 003931 133 LATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSG 212 (785)
Q Consensus 133 L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~ 212 (785)
+++|.+.+..|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+|..++.+++|++|++++|.+++
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 66666665556556666666666666666655566666666666666666666665566666666666666666666665
Q ss_pred CCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhcc
Q 003931 213 GLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIE 292 (785)
Q Consensus 213 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 292 (785)
.+|..++++++|++|++++|.+.+.+|.. ++++++|++|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+.
T Consensus 227 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~ 305 (968)
T PLN00113 227 EIPYEIGGLTSLNHLDLVYNNLTGPIPSS-LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI 305 (968)
T ss_pred cCChhHhcCCCCCEEECcCceeccccChh-HhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHc
Confidence 66666666666666666666665555544 55666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEE
Q 003931 293 KLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKF 372 (785)
Q Consensus 293 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l 372 (785)
++++|+.|++++|.+++..|..+..+++|+.|++++|.+++.+|..++.+++|+.+++++|.+.+.+|..+..+.+++.+
T Consensus 306 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L 385 (968)
T PLN00113 306 QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL 385 (968)
T ss_pred CCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEE
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred EecCccccccCCcccccCCCCccEEEcccccceecCCccccCCCCCcEEEccCCCCcccCCccccCCCCCcEEEcccCcc
Q 003931 373 SVFTNNFSGSIPGDFGKFSPSLINVSFSNNSFSGELPHELCSGFALEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQF 452 (785)
Q Consensus 373 ~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l 452 (785)
++++|++.+.+|..+..+. +|+.+++++|++++..|..+..++.|+.+++++|.+.+.++..+..+++|+.|++++|++
T Consensus 386 ~l~~n~l~~~~p~~~~~~~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 386 ILFSNSLEGEIPKSLGACR-SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKF 464 (968)
T ss_pred ECcCCEecccCCHHHhCCC-CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCcee
Confidence 6666666666665555544 666666666666666666666666666666666666666666566666666666666666
Q ss_pred ccccCcccCCCCCCcEEEccCCeeeeecccchhcccccceeccccceeeeccCcchhccccCCeeecccCccccCCCccc
Q 003931 453 TGNITKAFGVHPRLDFIRLSGNQFVGEISPDWGECRNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDL 532 (785)
Q Consensus 453 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l 532 (785)
.+..|..++ .++|+.|++++|++.+..|..+..+++|+.|++++|.+.+.+|..+.++++|+.|++++|.+++.+|..+
T Consensus 465 ~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 543 (968)
T PLN00113 465 FGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASF 543 (968)
T ss_pred eeecCcccc-cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhH
Confidence 655555442 3566666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccCCCCCeecccCCcccCcCCcccccCCCCCeEecCCCcCccCCCc
Q 003931 533 GKLVKLFNLNLSNNHLTGEIPKSISNLTELAYLDLSNNKLTGDVPQ 578 (785)
Q Consensus 533 ~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 578 (785)
+.+++|+.|++++|++++.+|..+..+++|+++++++|++.+.+|.
T Consensus 544 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 544 SEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred hCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCC
Confidence 6666666666666666666666666666666666666666665553
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.8e-60 Score=567.51 Aligned_cols=521 Identities=38% Similarity=0.634 Sum_probs=495.4
Q ss_pred CCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCcccc-CCCCCcEEEcCCCcccccCCcCCCCCCCCCEE
Q 003931 77 RNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVS-KLSNLIDLRLATNKFSGPIPGDIGSMSNLQLV 155 (785)
Q Consensus 77 ~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L 155 (785)
.+++.|++++|.+++.++.. |..+++|++|+|++|.+.+.+|..+. .+++|++|++++|.+++.+|. +.+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~-~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSA-IFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChH-HhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEE
Confidence 57999999999999877654 58999999999999999987777654 999999999999999988774 568999999
Q ss_pred EcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCc
Q 003931 156 ELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLS 235 (785)
Q Consensus 156 ~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 235 (785)
++++|.+.+..|..++.+++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+.
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccC
Q 003931 236 GEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTL 315 (785)
Q Consensus 236 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l 315 (785)
+.+|.. ++++++|++|++++|.+.+.+|..++.+++|++|++++|.+++.+|.++.++++|+.|++++|.+.+.+|..+
T Consensus 226 ~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~ 304 (968)
T PLN00113 226 GEIPYE-IGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304 (968)
T ss_pred CcCChh-HhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH
Confidence 888887 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCEEEcccccccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCccccccCCcccccCCCCcc
Q 003931 316 WNLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLI 395 (785)
Q Consensus 316 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~ 395 (785)
.++++|+.|++++|.+++..|..+..+++|+.|++++|.+.+.+|..+..+.+|+.+++++|++++.+|..+.... +++
T Consensus 305 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~-~L~ 383 (968)
T PLN00113 305 IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSG-NLF 383 (968)
T ss_pred cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998887765 899
Q ss_pred EEEcccccceecCCccccCCCCCcEEEccCCCCcccCCccccCCCCCcEEEcccCccccccCcccCCCCCCcEEEccCCe
Q 003931 396 NVSFSNNSFSGELPHELCSGFALEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQFTGNITKAFGVHPRLDFIRLSGNQ 475 (785)
Q Consensus 396 ~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~ 475 (785)
.+++++|++.+.+|..+..+.+|+.|++++|.+++..|..+..++.|+.+++++|.+.+..+..+..+++|+.|++++|.
T Consensus 384 ~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 463 (968)
T PLN00113 384 KLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNK 463 (968)
T ss_pred EEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCce
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred eeeecccchhcccccceeccccceeeeccCcchhccccCCeeecccCccccCCCcccccCCCCCeecccCCcccCcCCcc
Q 003931 476 FVGEISPDWGECRNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNNHLTGEIPKS 555 (785)
Q Consensus 476 l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~ 555 (785)
+.+.+|..+ ..++|+.|++++|++++..|..+.++++|+.|++++|++.+.+|..+..+++|++|++++|.+++.+|..
T Consensus 464 ~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 542 (968)
T PLN00113 464 FFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPAS 542 (968)
T ss_pred eeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChh
Confidence 998888765 4689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCeEecCCCcCccCCCccccccCCCcEEeCCCCcCcccCCcc
Q 003931 556 ISNLTELAYLDLSNNKLTGDVPQELGRFDKLLSLNLSHNDLSGEIPSN 603 (785)
Q Consensus 556 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 603 (785)
+..+++|+.|++++|++++.+|..+..++.|+.+++++|++.+.+|..
T Consensus 543 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 590 (968)
T PLN00113 543 FSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590 (968)
T ss_pred HhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc
Confidence 999999999999999999999999999999999999999999988853
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-40 Score=332.12 Aligned_cols=389 Identities=25% Similarity=0.293 Sum_probs=325.3
Q ss_pred CcEEEccCCCCCCCccccccCC--CCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEEC
Q 003931 7 LQYLSVYDNNLNGAIPFQLSSL--RKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDL 84 (785)
Q Consensus 7 L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 84 (785)
-+.|+.+++.+..+....+.++ ..-++|++++|++..++...|.++++|+.+++..|.++ .+|.......+|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 3567778877765544444333 34566999999999999888999999999999999887 56776666778999999
Q ss_pred CCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccc
Q 003931 85 SLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTG 164 (785)
Q Consensus 85 s~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~ 164 (785)
.+|.|+ .+...-+..++.|+.||||.|.|+.+....|..-.++++|+|++|+|+....+.|.++.+|.+|.|+.|+++.
T Consensus 133 ~~N~I~-sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 133 RHNLIS-SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred eccccc-cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc
Confidence 999988 5555555888999999999999997777888888899999999999998888889999999999999999998
Q ss_pred cCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccC
Q 003931 165 QIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIG 244 (785)
Q Consensus 165 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 244 (785)
..+..|.++++|+.|+|..|+|...-.-.|.++++|+.|.+..|.|.......|..+.++++|+|+.|+++ .+...++.
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~-~vn~g~lf 290 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ-AVNEGWLF 290 (873)
T ss_pred cCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh-hhhccccc
Confidence 77788888999999999999987555667889999999999999998888888999999999999999998 56666688
Q ss_pred CCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEE
Q 003931 245 NWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSL 324 (785)
Q Consensus 245 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 324 (785)
+++.|+.|++++|.|....++++..+++|++|+|++|+++...+.+|..+..|++|+|++|.+...-..+|..+.+|++|
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~L 370 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKL 370 (873)
T ss_pred ccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhh
Confidence 89999999999999998888888899999999999999998888889999999999999999987777788889999999
Q ss_pred EcccccccCCCCC---CCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCccccccCCcccccCCCCccEEEcc
Q 003931 325 QLFSNNLSGTIPP---EIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLINVSFS 400 (785)
Q Consensus 325 ~L~~n~l~~~~p~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~ 400 (785)
||++|.+++.+.+ .|.++++|+.|++.+|++.......|..+..|+.|++.+|.+...-|.+|..+ .|++|.+.
T Consensus 371 dLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m--~Lk~Lv~n 447 (873)
T KOG4194|consen 371 DLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM--ELKELVMN 447 (873)
T ss_pred cCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc--hhhhhhhc
Confidence 9999998876654 36678889999999999887777788888888888888888887777777665 56666544
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=332.27 Aligned_cols=369 Identities=22% Similarity=0.231 Sum_probs=337.1
Q ss_pred CCCcEEEccCCCCCCCccccccCCCCCCEEeCCCCCCCCCCccccCC-CCCCcEEEccCCCCcccCCccCCCCCCccEEE
Q 003931 5 SELQYLSVYDNNLNGAIPFQLSSLRKVRYLDLGGNFLETPDWSKFSS-MPSLTHLGLYLNELTLEFPSFILTCRNLTYLD 83 (785)
Q Consensus 5 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~-l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 83 (785)
+..++|++++|.+..+-+..|.++++|+.+++.+|.++.|+. |.. ..+|+.|+|.+|.|+.+..+.+..++.|+.||
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~--f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslD 155 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPR--FGHESGHLEKLDLRHNLISSVTSEELSALPALRSLD 155 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhccc--ccccccceeEEeeeccccccccHHHHHhHhhhhhhh
Confidence 356789999999999988889999999999999999998873 544 45699999999999999999999999999999
Q ss_pred CCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCccc
Q 003931 84 LSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFT 163 (785)
Q Consensus 84 Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~ 163 (785)
||.|.|+ .+|...|..-.++++|+|++|.|+....+.|..+.+|..|.|+.|+++...+..|..+++|+.|+|..|++.
T Consensus 156 LSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir 234 (873)
T KOG4194|consen 156 LSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR 234 (873)
T ss_pred hhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee
Confidence 9999998 789888898899999999999999999999999999999999999999888889999999999999999998
Q ss_pred ccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCcccc
Q 003931 164 GQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLI 243 (785)
Q Consensus 164 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 243 (785)
-.--.+|.++++|+.|.+..|.+.......|..+.++++|+|+.|+++..-..++.++++|+.|++++|.|. .+..+..
T Consensus 235 ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~-rih~d~W 313 (873)
T KOG4194|consen 235 IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ-RIHIDSW 313 (873)
T ss_pred eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhh-eeecchh
Confidence 555678999999999999999999888889999999999999999999888889999999999999999998 5544446
Q ss_pred CCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCC---ccCcCCCC
Q 003931 244 GNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIP---PTLWNLTN 320 (785)
Q Consensus 244 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p---~~l~~l~~ 320 (785)
+.+++|+.|+|++|+++...+.+|..+.+|++|+|++|.++.....+|..+++|+.|||++|.++..+. ..|.+++.
T Consensus 314 sftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~ 393 (873)
T KOG4194|consen 314 SFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPS 393 (873)
T ss_pred hhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchh
Confidence 778999999999999999888999999999999999999998878889999999999999999987654 34888999
Q ss_pred CCEEEcccccccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCcc
Q 003931 321 LLSLQLFSNNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNN 378 (785)
Q Consensus 321 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 378 (785)
|+.|++.+|++..+...+|.++++|+.||+.+|.+...-|..|..+ .|++|.+..-.
T Consensus 394 LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 394 LRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred hhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccc
Confidence 9999999999997777899999999999999999999999999998 88888765433
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=5.4e-42 Score=332.60 Aligned_cols=476 Identities=27% Similarity=0.388 Sum_probs=235.0
Q ss_pred CccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEc
Q 003931 78 NLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVEL 157 (785)
Q Consensus 78 ~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L 157 (785)
.|+.+.+++|.+. .+.+++ .++..|.+|++.+|++. ..|.+++.+..++.++.++|+++ .+|+.++++.+|+.++.
T Consensus 46 ~l~~lils~N~l~-~l~~dl-~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDL-KNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred chhhhhhccCchh-hccHhh-hcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 3444444444444 233333 44444444444444444 33444444444444444444444 34444444444444444
Q ss_pred ccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccc
Q 003931 158 FNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGE 237 (785)
Q Consensus 158 ~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 237 (785)
++|.+. ..|++++.+..+..++..+|+++ ..|+.++.+.++..+++.+|++....|..+. ++.|++|+...|.+. .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 444444 23334444444444444444444 3444444444444444444444433222222 444444444444443 4
Q ss_pred cCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhcc-CCCCCCEEECcCCcccccCCccCc
Q 003931 238 ISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIE-KLTSLENLDLSGNQLSGTIPPTLW 316 (785)
Q Consensus 238 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~ 316 (785)
+|++ ++.+.+|+-|++..|++. ..| +|..|+.|+++.+..|.+. .+|++.. +++++..||+.+|+++ ..|+.+.
T Consensus 198 lP~~-lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 198 LPPE-LGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred CChh-hcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 4444 444444444444444444 233 4444444555555444444 3333332 4444445555555544 3444444
Q ss_pred CCCCCCEEEcccccccCCCCCCCCCCCCCCEEEccCCcCccccCccccc-----cCCCcEE----EecCc---cc-cccC
Q 003931 317 NLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISR-----LVKLNKF----SVFTN---NF-SGSI 383 (785)
Q Consensus 317 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----l~~L~~l----~l~~n---~l-~~~~ 383 (785)
-+.+|..||+++|.++ ..|.+++++ .|+.|.+.+|.+...-.+-+.. ++.|+.- .++.- .- .+..
T Consensus 273 lLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~ 350 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTL 350 (565)
T ss_pred HhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCC
Confidence 4444445555555444 334444444 4444444444443110000000 0000000 00000 00 0000
Q ss_pred C-cccc--cCCCCccEEEcccccceecCCccccCCCC---CcEEEccCCCCcccCCccccCCCCCcEEEcccCccccccC
Q 003931 384 P-GDFG--KFSPSLINVSFSNNSFSGELPHELCSGFA---LEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQFTGNIT 457 (785)
Q Consensus 384 ~-~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~---L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 457 (785)
| ..+. ....+.+.|++++-+++ .+|...+.... .+.++++.|++. .+|..+..+..+.+.-+..|+..+.++
T Consensus 351 ~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~ 428 (565)
T KOG0472|consen 351 PSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVP 428 (565)
T ss_pred CCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccch
Confidence 0 0000 00113445555555555 33443333222 566667777666 344444444333333333333334566
Q ss_pred cccCCCCCCcEEEccCCeeeeecccchhcccccceeccccceeeeccCcchhccccCCeeecccCccccCCCcccccCCC
Q 003931 458 KAFGVHPRLDFIRLSGNQFVGEISPDWGECRNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVK 537 (785)
Q Consensus 458 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~ 537 (785)
..+..+++|+.|++++|-+. .+|..++.+..|+.++++.|++. ..|..+..+..++.+-.++|++....|..+.++.+
T Consensus 429 ~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~n 506 (565)
T KOG0472|consen 429 LELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRN 506 (565)
T ss_pred HHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhh
Confidence 66677777777777777665 55667777777888888887776 56766666666776666777777655556777788
Q ss_pred CCeecccCCcccCcCCcccccCCCCCeEecCCCcCc
Q 003931 538 LFNLNLSNNHLTGEIPKSISNLTELAYLDLSNNKLT 573 (785)
Q Consensus 538 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 573 (785)
|..||+.+|.+. .+|..++++++|++|++++|.+.
T Consensus 507 L~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 507 LTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 888888888777 67777888888888888888776
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.1e-41 Score=327.36 Aligned_cols=458 Identities=30% Similarity=0.438 Sum_probs=297.8
Q ss_pred ccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCC
Q 003931 170 LGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTEL 249 (785)
Q Consensus 170 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L 249 (785)
+.++..|.+|++.+|++. ..|++++.+..++.++.++|+++ .+|..++++.+|..+++++|.+. +++++ ++.+..+
T Consensus 64 l~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~-i~~~~~l 139 (565)
T KOG0472|consen 64 LKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDS-IGRLLDL 139 (565)
T ss_pred hhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCch-HHHHhhh
Confidence 344444444444444443 34444444445555555555544 44455555555555555555555 44444 5556666
Q ss_pred CEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccc
Q 003931 250 ESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSN 329 (785)
Q Consensus 250 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 329 (785)
+.++..+|+++ ..|.++..+.+|..+++.+|++....|..+. ++.|++||.-.|-+. .+|+.++.+.+|..|++..|
T Consensus 140 ~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~N 216 (565)
T KOG0472|consen 140 EDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRN 216 (565)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhc
Confidence 66666666665 4556666677777777777777644443333 777777777777666 56667777777777777777
Q ss_pred cccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCccccccCCcccccCCCCccEEEcccccceecCC
Q 003931 330 NLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLINVSFSNNSFSGELP 409 (785)
Q Consensus 330 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 409 (785)
++. ..| +|.+|..|.++.++.|++. .+ |++..+..+++..||+.+|++. +.|
T Consensus 217 ki~-~lP-ef~gcs~L~Elh~g~N~i~-~l------------------------pae~~~~L~~l~vLDLRdNklk-e~P 268 (565)
T KOG0472|consen 217 KIR-FLP-EFPGCSLLKELHVGENQIE-ML------------------------PAEHLKHLNSLLVLDLRDNKLK-EVP 268 (565)
T ss_pred ccc-cCC-CCCccHHHHHHHhcccHHH-hh------------------------HHHHhcccccceeeeccccccc-cCc
Confidence 776 444 6677777777777766665 22 2222222234555555555554 456
Q ss_pred ccccCCCCCcEEEccCCCCcccCCccccCCCCCcEEEcccCccccccCcccCCCC--CCcEE-------EccCCee----
Q 003931 410 HELCSGFALEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQFTGNITKAFGVHP--RLDFI-------RLSGNQF---- 476 (785)
Q Consensus 410 ~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~--~L~~L-------~Ls~n~l---- 476 (785)
.++|-+.+|++||+++|.+++ .|..++++ .|+.|.+.||.+.++-.+.+..-+ -|++| .++...-
T Consensus 269 de~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~ 346 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTET 346 (565)
T ss_pred hHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccc
Confidence 667777777777777777763 45667777 777777777766543221111100 01111 0111000
Q ss_pred ----eeecccchhcccccceeccccceeeeccCcchhcccc---CCeeecccCccccCCCcccccCCCCCeecccCCccc
Q 003931 477 ----VGEISPDWGECRNLSNLQLDRNRISGGIPAELGNLTR---LGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNNHLT 549 (785)
Q Consensus 477 ----~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~---L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~ 549 (785)
....-+......+.+.|++++-+++ .+|+....... ....+++.|++. .+|..+..+..+.+.-+..|+..
T Consensus 347 ~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 347 AMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred cCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 0011122344567788888888887 45555444333 778899999998 67777777776665444444444
Q ss_pred CcCCcccccCCCCCeEecCCCcCccCCCccccccCCCcEEeCCCCcCcccCCcccchhhhhhheeecccccCCCCCCccc
Q 003931 550 GEIPKSISNLTELAYLDLSNNKLTGDVPQELGRFDKLLSLNLSHNDLSGEIPSNLGNLFVLQYMLDLSSNSLSGTIPQEL 629 (785)
Q Consensus 550 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~~~l~ls~n~l~~~~~~~~ 629 (785)
+.+|..++.++.|+.|++++|-+. .+|..++.+..|+.+|+|.|++. .+|..+..+..++. +-.+.|++....|..+
T Consensus 425 sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEt-llas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 425 SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLET-LLASNNQIGSVDPSGL 501 (565)
T ss_pred ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHH-HHhccccccccChHHh
Confidence 578888999999999999998887 68889999999999999999987 77887777776664 5566789988888889
Q ss_pred ccCCCCceEeccCCceeeecCCcccccccceeeecCCCchh
Q 003931 630 GKLTSLEILNLSRNQLSGRIPASLSSMISLRSVDFSDNELT 670 (785)
Q Consensus 630 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~l~l~~n~l~ 670 (785)
+.+.+|..||+.+|.+. .+|..+++++++++|++++|+|+
T Consensus 502 ~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99999999999999997 67888999999999999999987
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=332.74 Aligned_cols=508 Identities=29% Similarity=0.350 Sum_probs=368.2
Q ss_pred EEEccCCCCCCCccccccCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCC
Q 003931 9 YLSVYDNNLNGAIPFQLSSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNK 88 (785)
Q Consensus 9 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 88 (785)
.+|++.+++.- +|..+-....+..|+++.|.+...+.+...+...|++|++++|.+. ..|..+..+.+|+.|+++.|.
T Consensus 2 ~vd~s~~~l~~-ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 2 HVDASDEQLEL-IPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred CcccccccCcc-cchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 36777777774 4444544455999999999877666555666777999999999886 678888899999999999999
Q ss_pred CcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCc
Q 003931 89 LSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPS 168 (785)
Q Consensus 89 i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~ 168 (785)
|. ..|... .++.+|++++|.+|.+. ..|..+..+++|++|+++.|.+. .+|.-+..++.++.+..++|....
T Consensus 80 i~-~vp~s~-~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~---- 151 (1081)
T KOG0618|consen 80 IR-SVPSSC-SNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ---- 151 (1081)
T ss_pred Hh-hCchhh-hhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh----
Confidence 98 678666 88999999999999887 78899999999999999999998 678888899999999999993322
Q ss_pred cccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCC
Q 003931 169 SLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTE 248 (785)
Q Consensus 169 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 248 (785)
.++... ++++++..|.+.+.++..+..++. .+++..|.+. ...+..+.+|+.+....|++.. + .-.-++
T Consensus 152 ~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~-l----~~~g~~ 220 (1081)
T KOG0618|consen 152 RLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSE-L----EISGPS 220 (1081)
T ss_pred hhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccce-E----EecCcc
Confidence 233333 889999999998888888877766 7999999887 2457788999999999999873 2 223578
Q ss_pred CCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEccc
Q 003931 249 LESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFS 328 (785)
Q Consensus 249 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 328 (785)
|+.|+.++|.+....+. ....+|+++++++|+++ .+|+|++.+.+|+.++..+|+++ .+|..+....+|+.|.+..
T Consensus 221 l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~ 296 (1081)
T KOG0618|consen 221 LTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAY 296 (1081)
T ss_pred hheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhh
Confidence 99999999998844332 23468999999999998 46799999999999999999996 7788888999999999999
Q ss_pred ccccCCCCCCCCCCCCCCEEEccCCcCccccCccc-cccCCCcEEEecCccccccCCcccccCCCCccEEEcccccceec
Q 003931 329 NNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENI-SRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLINVSFSNNSFSGE 407 (785)
Q Consensus 329 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 407 (785)
|.+. .+|+....+..|++||+..|++. .+|+.+ ..... ++..+..+.|++...
T Consensus 297 nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~------------------------~l~~ln~s~n~l~~l 350 (1081)
T KOG0618|consen 297 NELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNA------------------------SLNTLNVSSNKLSTL 350 (1081)
T ss_pred hhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhH------------------------HHHHHhhhhcccccc
Confidence 9998 77788888999999999999887 344322 11111 123333333333321
Q ss_pred CCccccCCCCCcEEEccCCCCcccCCccccCCCCCcEEEcccCccccccCcccCCCCCCcEEEccCCeeeeecccchhcc
Q 003931 408 LPHELCSGFALEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQFTGNITKAFGVHPRLDFIRLSGNQFVGEISPDWGEC 487 (785)
Q Consensus 408 ~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 487 (785)
....-.....|+.|.+.+|.++......+.+..+|+.|++++|++.......+.++..|+.|+||+|+++ .+|.....|
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~ 429 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANL 429 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhh
Confidence 1111122335666777777777666666667777777777777776666666666777777777777776 344666777
Q ss_pred cccceeccccceeeeccCcchhccccCCeeecccCccccCCCcccccCCCCCeecccCCcccCcCCcccccCCCCCeEec
Q 003931 488 RNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNNHLTGEIPKSISNLTELAYLDL 567 (785)
Q Consensus 488 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L 567 (785)
+.|++|...+|++. ..| .+..++.|+.+|+|.|+++...-..-..-++|++||+++|.-....-..|..+..+...++
T Consensus 430 ~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i 507 (1081)
T KOG0618|consen 430 GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDI 507 (1081)
T ss_pred hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheec
Confidence 77777777777776 445 6667777777777777775432211112256777777777633233334444555555554
Q ss_pred CCC
Q 003931 568 SNN 570 (785)
Q Consensus 568 s~n 570 (785)
.-+
T Consensus 508 ~~~ 510 (1081)
T KOG0618|consen 508 TLN 510 (1081)
T ss_pred ccC
Confidence 443
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-37 Score=327.58 Aligned_cols=507 Identities=26% Similarity=0.329 Sum_probs=357.9
Q ss_pred EEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCC
Q 003931 33 YLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTEN 112 (785)
Q Consensus 33 ~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n 112 (785)
.+|++.+.+..|+...+..-. ++.|+++.|.+...+.+.+.+.-+|+.|++++|.+. ..|..+ ..+.+|+.|+++.|
T Consensus 2 ~vd~s~~~l~~ip~~i~~~~~-~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~i-t~l~~L~~ln~s~n 78 (1081)
T KOG0618|consen 2 HVDASDEQLELIPEQILNNEA-LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQI-TLLSHLRQLNLSRN 78 (1081)
T ss_pred CcccccccCcccchhhccHHH-HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchh-hhHHHHhhcccchh
Confidence 367777777777766555444 888888888876655566666767999999999887 678776 78888899999988
Q ss_pred CCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCc
Q 003931 113 QFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPP 192 (785)
Q Consensus 113 ~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 192 (785)
.|. ..|....++.+|+++.|..|.+. ..|..+..+++|+.|++++|.+. .+|..+..+..+.++..++|.....
T Consensus 79 ~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~--- 152 (1081)
T KOG0618|consen 79 YIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR--- 152 (1081)
T ss_pred hHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh---
Confidence 888 56677888888888888888887 67888888888888888888887 6677788888888888888832212
Q ss_pred cccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCC
Q 003931 193 ELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTK 272 (785)
Q Consensus 193 ~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 272 (785)
++... ++.+++..|.+.+.++.++..++. .|+|++|.+. ... +.++.+|+.+....|++....- .-++
T Consensus 153 -lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~d---ls~~~~l~~l~c~rn~ls~l~~----~g~~ 220 (1081)
T KOG0618|consen 153 -LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLD---LSNLANLEVLHCERNQLSELEI----SGPS 220 (1081)
T ss_pred -hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-hhh---hhhccchhhhhhhhcccceEEe----cCcc
Confidence 22222 777788888887777777766665 6888888875 222 5667778888877777664321 2367
Q ss_pred CcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCCCCCCCCCCCCCCEEEccC
Q 003931 273 LQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFDVNT 352 (785)
Q Consensus 273 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 352 (785)
|+.|+.++|.++...+. ..-.+|+++|+++|+++ .+|++++.+.+|+.++..+|.++ .+|..+....+|+.+++..
T Consensus 221 l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~ 296 (1081)
T KOG0618|consen 221 LTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAY 296 (1081)
T ss_pred hheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhh
Confidence 77777777777633322 12356777777777777 44577777777777777777775 5666666667777777777
Q ss_pred CcCccccCccccccCCCcEEEecCccccccCCcccccCCCCccEEEcccccceecCCccccCCC-CCcEEEccCCCCccc
Q 003931 353 NQLHGELPENISRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLINVSFSNNSFSGELPHELCSGF-ALEELTVNGNNFTGS 431 (785)
Q Consensus 353 n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~-~L~~L~l~~n~~~~~ 431 (785)
|.+. -+|.....++.|+.|++ ..|++....+..+.... .+..+..+.|.+...
T Consensus 297 nel~-yip~~le~~~sL~tLdL-------------------------~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l 350 (1081)
T KOG0618|consen 297 NELE-YIPPFLEGLKSLRTLDL-------------------------QSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL 350 (1081)
T ss_pred hhhh-hCCCcccccceeeeeee-------------------------hhccccccchHHHhhhhHHHHHHhhhhcccccc
Confidence 7665 33444444444444444 44444422222222222 255666666666543
Q ss_pred CCccccCCCCCcEEEcccCccccccCcccCCCCCCcEEEccCCeeeeecccchhcccccceeccccceeeeccCcchhcc
Q 003931 432 LPACLRNCSNLNRVRFDGNQFTGNITKAFGVHPRLDFIRLSGNQFVGEISPDWGECRNLSNLQLDRNRISGGIPAELGNL 511 (785)
Q Consensus 432 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 511 (785)
....=...+.|+.|++.+|.++......+.++++|+.|+|++|++.......+.++..|+.|+||+|+++ .+|..+..+
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~ 429 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANL 429 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhh
Confidence 3222233567888899999998888888888899999999999888777777888889999999999988 567888889
Q ss_pred ccCCeeecccCccccCCCcccccCCCCCeecccCCcccCc-CCcccccCCCCCeEecCCCcCccCCCccccccCCCcEEe
Q 003931 512 TRLGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNNHLTGE-IPKSISNLTELAYLDLSNNKLTGDVPQELGRFDKLLSLN 590 (785)
Q Consensus 512 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 590 (785)
..|++|...+|++. ..| .+..++.|+.+|+|.|+++.. +|....+ ++|++||+++|.-....-..|..++.+...+
T Consensus 430 ~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~ 506 (1081)
T KOG0618|consen 430 GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMD 506 (1081)
T ss_pred hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhhee
Confidence 99999999998887 566 788888999999999988743 3443333 7889999998874333334455566666666
Q ss_pred CCCC
Q 003931 591 LSHN 594 (785)
Q Consensus 591 ls~N 594 (785)
+.-|
T Consensus 507 i~~~ 510 (1081)
T KOG0618|consen 507 ITLN 510 (1081)
T ss_pred cccC
Confidence 5554
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.2e-33 Score=286.69 Aligned_cols=387 Identities=28% Similarity=0.422 Sum_probs=282.5
Q ss_pred cCCCCCCEEEcccCcCc-ccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCC
Q 003931 171 GQLKNLQHLDLRMNALN-YTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTEL 249 (785)
Q Consensus 171 ~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L 249 (785)
+-++-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|..++.+.+|++|.+++|++. .+... ++.++.|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGE-Ls~Lp~L 80 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGE-LSDLPRL 80 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhh-hccchhh
Confidence 34556677888888887 567777778888888888877776 66778888888888888888776 33333 5666777
Q ss_pred CEEEeecCcCcc-cCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEccc
Q 003931 250 ESLQIQNNSFMG-NIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFS 328 (785)
Q Consensus 250 ~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 328 (785)
+.+.+.+|++.. -+|.++..+..|+.|+|++|++. ..|..+....++-.|+||+|++..+...-|.+++.|-.|||++
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcccc
Confidence 777777776642 35666666777777777777776 5666666666777777777777633333455666666677777
Q ss_pred ccccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCccccccCCcccccCCCCccEEEcccccce-ec
Q 003931 329 NNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLINVSFSNNSFS-GE 407 (785)
Q Consensus 329 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~-~~ 407 (785)
|++. .+|+.+..+..|+.|++++|.+.-.- +.. +..+. +|+.|.+++.+-+ ..
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQ---LrQ---------------------LPsmt-sL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQ---LRQ---------------------LPSMT-SLSVLHMSNTQRTLDN 213 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhhHHH---Hhc---------------------Cccch-hhhhhhcccccchhhc
Confidence 6665 55555666666666666666553211 111 11111 4555566554322 35
Q ss_pred CCccccCCCCCcEEEccCCCCcccCCccccCCCCCcEEEcccCccccccCcccCCCCCCcEEEccCCeeeeecccchhcc
Q 003931 408 LPHELCSGFALEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQFTGNITKAFGVHPRLDFIRLSGNQFVGEISPDWGEC 487 (785)
Q Consensus 408 ~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 487 (785)
+|.++..+.+|..+|++.|++. ..|+++.++++|+.|++++|+|+.. ....+...+|+.|++|.|+++ ..|..+.++
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 7778888889999999999987 7889999999999999999999843 334455678999999999998 778899999
Q ss_pred cccceeccccceee-eccCcchhccccCCeeecccCccccCCCcccccCCCCCeecccCCcccCcCCcccccCCCCCeEe
Q 003931 488 RNLSNLQLDRNRIS-GGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNNHLTGEIPKSISNLTELAYLD 566 (785)
Q Consensus 488 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ 566 (785)
++|+.|++.+|++. ..+|..++.+..|+++..++|.+. ..|+.+..|..|+.|.|++|++. .+|+++.-++.|+.||
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLD 368 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLD 368 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceee
Confidence 99999999999986 347888999999999999999987 88999999999999999999987 7899999999999999
Q ss_pred cCCCcCccCCCccccccCCCcEEeCC
Q 003931 567 LSNNKLTGDVPQELGRFDKLLSLNLS 592 (785)
Q Consensus 567 Ls~n~l~~~~p~~l~~l~~L~~L~ls 592 (785)
+..|.-.-..|.--..-++++..++.
T Consensus 369 lreNpnLVMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 369 LRENPNLVMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred ccCCcCccCCCCcchhhhcceeeecc
Confidence 99987554444433334566665543
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.1e-33 Score=286.85 Aligned_cols=342 Identities=29% Similarity=0.412 Sum_probs=236.3
Q ss_pred CCCCcEEEccCCCCCCCccccccCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCc-ccCCccCCCCCCccEE
Q 003931 4 LSELQYLSVYDNNLNGAIPFQLSSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELT-LEFPSFILTCRNLTYL 82 (785)
Q Consensus 4 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L 82 (785)
++.++.|.|...++. .+|..++.+.+|++|.+++|++..+. +.++.++.|+.+.+.+|++. .-+|..+..+..|+.|
T Consensus 31 Mt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~l 108 (1255)
T KOG0444|consen 31 MTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTIL 108 (1255)
T ss_pred hhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCchhcccccceee
Confidence 344444444444443 33444566666666666666655543 44666677777777766654 2345556667777777
Q ss_pred ECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcc
Q 003931 83 DLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSF 162 (785)
Q Consensus 83 ~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~ 162 (785)
|||+|++. ..|..+ ..-+++-+|+||+|+|..+....|.++..|-+||||+|++. .+|..+..+..|++|+|++|.+
T Consensus 109 DLShNqL~-EvP~~L-E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL 185 (1255)
T KOG0444|consen 109 DLSHNQLR-EVPTNL-EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPL 185 (1255)
T ss_pred ecchhhhh-hcchhh-hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChh
Confidence 77777776 567665 66677777777777777666666777777777777777776 4555666777777777777766
Q ss_pred cccCCccccCCCCCCEEEcccCcCc-ccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCcc
Q 003931 163 TGQIPSSLGQLKNLQHLDLRMNALN-YTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISAN 241 (785)
Q Consensus 163 ~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 241 (785)
....-..+..+++|++|.+++.+-+ ..+|..+..+.+|+.++++.|.+. ..|..+.++++|+.|+|++|.++ ++...
T Consensus 186 ~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~ 263 (1255)
T KOG0444|consen 186 NHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMT 263 (1255)
T ss_pred hHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeecc
Confidence 5433334445566667777765533 356777777778888888888777 66777777888888888888877 44443
Q ss_pred ccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCcccc-ccCChhccCCCCCCEEECcCCcccccCCccCcCCCC
Q 003931 242 LIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFS-GPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTN 320 (785)
Q Consensus 242 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 320 (785)
.+.+.+|++|+++.|+++ ..|.+++.+++|+.|++.+|+++ .-+|..++.+..|+.+..++|.+. ..|+.++.|+.
T Consensus 264 -~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~k 340 (1255)
T KOG0444|consen 264 -EGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVK 340 (1255)
T ss_pred -HHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHH
Confidence 566677888888888877 57777888888888888887764 246777788888888888877776 67778888888
Q ss_pred CCEEEcccccccCCCCCCCCCCCCCCEEEccCCcCc
Q 003931 321 LLSLQLFSNNLSGTIPPEIGSMASLVAFDVNTNQLH 356 (785)
Q Consensus 321 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 356 (785)
|+.|.|+.|++. .+|+.+.-++.|+.||+..|.--
T Consensus 341 L~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 341 LQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred HHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 888888888776 67777777888888888777643
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=3.8e-28 Score=236.45 Aligned_cols=410 Identities=21% Similarity=0.202 Sum_probs=276.4
Q ss_pred CCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCC-CCCcccCChhhhcCCCCCcEEE
Q 003931 30 KVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSL-NKLSGLIPERLFTNLGKLEYLN 108 (785)
Q Consensus 30 ~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~~f~~l~~L~~L~ 108 (785)
....++|..|.|+.+++++|+.+++||.|||++|.|+.+.|.+|.++++|..|-+.+ |+|+ .+|...|.++..|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHh
Confidence 456788888999999999999999999999999999988899999988887777766 8888 78989999999999999
Q ss_pred CCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcc
Q 003931 109 LTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNY 188 (785)
Q Consensus 109 Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 188 (785)
+.-|++......+|..+++|..|.+.+|.+..+.-..|..+.+++.+.+..|.+.. ..+++.+... +.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla~~-~a------ 214 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLADD-LA------ 214 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhhhH-Hh------
Confidence 99888888888889999999999999998885555588888899999888886541 2223222221 11
Q ss_pred cCCccccCCcccCeeeccccccccCCchhccCC-CCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccC
Q 003931 189 TIPPELGLCTNLSYLALAVNQLSGGLPLSLSNL-SKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEI 267 (785)
Q Consensus 189 ~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l-~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 267 (785)
..|..++.........+.+.++....+..|... +.+..--.+.+...+..|...|..+++|++|+|++|+++.+-+.+|
T Consensus 215 ~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 215 MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 122234444444455555666655544444322 2222222233444457777778889999999999999998888889
Q ss_pred cCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCCCC-CC--------
Q 003931 268 GLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIP-PE-------- 338 (785)
Q Consensus 268 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~-------- 338 (785)
.....+++|+|..|++...-...|.++..|+.|+|.+|+++...|.+|..+..|.+|++-.|.+-..-- .+
T Consensus 295 e~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred cchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhC
Confidence 999999999999998877666778889999999999999998888889999999999988886642100 00
Q ss_pred -------CCCCCCCCEEEccCCcCc---cccCccccccCCCcEEEecCccccccCCcccccCCCCccEEEcccccceecC
Q 003931 339 -------IGSMASLVAFDVNTNQLH---GELPENISRLVKLNKFSVFTNNFSGSIPGDFGKFSPSLINVSFSNNSFSGEL 408 (785)
Q Consensus 339 -------~~~l~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 408 (785)
-+.-..++.++++...+. ...|+..+ +.-++.-|.. . +.+.++.=..|+....+
T Consensus 375 ~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~------------~~~s~~cP~~---c-~c~~tVvRcSnk~lk~l 438 (498)
T KOG4237|consen 375 SVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELG------------CLTSSPCPPP---C-TCLDTVVRCSNKLLKLL 438 (498)
T ss_pred CCCCCCCCCCCchhccccchhccccccccCCccccC------------CCCCCCCCCC---c-chhhhhHhhcccchhhc
Confidence 011112233333332221 11111100 0000001110 0 12222221222222244
Q ss_pred CccccCCCCCcEEEccCCCCcccCCccccCCCCCcEEEcccCccccccCcccCCCCCCcEEEccCC
Q 003931 409 PHELCSGFALEELTVNGNNFTGSLPACLRNCSNLNRVRFDGNQFTGNITKAFGVHPRLDFIRLSGN 474 (785)
Q Consensus 409 ~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~Ls~n 474 (785)
|..+. ...+++++.+|.++.+ |.. .+.+| .+++++|++.......|.++++|.+|.|++|
T Consensus 439 p~~iP--~d~telyl~gn~~~~v-p~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 439 PRGIP--VDVTELYLDGNAITSV-PDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred CCCCC--chhHHHhcccchhccc-CHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 44332 3466788888888744 443 45667 8899999998888888999999999988875
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=3.9e-23 Score=249.29 Aligned_cols=317 Identities=22% Similarity=0.267 Sum_probs=222.5
Q ss_pred CCccccCCCCCCcEEEccCCC------CcccCCccCCCCC-CccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcc
Q 003931 44 PDWSKFSSMPSLTHLGLYLNE------LTLEFPSFILTCR-NLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQG 116 (785)
Q Consensus 44 ~~~~~f~~l~~L~~L~L~~n~------i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~ 116 (785)
+...+|.++++|+.|.+..+. +....|..|..++ +|+.|++.++.+. .+|..+ ...+|++|++++|.+.
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~- 624 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLE- 624 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCcccc-
Confidence 345678888888888886553 2234556666654 5888888888887 677654 5688888999888887
Q ss_pred cCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccC
Q 003931 117 KLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGL 196 (785)
Q Consensus 117 ~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 196 (785)
..+..+..+++|+.|+|+++.....+| .++.+++|++|++++|.....+|..++++++|+.|++++|.....+|..+ +
T Consensus 625 ~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 625 KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-C
Confidence 466677888889999998876554566 47788889999998887666788888888889999988876555666655 6
Q ss_pred CcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcc-------cCCccCcC
Q 003931 197 CTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMG-------NIPPEIGL 269 (785)
Q Consensus 197 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-------~~~~~~~~ 269 (785)
+++|+.|++++|.....+|.. ..+|+.|++++|.+. .+|.. + .+++|++|.+.++.... ..+..+..
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~-~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~ 776 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSN-L-RLENLDELILCEMKSEKLWERVQPLTPLMTML 776 (1153)
T ss_pred CCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-ccccc-c-cccccccccccccchhhccccccccchhhhhc
Confidence 788888888888655455532 357888888888876 66664 2 56778888777643211 11112233
Q ss_pred CCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCCCCCCCCCCCCCCEEE
Q 003931 270 LTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFD 349 (785)
Q Consensus 270 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 349 (785)
+++|+.|++++|...+.+|.+++++++|+.|++++|...+.+|... .+++|+.|++++|.....+|.. .++|+.|+
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~ 852 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLN 852 (1153)
T ss_pred cccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeE
Confidence 4677888888877666777778888888888888775544666554 6777888888777654444432 35677777
Q ss_pred ccCCcCccccCccccccCCCcEEEecCc
Q 003931 350 VNTNQLHGELPENISRLVKLNKFSVFTN 377 (785)
Q Consensus 350 l~~n~l~~~~~~~~~~l~~L~~l~l~~n 377 (785)
+++|.+. .+|..+..+++|+.|++.+|
T Consensus 853 Ls~n~i~-~iP~si~~l~~L~~L~L~~C 879 (1153)
T PLN03210 853 LSRTGIE-EVPWWIEKFSNLSFLDMNGC 879 (1153)
T ss_pred CCCCCCc-cChHHHhcCCCCCEEECCCC
Confidence 7777776 45666666666666666554
No 13
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=3.6e-27 Score=229.68 Aligned_cols=277 Identities=22% Similarity=0.224 Sum_probs=190.5
Q ss_pred CccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCC-CcccccCCcCCCCCCCCCEEE
Q 003931 78 NLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLAT-NKFSGPIPGDIGSMSNLQLVE 156 (785)
Q Consensus 78 ~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~-n~~~~~~~~~l~~l~~L~~L~ 156 (785)
.-..++|..|+|+ .||+.+|..+++|+.|||++|+|+.+.|.+|.++.+|..|-+.+ |+|+....+.|+++..|+.|.
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4566777778777 67777778888888888888888877777888887777766655 777766666777888888888
Q ss_pred cccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccc------------cCCchhccCCCCC
Q 003931 157 LFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLS------------GGLPLSLSNLSKL 224 (785)
Q Consensus 157 L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~------------~~~~~~l~~l~~L 224 (785)
+.-|++.....++|..+++|..|.+.+|.+....-..|..+..++.+.+..|.+. ...|..++.....
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 8777777777777778888888888887776444446777777777777777621 1223344444445
Q ss_pred CEEEccCCCCccccCccccCC-CCCCCEEEeecCcCcccCC-ccCcCCCCCcEEECcCccccccCChhccCCCCCCEEEC
Q 003931 225 NDLGLSDNFLSGEISANLIGN-WTELESLQIQNNSFMGNIP-PEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDL 302 (785)
Q Consensus 225 ~~L~L~~n~l~~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 302 (785)
.-..+.+.++. .+++.-|.. +..+.+=-.+.+...+.-| ..|..+++|++|+|++|+++++-+.+|.....+++|.|
T Consensus 227 ~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 227 SPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred chHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 55555555554 333321221 1122111122232333333 24777888888888888888888888888888888888
Q ss_pred cCCcccccCCccCcCCCCCCEEEcccccccCCCCCCCCCCCCCCEEEccCCcCc
Q 003931 303 SGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFDVNTNQLH 356 (785)
Q Consensus 303 s~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 356 (785)
..|++...-...|.++..|+.|+|++|+|+...|.+|..+..|.++.+-.|.+.
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 888887666667788888888888888888777777888888888887777654
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=7.2e-23 Score=247.01 Aligned_cols=343 Identities=23% Similarity=0.258 Sum_probs=267.8
Q ss_pred CccccccCCCCCCEEeCCCCCCC------CCCccccCCCC-CCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCccc
Q 003931 20 AIPFQLSSLRKVRYLDLGGNFLE------TPDWSKFSSMP-SLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGL 92 (785)
Q Consensus 20 ~~~~~~~~l~~L~~L~L~~n~i~------~~~~~~f~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~ 92 (785)
+.+.+|.++++|+.|.+..+... ...+..|..++ +|+.|.+.++.+. ..|..| ...+|+.|++++|.+. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 34567899999999999765422 12344566664 6999999999886 445555 4689999999999988 6
Q ss_pred CChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccC
Q 003931 93 IPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQ 172 (785)
Q Consensus 93 ~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~ 172 (785)
++..+ ..+++|++|+|+++.....+| .+..+++|+.|++++|.....+|..+..+++|+.|++++|...+.+|..+ +
T Consensus 626 L~~~~-~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 626 LWDGV-HSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred ccccc-ccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-C
Confidence 77665 789999999999876544555 48889999999999988777889999999999999999987666777765 7
Q ss_pred CCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCc---c---ccCccccCCC
Q 003931 173 LKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLS---G---EISANLIGNW 246 (785)
Q Consensus 173 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~---~---~~~~~~~~~l 246 (785)
+++|++|++++|.....+|.. .++|+.|++++|.+. .+|..+ .+++|+.|.+.++... + .++.......
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~ 777 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLS 777 (1153)
T ss_pred CCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhcc
Confidence 899999999999766566543 467899999999987 455544 5788888888875422 0 1111123345
Q ss_pred CCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEc
Q 003931 247 TELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQL 326 (785)
Q Consensus 247 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 326 (785)
++|+.|++++|...+.+|.+++++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. .++|+.|++
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 789999999998888899999999999999999986655777765 7899999999998765566643 368999999
Q ss_pred ccccccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCcc
Q 003931 327 FSNNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNN 378 (785)
Q Consensus 327 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 378 (785)
++|.++ .+|..+..+++|+.|++++|.--..+|..+..+++|+.+++++|.
T Consensus 854 s~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 999998 678889999999999999865444577777777777777776663
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=3.3e-20 Score=206.99 Aligned_cols=262 Identities=25% Similarity=0.275 Sum_probs=132.7
Q ss_pred CcEEEccCCCCCCCccccccCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCC
Q 003931 7 LQYLSVYDNNLNGAIPFQLSSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSL 86 (785)
Q Consensus 7 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 86 (785)
-..|+++++.++. +|..+. ++|+.|++++|+++.++. ..++|++|++++|.++.+ |.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCcc-cCc---ccccceeeccC
Confidence 4456777777663 343343 366777777777666542 245666666666666643 221 24566666666
Q ss_pred CCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccC
Q 003931 87 NKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQI 166 (785)
Q Consensus 87 n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~ 166 (785)
|.++ .+|.. ..+|+.|++++|+++.. |. ..++|+.|++++|++++ +|.. ..+|+.|++++|.+++ +
T Consensus 272 N~L~-~Lp~l----p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 272 NPLT-HLPAL----PSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred Cchh-hhhhc----hhhcCEEECcCCccccc-cc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-c
Confidence 6665 34431 24455666666666532 22 12456666666666553 2321 1234555555555543 2
Q ss_pred CccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCC
Q 003931 167 PSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNW 246 (785)
Q Consensus 167 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l 246 (785)
|.. ..+|++|++++|+++. +|.. .++|+.| ++++|.+. .+|.. .
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L------------------------~Ls~N~L~-~LP~l----~ 381 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKL------------------------WAYNNRLT-SLPAL----P 381 (788)
T ss_pred ccc---ccccceEecCCCccCC-CCCC---Cccccee------------------------hhhccccc-cCccc----c
Confidence 321 1245555555555542 2221 1234444 44444444 23321 1
Q ss_pred CCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEc
Q 003931 247 TELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQL 326 (785)
Q Consensus 247 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 326 (785)
.+|+.|++++|.+.+ +|.. .++|+.|++++|.+++ +|.. ..+|+.|++++|+++ .+|..+..+++|+.|++
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdL 452 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 452 (788)
T ss_pred cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEEC
Confidence 345555555555542 3321 2345556666665553 3432 234555666666665 45555666666666666
Q ss_pred ccccccCCCCCC
Q 003931 327 FSNNLSGTIPPE 338 (785)
Q Consensus 327 ~~n~l~~~~p~~ 338 (785)
++|++++..+..
T Consensus 453 s~N~Ls~~~~~~ 464 (788)
T PRK15387 453 EGNPLSERTLQA 464 (788)
T ss_pred CCCCCCchHHHH
Confidence 666666554443
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.83 E-value=7.7e-20 Score=204.09 Aligned_cols=123 Identities=26% Similarity=0.424 Sum_probs=55.5
Q ss_pred CCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcc
Q 003931 248 ELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLF 327 (785)
Q Consensus 248 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 327 (785)
+|++|++++|++.+ +|.. .++|+.|++++|.+++ +|.. ..+|+.|++++|++++ +|.. .++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVS 410 (788)
T ss_pred ccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEcc
Confidence 34455555554442 2221 1334444555555442 3321 1344555555555542 2321 1345555555
Q ss_pred cccccCCCCCCCCCCCCCCEEEccCCcCccccCccccccCCCcEEEecCccccccCCccc
Q 003931 328 SNNLSGTIPPEIGSMASLVAFDVNTNQLHGELPENISRLVKLNKFSVFTNNFSGSIPGDF 387 (785)
Q Consensus 328 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~ 387 (785)
+|++++ +|.. ..+|+.|++++|+++ .+|..+..+++|+.+++++|++++.++..+
T Consensus 411 ~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 411 GNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 555542 3322 223444555555554 345555555555555555555555444433
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=1.2e-18 Score=196.10 Aligned_cols=204 Identities=28% Similarity=0.444 Sum_probs=89.9
Q ss_pred CCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeecc
Q 003931 127 NLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALA 206 (785)
Q Consensus 127 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 206 (785)
+|+.|++++|+++ .+|..+. .+|+.|++++|.+. .+|..+. .+|+.|++++|.++ .+|..+. ++|+.|+++
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred CCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 4444444444444 2232221 23444444444444 2333332 24444444444444 2333222 244455555
Q ss_pred ccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCcccccc
Q 003931 207 VNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGP 286 (785)
Q Consensus 207 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 286 (785)
+|++++ +|..+. ++|+.|++++|.++ .+|... .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .
T Consensus 292 ~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l---~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~ 360 (754)
T PRK15370 292 DNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETL---PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-V 360 (754)
T ss_pred CCcccc-Ccccch--hhHHHHHhcCCccc-cCCccc---cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-c
Confidence 544442 222221 23445555555554 233321 1345555555555543 333332 45555555555554 2
Q ss_pred CChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCCCCCCC----CCCCCCCEEEccCCcCc
Q 003931 287 IPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIPPEI----GSMASLVAFDVNTNQLH 356 (785)
Q Consensus 287 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~L~~L~l~~n~l~ 356 (785)
+|..+. ++|+.|++++|+++ .+|..+. ..|+.|++++|+++ .+|..+ ..++.+..+++.+|.+.
T Consensus 361 LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 361 LPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 443332 45555555555555 2333332 24555555555555 333322 23355556666666554
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.76 E-value=1.7e-18 Score=194.88 Aligned_cols=225 Identities=27% Similarity=0.403 Sum_probs=119.2
Q ss_pred CCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEc
Q 003931 54 SLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRL 133 (785)
Q Consensus 54 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 133 (785)
+|+.|++++|.++.. |..+. .+|++|++++|.++ .+|..++ .+|+.|+|++|.+. .+|..+. .+|+.|++
T Consensus 200 ~L~~L~Ls~N~LtsL-P~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 200 QITTLILDNNELKSL-PENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred CCcEEEecCCCCCcC-Chhhc--cCCCEEECCCCccc-cCChhhh---ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 344444444444422 22111 24455555555544 3443321 24455555555544 2333322 24555555
Q ss_pred CCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccC
Q 003931 134 ATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGG 213 (785)
Q Consensus 134 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~ 213 (785)
++|+++ .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|.++. +|..+. ++|+.|++++|.+++
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~- 339 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS- 339 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-
Confidence 555555 2343332 355555555555553 333222 245666666666653 333222 456666666666653
Q ss_pred CchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChh---
Q 003931 214 LPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSE--- 290 (785)
Q Consensus 214 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~--- 290 (785)
+|..+. ++|+.|++++|.++ .+|..+ .++|++|++++|.+. .+|..+. ..|+.|++++|+++ .+|..
T Consensus 340 LP~~l~--~sL~~L~Ls~N~L~-~LP~~l---p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~ 409 (754)
T PRK15370 340 LPASLP--PELQVLDVSKNQIT-VLPETL---PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPH 409 (754)
T ss_pred CChhhc--CcccEEECCCCCCC-cCChhh---cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHH
Confidence 344332 56777777777776 455542 246777777777776 3454443 35777888888776 34443
Q ss_pred -ccCCCCCCEEECcCCccc
Q 003931 291 -IEKLTSLENLDLSGNQLS 308 (785)
Q Consensus 291 -~~~l~~L~~L~Ls~n~l~ 308 (785)
++.++.+..|++.+|+++
T Consensus 410 ~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 410 FRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HhhcCCCccEEEeeCCCcc
Confidence 344577888888888876
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=4.7e-19 Score=186.42 Aligned_cols=104 Identities=29% Similarity=0.294 Sum_probs=47.7
Q ss_pred EeCCCCCCCCCCc-cccCCCCCCcEEEccCCCCccc----CCccCCCCCCccEEECCCCCCcccCCh------hhhcCCC
Q 003931 34 LDLGGNFLETPDW-SKFSSMPSLTHLGLYLNELTLE----FPSFILTCRNLTYLDLSLNKLSGLIPE------RLFTNLG 102 (785)
Q Consensus 34 L~L~~n~i~~~~~-~~f~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~Ls~n~i~~~~~~------~~f~~l~ 102 (785)
|+|+.+.+..-.+ ..|..+.+|++|+++++.++.. ++..+...+++++++++++.+.+ .+. ..|..++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGLQSLLQGLTKGC 81 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHHHHHHHHHHhcC
Confidence 5555555543222 2344555666666666665322 23334445556666666555431 111 1234445
Q ss_pred CCcEEECCCCCCcccCCccccCCCC---CcEEEcCCCcc
Q 003931 103 KLEYLNLTENQFQGKLSPNVSKLSN---LIDLRLATNKF 138 (785)
Q Consensus 103 ~L~~L~Ls~n~i~~~~~~~~~~l~~---L~~L~L~~n~~ 138 (785)
+|++|++++|.+.+..+..+..+.+ |++|++++|++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~ 120 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGL 120 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCcc
Confidence 5555555555544333333322222 44444444443
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=4.5e-19 Score=186.57 Aligned_cols=57 Identities=21% Similarity=0.108 Sum_probs=27.1
Q ss_pred EEccCCCCc-ccCCccCCCCCCccEEECCCCCCccc----CChhhhcCCCCCcEEECCCCCCc
Q 003931 58 LGLYLNELT-LEFPSFILTCRNLTYLDLSLNKLSGL----IPERLFTNLGKLEYLNLTENQFQ 115 (785)
Q Consensus 58 L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~----~~~~~f~~l~~L~~L~Ls~n~i~ 115 (785)
|+|..+.++ ......+..+.+|+.++++++.++.. ++.. +...+.+++++++++.+.
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~-l~~~~~l~~l~l~~~~~~ 64 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASA-LRPQPSLKELCLSLNETG 64 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHH-HhhCCCceEEeccccccC
Confidence 445555544 22233444455566666666655321 2222 234455566666555544
No 21
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.7e-17 Score=173.28 Aligned_cols=98 Identities=34% Similarity=0.465 Sum_probs=82.4
Q ss_pred hhhhhhhcccccccceeeeehhhhhhhhCCCCCc---------hhhhccC---cccccccccCCCCCCCchhHHHHHHHH
Q 003931 669 LTELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE---------LITSLSG---ELFLKDVLDQRLPPPTGQLAEAVVLTI 736 (785)
Q Consensus 669 l~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~---------~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~ 736 (785)
-+||..++++|+|+||||||||+||++|||+|.| ++.|++. .....+++||++........+++.+++
T Consensus 246 ~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~ 325 (361)
T KOG1187|consen 246 APEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLA 325 (361)
T ss_pred ChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHH
Confidence 3699999999999999999999999999999876 6778754 457899999999732112226788899
Q ss_pred HHHhhcCCCCCCCCCChHHHHHHHHhcccc
Q 003931 737 NVALACTSTTPDTRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 737 ~ial~C~~~~p~~Rp~m~~vv~~l~~~~~~ 766 (785)
++|+.|++.+|++||+|.|||++|+.+...
T Consensus 326 ~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 326 ELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 999999999999999999999999776543
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=1.6e-18 Score=149.92 Aligned_cols=165 Identities=36% Similarity=0.620 Sum_probs=94.7
Q ss_pred CCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCee
Q 003931 124 KLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYL 203 (785)
Q Consensus 124 ~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 203 (785)
++.++..|.|++|+++ .+|..++.+.+|++|++++|++. ..|..++.+++|++|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3445555666666666 34445666666666666666665 45555666666666666666554 455555555555555
Q ss_pred eccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccc
Q 003931 204 ALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNF 283 (785)
Q Consensus 204 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 283 (785)
++.+|++... .+|.+ |..++.|+.|.+++|.+. .+|.+++++++|+.|.+..|.+
T Consensus 108 dltynnl~e~-----------------------~lpgn-ff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 108 DLTYNNLNEN-----------------------SLPGN-FFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred hccccccccc-----------------------cCCcc-hhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCch
Confidence 5555544321 23333 333455555555666555 4555666666666666666665
Q ss_pred cccCChhccCCCCCCEEECcCCcccccCCccCcCC
Q 003931 284 SGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNL 318 (785)
Q Consensus 284 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l 318 (785)
- .+|..++.++.|++|.+.+|+++ .+|+.++++
T Consensus 163 l-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 163 L-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred h-hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 5 45666666666666666666666 444444443
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.63 E-value=3.9e-18 Score=147.63 Aligned_cols=165 Identities=33% Similarity=0.544 Sum_probs=124.4
Q ss_pred cCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCC
Q 003931 171 GQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELE 250 (785)
Q Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 250 (785)
..+.+.+.|.+++|+++ .+|+.+..+.+|+.|++.+|+++ ..|..++++++|+.|+++-|++. ..|.. |+.++.|+
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprg-fgs~p~le 105 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRG-FGSFPALE 105 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccc-cCCCchhh
Confidence 34556666777777776 55666777777777777777776 56677777888888888888776 66666 78888888
Q ss_pred EEEeecCcCcc-cCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccc
Q 003931 251 SLQIQNNSFMG-NIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSN 329 (785)
Q Consensus 251 ~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n 329 (785)
.||+.+|.+.. ..|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+- ..|..++.++.|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 88888877754 46777777888888888888886 67777888888888888888877 67778888888888888888
Q ss_pred cccCCCCCCCCCC
Q 003931 330 NLSGTIPPEIGSM 342 (785)
Q Consensus 330 ~l~~~~p~~~~~l 342 (785)
+++ .+|++++++
T Consensus 184 rl~-vlppel~~l 195 (264)
T KOG0617|consen 184 RLT-VLPPELANL 195 (264)
T ss_pred eee-ecChhhhhh
Confidence 887 566655543
No 24
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.18 E-value=8.7e-13 Score=135.90 Aligned_cols=172 Identities=28% Similarity=0.449 Sum_probs=84.9
Q ss_pred CCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeecc
Q 003931 127 NLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALA 206 (785)
Q Consensus 127 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 206 (785)
--...|++.|++. .+|..+..+..|+.+.|++|.+. .+|..++++..|+.+|++.|+++ ..|..+..|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3344566666665 45555555566666666666655 45555666666666666666655 4444444443 5555555
Q ss_pred ccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCcccccc
Q 003931 207 VNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGP 286 (785)
Q Consensus 207 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 286 (785)
+|+++ .+|..++....|..|+.+.|.+. .+|.. ++.+.+|+.|.+..|++. .+|..+.. -.|..||++.|+++ .
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsq-l~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQ-LGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-Y 225 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHH-hhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-e
Confidence 55554 34444444455555555555544 33333 444444444444444444 23333332 22444444444443 3
Q ss_pred CChhccCCCCCCEEECcCCccc
Q 003931 287 IPSEIEKLTSLENLDLSGNQLS 308 (785)
Q Consensus 287 ~p~~~~~l~~L~~L~Ls~n~l~ 308 (785)
+|..|.++..|++|-|.+|.+.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC
Confidence 4444444444444444444443
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.13 E-value=5.2e-12 Score=130.27 Aligned_cols=194 Identities=34% Similarity=0.506 Sum_probs=154.0
Q ss_pred CCCCcEEEccCCeeeeecccchhcccccceeccccceeeeccCcchhccccCCeeecccCccccCCCcccccCCCCCeec
Q 003931 463 HPRLDFIRLSGNQFVGEISPDWGECRNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVKLFNLN 542 (785)
Q Consensus 463 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 542 (785)
+.--...|++.|++. .+|..+..+..|+.+.|.+|.+. .+|..+.++..|..+||+.|++. ..|..+..+ -|+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-pLkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-PLKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-cceeEE
Confidence 344567889999987 67788888899999999999987 67888999999999999999998 566666665 489999
Q ss_pred ccCCcccCcCCcccccCCCCCeEecCCCcCccCCCccccccCCCcEEeCCCCcCcccCCcccchhhhhhheeecccccCC
Q 003931 543 LSNNHLTGEIPKSISNLTELAYLDLSNNKLTGDVPQELGRFDKLLSLNLSHNDLSGEIPSNLGNLFVLQYMLDLSSNSLS 622 (785)
Q Consensus 543 ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~~~l~ls~n~l~ 622 (785)
+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++.+.+|+.|+++.|++. .+|+.+..|+-.. +|+|+|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~--lDfScNkis 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIR--LDFSCNKIS 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceee--eecccCcee
Confidence 9999998 78888888899999999999988 57778899999999999999987 5677766655443 899999988
Q ss_pred CCCCcccccCCCCceEeccCCceeeecCCccc---ccccceeeecCCC
Q 003931 623 GTIPQELGKLTSLEILNLSRNQLSGRIPASLS---SMISLRSVDFSDN 667 (785)
Q Consensus 623 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~l~~l~l~~n 667 (785)
.+|..|..++.|++|-|.+|.++. .|..+. ...-.++|+....
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQS-PPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCC-ChHHHHhccceeeeeeecchhc
Confidence 778889999999999999998873 333332 2223455555443
No 26
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.12 E-value=9.4e-11 Score=126.86 Aligned_cols=199 Identities=36% Similarity=0.500 Sum_probs=132.8
Q ss_pred EEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCC-CCcEEECCCCCCcccCCccccCCCCCcEEEcCC
Q 003931 57 HLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLG-KLEYLNLTENQFQGKLSPNVSKLSNLIDLRLAT 135 (785)
Q Consensus 57 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 135 (785)
.+++..+.+... ...+..++.++.|++.+|.++ .++... .... +|++|++++|.+. ..+..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~-~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLI-GLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCcccc-ccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 466666655322 223344467777777777777 556544 4443 7777788777777 3445677777788888888
Q ss_pred CcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCc
Q 003931 136 NKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLP 215 (785)
Q Consensus 136 n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 215 (785)
|++. .+|...+..++|+.|++++|.+. .+|........|+++.+++|.+. ..+..+..++++..+.+.+|++.. .+
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-cc
Confidence 8777 34444446777788888888777 44554455556778888877533 445566777777777777777663 25
Q ss_pred hhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCcc
Q 003931 216 LSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPE 266 (785)
Q Consensus 216 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 266 (785)
..++.++.++.|++++|.++ .++. ++.+.+++.|++++|.+....|..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred chhccccccceecccccccc-cccc--ccccCccCEEeccCccccccchhh
Confidence 66677777888888888877 5554 677788888888888777655543
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.11 E-value=1.2e-10 Score=126.11 Aligned_cols=198 Identities=37% Similarity=0.547 Sum_probs=111.2
Q ss_pred EEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCC-CCCEEEcccCcccccCCccccCCCCCCEEEcccC
Q 003931 106 YLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMS-NLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMN 184 (785)
Q Consensus 106 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~-~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n 184 (785)
.++++.+.+. .....+..++.+..|++.+|.++ .++....... +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 3445444442 12223333455555666665555 3333444442 5666666666655 33344556666666666666
Q ss_pred cCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCC
Q 003931 185 ALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIP 264 (785)
Q Consensus 185 ~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 264 (785)
.+. .++...+..+.|+.|++++|++. .+|........|+++.+++|.+. ..+.. +.++.++..+.+.+|++.. .+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~-~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSS-LSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchh-hhhcccccccccCCceeee-cc
Confidence 665 33433335566666666666665 33444344455666666666433 22222 5666666666666666553 24
Q ss_pred ccCcCCCCCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCc
Q 003931 265 PEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPP 313 (785)
Q Consensus 265 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 313 (785)
..++.++.+++|++++|.++... . ++.+.+++.|++++|.+....|.
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~-~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSIS-S-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred chhccccccceeccccccccccc-c-ccccCccCEEeccCccccccchh
Confidence 55666777777777777776432 2 66777777777777777655443
No 28
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=4.8e-11 Score=109.60 Aligned_cols=130 Identities=28% Similarity=0.250 Sum_probs=52.1
Q ss_pred ccCCCCCCEEeCCCCCCCCCCccccC-CCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCC
Q 003931 25 LSSLRKVRYLDLGGNFLETPDWSKFS-SMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGK 103 (785)
Q Consensus 25 ~~~l~~L~~L~L~~n~i~~~~~~~f~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~ 103 (785)
+.+..+++.|+|++|.|+.++. +. .+.+|++|++++|.|+.+ +.+..+++|+.|++++|.|+ .+...+...+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp ---------------------S----TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccccccc--hhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 4566678899999999888763 44 578899999999998865 35777889999999999998 566554456889
Q ss_pred CcEEECCCCCCcccC-CccccCCCCCcEEEcCCCcccccCC---cCCCCCCCCCEEEccc
Q 003931 104 LEYLNLTENQFQGKL-SPNVSKLSNLIDLRLATNKFSGPIP---GDIGSMSNLQLVELFN 159 (785)
Q Consensus 104 L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~n~~~~~~~---~~l~~l~~L~~L~L~~ 159 (785)
|++|++++|+|.... -..+..+++|+.|++.+|.++...- ..+..+++|+.||-..
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~~ 149 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQD 149 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTEE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCEE
Confidence 999999999987532 2456788999999999998874321 1246788999988653
No 29
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=8.5e-11 Score=107.99 Aligned_cols=130 Identities=25% Similarity=0.288 Sum_probs=50.0
Q ss_pred ccCCCCCCcEEEccCCCCcccCCccCC-CCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCC
Q 003931 48 KFSSMPSLTHLGLYLNELTLEFPSFIL-TCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLS 126 (785)
Q Consensus 48 ~f~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 126 (785)
.+.+...++.|+|.+|.|+.+ +.++ .+.+|+.|++++|.|+ .++. +..++.|++|++++|.|+.........++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~-~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQIT-KLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS---S-CHHHHHH-T
T ss_pred ccccccccccccccccccccc--cchhhhhcCCCEEECCCCCCc-cccC--ccChhhhhhcccCCCCCCccccchHHhCC
Confidence 355666789999999998865 2344 5788999999999988 4553 47889999999999999854332224688
Q ss_pred CCcEEEcCCCcccccCC-cCCCCCCCCCEEEcccCcccccCC---ccccCCCCCCEEEcc
Q 003931 127 NLIDLRLATNKFSGPIP-GDIGSMSNLQLVELFNNSFTGQIP---SSLGQLKNLQHLDLR 182 (785)
Q Consensus 127 ~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~L~~n~~~~~~~---~~l~~l~~L~~L~l~ 182 (785)
+|+.|++++|++..... ..++.+++|++|++.+|.+....- ..+..+|+|+.||-.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 99999999998875321 346678899999999998874311 236678899988754
No 30
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.08 E-value=8.6e-11 Score=135.26 Aligned_cols=129 Identities=29% Similarity=0.325 Sum_probs=70.0
Q ss_pred CCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCC--CcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcE
Q 003931 29 RKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNE--LTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEY 106 (785)
Q Consensus 29 ~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~ 106 (785)
...|...+.+|.+..+... ..++.|++|-+..|. +..+....|..++.|++|||++|.--+.+|..+ +.+-+||+
T Consensus 523 ~~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I-~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSI-GELVHLRY 599 (889)
T ss_pred hheeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHH-hhhhhhhc
Confidence 4455555555555443311 223355565555554 444444455556666666666554333556555 55666666
Q ss_pred EECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCc
Q 003931 107 LNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNS 161 (785)
Q Consensus 107 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 161 (785)
|+++++.+. ..|..+.+++.|.+|++..+.....+|.....+++|++|.+....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 666666655 555566666666666666555444444444556666666665543
No 31
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=2.5e-11 Score=121.62 Aligned_cols=211 Identities=23% Similarity=0.225 Sum_probs=110.9
Q ss_pred cCCCCCCEEeCCCCCCCCCCc-cccCCCCCCcEEEccCCCCccc--CCccCCCCCCccEEECCCCCCcccCChhhhcCCC
Q 003931 26 SSLRKVRYLDLGGNFLETPDW-SKFSSMPSLTHLGLYLNELTLE--FPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLG 102 (785)
Q Consensus 26 ~~l~~L~~L~L~~n~i~~~~~-~~f~~l~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~ 102 (785)
+++.+|+.+.|.++.+..... .....|++++.|||++|-+..- .-.....+++|+.|+++.|++........-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 455556666666555443321 2334566666666666654422 1223345566666666666554222222223455
Q ss_pred CCcEEECCCCCCccc-CCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccC-CccccCCCCCCEEE
Q 003931 103 KLEYLNLTENQFQGK-LSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQI-PSSLGQLKNLQHLD 180 (785)
Q Consensus 103 ~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~-~~~l~~l~~L~~L~ 180 (785)
+|+.|.|+.|.++.. +......+++|+.|+|..|............++.|++|+|++|.+.... -...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 666666666666522 1122345566666666666422222223344566666666666655321 12355666666666
Q ss_pred cccCcCcccC-Ccc-----ccCCcccCeeeccccccccCC-chhccCCCCCCEEEccCCCCcc
Q 003931 181 LRMNALNYTI-PPE-----LGLCTNLSYLALAVNQLSGGL-PLSLSNLSKLNDLGLSDNFLSG 236 (785)
Q Consensus 181 l~~n~l~~~~-~~~-----~~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L~L~~n~l~~ 236 (785)
++.+.+...- |+. ...+++|++|++..|+|...- -..+..+++|+.|.+..|.+..
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 6666665322 111 245567777777777774321 2334455667777777776653
No 32
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.7e-11 Score=122.76 Aligned_cols=229 Identities=24% Similarity=0.210 Sum_probs=156.2
Q ss_pred EeCCCCCCCCCCcccc----CCCCCCcEEEccCCCCcccCC-ccCCCCCCccEEECCCCCCcccCC-hhhhcCCCCCcEE
Q 003931 34 LDLGGNFLETPDWSKF----SSMPSLTHLGLYLNELTLEFP-SFILTCRNLTYLDLSLNKLSGLIP-ERLFTNLGKLEYL 107 (785)
Q Consensus 34 L~L~~n~i~~~~~~~f----~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~-~~~f~~l~~L~~L 107 (785)
+.+++-.+..+..+.+ +++..|+.+.|.++.+..... .....|++++.||||+|-+....+ ..+...+++|+.|
T Consensus 98 ~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~L 177 (505)
T KOG3207|consen 98 LSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENL 177 (505)
T ss_pred hhhcCceeEEecHHHHHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhc
Confidence 3444444444443332 467889999998888763332 366778999999999997663222 2344679999999
Q ss_pred ECCCCCCcccCCc-cccCCCCCcEEEcCCCcccccCC-cCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCc
Q 003931 108 NLTENQFQGKLSP-NVSKLSNLIDLRLATNKFSGPIP-GDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNA 185 (785)
Q Consensus 108 ~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 185 (785)
+|+.|.+...... .-..+++|+.|.++.|.++...- .....+++|+.|+|..|...........-+..|+.|||++|.
T Consensus 178 Nls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~ 257 (505)
T KOG3207|consen 178 NLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNN 257 (505)
T ss_pred ccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCc
Confidence 9999987733222 22357889999999998874211 223578999999999996443333344557789999999998
Q ss_pred CcccC-CccccCCcccCeeeccccccccCC-chh-----ccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCc
Q 003931 186 LNYTI-PPELGLCTNLSYLALAVNQLSGGL-PLS-----LSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNS 258 (785)
Q Consensus 186 l~~~~-~~~~~~l~~L~~L~l~~n~i~~~~-~~~-----l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 258 (785)
+-... -...+.++.|+.|+++.+.+...- |+. ...+++|++|++..|++...-..+-+..+++|+.|.+..|.
T Consensus 258 li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 258 LIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNY 337 (505)
T ss_pred ccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccc
Confidence 75321 245678889999999999887642 322 35678999999999998633222235556778888888887
Q ss_pred Cccc
Q 003931 259 FMGN 262 (785)
Q Consensus 259 l~~~ 262 (785)
+...
T Consensus 338 ln~e 341 (505)
T KOG3207|consen 338 LNKE 341 (505)
T ss_pred cccc
Confidence 7643
No 33
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.03 E-value=4.7e-11 Score=113.45 Aligned_cols=133 Identities=25% Similarity=0.242 Sum_probs=84.1
Q ss_pred CCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCC
Q 003931 146 IGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLN 225 (785)
Q Consensus 146 l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~ 225 (785)
+...+.|+++||++|.++ .+.+++.-.|.++.|++|+|.+... ..++.+++|+.|++++|.++ .+..+-.++-+++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 334456666677776666 3445555666677777777766533 23566667777777777665 2333444566667
Q ss_pred EEEccCCCCccccCccccCCCCCCCEEEeecCcCcccC-CccCcCCCCCcEEECcCccccc
Q 003931 226 DLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNI-PPEIGLLTKLQYLFLYRNNFSG 285 (785)
Q Consensus 226 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~ 285 (785)
.|.|+.|.+. .+.. ++.+-+|..||+++|++.... -..++++|-|+.+.|.+|.+.+
T Consensus 356 tL~La~N~iE-~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 356 TLKLAQNKIE-TLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeehhhhhHh-hhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 7777777665 3332 566667777777777765321 2357788888888888888764
No 34
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.02 E-value=2.5e-11 Score=118.30 Aligned_cols=136 Identities=21% Similarity=0.244 Sum_probs=89.2
Q ss_pred CCCCCcEEEcCCCcccccC----CcCCCCCCCCCEEEcccCcccc----cCCccccCCCCCCEEEcccCcCcc----cCC
Q 003931 124 KLSNLIDLRLATNKFSGPI----PGDIGSMSNLQLVELFNNSFTG----QIPSSLGQLKNLQHLDLRMNALNY----TIP 191 (785)
Q Consensus 124 ~l~~L~~L~L~~n~~~~~~----~~~l~~l~~L~~L~L~~n~~~~----~~~~~l~~l~~L~~L~l~~n~l~~----~~~ 191 (785)
.-+.|+++..++|++.... ...|...+.|+.+.++.|.+.. ....++..+++|++||+..|.++. .+.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 3467777777777765321 2234556778888888776652 223456778888888888887753 233
Q ss_pred ccccCCcccCeeeccccccccCCchhc-----cCCCCCCEEEccCCCCccc---cCccccCCCCCCCEEEeecCcC
Q 003931 192 PELGLCTNLSYLALAVNQLSGGLPLSL-----SNLSKLNDLGLSDNFLSGE---ISANLIGNWTELESLQIQNNSF 259 (785)
Q Consensus 192 ~~~~~l~~L~~L~l~~n~i~~~~~~~l-----~~l~~L~~L~L~~n~l~~~---~~~~~~~~l~~L~~L~L~~n~l 259 (785)
..+...++|+.+++++|.+......++ ...++|++|.+.+|.++.. .-.......+.|+.|+|++|.+
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 445566778888888887765433333 2467888888888887632 1122245578888999999888
No 35
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.01 E-value=6.1e-11 Score=112.70 Aligned_cols=223 Identities=21% Similarity=0.179 Sum_probs=117.8
Q ss_pred CCCCcEEEccCCC--------CCCCccccccCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCC
Q 003931 4 LSELQYLSVYDNN--------LNGAIPFQLSSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILT 75 (785)
Q Consensus 4 l~~L~~L~L~~n~--------i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~ 75 (785)
+..|..|.+++-. +...+|..+..+++|+.+.+|.+.-..|.. .-..-|.|+++...+..++... .+-.
T Consensus 181 ~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i~~-~~~~kptl~t~~v~~s~~~~~~--~l~p 257 (490)
T KOG1259|consen 181 CTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENIVD-IELLKPTLQTICVHNTTIQDVP--SLLP 257 (490)
T ss_pred hhheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhheec-eeecCchhheeeeecccccccc--cccc
Confidence 3455566655432 223345556677777777777775433321 1122356777766655443211 1111
Q ss_pred CCCccEEECCCCC-CcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCE
Q 003931 76 CRNLTYLDLSLNK-LSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQL 154 (785)
Q Consensus 76 l~~L~~L~Ls~n~-i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 154 (785)
...+.-..-+.-. .+|..-..+ .....|+++|||+|.|+ .+.....-.+.++.|++|+|.+... +.+..+++|+.
T Consensus 258 e~~~~D~~~~E~~t~~G~~~~~~-dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~ 333 (490)
T KOG1259|consen 258 ETILADPSGSEPSTSNGSALVSA-DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQL 333 (490)
T ss_pred hhhhcCccCCCCCccCCceEEec-chHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceE
Confidence 1111111111000 001111111 22345666777777666 3344555566677777777776632 23666677777
Q ss_pred EEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCC-chhccCCCCCCEEEccCCC
Q 003931 155 VELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGL-PLSLSNLSKLNDLGLSDNF 233 (785)
Q Consensus 155 L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L~L~~n~ 233 (785)
|||++|.++. +..+=.++.++++|.++.|.+... ..++.+-+|..|++.+|+|.... ...+++++.|+.+.|.+|.
T Consensus 334 LDLS~N~Ls~-~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 334 LDLSGNLLAE-CVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred eecccchhHh-hhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 7777776653 223334556677777777766422 34556666777777777776432 3456777777778887777
Q ss_pred Ccc
Q 003931 234 LSG 236 (785)
Q Consensus 234 l~~ 236 (785)
+.+
T Consensus 411 l~~ 413 (490)
T KOG1259|consen 411 LAG 413 (490)
T ss_pred ccc
Confidence 763
No 36
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.99 E-value=2.7e-10 Score=131.17 Aligned_cols=287 Identities=23% Similarity=0.245 Sum_probs=150.5
Q ss_pred CCCcEEEccCCCCcccCCccCCCCCCccEEECCCCC--CcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcE
Q 003931 53 PSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNK--LSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLID 130 (785)
Q Consensus 53 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~--i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 130 (785)
...+...+-+|.+..+. .. ..++.|++|-+.+|. +. .++..+|..++.|++|||++|.--+..|..++.+-+|++
T Consensus 523 ~~~rr~s~~~~~~~~~~-~~-~~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIA-GS-SENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchhhcc-CC-CCCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 45566666666554222 11 123467777777664 33 566666677777777777776655667777777777777
Q ss_pred EEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcC--cccCCccccCCcccCeeecccc
Q 003931 131 LRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNAL--NYTIPPELGLCTNLSYLALAVN 208 (785)
Q Consensus 131 L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l--~~~~~~~~~~l~~L~~L~l~~n 208 (785)
|+++++.+. .+|..+++++.|.+|++..+.-...+|.....+++|++|.+..-.. +...-..+..+.+|+.+.....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 777777776 5666777777777777777655444555566677777777655431 1112222334444444444322
Q ss_pred ccccCCchhccCCCCCC----EEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcC------CCCCcEEEC
Q 003931 209 QLSGGLPLSLSNLSKLN----DLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGL------LTKLQYLFL 278 (785)
Q Consensus 209 ~i~~~~~~~l~~l~~L~----~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~------l~~L~~L~L 278 (785)
.. .+-..+..+.+|. .+.+.++... ..+.. ++.+.+|+.|.+.++.+.......... ++.+..+..
T Consensus 679 s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~-~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~ 754 (889)
T KOG4658|consen 679 SV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISS-LGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSI 754 (889)
T ss_pred hh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecc-cccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHh
Confidence 22 1111122222222 2222222222 11222 566777777777777765332222111 222333333
Q ss_pred cCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCC-CCCCCCCCCCCCEE
Q 003931 279 YRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGT-IPPEIGSMASLVAF 348 (785)
Q Consensus 279 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L 348 (785)
.++..- ..+.+....++|+.|.+..+.....+.+....+..+..+.+..+.+.+. .-...+.++++..+
T Consensus 755 ~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~ 824 (889)
T KOG4658|consen 755 LNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWL 824 (889)
T ss_pred hccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEec
Confidence 333221 2233334457788888877766655555555555666555555555544 23333444444433
No 37
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.98 E-value=3.8e-11 Score=117.10 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=110.2
Q ss_pred CCCCCCccEEECCCCCCcccCCh---hhhcCCCCCcEEECCCCCCcc----cCC-------ccccCCCCCcEEEcCCCcc
Q 003931 73 ILTCRNLTYLDLSLNKLSGLIPE---RLFTNLGKLEYLNLTENQFQG----KLS-------PNVSKLSNLIDLRLATNKF 138 (785)
Q Consensus 73 ~~~l~~L~~L~Ls~n~i~~~~~~---~~f~~l~~L~~L~Ls~n~i~~----~~~-------~~~~~l~~L~~L~L~~n~~ 138 (785)
......++.++||+|.+...-.. ....+.+.|+..+++.- ++| .+| .++..+++|++|+||.|.+
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 34456777778887766422111 12345566666666542 222 122 1233445555555555554
Q ss_pred cccCCcC----CCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccC-
Q 003931 139 SGPIPGD----IGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGG- 213 (785)
Q Consensus 139 ~~~~~~~----l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~- 213 (785)
.-..+.. +.++..|++|.|.+|.+...-...++. .|.+|. . ....+.-+.|+++....|++...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~-------~kk~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--V-------NKKAASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--H-------HhccCCCcceEEEEeecccccccc
Confidence 4222211 234445555555555443111111110 011111 0 01122334555665555555432
Q ss_pred ---CchhccCCCCCCEEEccCCCCccc---cCccccCCCCCCCEEEeecCcCccc----CCccCcCCCCCcEEECcCccc
Q 003931 214 ---LPLSLSNLSKLNDLGLSDNFLSGE---ISANLIGNWTELESLQIQNNSFMGN----IPPEIGLLTKLQYLFLYRNNF 283 (785)
Q Consensus 214 ---~~~~l~~l~~L~~L~L~~n~l~~~---~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l 283 (785)
+...|...+.|+.+.++.|.|... +-...+..+++|++|+|.+|.++.. +...+..++.|+++++++|.+
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll 253 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLL 253 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccc
Confidence 122344445566666666655321 1111245556666666666655432 122344455666666666655
Q ss_pred cccCChhc-----cCCCCCCEEECcCCccccc----CCccCcCCCCCCEEEcccccc
Q 003931 284 SGPIPSEI-----EKLTSLENLDLSGNQLSGT----IPPTLWNLTNLLSLQLFSNNL 331 (785)
Q Consensus 284 ~~~~p~~~-----~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l 331 (785)
......+| ...++|+.|.+.+|.++.. +...+...+.|..|+|++|.+
T Consensus 254 ~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 254 ENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 43322222 1245666666666655421 111233345555555555554
No 38
>PLN03150 hypothetical protein; Provisional
Probab=98.98 E-value=8.4e-10 Score=124.80 Aligned_cols=110 Identities=33% Similarity=0.531 Sum_probs=80.8
Q ss_pred CCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCCCCCCCCCCCCCCEEEcc
Q 003931 272 KLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGTIPPEIGSMASLVAFDVN 351 (785)
Q Consensus 272 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 351 (785)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.+.|.+|..++.+++|+.|++++|++++.+|..++.+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCcCccccCcccccc-CCCcEEEecCccccc
Q 003931 352 TNQLHGELPENISRL-VKLNKFSVFTNNFSG 381 (785)
Q Consensus 352 ~n~l~~~~~~~~~~l-~~L~~l~l~~n~l~~ 381 (785)
+|.+.|.+|..+... .++..+++.+|....
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcccc
Confidence 777777777766543 355667777775443
No 39
>PLN03150 hypothetical protein; Provisional
Probab=98.96 E-value=8e-10 Score=124.94 Aligned_cols=107 Identities=39% Similarity=0.652 Sum_probs=67.6
Q ss_pred CCeeecccCccccCCCcccccCCCCCeecccCCcccCcCCcccccCCCCCeEecCCCcCccCCCccccccCCCcEEeCCC
Q 003931 514 LGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNNHLTGEIPKSISNLTELAYLDLSNNKLTGDVPQELGRFDKLLSLNLSH 593 (785)
Q Consensus 514 L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ls~ 593 (785)
++.|+|++|.+.+.+|..++.+++|+.|+|++|.+.|.+|..+..+++|+.|++++|++++.+|+.++.+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CcCcccCCcccchhh-hhhheeecccccC
Q 003931 594 NDLSGEIPSNLGNLF-VLQYMLDLSSNSL 621 (785)
Q Consensus 594 N~l~~~~p~~~~~l~-~l~~~l~ls~n~l 621 (785)
|+++|.+|..++.+. .+. .+++++|..
T Consensus 500 N~l~g~iP~~l~~~~~~~~-~l~~~~N~~ 527 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRA-SFNFTDNAG 527 (623)
T ss_pred CcccccCChHHhhccccCc-eEEecCCcc
Confidence 666666666655432 122 255666653
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.91 E-value=1.4e-10 Score=125.39 Aligned_cols=247 Identities=26% Similarity=0.262 Sum_probs=162.9
Q ss_pred cCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCc
Q 003931 26 SSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLE 105 (785)
Q Consensus 26 ~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~ 105 (785)
..+..++.+++..|.|..+. ..+..+.+|..|++.+|.|..+.. .+..+++|++|++++|.|+. +.. +..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~-~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~-i~~--l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKIL-NHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITK-LEG--LSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhhhhh-cccccccceeeeeccccchhhccc-chhhhhcchheecccccccc-ccc--hhhccchh
Confidence 34566666667777776632 345667778888888887775532 25667788888888888873 332 25667788
Q ss_pred EEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCC-cCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEEcccC
Q 003931 106 YLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIP-GDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLDLRMN 184 (785)
Q Consensus 106 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n 184 (785)
.|++++|.|... ..+..++.|+.+++++|.+....+ . ...+.+++.+.+.+|.+... ..+..+..+..+++..|
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDN 218 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccc
Confidence 888888887733 345557788888888888875443 2 46778888888888877633 33455556666677888
Q ss_pred cCcccCCccccCCcc--cCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCccc
Q 003931 185 ALNYTIPPELGLCTN--LSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGN 262 (785)
Q Consensus 185 ~l~~~~~~~~~~l~~--L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 262 (785)
.++..-+ +..+.. |+.+++++|.+.. .+..+..+..+..+++.+|++... .. +...+.+..+....+.+...
T Consensus 219 ~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 292 (414)
T KOG0531|consen 219 KISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL-EG--LERLPKLSELWLNDNKLALS 292 (414)
T ss_pred cceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc-cc--ccccchHHHhccCcchhcch
Confidence 7764322 222333 7888888888873 234566778888888888887632 21 44556666777777765522
Q ss_pred ---CCcc-CcCCCCCcEEECcCccccccCC
Q 003931 263 ---IPPE-IGLLTKLQYLFLYRNNFSGPIP 288 (785)
Q Consensus 263 ---~~~~-~~~l~~L~~L~L~~n~l~~~~p 288 (785)
.... .+..+.++.+.+..|......+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 293 EAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhhhccccccccccccccccccCccccccc
Confidence 1121 4567788888998888765444
No 41
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.90 E-value=1.7e-10 Score=124.76 Aligned_cols=242 Identities=29% Similarity=0.325 Sum_probs=114.0
Q ss_pred CCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 003931 101 LGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNLQHLD 180 (785)
Q Consensus 101 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~ 180 (785)
+..++.+++..|.+.. ....+..+++|..|++.+|++... ...+..+++|++|++++|.|+.. ..+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhhe
Confidence 3344444444444442 222344445555555555555422 11144455555555555555533 2244444555555
Q ss_pred cccCcCcccCCccccCCcccCeeeccccccccCCc-hhccCCCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcC
Q 003931 181 LRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLP-LSLSNLSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSF 259 (785)
Q Consensus 181 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 259 (785)
+++|.++.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+.+.+|.+. .+.. +..+..+..+++..|.+
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~-~i~~--~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR-EIEG--LDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh-cccc--hHHHHHHHHhhcccccc
Confidence 555555422 233335555555555555553322 1 345555566666666554 2111 22333344445555555
Q ss_pred cccCCccCcCCC--CCcEEECcCccccccCChhccCCCCCCEEECcCCcccccCCccCcCCCCCCEEEcccccccCC---
Q 003931 260 MGNIPPEIGLLT--KLQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLSGTIPPTLWNLTNLLSLQLFSNNLSGT--- 334 (785)
Q Consensus 260 ~~~~~~~~~~l~--~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--- 334 (785)
+..-+ +..+. .|+.+++++|.+.. .+..+..+..+..+++++|++... ..+...+.+..+....|.+...
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhh
Confidence 53322 11222 26666677766652 224455566666677776666533 1234444555555555554421
Q ss_pred CCCC-CCCCCCCCEEEccCCcCcc
Q 003931 335 IPPE-IGSMASLVAFDVNTNQLHG 357 (785)
Q Consensus 335 ~p~~-~~~l~~L~~L~l~~n~l~~ 357 (785)
.... ....+.+....+..|.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred hccccccccccccccccccCcccc
Confidence 1111 3344455555555554443
No 42
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=2.1e-09 Score=81.03 Aligned_cols=59 Identities=39% Similarity=0.434 Sum_probs=31.0
Q ss_pred CCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCC
Q 003931 30 KVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNK 88 (785)
Q Consensus 30 ~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 88 (785)
+|++|++++|+++.+++++|.++++|++|++++|.++.+.+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555555555555555555555555555555555555555555555555554
No 43
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3e-09 Score=80.16 Aligned_cols=60 Identities=32% Similarity=0.398 Sum_probs=35.9
Q ss_pred CCCcEEEccCCCCCCCccccccCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCC
Q 003931 5 SELQYLSVYDNNLNGAIPFQLSSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNE 64 (785)
Q Consensus 5 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~ 64 (785)
++|++|++++|+++.+.+..|.++++|++|++++|.++.+++++|.++++|++|++++|.
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 345566666666665555556666666666666666666655566666666666666554
No 44
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=98.77 E-value=4.5e-09 Score=109.16 Aligned_cols=86 Identities=26% Similarity=0.396 Sum_probs=63.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|....++.|.|+|||||||+|.|++| ||-|.. .++.+.+.. +|..+ ..|-..+.+|...|
T Consensus 373 PEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy--------Rlp~P----~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 373 PEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY--------RLPRP----EGCPDEVYELMKSC 440 (468)
T ss_pred HHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC--------cCCCC----CCCCHHHHHHHHHH
Confidence 377778899999999999999999999 787732 233322221 22222 23445677889999
Q ss_pred CCCCCCCCCChHHHHHHHHhccccc
Q 003931 743 TSTTPDTRPSMRFVAQELSAKTQAY 767 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~~~~~~ 767 (785)
+..+|++|||.......++++....
T Consensus 441 W~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred hhCCcccCCCHHHHHHHHHHhhhcc
Confidence 9999999999998888888876543
No 45
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.72 E-value=7.9e-09 Score=107.50 Aligned_cols=89 Identities=26% Similarity=0.350 Sum_probs=56.4
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
...+++|+||||||||+.|++||+.|..-...+.- ...++.......... .+--.+..+.-.|++.+|++||++.
T Consensus 220 ~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~---~~~v~~~~~Rp~~p~--~~~~~l~~l~~~CW~~dp~~RP~f~ 294 (362)
T KOG0192|consen 220 KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV---ASAVVVGGLRPPIPK--ECPPHLSSLMERCWLVDPSRRPSFL 294 (362)
T ss_pred CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHhcCCCCCCCc--cCCHHHHHHHHHhCCCCCCcCCCHH
Confidence 56789999999999999999999999641111100 001111111100000 0222233444559999999999999
Q ss_pred HHHHHHHhcccccC
Q 003931 755 FVAQELSAKTQAYL 768 (785)
Q Consensus 755 ~vv~~l~~~~~~~~ 768 (785)
+++.+|+.+...+.
T Consensus 295 ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 295 EIVSRLESIMSHIS 308 (362)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998766544
No 46
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.56 E-value=2.8e-08 Score=108.84 Aligned_cols=87 Identities=29% Similarity=0.410 Sum_probs=64.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCccccccccc----CCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLD----QRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d----~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
|--.-++.|+++|||||||||-|++| ||.|.. +..-.||++ .++.. ..+.|-.+|..+.+.|+++
T Consensus 675 EsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~-------glSn~EVIe~i~~g~lL~---~Pe~CP~~vY~LM~~CW~~ 744 (774)
T KOG1026|consen 675 ESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY-------GLSNQEVIECIRAGQLLS---CPENCPTEVYSLMLECWNE 744 (774)
T ss_pred HHhhcCcccchhhhhhhhhhhhhhhccccCccc-------ccchHHHHHHHHcCCccc---CCCCCCHHHHHHHHHHhhc
Confidence 55667899999999999999999999 899942 111122222 12211 2345667788999999999
Q ss_pred CCCCCCChHHHHHHHHhccccc
Q 003931 746 TPDTRPSMRFVAQELSAKTQAY 767 (785)
Q Consensus 746 ~p~~Rp~m~~vv~~l~~~~~~~ 767 (785)
.|++||+..|+-..|+...+..
T Consensus 745 ~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 745 NPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred CcccCCCHHHHHHHHHHHHhcC
Confidence 9999999999999998765543
No 47
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.54 E-value=3.4e-08 Score=93.67 Aligned_cols=94 Identities=21% Similarity=0.231 Sum_probs=57.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC--ccccccc--ccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG--ELFLKDV--LDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~--~~~~~~~--~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
+|+-.....+.|+|||||||++.|++||+.|..-...... ....... .++.-. ...........+.++...|.+.
T Consensus 73 PE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~cl~~ 151 (176)
T smart00750 73 PEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDR-SNLESVSAARSFADFMRVCASR 151 (176)
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccc-ccHHHHHhhhhHHHHHHHHHhc
Confidence 3555556678899999999999999999999531111000 0000000 011100 0001111112467788899999
Q ss_pred CCCCCCChHHHHHHHHhcc
Q 003931 746 TPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 746 ~p~~Rp~m~~vv~~l~~~~ 764 (785)
+|++||++.|+++.+..+.
T Consensus 152 ~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 152 LPQRREAANHYLAHCRALF 170 (176)
T ss_pred ccccccCHHHHHHHHHHHH
Confidence 9999999999999876553
No 48
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.53 E-value=1.3e-08 Score=103.32 Aligned_cols=85 Identities=26% Similarity=0.392 Sum_probs=51.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.|+||||||++++|++| |+.|..-. ........+.+......... +-..+.++...|++.+|+
T Consensus 174 PE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~C~~~~p~ 247 (259)
T PF07714_consen 174 PEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY---DNEEIIEKLKQGQRLPIPDN---CPKDIYSLIQQCWSHDPE 247 (259)
T ss_dssp HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS---CHHHHHHHHHTTEETTSBTT---SBHHHHHHHHHHT-SSGG
T ss_pred cccccccccccccccccccccccccccccccccccc---ccccccccccccccceeccc---hhHHHHHHHHHHcCCChh
Confidence 466666778999999999999999999 67774200 00000111111111100001 112345778899999999
Q ss_pred CCCChHHHHHHH
Q 003931 749 TRPSMRFVAQEL 760 (785)
Q Consensus 749 ~Rp~m~~vv~~l 760 (785)
+||+|.+++++|
T Consensus 248 ~RPs~~~i~~~L 259 (259)
T PF07714_consen 248 KRPSFQEILQEL 259 (259)
T ss_dssp GS--HHHHHHHH
T ss_pred hCcCHHHHHhcC
Confidence 999999999876
No 49
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.52 E-value=8e-08 Score=99.02 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=58.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchh--------hhccCc---ccccccccCCCCCCCchhHHHHHHHHHHH
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELI--------TSLSGE---LFLKDVLDQRLPPPTGQLAEAVVLTINVA 739 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~--------~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~ia 739 (785)
|+......+.|+|||||||++.|++||+.|.... .+.... ....+.++.....+. .......+.++.
T Consensus 180 E~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li 257 (283)
T cd05080 180 ECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC--PKNCPQEVYILM 257 (283)
T ss_pred hHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC--CCCCCHHHHHHH
Confidence 4444456788999999999999999999985311 110000 011112222111110 011224567789
Q ss_pred hhcCCCCCCCCCChHHHHHHHHhcc
Q 003931 740 LACTSTTPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 740 l~C~~~~p~~Rp~m~~vv~~l~~~~ 764 (785)
..|.+.+|++||+|.+|+++|+++.
T Consensus 258 ~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 258 KNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred HHHhccChhhCCCHHHHHHHHHHhh
Confidence 9999999999999999999998764
No 50
>PHA02988 hypothetical protein; Provisional
Probab=98.47 E-value=5.2e-08 Score=100.21 Aligned_cols=78 Identities=27% Similarity=0.325 Sum_probs=53.2
Q ss_pred cccccccceeeeehhhhhhhhCCCCCch------hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGEL------ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~------~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
...+.|+|||||||++.|++||+.|.+- ...+.... ..+.+.. . +-..+-++.-.|++.+|++
T Consensus 197 ~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~-----~~~~~~~---~---~~~~l~~li~~cl~~dp~~ 265 (283)
T PHA02988 197 SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKN-----NSLKLPL---D---CPLEIKCIVEACTSHDSIK 265 (283)
T ss_pred ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC-----CCCCCCC---c---CcHHHHHHHHHHhcCCccc
Confidence 4678999999999999999999999541 11110000 0111110 0 1112446677899999999
Q ss_pred CCChHHHHHHHHhcc
Q 003931 750 RPSMRFVAQELSAKT 764 (785)
Q Consensus 750 Rp~m~~vv~~l~~~~ 764 (785)
||+|.||++.|+..+
T Consensus 266 Rps~~ell~~l~~~~ 280 (283)
T PHA02988 266 RPNIKEILYNLSLYK 280 (283)
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999998764
No 51
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=2.4e-09 Score=113.89 Aligned_cols=180 Identities=31% Similarity=0.329 Sum_probs=111.1
Q ss_pred cccccCCCCCCEEeCCCCCCCCCCccccCCC-CCCcEEEccCCCCc---ccCCcc---CCC---CCCccEEECCCCCCcc
Q 003931 22 PFQLSSLRKVRYLDLGGNFLETPDWSKFSSM-PSLTHLGLYLNELT---LEFPSF---ILT---CRNLTYLDLSLNKLSG 91 (785)
Q Consensus 22 ~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l-~~L~~L~L~~n~i~---~~~~~~---~~~---l~~L~~L~Ls~n~i~~ 91 (785)
|-++-.++.||+|.+.++.+.... .+..+ ..|+.|.-.+ .++ .++... |.+ --.|.+.+.++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~--GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAK--GLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhhh--hhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 445667788888888888765421 22221 2344443221 111 111111 111 125777778888776
Q ss_pred cCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCcccc
Q 003931 92 LIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLG 171 (785)
Q Consensus 92 ~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~ 171 (785)
.+...+ .-++.|+.|||++|+++... .+..|++|+.|||+.|.+.....-...+|+ |+.|.+.+|.++.. ..+.
T Consensus 178 ~mD~SL-qll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 LMDESL-QLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred hHHHHH-HHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHH
Confidence 344333 66788888888888887433 677888888888888888743322334454 88888888887743 3567
Q ss_pred CCCCCCEEEcccCcCcccCC-ccccCCcccCeeeccccccc
Q 003931 172 QLKNLQHLDLRMNALNYTIP-PELGLCTNLSYLALAVNQLS 211 (785)
Q Consensus 172 ~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~ 211 (785)
++.+|+.||+++|-+.+... ..++.+..|+.|+|.+|.+-
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 88888888888887764321 22455667788888888764
No 52
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.45 E-value=5.2e-08 Score=99.54 Aligned_cols=87 Identities=24% Similarity=0.329 Sum_probs=56.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++|||||||+++|++| |+.|...... +.....+... ...+ ...+.-..+.+++..|.+.+|++
T Consensus 180 E~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~i~~~-~~~~--~~~~~~~~~~~li~~c~~~~p~~ 253 (268)
T cd05063 180 EAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKAINDG-FRLP--APMDCPSAVYQLMLQCWQQDRAR 253 (268)
T ss_pred HHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHHhcC-CCCC--CCCCCCHHHHHHHHHHcCCCccc
Confidence 44445567889999999999999998 9999531100 0000111110 0000 01112234678899999999999
Q ss_pred CCChHHHHHHHHhc
Q 003931 750 RPSMRFVAQELSAK 763 (785)
Q Consensus 750 Rp~m~~vv~~l~~~ 763 (785)
||+|.+|++.|.++
T Consensus 254 Rp~~~~i~~~l~~~ 267 (268)
T cd05063 254 RPRFVDIVNLLDKL 267 (268)
T ss_pred CcCHHHHHHHHHhh
Confidence 99999999999875
No 53
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.42 E-value=6.2e-08 Score=99.89 Aligned_cols=92 Identities=20% Similarity=0.271 Sum_probs=59.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCch-----hhhccC---cc---cccccccCCCCCCCchhHHHHHHHHHHH
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGEL-----ITSLSG---EL---FLKDVLDQRLPPPTGQLAEAVVLTINVA 739 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~-----~~~~~~---~~---~~~~~~d~~l~~~~~~~~~~~~~~~~ia 739 (785)
|+.....++.++||||||+++.|++||+.|..- ..++.. .. ...+.+......+ ....+...+.+++
T Consensus 182 e~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li 259 (284)
T cd05038 182 ECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP--RPPSCPDEVYDLM 259 (284)
T ss_pred HHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCC--CCccCCHHHHHHH
Confidence 444556778899999999999999999998541 111000 00 0111111111110 0111224567889
Q ss_pred hhcCCCCCCCCCChHHHHHHHHhcc
Q 003931 740 LACTSTTPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 740 l~C~~~~p~~Rp~m~~vv~~l~~~~ 764 (785)
..|...+|++||+|.||+++|++++
T Consensus 260 ~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 260 KLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHhccChhhCCCHHHHHHHHhhcC
Confidence 9999999999999999999998864
No 54
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.42 E-value=1.1e-07 Score=98.56 Aligned_cols=84 Identities=24% Similarity=0.373 Sum_probs=57.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.|+|||||||++.|++| |+.|.. ....... ........ .+...+.++...|+
T Consensus 195 E~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~li~~~l 262 (291)
T cd05094 195 ESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ---------GRVLERPR---VCPKEVYDIMLGCW 262 (291)
T ss_pred HHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC---------CCCCCCCc---cCCHHHHHHHHHHc
Confidence 44445667889999999999999999 999853 1111111 01100000 01123567889999
Q ss_pred CCCCCCCCChHHHHHHHHhcccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~~ 766 (785)
+.+|++||+|.+|+++|.++...
T Consensus 263 ~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 263 QREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ccChhhCcCHHHHHHHHHHHHhh
Confidence 99999999999999999998553
No 55
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.42 E-value=1e-07 Score=108.67 Aligned_cols=84 Identities=30% Similarity=0.428 Sum_probs=62.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+-..+..|+|+|||||||++-|++| |..|.. +...|.+++ +|..+ ..|-.++.+|...|+
T Consensus 874 Esl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg--------RL~~P----~~CP~~ly~lM~~CW 941 (1025)
T KOG1095|consen 874 ESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG--------RLDPP----SYCPEKLYQLMLQCW 941 (1025)
T ss_pred HHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC--------ccCCC----CCCChHHHHHHHHHc
Confidence 77788999999999999999999999 566632 222222222 33322 234456678999999
Q ss_pred CCCCCCCCChHHHHHHHHhcccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~~ 766 (785)
+.+|++||+.++++..+..|...
T Consensus 942 ~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 942 KHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred cCChhhCccHHHHHhhhhhhhhh
Confidence 99999999999999998877543
No 56
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=3.4e-09 Score=101.05 Aligned_cols=176 Identities=22% Similarity=0.190 Sum_probs=77.5
Q ss_pred CcEEEccCCCCcccC-CccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCC-Ccc-cCCccccCCCCCcEE
Q 003931 55 LTHLGLYLNELTLEF-PSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQ-FQG-KLSPNVSKLSNLIDL 131 (785)
Q Consensus 55 L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~-i~~-~~~~~~~~l~~L~~L 131 (785)
|+++||+...|+... -..+..|.+|+.|.+.++++.+.+...+ +.-.+|+.|+|+.+. ++. ...-.+..|+.|..|
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~i-AkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTI-AKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHH-hccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 455555544443111 1123344455555555555544443333 444555555555432 110 011123445555555
Q ss_pred EcCCCcccccC-CcCCCC-CCCCCEEEcccCccc---ccCCccccCCCCCCEEEcccCc-CcccCCccccCCcccCeeec
Q 003931 132 RLATNKFSGPI-PGDIGS-MSNLQLVELFNNSFT---GQIPSSLGQLKNLQHLDLRMNA-LNYTIPPELGLCTNLSYLAL 205 (785)
Q Consensus 132 ~L~~n~~~~~~-~~~l~~-l~~L~~L~L~~n~~~---~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l 205 (785)
++++|.+.... ...+.. -++|..|+++++.-. ..+..-..++++|.+|||++|. ++......|.+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 55555443211 001111 134555555554211 1111123455666666666654 22222334455666666666
Q ss_pred cccccccCCchh---ccCCCCCCEEEccCCC
Q 003931 206 AVNQLSGGLPLS---LSNLSKLNDLGLSDNF 233 (785)
Q Consensus 206 ~~n~i~~~~~~~---l~~l~~L~~L~L~~n~ 233 (785)
+.|.. .+|.. +...+.|.+|++.++-
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEecccc
Confidence 65542 33332 3455667777666553
No 57
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.39 E-value=1.2e-07 Score=97.61 Aligned_cols=87 Identities=21% Similarity=0.342 Sum_probs=55.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.|+|||||||++.|++| |+.|..-.. .....+.+....... ....+-..+.++...|++.+|+
T Consensus 195 PE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~----~~~~~~~i~~~~~~~--~~~~~~~~~~~l~~~c~~~~p~ 268 (283)
T cd05048 195 PEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS----NQEVIEMIRSRQLLP--CPEDCPARVYALMIECWNEIPA 268 (283)
T ss_pred HHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHHcCCcCC--CcccCCHHHHHHHHHHccCChh
Confidence 355555677899999999999999998 998853100 000111111110000 0011223456778899999999
Q ss_pred CCCChHHHHHHHHh
Q 003931 749 TRPSMRFVAQELSA 762 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~ 762 (785)
+||+|+||++.|+.
T Consensus 269 ~Rp~~~~i~~~l~~ 282 (283)
T cd05048 269 RRPRFKDIHTRLRS 282 (283)
T ss_pred hCcCHHHHHHHHhc
Confidence 99999999999875
No 58
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=4.7e-09 Score=100.16 Aligned_cols=177 Identities=23% Similarity=0.253 Sum_probs=123.4
Q ss_pred CCCEEEcccCcCccc-CCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCC-CccccCccccCCCCCCCEE
Q 003931 175 NLQHLDLRMNALNYT-IPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNF-LSGEISANLIGNWTELESL 252 (785)
Q Consensus 175 ~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L~~L 252 (785)
.|++|||+...++.. ....+..|.+|+.|.+.++++.+.+...+++..+|+.|+++.+. ++..--.-.+.+++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 588899988877632 22345678899999999999988888888888999999998874 3322222346788999999
Q ss_pred EeecCcCcccCCcc-Cc-CCCCCcEEECcCccc--c-ccCChhccCCCCCCEEECcCCc-ccccCCccCcCCCCCCEEEc
Q 003931 253 QIQNNSFMGNIPPE-IG-LLTKLQYLFLYRNNF--S-GPIPSEIEKLTSLENLDLSGNQ-LSGTIPPTLWNLTNLLSLQL 326 (785)
Q Consensus 253 ~L~~n~l~~~~~~~-~~-~l~~L~~L~L~~n~l--~-~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~L 326 (785)
++++|.+....-.. +. --++|+.|+|+++.- . ..+..-...+++|.+||||+|. ++...-..|..++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 99999876543221 11 125788888888732 1 1222233568999999999874 44333445778889999999
Q ss_pred ccccccCCCCCC---CCCCCCCCEEEccCC
Q 003931 327 FSNNLSGTIPPE---IGSMASLVAFDVNTN 353 (785)
Q Consensus 327 ~~n~l~~~~p~~---~~~l~~L~~L~l~~n 353 (785)
+.|.. ++|.. +...++|.+||+.++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 98864 45543 466788888887654
No 59
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.36 E-value=1.6e-07 Score=95.24 Aligned_cols=82 Identities=26% Similarity=0.406 Sum_probs=57.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|.......+.++|||||||++.|++| |+.|.+ +..++..... ...+. .....+.++...|+
T Consensus 168 E~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~l~~li~~cl 235 (257)
T cd05060 168 ECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER--------LPRPE----ECPQEIYSIMLSCW 235 (257)
T ss_pred HHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--------CCCCC----CCCHHHHHHHHHHh
Confidence 44455667889999999999999998 898854 2222211110 00000 11134567889999
Q ss_pred CCCCCCCCChHHHHHHHHhcc
Q 003931 744 STTPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~ 764 (785)
..+|++||++.+|++.|+++.
T Consensus 236 ~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 236 KYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred cCChhhCcCHHHHHHHHHhcc
Confidence 999999999999999998864
No 60
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.36 E-value=1.8e-07 Score=96.21 Aligned_cols=87 Identities=26% Similarity=0.416 Sum_probs=56.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.++|||||||+++|++| |+.|..-.... ...+++.. ....+. .+...+.++...|.+.+|
T Consensus 181 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~li~~c~~~~p 252 (279)
T cd05111 181 ESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDLLEKGERLAQPQ----ICTIDVYMVMVKCWMIDE 252 (279)
T ss_pred HHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcCCCCC----CCCHHHHHHHHHHcCCCc
Confidence 44445667899999999999999998 98885311000 00111110 000000 011234567789999999
Q ss_pred CCCCChHHHHHHHHhccc
Q 003931 748 DTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~~~ 765 (785)
++||+|.|++++|..+..
T Consensus 253 ~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 253 NVRPTFKELANEFTRMAR 270 (279)
T ss_pred ccCcCHHHHHHHHHHHHh
Confidence 999999999999988654
No 61
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=1.5e-07 Score=90.01 Aligned_cols=227 Identities=22% Similarity=0.197 Sum_probs=108.1
Q ss_pred CccEEECCCCCCcccCChhhh-cCCCCCcEEECCCCCCcc--cCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCE
Q 003931 78 NLTYLDLSLNKLSGLIPERLF-TNLGKLEYLNLTENQFQG--KLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQL 154 (785)
Q Consensus 78 ~L~~L~Ls~n~i~~~~~~~~f-~~l~~L~~L~Ls~n~i~~--~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 154 (785)
.+..+-+.++.|...-....| ..++.++++||.+|.|+. .+...+.+++.|+.|+++.|.+...+...-....+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 444555555555422111112 235566777777776662 22233456677777777777666332211134567777
Q ss_pred EEcccCcccc-cCCccccCCCCCCEEEcccCcCcccC--Ccccc-CCcccCeeeccccccccCCchhccCCCCCCEEEcc
Q 003931 155 VELFNNSFTG-QIPSSLGQLKNLQHLDLRMNALNYTI--PPELG-LCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLS 230 (785)
Q Consensus 155 L~L~~n~~~~-~~~~~l~~l~~L~~L~l~~n~l~~~~--~~~~~-~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~ 230 (785)
|-|.+..+.- .....+..+|.++.|.++.|.+...- .+... --+.+++++...|.. .+..+
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~---------------~~w~~ 190 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLE---------------QLWLN 190 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHH---------------HHHHH
Confidence 7777765542 12234556677777777766432100 00000 011223332222211 11111
Q ss_pred CCCCccccCccccCCCCCCCEEEeecCcCccc-CCccCcCCCCCcEEECcCccccc-cCChhccCCCCCCEEECcCCccc
Q 003931 231 DNFLSGEISANLIGNWTELESLQIQNNSFMGN-IPPEIGLLTKLQYLFLYRNNFSG-PIPSEIEKLTSLENLDLSGNQLS 308 (785)
Q Consensus 231 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~n~l~ 308 (785)
-|++. .-++++..+.+..|.+... ....+..++.+--|+|+.|++.. .--+++..+++|..|.+++|++.
T Consensus 191 ~~~l~--------r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 191 KNKLS--------RIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred HHhHH--------hhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 22211 1233444444444433221 11223344555566666666632 11244566777777777777766
Q ss_pred ccCCc------cCcCCCCCCEEEcc
Q 003931 309 GTIPP------TLWNLTNLLSLQLF 327 (785)
Q Consensus 309 ~~~p~------~l~~l~~L~~L~L~ 327 (785)
+..-. -++.+++++.|+=+
T Consensus 263 d~l~~~err~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 263 DPLRGGERRFLLIARLTKVQVLNGS 287 (418)
T ss_pred ccccCCcceEEEEeeccceEEecCc
Confidence 44322 24567777776533
No 62
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.35 E-value=2.4e-07 Score=94.25 Aligned_cols=88 Identities=23% Similarity=0.248 Sum_probs=55.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||+++|++| |+.|......-...........+.... . .-..+.++...|.+.+|+
T Consensus 174 PE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~li~~cl~~~p~ 247 (263)
T cd05052 174 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPE---G---CPPKVYELMRACWQWNPS 247 (263)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCC---C---CCHHHHHHHHHHccCCcc
Confidence 455555677889999999999999999 888853110000000000001111111 1 112355677899999999
Q ss_pred CCCChHHHHHHHHhc
Q 003931 749 TRPSMRFVAQELSAK 763 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~ 763 (785)
+||+|.+|.++|+.+
T Consensus 248 ~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 248 DRPSFAEIHQAFETM 262 (263)
T ss_pred cCCCHHHHHHHHHhh
Confidence 999999999999764
No 63
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.35 E-value=1.3e-07 Score=100.26 Aligned_cols=91 Identities=25% Similarity=0.324 Sum_probs=57.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.|+|||||||++.|++| |+.|..-... .+.....+.+........ ..-..+.+++..|.+.+|+
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI--NEEFCQRLKDGTRMRAPE---NATPEIYRIMLACWQGDPK 319 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHccCChh
Confidence 354455667899999999999999997 9988531100 000000011111000000 1112356788999999999
Q ss_pred CCCChHHHHHHHHhccc
Q 003931 749 TRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~~~ 765 (785)
+||+|.||+++|+++..
T Consensus 320 ~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 320 ERPTFSALVEILGDLLQ 336 (338)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987643
No 64
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.35 E-value=1.6e-07 Score=97.12 Aligned_cols=82 Identities=28% Similarity=0.421 Sum_probs=56.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++||||||+++.|++| |+.|.+ +..++... ..+.... . .-..+.+++..|.
T Consensus 199 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~------~~~~~~~---~---~~~~~~~~i~~cl 266 (290)
T cd05045 199 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG------YRMERPE---N---CSEEMYNLMLTCW 266 (290)
T ss_pred HHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC------CCCCCCC---C---CCHHHHHHHHHHc
Confidence 44445667899999999999999999 887743 11111110 0011110 1 1123557788999
Q ss_pred CCCCCCCCChHHHHHHHHhcc
Q 003931 744 STTPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~ 764 (785)
+.+|++||+|.||+++|+++-
T Consensus 267 ~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 267 KQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred cCCcccCCCHHHHHHHHHHHH
Confidence 999999999999999998864
No 65
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.33 E-value=2.2e-07 Score=95.62 Aligned_cols=83 Identities=28% Similarity=0.381 Sum_probs=57.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++|||||||++.|++| |+.|.+ +..++...... .... . +-..+.+++..|+
T Consensus 189 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~-~---~~~~~~~li~~~l 256 (280)
T cd05043 189 ESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRL--------AQPI-N---CPDELFAVMACCW 256 (280)
T ss_pred HHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCC--------CCCC-c---CCHHHHHHHHHHc
Confidence 44445567899999999999999999 999864 22222211111 0000 0 1123567888999
Q ss_pred CCCCCCCCChHHHHHHHHhccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~ 765 (785)
..+|++||++.||+++|.++.+
T Consensus 257 ~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 257 ALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999998765
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.32 E-value=2e-07 Score=94.43 Aligned_cols=78 Identities=27% Similarity=0.468 Sum_probs=53.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++|||||||++.|++| |+.|.. .+..+....+ ...+.. ....+.+++..|+
T Consensus 171 E~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~---------~~~~~~~li~~c~ 238 (256)
T cd05114 171 EVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR---LYRPKL---------ASMTVYEVMYSCW 238 (256)
T ss_pred hhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---CCCCCC---------CCHHHHHHHHHHc
Confidence 44444567789999999999999999 888853 1222211110 011111 1124568889999
Q ss_pred CCCCCCCCChHHHHHHH
Q 003931 744 STTPDTRPSMRFVAQEL 760 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l 760 (785)
+.+|++||+|.|++++|
T Consensus 239 ~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 239 HEKPEGRPTFAELLRAI 255 (256)
T ss_pred cCCcccCcCHHHHHHhh
Confidence 99999999999999876
No 67
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.32 E-value=1.9e-07 Score=96.31 Aligned_cols=92 Identities=21% Similarity=0.245 Sum_probs=56.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCch--hhhcc---Cccc-------ccccccCCCCCCCchhHHHHHHHHHH
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGEL--ITSLS---GELF-------LKDVLDQRLPPPTGQLAEAVVLTINV 738 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~--~~~~~---~~~~-------~~~~~d~~l~~~~~~~~~~~~~~~~i 738 (785)
|+......+.++|||||||+++|++||+.|... ..+.. .... ..++++.....+ .....-..+.++
T Consensus 181 E~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 258 (284)
T cd05081 181 ESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP--APPGCPAEIYAI 258 (284)
T ss_pred HHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCC--CCCCCCHHHHHH
Confidence 444445677899999999999999999876431 11111 1100 001111110000 000111246678
Q ss_pred HhhcCCCCCCCCCChHHHHHHHHhcc
Q 003931 739 ALACTSTTPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 739 al~C~~~~p~~Rp~m~~vv~~l~~~~ 764 (785)
+..|++.+|++||+|.||+++|+.++
T Consensus 259 i~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 259 MKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHccCChhhCCCHHHHHHHHHhcC
Confidence 88999999999999999999998763
No 68
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.32 E-value=1.2e-08 Score=108.78 Aligned_cols=199 Identities=26% Similarity=0.232 Sum_probs=129.8
Q ss_pred cCCCCCcEEECCCCCCcccC-CccccCCCCCcEEEcCCCcccccCCcCCCCC-CCCCEEEcccCccc----------ccC
Q 003931 99 TNLGKLEYLNLTENQFQGKL-SPNVSKLSNLIDLRLATNKFSGPIPGDIGSM-SNLQLVELFNNSFT----------GQI 166 (785)
Q Consensus 99 ~~l~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l-~~L~~L~L~~n~~~----------~~~ 166 (785)
.-+++++.|.+-.-.-.+.- |-.+..+..|+.|.+.++.+... ..+..+ ..|++|-..+ .+. |.+
T Consensus 81 d~lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~ 157 (1096)
T KOG1859|consen 81 DFLQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDI 157 (1096)
T ss_pred HHHhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhcccc
Confidence 33555555555443322221 55677788899999988887631 111111 2344443222 111 111
Q ss_pred CccccCCCCCCEEEcccCcCcccCCccccCCcccCeeeccccccccCCchhccCCCCCCEEEccCCCCccccCccccCCC
Q 003931 167 PSSLGQLKNLQHLDLRMNALNYTIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSKLNDLGLSDNFLSGEISANLIGNW 246 (785)
Q Consensus 167 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~l 246 (785)
..++ ....|...+.++|.+. .+...+.-++.++.|+|++|+++.. ..+..+++|++|||++|.+. .+|.--...+
T Consensus 158 ~ns~-~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc 232 (1096)
T KOG1859|consen 158 SNSP-VWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC 232 (1096)
T ss_pred ccch-hhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh
Confidence 1111 1236777888888887 5666778888999999999999754 37888999999999999987 6665323344
Q ss_pred CCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCC-hhccCCCCCCEEECcCCccc
Q 003931 247 TELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIP-SEIEKLTSLENLDLSGNQLS 308 (785)
Q Consensus 247 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~ 308 (785)
. |+.|.+++|.++.. ..+.++.+|+.||+++|-+.+.-. ..+..+..|+.|+|.+|++.
T Consensus 233 ~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 233 K-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred h-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 4 99999999988754 357788899999999998764211 22455678889999999876
No 69
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.32 E-value=3.7e-07 Score=94.57 Aligned_cols=89 Identities=21% Similarity=0.291 Sum_probs=56.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||+++|+++ |..|..-... ....+.+....... ....+...+.+++..|++.+|+
T Consensus 203 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~ 276 (293)
T cd05053 203 PEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----EELFKLLKEGYRME--KPQNCTQELYHLMRDCWHEVPS 276 (293)
T ss_pred HHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH----HHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcccCcc
Confidence 455455667899999999999999998 8887421000 00000000000000 0001123456789999999999
Q ss_pred CCCChHHHHHHHHhcc
Q 003931 749 TRPSMRFVAQELSAKT 764 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~~ 764 (785)
+||+|.||++.|+++.
T Consensus 277 ~Rps~~eil~~l~~~~ 292 (293)
T cd05053 277 QRPTFKQLVEDLDRML 292 (293)
T ss_pred cCcCHHHHHHHHHHhh
Confidence 9999999999998763
No 70
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.31 E-value=2.9e-07 Score=94.26 Aligned_cols=87 Identities=18% Similarity=0.266 Sum_probs=55.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++||||||+++.|++| |+.|..-.. .......+.+....... ......+.+++..|.+.+|++
T Consensus 185 e~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~ 258 (273)
T cd05035 185 ESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE---NHEIYDYLRHGNRLKQP---EDCLDELYDLMYSCWRADPKD 258 (273)
T ss_pred hhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCCCCCC---cCCCHHHHHHHHHHcCCChhh
Confidence 44445567889999999999999999 777742100 00001111111110000 112234567778899999999
Q ss_pred CCChHHHHHHHHhc
Q 003931 750 RPSMRFVAQELSAK 763 (785)
Q Consensus 750 Rp~m~~vv~~l~~~ 763 (785)
||+|.||++.|+++
T Consensus 259 Rp~~~e~~~~l~~~ 272 (273)
T cd05035 259 RPTFTKLREVLENI 272 (273)
T ss_pred CcCHHHHHHHHHhh
Confidence 99999999999865
No 71
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.30 E-value=2.4e-07 Score=94.20 Aligned_cols=83 Identities=28% Similarity=0.365 Sum_probs=55.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC-c------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG-E------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~-~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+......+.|+|||||||++.|++||+.|. . ++.++.... ....+. . ....+.++...|
T Consensus 171 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~---~~~~~~~li~~c 238 (262)
T cd05058 171 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR--------RLLQPE-Y---CPDPLYEVMLSC 238 (262)
T ss_pred hhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC--------CCCCCC-c---CCHHHHHHHHHH
Confidence 34444566788999999999999999976652 1 111111110 000000 0 112356788999
Q ss_pred CCCCCCCCCChHHHHHHHHhcc
Q 003931 743 TSTTPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~~~ 764 (785)
.+.+|++||++.||+++++++.
T Consensus 239 l~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 239 WHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred cCCChhhCCCHHHHHHHHHHHh
Confidence 9999999999999999998764
No 72
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.30 E-value=2.6e-07 Score=96.27 Aligned_cols=83 Identities=29% Similarity=0.438 Sum_probs=56.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++|||||||+++|++| |+.|.. +..++.... ....+. .+...+.++...|+
T Consensus 181 E~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~----~~~~~~~~li~~c~ 248 (303)
T cd05110 181 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE--------RLPQPP----ICTIDVYMVMVKCW 248 (303)
T ss_pred HHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC--------CCCCCC----CCCHHHHHHHHHHc
Confidence 44445667889999999999999998 888853 111111110 110000 11234567789999
Q ss_pred CCCCCCCCChHHHHHHHHhccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~ 765 (785)
..+|++||+|.||++++.++..
T Consensus 249 ~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 249 MIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred CCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999987643
No 73
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.29 E-value=2.2e-07 Score=98.14 Aligned_cols=90 Identities=21% Similarity=0.240 Sum_probs=57.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.|+|||||||+++|++| |+.|..-.. ......+.+....... ........+.+++..|++.+|+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ---IDEEFCRRLKEGTRMR--APEYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC---ccHHHHHHHhccCCCC--CCccCCHHHHHHHHHHccCChh
Confidence 455556778999999999999999998 988852100 0000000000000000 0001123466888999999999
Q ss_pred CCCChHHHHHHHHhcc
Q 003931 749 TRPSMRFVAQELSAKT 764 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~~ 764 (785)
+||++.||+++|.++-
T Consensus 319 ~RPs~~ell~~l~~~~ 334 (337)
T cd05054 319 DRPTFSELVEILGDLL 334 (337)
T ss_pred hCcCHHHHHHHHHHHH
Confidence 9999999999998753
No 74
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.29 E-value=2.6e-07 Score=93.96 Aligned_cols=86 Identities=28% Similarity=0.390 Sum_probs=54.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++|||||||+++|++| |+.|..-.. .......++.....+ ........+.+++..|++.+|++
T Consensus 174 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~ 247 (261)
T cd05068 174 EAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT----NAEVLQQVDQGYRMP--CPPGCPKELYDIMLDCWKEDPDD 247 (261)
T ss_pred cccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC----HHHHHHHHHcCCCCC--CCCcCCHHHHHHHHHHhhcCccc
Confidence 44445567899999999999999999 887743000 000000011100000 00011234567888999999999
Q ss_pred CCChHHHHHHHHh
Q 003931 750 RPSMRFVAQELSA 762 (785)
Q Consensus 750 Rp~m~~vv~~l~~ 762 (785)
||+|.++++.|++
T Consensus 248 Rp~~~~l~~~l~~ 260 (261)
T cd05068 248 RPTFETLQWKLED 260 (261)
T ss_pred CCCHHHHHHHHhc
Confidence 9999999999875
No 75
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.28 E-value=3.3e-07 Score=93.72 Aligned_cols=86 Identities=27% Similarity=0.307 Sum_probs=56.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+......+.++|||||||+++|++| |+.|..-... .. ..+.+.. ...... ..-..+.+++..|++.+
T Consensus 180 pE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~-~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~ 251 (270)
T cd05047 180 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AE-LYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREK 251 (270)
T ss_pred hHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---HH-HHHHHhCCCCCCCCC----cCCHHHHHHHHHHcccC
Confidence 355555667889999999999999997 8888531100 00 0000011 110000 11123568889999999
Q ss_pred CCCCCChHHHHHHHHhc
Q 003931 747 PDTRPSMRFVAQELSAK 763 (785)
Q Consensus 747 p~~Rp~m~~vv~~l~~~ 763 (785)
|.+||+|.||+++|.++
T Consensus 252 p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 252 PYERPSFAQILVSLNRM 268 (270)
T ss_pred hhhCCCHHHHHHHHHHh
Confidence 99999999999999875
No 76
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.27 E-value=2.1e-07 Score=95.03 Aligned_cols=87 Identities=17% Similarity=0.257 Sum_probs=53.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|..-.... .....+.+......... .....+.++...|++.+|++
T Consensus 182 Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~~p~~ 256 (269)
T cd08528 182 PEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML---SLATKIVEAVYEPLPEG--MYSEDVTDVITSCLTPDAEA 256 (269)
T ss_pred hhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH---HHHHHHhhccCCcCCcc--cCCHHHHHHHHHHCCCCCcc
Confidence 35555566789999999999999999999995311000 00001111111100000 00122445667899999999
Q ss_pred CCChHHHHHHHH
Q 003931 750 RPSMRFVAQELS 761 (785)
Q Consensus 750 Rp~m~~vv~~l~ 761 (785)
||+|.||++++.
T Consensus 257 Rp~~~e~~~~~~ 268 (269)
T cd08528 257 RPDIIQVSAMIS 268 (269)
T ss_pred CCCHHHHHHHhc
Confidence 999999999875
No 77
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.27 E-value=4.2e-07 Score=92.83 Aligned_cols=82 Identities=29% Similarity=0.502 Sum_probs=55.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+......+.++|||||||++.|++| |+.|.. ...++.. +...... .++...+.+++..|
T Consensus 180 PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~--------~~~~~~~----~~~~~~~~~li~~~ 247 (269)
T cd05065 180 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ--------DYRLPPP----MDCPTALHQLMLDC 247 (269)
T ss_pred HhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc--------CCcCCCc----ccCCHHHHHHHHHH
Confidence 355555677889999999999999987 998853 1111110 0011111 11123355778899
Q ss_pred CCCCCCCCCChHHHHHHHHhc
Q 003931 743 TSTTPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~~ 763 (785)
.+.+|++||+|.+|+++|+++
T Consensus 248 l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 248 WQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999998764
No 78
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.26 E-value=4.9e-07 Score=93.87 Aligned_cols=95 Identities=24% Similarity=0.214 Sum_probs=60.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||++.||+| |+.|..-... ....+.+.......... ..-..+.+++..|++.+|.
T Consensus 187 PE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~ 260 (297)
T cd05089 187 IESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC----AELYEKLPQGYRMEKPR--NCDDEVYELMRQCWRDRPY 260 (297)
T ss_pred chhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHhcCCCCCCCC--CCCHHHHHHHHHHcCCChh
Confidence 344445567889999999999999998 9888520000 00000111111000000 0112355778899999999
Q ss_pred CCCChHHHHHHHHhcccccCCC
Q 003931 749 TRPSMRFVAQELSAKTQAYLPE 770 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~~~~~~~~ 770 (785)
+||+|.+|+++|..+...+.+.
T Consensus 261 ~Rp~~~~i~~~l~~~~~~~~~~ 282 (297)
T cd05089 261 ERPPFAQISVQLSRMLEARKAY 282 (297)
T ss_pred hCcCHHHHHHHHHHHHHhhccc
Confidence 9999999999999887765444
No 79
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.26 E-value=4.8e-07 Score=92.30 Aligned_cols=92 Identities=17% Similarity=0.165 Sum_probs=56.8
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||+++|++||+.|...-.. ......+.+......+. .....-..+.++...|+..+|++
T Consensus 175 pE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~cl~~~p~~ 251 (267)
T cd08224 175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEKCDYPPL-PADHYSEELRDLVSRCINPDPEK 251 (267)
T ss_pred HHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc--cHHHHHhhhhcCCCCCC-ChhhcCHHHHHHHHHHcCCCccc
Confidence 3544555678899999999999999999999531100 00000000000000000 00011123556778899999999
Q ss_pred CCChHHHHHHHHhcc
Q 003931 750 RPSMRFVAQELSAKT 764 (785)
Q Consensus 750 Rp~m~~vv~~l~~~~ 764 (785)
||++.+|++++++++
T Consensus 252 Rp~~~~il~~~~~~~ 266 (267)
T cd08224 252 RPDISYVLQVAKEMH 266 (267)
T ss_pred CCCHHHHHHHHHHhc
Confidence 999999999998864
No 80
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.25 E-value=5.7e-07 Score=91.76 Aligned_cols=88 Identities=17% Similarity=0.127 Sum_probs=54.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhh--hccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELIT--SLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+......+.++|||||||++.|++||+.|...-. .........+...+.... .. .-..+..+...|++.+|+
T Consensus 176 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~li~~~l~~~p~ 250 (267)
T cd08229 176 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS--DH---YSEELRQLVNMCINPDPE 250 (267)
T ss_pred HHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCc--cc---ccHHHHHHHHHhcCCCcc
Confidence 44445567789999999999999999999952100 000000111111111111 01 112344566789999999
Q ss_pred CCCChHHHHHHHHhc
Q 003931 749 TRPSMRFVAQELSAK 763 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~ 763 (785)
+||+|.+|++++.+.
T Consensus 251 ~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 251 KRPDITYVYDVAKRM 265 (267)
T ss_pred cCCCHHHHHHHHhhh
Confidence 999999999998765
No 81
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.25 E-value=4.7e-07 Score=93.54 Aligned_cols=90 Identities=20% Similarity=0.318 Sum_probs=57.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++|||||||++.|++| |+.|..-... ......+........... .-..+.++...|++.+|.+
T Consensus 192 E~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~~~~i~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~ 265 (288)
T cd05093 192 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIECITQGRVLQRPRT---CPKEVYDLMLGCWQREPHM 265 (288)
T ss_pred HHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCcCCCCCC---CCHHHHHHHHHHccCChhh
Confidence 44445567889999999999999999 8888431100 000000000000000000 1123678899999999999
Q ss_pred CCChHHHHHHHHhcccc
Q 003931 750 RPSMRFVAQELSAKTQA 766 (785)
Q Consensus 750 Rp~m~~vv~~l~~~~~~ 766 (785)
||+|.||.+.|+++...
T Consensus 266 Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 266 RLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 99999999999988764
No 82
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.25 E-value=4e-07 Score=95.45 Aligned_cols=87 Identities=28% Similarity=0.453 Sum_probs=57.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.++|||||||++.|++| |+.|.+-.... ...+++.. ....+. .+...+.+++..|.+.+|
T Consensus 181 E~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p 252 (316)
T cd05108 181 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEKGERLPQPP----ICTIDVYMIMVKCWMIDA 252 (316)
T ss_pred HHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhCCCCCCCCC----CCCHHHHHHHHHHccCCh
Confidence 44445667899999999999999998 99986411000 00011111 111010 112345678889999999
Q ss_pred CCCCChHHHHHHHHhccc
Q 003931 748 DTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~~~ 765 (785)
++||+|.+|+..+.++..
T Consensus 253 ~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 253 DSRPKFRELIIEFSKMAR 270 (316)
T ss_pred hhCcCHHHHHHHHHHHHc
Confidence 999999999999987654
No 83
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.24 E-value=5.1e-07 Score=91.74 Aligned_cols=80 Identities=20% Similarity=0.311 Sum_probs=54.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+-.....+.++|||||||++.|++| |+.|.. ...++.. ........ . .-..+.++...|+
T Consensus 174 E~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~------~~~~~~~~---~---~~~~~~~li~~~l 241 (261)
T cd05072 174 EAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQR------GYRMPRME---N---CPDELYDIMKTCW 241 (261)
T ss_pred HHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHc------CCCCCCCC---C---CCHHHHHHHHHHc
Confidence 44445667889999999999999999 888842 1111111 00100000 1 1123567788999
Q ss_pred CCCCCCCCChHHHHHHHHh
Q 003931 744 STTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~ 762 (785)
..+|++||+|.++.++|++
T Consensus 242 ~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 242 KEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred cCCcccCcCHHHHHHHHhc
Confidence 9999999999999999875
No 84
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.24 E-value=4.7e-07 Score=91.74 Aligned_cols=85 Identities=25% Similarity=0.339 Sum_probs=54.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-....++.++|||||||++.|++| |+.|.+................+.... .....+.+++..|+..+|+
T Consensus 170 Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~ 243 (256)
T cd05059 170 PEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPK------LAPTEVYTIMYSCWHEKPE 243 (256)
T ss_pred HHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCC------CCCHHHHHHHHHHhcCChh
Confidence 355555677889999999999999999 787753111100000011111111111 0123466889999999999
Q ss_pred CCCChHHHHHHH
Q 003931 749 TRPSMRFVAQEL 760 (785)
Q Consensus 749 ~Rp~m~~vv~~l 760 (785)
+||+|.||+++|
T Consensus 244 ~Rpt~~~~l~~l 255 (256)
T cd05059 244 DRPAFKKLLSQL 255 (256)
T ss_pred hCcCHHHHHHHh
Confidence 999999999876
No 85
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.24 E-value=5.1e-07 Score=92.13 Aligned_cols=86 Identities=20% Similarity=0.210 Sum_probs=55.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc-----hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE-----LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~-----~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
|+-.+...+.++|||||||++.|++||+.|.. ...+.. .......+... ....-..+.++...|++.
T Consensus 176 E~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~ 247 (267)
T cd08228 176 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQ---KIEQCDYPPLP-----TEHYSEKLRELVSMCIYP 247 (267)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHH---HHhcCCCCCCC-----hhhcCHHHHHHHHHHCCC
Confidence 44444556789999999999999999999942 011100 00111111111 011112345667789999
Q ss_pred CCCCCCChHHHHHHHHhcc
Q 003931 746 TPDTRPSMRFVAQELSAKT 764 (785)
Q Consensus 746 ~p~~Rp~m~~vv~~l~~~~ 764 (785)
+|++||++.+|.+.+++++
T Consensus 248 ~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 248 DPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CcccCcCHHHHHHHHHHhc
Confidence 9999999999999998764
No 86
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.23 E-value=9.1e-07 Score=92.06 Aligned_cols=98 Identities=27% Similarity=0.346 Sum_probs=61.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc-hhh----hccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE-LIT----SLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~-~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
|.-..--+++|.|||||||||.||+||.-|.. +.. |-.... .+ .+..+. .|--...-+.-.|+..
T Consensus 281 EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN----sL--~LpvPs----tcP~GfklL~Kqcw~s 350 (904)
T KOG4721|consen 281 EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN----SL--HLPVPS----TCPDGFKLLLKQCWNS 350 (904)
T ss_pred HHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCC----cc--cccCcc----cCchHHHHHHHHHHhc
Confidence 55555678999999999999999999999953 111 111111 11 111111 1111112234579999
Q ss_pred CCCCCCChHHHHHHHHhcccccCCCCcchhhHH
Q 003931 746 TPDTRPSMRFVAQELSAKTQAYLPEPLDTMRIS 778 (785)
Q Consensus 746 ~p~~Rp~m~~vv~~l~~~~~~~~~~~~~~~~~~ 778 (785)
-|..||+++++..-|+=.+......+.+.++..
T Consensus 351 KpRNRPSFrqil~HldIa~pell~~tee~yf~s 383 (904)
T KOG4721|consen 351 KPRNRPSFRQILLHLDIASPELLSTTEETYFKS 383 (904)
T ss_pred CCCCCccHHHHHHHHhhcCHHHhcccHHHHHHH
Confidence 999999999999888755555555555544433
No 87
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.22 E-value=1.6e-07 Score=89.96 Aligned_cols=89 Identities=21% Similarity=0.250 Sum_probs=56.6
Q ss_pred CCCCccEEECCCCCCcccCC-hhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCccccc-CCcCCCCCCCC
Q 003931 75 TCRNLTYLDLSLNKLSGLIP-ERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGP-IPGDIGSMSNL 152 (785)
Q Consensus 75 ~l~~L~~L~Ls~n~i~~~~~-~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~-~~~~l~~l~~L 152 (785)
.++.++.+||.+|.|++.-. ..+..++|.|++|+|++|.+...+...-..+.+|+.|-|.+..+.-. ....+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 45677788888887763211 12446788888888888887743322224566788888877765432 22345677888
Q ss_pred CEEEcccCccc
Q 003931 153 QLVELFNNSFT 163 (785)
Q Consensus 153 ~~L~L~~n~~~ 163 (785)
+.|+++.|.+.
T Consensus 149 telHmS~N~~r 159 (418)
T KOG2982|consen 149 TELHMSDNSLR 159 (418)
T ss_pred hhhhhccchhh
Confidence 88888887543
No 88
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.22 E-value=6.9e-07 Score=90.49 Aligned_cols=79 Identities=27% Similarity=0.485 Sum_probs=54.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+......+.++|||||||++.|++| |+.|.+ +....... ....+++. . ...+.+++..|
T Consensus 170 Pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~-----~----~~~~~~l~~~~ 237 (256)
T cd05112 170 PEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG---FRLYKPRL-----A----SQSVYELMQHC 237 (256)
T ss_pred HhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC---CCCCCCCC-----C----CHHHHHHHHHH
Confidence 355555678889999999999999998 888853 11111100 01112221 1 12466789999
Q ss_pred CCCCCCCCCChHHHHHHH
Q 003931 743 TSTTPDTRPSMRFVAQEL 760 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l 760 (785)
++.+|++||+|.||+++|
T Consensus 238 l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 238 WKERPEDRPSFSLLLHQL 255 (256)
T ss_pred cccChhhCCCHHHHHHhh
Confidence 999999999999999876
No 89
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.21 E-value=5.9e-07 Score=91.57 Aligned_cols=87 Identities=26% Similarity=0.364 Sum_probs=54.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++||||||+++.|++| |+.|.. .+... .....+.+....... ..+-..+.+++..|++.+|++
T Consensus 178 e~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~--~~~~~-~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~ 251 (266)
T cd05033 178 EAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW--DMSNQ-DVIKAVEDGYRLPPP---MDCPSALYQLMLDCWQKDRNE 251 (266)
T ss_pred hhhccCCCccccchHHHHHHHHHHHccCCCCCC--CCCHH-HHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCCccc
Confidence 33344556789999999999999998 988852 11100 000011110000000 011123568889999999999
Q ss_pred CCChHHHHHHHHhc
Q 003931 750 RPSMRFVAQELSAK 763 (785)
Q Consensus 750 Rp~m~~vv~~l~~~ 763 (785)
||+|.||.++|+++
T Consensus 252 Rp~~~ei~~~l~~~ 265 (266)
T cd05033 252 RPTFSQIVSTLDKM 265 (266)
T ss_pred CcCHHHHHHHHHhh
Confidence 99999999999864
No 90
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.21 E-value=6.4e-07 Score=90.37 Aligned_cols=86 Identities=21% Similarity=0.282 Sum_probs=54.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-.+...+.++|||||||+++|++| |+.|.....-................. .....+.+++..|++.+|+
T Consensus 163 PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~ 236 (250)
T cd05085 163 PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQ------KCPDDVYKVMQRCWDYKPE 236 (250)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCC------CCCHHHHHHHHHHcccCcc
Confidence 455556678899999999999999999 888853110000000000000001100 1113456788999999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||+|.||+++|.
T Consensus 237 ~Rp~~~~l~~~l~ 249 (250)
T cd05085 237 NRPKFSELQKELA 249 (250)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999999874
No 91
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.21 E-value=5.2e-07 Score=91.40 Aligned_cols=85 Identities=20% Similarity=0.308 Sum_probs=51.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.+...+.|+|||||||++.|++||+.|.+...-............+.... ....-..+.++...|.+.+|++
T Consensus 168 PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~P~~ 243 (256)
T cd06612 168 PEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSD----PEKWSPEFNDFVKKCLVKDPEE 243 (256)
T ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCc----hhhcCHHHHHHHHHHHhcChhh
Confidence 355555678899999999999999999999964211100000000000011100 0000112456677899999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|.||++
T Consensus 244 Rps~~~il~ 252 (256)
T cd06612 244 RPSAIQLLQ 252 (256)
T ss_pred CcCHHHHhc
Confidence 999999864
No 92
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.21 E-value=8.5e-07 Score=93.39 Aligned_cols=83 Identities=19% Similarity=0.247 Sum_probs=56.5
Q ss_pred cccccccceeeeehhhhhhhhCCCCCch-----hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGEL-----ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~-----~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
.-.|..+||||||+|+.||+||..|..+ .-|....+ .+-|++... ...|-.+|-++...|+..+|++|
T Consensus 568 nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG----~l~pd~s~~---~s~~pk~mk~Ll~~C~~~~~~eR 640 (678)
T KOG0193|consen 568 NPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRG----YLMPDLSKI---RSNCPKAMKRLLSDCWKFDREER 640 (678)
T ss_pred CCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccc----ccCccchhh---hccCHHHHHHHHHHHHhcCcccC
Confidence 3457889999999999999999999641 11111111 111222111 12344456688899999999999
Q ss_pred CChHHHHHHHHhccc
Q 003931 751 PSMRFVAQELSAKTQ 765 (785)
Q Consensus 751 p~m~~vv~~l~~~~~ 765 (785)
|...++..+|+.+..
T Consensus 641 P~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 641 PLFPQLLSKLEELLP 655 (678)
T ss_pred ccHHHHHHHHHHhhh
Confidence 999999998877644
No 93
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.21 E-value=1.3e-06 Score=90.66 Aligned_cols=87 Identities=22% Similarity=0.281 Sum_probs=53.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh--CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhh
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM--GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALA 741 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt--gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~ 741 (785)
+|+....+.+.++|||||||++.|++| |..|.+ ...++...... .+...... .....-..+.+++..
T Consensus 201 PE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~l~~li~~ 275 (296)
T cd05051 201 WESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRD---DGRQIYLP--RPPNCPKDIYELMLE 275 (296)
T ss_pred HHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccc---ccccccCC--CccCCCHHHHHHHHH
Confidence 355455678899999999999999998 555543 11111100000 00000000 000011346788999
Q ss_pred cCCCCCCCCCChHHHHHHHH
Q 003931 742 CTSTTPDTRPSMRFVAQELS 761 (785)
Q Consensus 742 C~~~~p~~Rp~m~~vv~~l~ 761 (785)
|.+.+|++||+|.||++.|+
T Consensus 276 cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 276 CWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HhccChhcCCCHHHHHHHhc
Confidence 99999999999999999885
No 94
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.20 E-value=4.3e-07 Score=92.10 Aligned_cols=87 Identities=24% Similarity=0.313 Sum_probs=54.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++||||||++++||+| |+.|.+-............ .......+. ..-..+.++...|.+.+|+
T Consensus 169 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~li~~~l~~~p~ 243 (257)
T cd05040 169 PESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EGERLERPE----ACPQDIYNVMLQCWAHNPA 243 (257)
T ss_pred HHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCcCCCCc----cCCHHHHHHHHHHCCCCcc
Confidence 355555677889999999999999999 9999641111000000000 000110000 1113455778899999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||++.||++.|.
T Consensus 244 ~Rps~~~~~~~l~ 256 (257)
T cd05040 244 DRPTFAALREFLP 256 (257)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999998874
No 95
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.20 E-value=5.5e-07 Score=92.41 Aligned_cols=86 Identities=20% Similarity=0.230 Sum_probs=54.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+..+...+.++|||||||++.|++| |+.|.+-. ......+.+......... ...-..+.++...|++.+|+
T Consensus 190 PE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~cl~~~p~ 263 (277)
T cd05036 190 PEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR----TNQEVMEFVTGGGRLDPP--KGCPGPVYRIMTDCWQHTPE 263 (277)
T ss_pred HHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC----CHHHHHHHHHcCCcCCCC--CCCCHHHHHHHHHHcCCCcc
Confidence 466666778999999999999999997 88885310 000011111110000000 00112456778899999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||++.+|++.|+
T Consensus 264 ~Rps~~~vl~~l~ 276 (277)
T cd05036 264 DRPNFATILERIQ 276 (277)
T ss_pred cCcCHHHHHHHhh
Confidence 9999999998875
No 96
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.19 E-value=6.9e-07 Score=91.70 Aligned_cols=84 Identities=18% Similarity=0.268 Sum_probs=52.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|..-..-........+-..+.+.. .....+.++...|++.+|++
T Consensus 170 PE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~ 243 (277)
T cd06642 170 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEG------QYSKPFKEFVEACLNKDPRF 243 (277)
T ss_pred HHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCc------ccCHHHHHHHHHHccCCccc
Confidence 355555567889999999999999999999953100000000000011111111 11233557778899999999
Q ss_pred CCChHHHHHH
Q 003931 750 RPSMRFVAQE 759 (785)
Q Consensus 750 Rp~m~~vv~~ 759 (785)
||+|.||++.
T Consensus 244 Rp~~~~il~~ 253 (277)
T cd06642 244 RPTAKELLKH 253 (277)
T ss_pred CcCHHHHHHh
Confidence 9999999873
No 97
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.18 E-value=6.9e-07 Score=91.09 Aligned_cols=88 Identities=26% Similarity=0.305 Sum_probs=55.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-.....+.++|||||||++.|+++ |+.|..-... ......+.+...... ...+-..+.++...|++.+|+
T Consensus 177 PE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~li~~c~~~~p~ 250 (266)
T cd05064 177 PEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---QDVIKAVEDGFRLPA---PRNCPNLLHQLMLDCWQKERG 250 (266)
T ss_pred HHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHcCCCch
Confidence 354455678899999999999999875 9998531000 000000111000000 011123455778899999999
Q ss_pred CCCChHHHHHHHHhc
Q 003931 749 TRPSMRFVAQELSAK 763 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~ 763 (785)
+||+|.++.+.|.++
T Consensus 251 ~RP~~~~i~~~l~~~ 265 (266)
T cd05064 251 ERPRFSQIHSILSKM 265 (266)
T ss_pred hCCCHHHHHHHHHhh
Confidence 999999999988754
No 98
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.18 E-value=1e-06 Score=90.02 Aligned_cols=81 Identities=23% Similarity=0.435 Sum_probs=54.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+-..+..+.++|||||||++.|++| |+.|.. ...++... ...... ... -..+.++.-.|
T Consensus 182 PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~--------~~~~~~-~~~---~~~~~~li~~~ 249 (269)
T cd05044 182 PESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG--------GRLQKP-ENC---PDKIYQLMTNC 249 (269)
T ss_pred HHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC--------CccCCc-ccc---hHHHHHHHHHH
Confidence 355556678899999999999999998 888842 11111100 001000 011 12345778899
Q ss_pred CCCCCCCCCChHHHHHHHHh
Q 003931 743 TSTTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~ 762 (785)
...+|++||+|.+|.++|++
T Consensus 250 l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 250 WAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCCcccCCCHHHHHHHHhC
Confidence 99999999999999998863
No 99
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.17 E-value=7.8e-07 Score=95.46 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=53.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCC-CchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPP-TGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+......+.++|||||||++.|++| |+.|..-.. ......+.+....... .... -..+.++...|.+.+|+
T Consensus 286 E~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~cl~~dP~ 359 (375)
T cd05104 286 ESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP---VDSKFYKMIKEGYRMLSPECA---PSEMYDIMKSCWDADPL 359 (375)
T ss_pred hHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC---chHHHHHHHHhCccCCCCCCC---CHHHHHHHHHHccCChh
Confidence 44445567889999999999999998 777743100 0000000111100000 0000 12345778899999999
Q ss_pred CCCChHHHHHHHHh
Q 003931 749 TRPSMRFVAQELSA 762 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~ 762 (785)
+||+|.||+++|++
T Consensus 360 ~RPs~~eil~~l~~ 373 (375)
T cd05104 360 KRPTFKQIVQLIEQ 373 (375)
T ss_pred HCcCHHHHHHHHHh
Confidence 99999999999975
No 100
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.17 E-value=5.2e-07 Score=91.41 Aligned_cols=83 Identities=18% Similarity=0.260 Sum_probs=51.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.+...+.|+|||||||++.|++||+.|...... .....+++......... ..-..+..+...|++.+|.+
T Consensus 170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~ 243 (256)
T cd08218 170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---KNLVLKIIRGSYPPVSS---HYSYDLRNLVSQLFKRNPRD 243 (256)
T ss_pred HHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---HHHHHHHhcCCCCCCcc---cCCHHHHHHHHHHhhCChhh
Confidence 3554556778999999999999999999998531000 00000111111000000 01123456677899999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|.||++
T Consensus 244 Rp~~~~vl~ 252 (256)
T cd08218 244 RPSVNSILE 252 (256)
T ss_pred CcCHHHHhh
Confidence 999999975
No 101
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.17 E-value=1.3e-06 Score=90.98 Aligned_cols=91 Identities=23% Similarity=0.220 Sum_probs=56.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||++.|++| |+.|..-.............. ....+. . .-..+.++...|.+.+|+
T Consensus 192 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~-~---~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 192 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPL-N---CDDEVYDLMRQCWREKPY 265 (303)
T ss_pred HHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC--cCCCCC-C---CCHHHHHHHHHHcCCChh
Confidence 344455567899999999999999998 888853110000000000000 000000 0 112346778899999999
Q ss_pred CCCChHHHHHHHHhcccc
Q 003931 749 TRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~~~~ 766 (785)
+||+|.++++++.++...
T Consensus 266 ~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 266 ERPSFAQILVSLNRMLEE 283 (303)
T ss_pred hCcCHHHHHHHHHHHHHh
Confidence 999999999999876443
No 102
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.17 E-value=7.3e-07 Score=88.65 Aligned_cols=83 Identities=28% Similarity=0.364 Sum_probs=57.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|--+....+..+|||||||++.|++| ||.|.- ...+.+.. .++..+. .|--+++.|...|+
T Consensus 468 Eal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG--------yRlaQP~----NCPDeLf~vMacCW 535 (563)
T KOG1024|consen 468 EALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG--------YRLAQPF----NCPDELFTVMACCW 535 (563)
T ss_pred HHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc--------ceecCCC----CCcHHHHHHHHHHH
Confidence 44445567889999999999999998 888831 11121111 1222221 23345667788999
Q ss_pred CCCCCCCCChHHHHHHHHhccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~ 765 (785)
+..|++||+.+++|.-|.+-..
T Consensus 536 allpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 536 ALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred hcCcccCCCHHHHHHHHHHHHH
Confidence 9999999999999998876543
No 103
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.16 E-value=1.6e-06 Score=89.91 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=52.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCC--CCCchhhhccCcccccccccCCCCCC-CchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGR--HPGELITSLSGELFLKDVLDQRLPPP-TGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk--~p~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.++|||||||++.|++|++ .|.+....-.......+..+...... .......-..+.+++..|++.+|
T Consensus 201 E~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 280 (295)
T cd05097 201 ESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDI 280 (295)
T ss_pred hhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCc
Confidence 4444566789999999999999999954 44321000000000000000000000 00000011356788999999999
Q ss_pred CCCCChHHHHHHHHh
Q 003931 748 DTRPSMRFVAQELSA 762 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~ 762 (785)
++||+|.+|++.|++
T Consensus 281 ~~RPs~~~i~~~l~~ 295 (295)
T cd05097 281 KDRPTFNKIHHFLRE 295 (295)
T ss_pred hhCcCHHHHHHHHhC
Confidence 999999999998863
No 104
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.16 E-value=7.6e-07 Score=92.79 Aligned_cols=86 Identities=24% Similarity=0.385 Sum_probs=55.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc---hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE---LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
|+......+.++|||||||+++|++| |+.|.. ....+.. ..+ +.....+ ..+...+.++...|++.+
T Consensus 209 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~--~~~~~~~----~~~~~~~~~li~~cl~~~ 279 (304)
T cd05101 209 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKE--GHRMDKP----ANCTNELYMMMRDCWHAI 279 (304)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH---HHc--CCcCCCC----CCCCHHHHHHHHHHcccC
Confidence 44445567889999999999999999 676643 1111100 000 0000000 011233556788999999
Q ss_pred CCCCCChHHHHHHHHhccc
Q 003931 747 PDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 747 p~~Rp~m~~vv~~l~~~~~ 765 (785)
|++||+|.||++.|+++..
T Consensus 280 p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 280 PSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred hhhCCCHHHHHHHHHHHHH
Confidence 9999999999999988754
No 105
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.15 E-value=5.5e-06 Score=73.76 Aligned_cols=124 Identities=16% Similarity=0.210 Sum_probs=54.1
Q ss_pred cccccCCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCC
Q 003931 22 PFQLSSLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNL 101 (785)
Q Consensus 22 ~~~~~~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l 101 (785)
..+|.++.+|+.+.+.. .+..+...+|.++++|+.+.+..+ +..+....|..+++++.+.+.. .+. .++...|..+
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~-~i~~~~F~~~ 80 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK-SIGDNAFSNC 80 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT--EE-TTTTTT-
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccc-cccccccccc
Confidence 34556666666666653 455566666666666666666553 5555555666666666666654 333 3455556666
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCCCCCCCC
Q 003931 102 GKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNL 152 (785)
Q Consensus 102 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 152 (785)
++|+.+++..+ +.......|.++ +|+.+.+.. .+.......|.++++|
T Consensus 81 ~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 81 TNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66666666544 444445556665 666666654 3333444455555554
No 106
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.15 E-value=1.2e-06 Score=93.81 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=55.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCC-CchhHHHHHHHHHHHhhcCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPP-TGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~ial~C~~~~p 747 (785)
+|+-.....+.|+|||||||++.|++| |+.|..-... . ......+....... .... -..+.++...|.+.+|
T Consensus 283 PE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~--~-~~~~~~~~~~~~~~~~~~~---~~~l~~li~~cl~~dp 356 (374)
T cd05106 283 PESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV--N-SKFYKMVKRGYQMSRPDFA---PPEIYSIMKMCWNLEP 356 (374)
T ss_pred HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc--c-HHHHHHHHcccCccCCCCC---CHHHHHHHHHHcCCCh
Confidence 344445667899999999999999998 9998531100 0 00001111100000 0000 1234566778999999
Q ss_pred CCCCChHHHHHHHHhc
Q 003931 748 DTRPSMRFVAQELSAK 763 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~ 763 (785)
++||+|.+|+++|+++
T Consensus 357 ~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 357 TERPTFSQISQLIQRQ 372 (374)
T ss_pred hhCcCHHHHHHHHHHH
Confidence 9999999999999875
No 107
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.15 E-value=5.3e-07 Score=93.18 Aligned_cols=87 Identities=25% Similarity=0.304 Sum_probs=55.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.|+|||||||+++|++| |..|..-.. .+.....+.+........ .....+.++...|.+.+|+
T Consensus 201 PE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~ 274 (288)
T cd05050 201 PESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA---HEEVIYYVRDGNVLSCPD---NCPLELYNLMRLCWSKLPS 274 (288)
T ss_pred HHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcccCcc
Confidence 355555678899999999999999998 877742000 000011111111111000 1123456788999999999
Q ss_pred CCCChHHHHHHHHh
Q 003931 749 TRPSMRFVAQELSA 762 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~ 762 (785)
+||+|.||++.|++
T Consensus 275 ~Rpt~~el~~~l~~ 288 (288)
T cd05050 275 DRPSFASINRILQR 288 (288)
T ss_pred cCCCHHHHHHHhhC
Confidence 99999999999863
No 108
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.15 E-value=8.5e-07 Score=92.03 Aligned_cols=88 Identities=24% Similarity=0.337 Sum_probs=53.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhh--CCCCCc---hhhhccC-cccccccccC-CCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM--GRHPGE---LITSLSG-ELFLKDVLDQ-RLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt--gk~p~~---~~~~~~~-~~~~~~~~d~-~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++|||||||++.|++| |+.|.. ..+.+.. .......... ....+. .+...+.++...|.
T Consensus 202 e~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl 277 (296)
T cd05095 202 ESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPA----LCPDSLYKLMLSCW 277 (296)
T ss_pred HHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCC----CCCHHHHHHHHHHc
Confidence 44445667889999999999999999 555532 0111100 0000000000 000000 11234568889999
Q ss_pred CCCCCCCCChHHHHHHHHh
Q 003931 744 STTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~ 762 (785)
+.+|++||+|.||++.|++
T Consensus 278 ~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 278 RRNAKERPSFQEIHATLLE 296 (296)
T ss_pred CCCcccCCCHHHHHHHHhC
Confidence 9999999999999998863
No 109
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.15 E-value=9.5e-07 Score=90.80 Aligned_cols=85 Identities=25% Similarity=0.362 Sum_probs=57.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|.......+.++||||||+++.|++| |+.|.+ +..++...... .. +. .....+.++...|.
T Consensus 181 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------~~--~~----~~~~~~~~li~~~l 248 (279)
T cd05109 181 ESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL------PQ--PP----ICTIDVYMIMVKCW 248 (279)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC------CC--Cc----cCCHHHHHHHHHHc
Confidence 44445567899999999999999999 888853 11111110000 00 00 11223557788999
Q ss_pred CCCCCCCCChHHHHHHHHhccccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQAY 767 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~~~ 767 (785)
+.+|++||++.|+.+.+.++....
T Consensus 249 ~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 249 MIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCChhhCcCHHHHHHHHHHhhcCC
Confidence 999999999999999998876543
No 110
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.15 E-value=1.6e-06 Score=91.92 Aligned_cols=88 Identities=26% Similarity=0.386 Sum_probs=59.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|.-.++..|.|+|||||||++-|+++ |..|.. ...++...+ .++..+. ....++.. +.-.|
T Consensus 331 PEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~-------~r~~~~~-~~p~~~~~---~~~~c 399 (474)
T KOG0194|consen 331 PETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNG-------YRMPIPS-KTPKELAK---VMKQC 399 (474)
T ss_pred hhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcC-------ccCCCCC-CCHHHHHH---HHHHh
Confidence 466667788999999999999999999 888854 223331111 1111111 12233333 34489
Q ss_pred CCCCCCCCCChHHHHHHHHhcccccC
Q 003931 743 TSTTPDTRPSMRFVAQELSAKTQAYL 768 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~~~~~~~ 768 (785)
+..+|++||+|.+|++.++.+.....
T Consensus 400 ~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 400 WKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ccCChhhccCHHHHHHHHHHHHhccc
Confidence 99999999999999999988766543
No 111
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.14 E-value=8.6e-07 Score=91.31 Aligned_cols=86 Identities=21% Similarity=0.342 Sum_probs=54.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|.......+.++||||||++++|++| |..|..-. ........+.+........ .+-..+..+...|++.+|+
T Consensus 195 PE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~---~~~~~~~~i~~~~~~~~~~---~~~~~~~~li~~cl~~~p~ 268 (283)
T cd05091 195 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY---SNQDVIEMIRNRQVLPCPD---DCPAWVYTLMLECWNEFPS 268 (283)
T ss_pred HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHhCCCcc
Confidence 354455667889999999999999999 77674200 0000111111211111000 1112355788999999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||+|.+|++.|+
T Consensus 269 ~RP~~~~i~~~l~ 281 (283)
T cd05091 269 RRPRFKDIHSRLR 281 (283)
T ss_pred cCCCHHHHHHHhh
Confidence 9999999999885
No 112
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.14 E-value=8.5e-07 Score=90.76 Aligned_cols=81 Identities=28% Similarity=0.372 Sum_probs=53.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++||||||++++|++| |+.|.. +...+.... ...... . ....+.+++..|+
T Consensus 184 e~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~-~---~~~~~~~li~~~l 251 (272)
T cd05075 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN--------RLKQPP-D---CLDGLYSLMSSCW 251 (272)
T ss_pred HHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--------CCCCCC-C---CCHHHHHHHHHHc
Confidence 44444567889999999999999999 677743 111111100 000000 1 1123457788999
Q ss_pred CCCCCCCCChHHHHHHHHhc
Q 003931 744 STTPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~ 763 (785)
+.+|++||+|.|+.+.|+++
T Consensus 252 ~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 252 LLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCcccCcCHHHHHHHHHhh
Confidence 99999999999999998764
No 113
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.13 E-value=1.4e-06 Score=88.35 Aligned_cols=82 Identities=23% Similarity=0.374 Sum_probs=55.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+.....++.++||||||+++.|++| |+.|.. +..++... .. +.... .+-..+.++...|
T Consensus 168 PE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~-----~~~~~------~~~~~~~~li~~~ 235 (256)
T cd05082 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YK-----MDAPD------GCPPVVYDVMKQC 235 (256)
T ss_pred HHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CC-----CCCCC------CCCHHHHHHHHHH
Confidence 355555667889999999999999998 888743 11111110 00 01100 0112345678899
Q ss_pred CCCCCCCCCChHHHHHHHHhc
Q 003931 743 TSTTPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~~ 763 (785)
.+.+|++||+|.+++++|+++
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999998764
No 114
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.13 E-value=1e-06 Score=90.17 Aligned_cols=78 Identities=27% Similarity=0.431 Sum_probs=53.3
Q ss_pred hhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
.....+.++||||||+++.|++| |+.|.. +..+..... .+.... .....+.+++..|.+.+
T Consensus 188 ~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~----~~~~~~~~l~~~~l~~~ 255 (273)
T cd05074 188 ADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN--------RLKQPP----DCLEDVYELMCQCWSPE 255 (273)
T ss_pred hcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC--------cCCCCC----CCCHHHHHHHHHHcCCC
Confidence 34456789999999999999999 777742 111111100 010000 11234667889999999
Q ss_pred CCCCCChHHHHHHHHhc
Q 003931 747 PDTRPSMRFVAQELSAK 763 (785)
Q Consensus 747 p~~Rp~m~~vv~~l~~~ 763 (785)
|++||++.+|.+.|+++
T Consensus 256 p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 256 PKCRPSFQHLRDQLELI 272 (273)
T ss_pred hhhCcCHHHHHHHHHhh
Confidence 99999999999999876
No 115
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.13 E-value=9.8e-07 Score=89.66 Aligned_cols=88 Identities=24% Similarity=0.379 Sum_probs=55.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|.......+.++|||||||++.|++| |+.|..-.. ...... .+......+.. ..+...+.+++..|...+|+
T Consensus 173 PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~---~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~ 246 (261)
T cd05148 173 PEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN---NHEVYD-QITAGYRMPCP--AKCPQEIYKIMLECWAAEPE 246 (261)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC---HHHHHH-HHHhCCcCCCC--CCCCHHHHHHHHHHcCCCch
Confidence 344445567889999999999999999 788853100 000000 00011000000 01112355778899999999
Q ss_pred CCCChHHHHHHHHhc
Q 003931 749 TRPSMRFVAQELSAK 763 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~ 763 (785)
+||+|+++.++|+.+
T Consensus 247 ~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 247 DRPSFKALREELDNI 261 (261)
T ss_pred hCcCHHHHHHHHhcC
Confidence 999999999999753
No 116
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.13 E-value=1.2e-06 Score=88.69 Aligned_cols=83 Identities=20% Similarity=0.305 Sum_probs=52.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|.+-.... .....+.......... ..-..+.++...|++.+|++
T Consensus 170 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~ 243 (256)
T cd08529 170 PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALILKIIRGVFPPVSQ---MYSQQLAQLIDQCLTKDYRQ 243 (256)
T ss_pred HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCCCCcc---ccCHHHHHHHHHHccCCccc
Confidence 45555666788999999999999999999996411100 0000000000000000 11123567788999999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|.++++
T Consensus 244 Rp~~~~ll~ 252 (256)
T cd08529 244 RPDTFQLLR 252 (256)
T ss_pred CcCHHHHhh
Confidence 999999875
No 117
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.12 E-value=9.1e-07 Score=89.66 Aligned_cols=80 Identities=23% Similarity=0.310 Sum_probs=52.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|.......+.++|||||||++.|++| |+.|.+ +...+.... . +..... .. ..+.++...|.
T Consensus 168 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~----~--~~~~~~--~~----~~l~~li~~~~ 235 (257)
T cd05116 168 ECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE----R--MECPQR--CP----PEMYDLMKLCW 235 (257)
T ss_pred hHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC----C--CCCCCC--CC----HHHHHHHHHHh
Confidence 33334456789999999999999998 998854 111111100 0 011110 11 12346778899
Q ss_pred CCCCCCCCChHHHHHHHHh
Q 003931 744 STTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~ 762 (785)
+.+|++||+|.+|+++|+.
T Consensus 236 ~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 236 TYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ccCchhCcCHHHHHHHHhc
Confidence 9999999999999999864
No 118
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.11 E-value=1.1e-06 Score=90.25 Aligned_cols=79 Identities=25% Similarity=0.428 Sum_probs=53.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+-.....+.++|||||||++.|++| |+.|.. .+..... ........ ..-..+.++...|+
T Consensus 194 E~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~li~~~l 261 (280)
T cd05049 194 ESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ---------GRLLQRPR---TCPSEVYDIMLGCW 261 (280)
T ss_pred hhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---------CCcCCCCC---CCCHHHHHHHHHHc
Confidence 44445667889999999999999999 999852 1111110 01100000 01123567788999
Q ss_pred CCCCCCCCChHHHHHHHH
Q 003931 744 STTPDTRPSMRFVAQELS 761 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~ 761 (785)
+.+|++||++.||.++|+
T Consensus 262 ~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 262 KRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCcccCCCHHHHHHHhh
Confidence 999999999999999885
No 119
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.11 E-value=1.1e-06 Score=91.76 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=55.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++|||||||++.|++| |+.|.+-... ....+.+....... ........+.++...|...+|++
T Consensus 212 E~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~ 285 (307)
T cd05098 212 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----EELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAVPSQ 285 (307)
T ss_pred HHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH----HHHHHHHHcCCCCC--CCCcCCHHHHHHHHHHcccChhh
Confidence 44444557889999999999999999 7777431000 00000000000000 00011123456788999999999
Q ss_pred CCChHHHHHHHHhcccc
Q 003931 750 RPSMRFVAQELSAKTQA 766 (785)
Q Consensus 750 Rp~m~~vv~~l~~~~~~ 766 (785)
||+|.||++.|+++.+.
T Consensus 286 Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 286 RPTFKQLVEDLDRILAL 302 (307)
T ss_pred CcCHHHHHHHHHHHHHH
Confidence 99999999999987554
No 120
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.11 E-value=1.2e-06 Score=88.89 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=54.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+-....++.++|||||||++.|+++ |+.|.. +...+..... +.... . +-.++.++...|.
T Consensus 168 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~---~---~~~~l~~li~~c~ 235 (257)
T cd05115 168 ECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR------LDCPA---E---CPPEMYALMKDCW 235 (257)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC------CCCCC---C---CCHHHHHHHHHHc
Confidence 44444567889999999999999997 999853 1111111100 00100 1 1123456788999
Q ss_pred CCCCCCCCChHHHHHHHHhc
Q 003931 744 STTPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~ 763 (785)
..+|++||+|.+|.+.|+.+
T Consensus 236 ~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 236 IYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCChhhCcCHHHHHHHHhhh
Confidence 99999999999999998764
No 121
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.11 E-value=7.3e-07 Score=92.92 Aligned_cols=85 Identities=25% Similarity=0.273 Sum_probs=52.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCC--CCCc------hhhhccC--cccccccccCCCCCCCchhHHHHHHHHHHHh
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGR--HPGE------LITSLSG--ELFLKDVLDQRLPPPTGQLAEAVVLTINVAL 740 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk--~p~~------~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial 740 (785)
|+......+.|+||||||+++.|++|+. .|.. ...++.. ......+. ...+. .+-..+.++..
T Consensus 210 E~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~li~ 282 (304)
T cd05096 210 ECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVY---LFRPP----PCPQGLYELML 282 (304)
T ss_pred HHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcccccc---ccCCC----CCCHHHHHHHH
Confidence 5444566789999999999999999854 4432 1111100 00000000 00000 11124567889
Q ss_pred hcCCCCCCCCCChHHHHHHHHh
Q 003931 741 ACTSTTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 741 ~C~~~~p~~Rp~m~~vv~~l~~ 762 (785)
.|.+.+|++||+|.+|++.|++
T Consensus 283 ~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 283 QCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred HHccCCchhCcCHHHHHHHHhC
Confidence 9999999999999999998853
No 122
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.11 E-value=1.2e-06 Score=88.60 Aligned_cols=85 Identities=20% Similarity=0.303 Sum_probs=53.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||++.|++| |+.|.+.... ......+.+......... .-..+.++...|.+.+|+
T Consensus 170 pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~ 243 (256)
T cd05113 170 PEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVEKVSQGLRLYRPHL---ASEKVYAIMYSCWHEKAE 243 (256)
T ss_pred HHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHcCCCcc
Confidence 355555667889999999999999999 9988531110 000000000000000000 113456778899999999
Q ss_pred CCCChHHHHHHH
Q 003931 749 TRPSMRFVAQEL 760 (785)
Q Consensus 749 ~Rp~m~~vv~~l 760 (785)
+||++.++++.+
T Consensus 244 ~Rp~~~~ll~~~ 255 (256)
T cd05113 244 ERPTFQQLLSSI 255 (256)
T ss_pred cCCCHHHHHHhh
Confidence 999999998876
No 123
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.11 E-value=5.1e-06 Score=73.96 Aligned_cols=124 Identities=15% Similarity=0.214 Sum_probs=46.3
Q ss_pred ccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCC
Q 003931 46 WSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKL 125 (785)
Q Consensus 46 ~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l 125 (785)
..+|.++.+|+.+.+.. .+..+....|.++++|+.+.+..+ +. .++...|.+++.++.+.+.. .+.......|..+
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~-~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~ 80 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LT-SIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNC 80 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TS-CE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-cc-ccceeeeecccccccccccc-ccccccccccccc
Confidence 34555555555555543 344444555555555555555553 33 34455555555555555543 3333344455555
Q ss_pred CCCcEEEcCCCcccccCCcCCCCCCCCCEEEcccCcccccCCccccCCCCC
Q 003931 126 SNLIDLRLATNKFSGPIPGDIGSMSNLQLVELFNNSFTGQIPSSLGQLKNL 176 (785)
Q Consensus 126 ~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 176 (785)
++|+.+++..+ +.......|.++ +|+.+.+.. .+.......|.++++|
T Consensus 81 ~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 81 TNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 55555555443 333333445554 555555543 2222333444444443
No 124
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.10 E-value=9.4e-07 Score=90.54 Aligned_cols=84 Identities=18% Similarity=0.274 Sum_probs=51.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||+++|++||+.|.+-..-.........-..+.+... . .-..+.++...|...+|++
T Consensus 167 PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~l~~~p~~ 241 (274)
T cd06609 167 PEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGN--K---FSKPFKDFVSLCLNKDPKE 241 (274)
T ss_pred hhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCccc--c---cCHHHHHHHHHHhhCChhh
Confidence 4555566688999999999999999999999641110000000000011111110 0 0112445677899999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|++|++
T Consensus 242 Rpt~~~il~ 250 (274)
T cd06609 242 RPSAKELLK 250 (274)
T ss_pred CcCHHHHhh
Confidence 999999966
No 125
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.10 E-value=1.7e-06 Score=87.78 Aligned_cols=87 Identities=24% Similarity=0.399 Sum_probs=55.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+....+.+.++|||||||++.|++| |+.|..-.. .....+.++.....+.. ...-..+.++...|...+|+
T Consensus 172 PE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05070 172 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN----NREVLEQVERGYRMPCP--QDCPISLHELMLQCWKKDPE 245 (260)
T ss_pred hHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC----HHHHHHHHHcCCCCCCC--CcCCHHHHHHHHHHcccCcc
Confidence 355555678899999999999999999 787752100 00000111111000000 01123466788999999999
Q ss_pred CCCChHHHHHHHHh
Q 003931 749 TRPSMRFVAQELSA 762 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~ 762 (785)
+||+|.++.+.|++
T Consensus 246 ~Rpt~~~l~~~l~~ 259 (260)
T cd05070 246 ERPTFEYLQSFLED 259 (260)
T ss_pred cCcCHHHHHHHHhc
Confidence 99999999998865
No 126
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.10 E-value=1.3e-06 Score=94.10 Aligned_cols=87 Identities=20% Similarity=0.353 Sum_probs=55.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.|+|||||||++.|++| |+.|..-.. ... ...+.+.. ....+ ...-..+.+++..|.+.+|
T Consensus 309 E~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~--~~~-~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP 381 (400)
T cd05105 309 ESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI--VDS-TFYNKIKSGYRMAKP----DHATQEVYDIMVKCWNSEP 381 (400)
T ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc--hhH-HHHHHHhcCCCCCCC----ccCCHHHHHHHHHHCccCH
Confidence 44445567889999999999999997 888853100 000 00000000 01000 0112345678899999999
Q ss_pred CCCCChHHHHHHHHhcc
Q 003931 748 DTRPSMRFVAQELSAKT 764 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~~ 764 (785)
++||+|.+|+++|+++-
T Consensus 382 ~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 382 EKRPSFLHLSDIVESLL 398 (400)
T ss_pred hHCcCHHHHHHHHHHHc
Confidence 99999999999998753
No 127
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.09 E-value=1.1e-06 Score=89.65 Aligned_cols=81 Identities=19% Similarity=0.261 Sum_probs=47.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC-cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++|||||||++.|++||+.|..-...... ........++.+.. .+...++-.+.|...+|++
T Consensus 179 E~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~~~~~p~~ 251 (266)
T cd06651 179 EVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPS-------HISEHARDFLGCIFVEARH 251 (266)
T ss_pred HHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCch-------hcCHHHHHHHHHhcCChhh
Confidence 444455678899999999999999999999531100000 00000111222211 1111223334688889999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|+||++
T Consensus 252 Rp~~~eil~ 260 (266)
T cd06651 252 RPSAEELLR 260 (266)
T ss_pred CcCHHHHhc
Confidence 999999853
No 128
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.09 E-value=1.5e-06 Score=89.38 Aligned_cols=86 Identities=19% Similarity=0.290 Sum_probs=52.8
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||+++|++| |+.|..-.. .......+........... .-..+.++...|++.+|+
T Consensus 193 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 193 PESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS---NTEAIECITQGRELERPRT---CPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred HHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC---HHHHHHHHHcCccCCCCCC---CCHHHHHHHHHHccCChh
Confidence 344455667899999999999999999 888742000 0000000111000000000 112245677899999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||++.||.+.|+
T Consensus 267 ~Rp~~~~l~~~l~ 279 (280)
T cd05092 267 QRMVIKDIHSRLQ 279 (280)
T ss_pred hCCCHHHHHHHHh
Confidence 9999999999885
No 129
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.09 E-value=1.4e-06 Score=88.92 Aligned_cols=87 Identities=25% Similarity=0.418 Sum_probs=55.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC-CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ-RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
+|+......+.++||||||+++.|+++ |+.|..-... ......+.+. ...... .....+.+++..|.+.+|
T Consensus 178 pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p 250 (267)
T cd05066 178 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVIKAIEEGYRLPAPM----DCPAALHQLMLDCWQKDR 250 (267)
T ss_pred HhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---HHHHHHHhCCCcCCCCC----CCCHHHHHHHHHHcccCc
Confidence 355555677889999999999999887 9998531000 0000000110 010000 111234577889999999
Q ss_pred CCCCChHHHHHHHHhc
Q 003931 748 DTRPSMRFVAQELSAK 763 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~ 763 (785)
++||+|.+|++.|+++
T Consensus 251 ~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 251 NERPKFEQIVSILDKL 266 (267)
T ss_pred hhCCCHHHHHHHHHhh
Confidence 9999999999999874
No 130
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.09 E-value=1.3e-06 Score=88.28 Aligned_cols=85 Identities=25% Similarity=0.336 Sum_probs=53.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++|||||||++.|+++ |+.|.+-... ....+.++....... ....-..+.++...|.+.+|++
T Consensus 166 E~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~ 239 (252)
T cd05084 166 EALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN----QQTREAIEQGVRLPC--PELCPDAVYRLMERCWEYDPGQ 239 (252)
T ss_pred hhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH----HHHHHHHHcCCCCCC--cccCCHHHHHHHHHHcCCChhh
Confidence 44445567889999999999999998 7777531110 000111111110000 0011124567788999999999
Q ss_pred CCChHHHHHHHH
Q 003931 750 RPSMRFVAQELS 761 (785)
Q Consensus 750 Rp~m~~vv~~l~ 761 (785)
||+|.+|.++|+
T Consensus 240 Rps~~~~~~~l~ 251 (252)
T cd05084 240 RPSFSTVHQELQ 251 (252)
T ss_pred CcCHHHHHHHHh
Confidence 999999999886
No 131
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.09 E-value=1.2e-06 Score=90.36 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=55.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchh-----hhcc---Ccccc---cccccCCCCCCCchhHHHHHHHHHHH
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELI-----TSLS---GELFL---KDVLDQRLPPPTGQLAEAVVLTINVA 739 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~-----~~~~---~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~ia 739 (785)
|+......+.++|||||||+++|++||+.|.... +.+. .+... .+.+......+ ........+.+++
T Consensus 182 E~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li 259 (284)
T cd05079 182 ECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP--RPPNCPEEVYQLM 259 (284)
T ss_pred HHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCC--CCCCCCHHHHHHH
Confidence 4444456788999999999999999988764210 0000 00000 00000000000 0001223567889
Q ss_pred hhcCCCCCCCCCChHHHHHHHHhc
Q 003931 740 LACTSTTPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 740 l~C~~~~p~~Rp~m~~vv~~l~~~ 763 (785)
..|.+.+|++||++.||++.++++
T Consensus 260 ~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 260 RKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHccCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999875
No 132
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.09 E-value=1.8e-06 Score=88.61 Aligned_cols=84 Identities=20% Similarity=0.332 Sum_probs=53.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|....... ...+.+....... ........+.++...|++.+|++
T Consensus 170 pE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~ 243 (277)
T cd06640 170 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM----RVLFLIPKNNPPT--LTGEFSKPFKEFIDACLNKDPSF 243 (277)
T ss_pred HhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH----hHhhhhhcCCCCC--CchhhhHHHHHHHHHHcccCccc
Confidence 45555566789999999999999999999985311100 0001111110000 11122344667888999999999
Q ss_pred CCChHHHHHH
Q 003931 750 RPSMRFVAQE 759 (785)
Q Consensus 750 Rp~m~~vv~~ 759 (785)
||+|.||++.
T Consensus 244 Rp~~~~il~~ 253 (277)
T cd06640 244 RPTAKELLKH 253 (277)
T ss_pred CcCHHHHHhC
Confidence 9999999653
No 133
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.08 E-value=1.7e-06 Score=87.83 Aligned_cols=81 Identities=26% Similarity=0.408 Sum_probs=53.8
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+......+.++|||||||++.|++| |+.|.. ...+.... ..+.... .....+.++.-.|
T Consensus 172 Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~------~~~~~~~------~~~~~~~~li~~~ 239 (260)
T cd05069 172 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG------YRMPCPQ------GCPESLHELMKLC 239 (260)
T ss_pred HHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC------CCCCCCc------ccCHHHHHHHHHH
Confidence 355555678899999999999999999 887742 11111100 0000000 1112345667789
Q ss_pred CCCCCCCCCChHHHHHHHHh
Q 003931 743 TSTTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~ 762 (785)
.+.+|++||+|.+|.+.|++
T Consensus 240 l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 240 WKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999875
No 134
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.07 E-value=1.8e-06 Score=88.77 Aligned_cols=89 Identities=24% Similarity=0.300 Sum_probs=56.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++|||||||++.|++| |+.|.+-... +.....+......... . .+-..+..+...|...+|.+
T Consensus 181 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~p~~ 254 (279)
T cd05057 181 ESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA---VEIPDLLEKGERLPQP-P--ICTIDVYMVLVKCWMIDAES 254 (279)
T ss_pred HHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHhCCCCCCCC-C--CCCHHHHHHHHHHcCCChhh
Confidence 44445567889999999999999999 9999641100 0000000000000000 0 01133557788999999999
Q ss_pred CCChHHHHHHHHhccc
Q 003931 750 RPSMRFVAQELSAKTQ 765 (785)
Q Consensus 750 Rp~m~~vv~~l~~~~~ 765 (785)
||++.++++.|.++..
T Consensus 255 Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 255 RPTFKELINEFSKMAR 270 (279)
T ss_pred CCCHHHHHHHHHHHHh
Confidence 9999999999988754
No 135
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.05 E-value=1.7e-06 Score=88.73 Aligned_cols=86 Identities=26% Similarity=0.288 Sum_probs=54.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|.......+.++|||||||++.|++| |+.|..-.. .......+.+......... +-..+.+++..|...+|+
T Consensus 190 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~ 263 (277)
T cd05032 190 PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS---NEEVLKFVIDGGHLDLPEN---CPDKLLELMRMCWQYNPK 263 (277)
T ss_pred HHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC---HHHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHcCCChh
Confidence 344455678899999999999999999 887742100 0000000111111000001 123456788999999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||++.++.++|+
T Consensus 264 ~Rpt~~~l~~~l~ 276 (277)
T cd05032 264 MRPTFLEIVSSLK 276 (277)
T ss_pred hCCCHHHHHHHhc
Confidence 9999999999875
No 136
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.05 E-value=2.2e-06 Score=89.71 Aligned_cols=84 Identities=21% Similarity=0.306 Sum_probs=56.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCch------hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGEL------ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~------~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+-.....+.++|||||||++.|++| |+.|..- ....... .. +.. + .. +...+.+++..|.
T Consensus 206 E~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~-----~~~--~-~~---~~~~l~~li~~cl 273 (314)
T cd05099 206 EALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG-HR-----MDK--P-SN---CTHELYMLMRECW 273 (314)
T ss_pred HHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CC-----CCC--C-CC---CCHHHHHHHHHHc
Confidence 44445567899999999999999999 8877431 1111100 00 001 0 01 1123446788999
Q ss_pred CCCCCCCCChHHHHHHHHhcccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~~ 766 (785)
..+|++||+|.||.+.|.++...
T Consensus 274 ~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 274 HAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred CCCcccCcCHHHHHHHHHHHHHH
Confidence 99999999999999999988654
No 137
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.04 E-value=1.4e-06 Score=89.83 Aligned_cols=85 Identities=20% Similarity=0.333 Sum_probs=53.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCC-CCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLP-PPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+-.....+.++|||||||++.|++| |+.|..-.. .....+.++.... ..... .-..+.++...|++.+|+
T Consensus 196 E~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~ 268 (283)
T cd05090 196 EAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS----NQEVIEMVRKRQLLPCSED---CPPRMYSLMTECWQEGPS 268 (283)
T ss_pred HHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHHcCCcCCCCCC---CCHHHHHHHHHHcccCcc
Confidence 44445567899999999999999999 887742100 0011111111110 00001 112344567789999999
Q ss_pred CCCChHHHHHHHHh
Q 003931 749 TRPSMRFVAQELSA 762 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~ 762 (785)
+||+|.+|.++|..
T Consensus 269 ~Rp~~~~i~~~l~~ 282 (283)
T cd05090 269 RRPRFKDIHTRLRS 282 (283)
T ss_pred cCcCHHHHHHHhhc
Confidence 99999999988853
No 138
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.04 E-value=1.9e-06 Score=87.62 Aligned_cols=87 Identities=25% Similarity=0.362 Sum_probs=55.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+.....++.++||||||+++.|++| |+.|.+-.. .. ...+.++...... ...+....+.++...|++.+|+
T Consensus 172 PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~---~~-~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~ 245 (262)
T cd05071 172 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV---NR-EVLDQVERGYRMP--CPPECPESLHDLMCQCWRKEPE 245 (262)
T ss_pred HhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---hH-HHHHHHhcCCCCC--CccccCHHHHHHHHHHccCCcc
Confidence 355555678899999999999999999 666642000 00 0000000000000 0011223456889999999999
Q ss_pred CCCChHHHHHHHHh
Q 003931 749 TRPSMRFVAQELSA 762 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~ 762 (785)
+||+|.++.+.|++
T Consensus 246 ~Rp~~~~~~~~l~~ 259 (262)
T cd05071 246 ERPTFEYLQAFLED 259 (262)
T ss_pred cCCCHHHHHHHHHH
Confidence 99999999999875
No 139
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.04 E-value=1e-06 Score=90.40 Aligned_cols=86 Identities=24% Similarity=0.310 Sum_probs=53.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++|||||||++.|++| |+.|..-. ..+.....+.+........ .+...+.+++..|.+.+|++
T Consensus 191 E~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~ 264 (277)
T cd05062 191 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM---SNEQVLRFVMEGGLLDKPD---NCPDMLFELMRMCWQYNPKM 264 (277)
T ss_pred hHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcCCChhh
Confidence 44445567889999999999999999 67774210 0000000011111100000 11224567888999999999
Q ss_pred CCChHHHHHHHHh
Q 003931 750 RPSMRFVAQELSA 762 (785)
Q Consensus 750 Rp~m~~vv~~l~~ 762 (785)
||+|.||+++|++
T Consensus 265 Rps~~e~l~~l~~ 277 (277)
T cd05062 265 RPSFLEIISSIKE 277 (277)
T ss_pred CcCHHHHHHHhhC
Confidence 9999999998753
No 140
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.03 E-value=1.3e-06 Score=89.49 Aligned_cols=77 Identities=17% Similarity=0.228 Sum_probs=47.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.++|||||||+++|++||+.|.+-..............++.+... . ....+.++...|...+|.+||++.||
T Consensus 192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~li~~~l~~~p~~Rpt~~~i 266 (272)
T cd06637 192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSK--K---WSKKFQSFIESCLVKNHSQRPTTEQL 266 (272)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCC--C---cCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 467799999999999999999999641111100000000011111110 1 11234566789999999999999998
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
++
T Consensus 267 l~ 268 (272)
T cd06637 267 MK 268 (272)
T ss_pred hh
Confidence 64
No 141
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.03 E-value=1.8e-06 Score=87.35 Aligned_cols=82 Identities=22% Similarity=0.401 Sum_probs=54.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+..+...+.++||||||+++.|+++ |+.|.. +...+... . .+.... .....+.++...|
T Consensus 168 pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~-----~~~~~~------~~~~~~~~li~~~ 235 (256)
T cd05039 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-Y-----RMEAPE------GCPPEVYKVMKDC 235 (256)
T ss_pred chhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-C-----CCCCcc------CCCHHHHHHHHHH
Confidence 344455667889999999999999997 888853 11111100 0 000000 0112345677889
Q ss_pred CCCCCCCCCChHHHHHHHHhc
Q 003931 743 TSTTPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~~ 763 (785)
+..+|++||++.||.++|+.+
T Consensus 236 l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 236 WELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred hccChhhCcCHHHHHHHHhcC
Confidence 999999999999999999754
No 142
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.01 E-value=1.6e-06 Score=90.26 Aligned_cols=87 Identities=17% Similarity=0.271 Sum_probs=54.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++|||||||++.|++| |+.|..-.. ......+.++.......... .-..+.++...|.+.+|++
T Consensus 213 E~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~cl~~~p~~ 287 (302)
T cd05055 213 ESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP---VDSKFYKLIKEGYRMAQPEH--APAEIYDIMKTCWDADPLK 287 (302)
T ss_pred hhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC---chHHHHHHHHcCCcCCCCCC--CCHHHHHHHHHHcCCCchh
Confidence 44445567889999999999999999 888842100 00000011111110000000 0123567788999999999
Q ss_pred CCChHHHHHHHHh
Q 003931 750 RPSMRFVAQELSA 762 (785)
Q Consensus 750 Rp~m~~vv~~l~~ 762 (785)
||+|.||++.|++
T Consensus 288 Rpt~~ell~~l~~ 300 (302)
T cd05055 288 RPTFKQIVQLIGK 300 (302)
T ss_pred CcCHHHHHHHHHh
Confidence 9999999999876
No 143
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=98.01 E-value=1.1e-06 Score=95.00 Aligned_cols=85 Identities=26% Similarity=0.388 Sum_probs=62.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCc-ccccccc-cCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGE-LFLKDVL-DQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~-~~~~~~~-d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|.-.-.+.|..+||||||||+-|+++ |.||. |=... +-+.+|- +-+|.. ..+|-..+.++++.|++.+-
T Consensus 804 EAIa~RKFTsASDVWSyGIVmWEVmSyGERPY----WdmSNQdVIkaIe~gyRLPp----PmDCP~aL~qLMldCWqkdR 875 (996)
T KOG0196|consen 804 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY----WDMSNQDVIKAIEQGYRLPP----PMDCPAALYQLMLDCWQKDR 875 (996)
T ss_pred hHhhhcccCchhhccccceEEEEecccCCCcc----cccchHHHHHHHHhccCCCC----CCCCcHHHHHHHHHHHHHHh
Confidence 44455789999999999999999987 99994 21111 1111121 234432 34577888999999999999
Q ss_pred CCCCChHHHHHHHHhc
Q 003931 748 DTRPSMRFVAQELSAK 763 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~ 763 (785)
.+||...++|..|+++
T Consensus 876 ~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 876 NRRPKFAQIVSTLDKL 891 (996)
T ss_pred hcCCCHHHHHHHHHHH
Confidence 9999999999999864
No 144
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.01 E-value=2.2e-06 Score=88.51 Aligned_cols=88 Identities=19% Similarity=0.193 Sum_probs=52.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhh--ccC---cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITS--LSG---ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~--~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
|+......+.++||||+||++.|++||+.|.+.... ... .......-.+.+.............+.++...|++.
T Consensus 173 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 252 (287)
T cd06621 173 ERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEK 252 (287)
T ss_pred HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCC
Confidence 444445668899999999999999999999652211 000 000000000111100000000112356788999999
Q ss_pred CCCCCCChHHHHH
Q 003931 746 TPDTRPSMRFVAQ 758 (785)
Q Consensus 746 ~p~~Rp~m~~vv~ 758 (785)
+|++||+|.||++
T Consensus 253 ~p~~Rpt~~eil~ 265 (287)
T cd06621 253 DPTRRPTPWDMLE 265 (287)
T ss_pred CcccCCCHHHHHh
Confidence 9999999999976
No 145
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.01 E-value=3.3e-06 Score=86.32 Aligned_cols=83 Identities=27% Similarity=0.378 Sum_probs=55.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchh------hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELI------TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~------~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++|||||||+++|++| |+.|.... .+....... .... . +-..+.++...|+
T Consensus 178 E~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~------~~~~---~---~~~~~~~li~~~l 245 (270)
T cd05056 178 ESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL------PMPP---N---CPPTLYSLMTKCW 245 (270)
T ss_pred hhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC------CCCC---C---CCHHHHHHHHHHc
Confidence 33334456789999999999999996 99985311 111111000 0101 1 1123455677899
Q ss_pred CCCCCCCCChHHHHHHHHhccc
Q 003931 744 STTPDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~~~~~ 765 (785)
..+|++||++.++++.|+++..
T Consensus 246 ~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 246 AYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999988765
No 146
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.01 E-value=3.3e-06 Score=85.77 Aligned_cols=84 Identities=26% Similarity=0.411 Sum_probs=53.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+-.....+.++|||||||++.|++| |+.|..-... ....+.++. ...... . .-..+.+++..|...+|
T Consensus 173 e~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~-~---~~~~~~~li~~~l~~~p 244 (260)
T cd05067 173 EAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNLERGYRMPRPD-N---CPEELYELMRLCWKEKP 244 (260)
T ss_pred HHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh----HHHHHHHHcCCCCCCCC-C---CCHHHHHHHHHHccCCh
Confidence 44444567889999999999999999 8988531000 000000000 000000 1 11235677889999999
Q ss_pred CCCCChHHHHHHHHh
Q 003931 748 DTRPSMRFVAQELSA 762 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~ 762 (785)
++||++.++...|+.
T Consensus 245 ~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 245 EERPTFEYLRSVLED 259 (260)
T ss_pred hhCCCHHHHHHHhhc
Confidence 999999999998864
No 147
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.00 E-value=3.2e-06 Score=86.20 Aligned_cols=80 Identities=20% Similarity=0.280 Sum_probs=47.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccC-cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
..+.++|||||||+++|++||+.|.+-...... ...... -.+.+.... ........+.++...|.+.+|++||++.+
T Consensus 183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (267)
T cd06610 183 GYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGA-DYKKYSKSFRKMISLCLQKDPSKRPTAEE 260 (267)
T ss_pred CcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCcc-ccccccHHHHHHHHHHcCCChhhCcCHHH
Confidence 578899999999999999999999641111100 000000 011111100 00011123456677899999999999999
Q ss_pred HHH
Q 003931 756 VAQ 758 (785)
Q Consensus 756 vv~ 758 (785)
+++
T Consensus 261 ll~ 263 (267)
T cd06610 261 LLK 263 (267)
T ss_pred Hhh
Confidence 864
No 148
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.99 E-value=4.4e-06 Score=84.84 Aligned_cols=81 Identities=28% Similarity=0.514 Sum_probs=53.8
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
+|+......+.++|||||||++.|++| |+.|.. ...+.... ..+.... . .-..+.++...|
T Consensus 172 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~-~---~~~~~~~~i~~~ 239 (260)
T cd05073 172 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG--------YRMPRPE-N---CPEELYNIMMRC 239 (260)
T ss_pred HhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC--------CCCCCcc-c---CCHHHHHHHHHH
Confidence 355455667889999999999999999 887743 11111110 0000000 0 112355677899
Q ss_pred CCCCCCCCCChHHHHHHHHh
Q 003931 743 TSTTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~ 762 (785)
.+.+|++||++.+|.++|+.
T Consensus 240 l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 240 WKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cccCcccCcCHHHHHHHHhc
Confidence 99999999999999999874
No 149
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.98 E-value=2.9e-06 Score=85.81 Aligned_cols=86 Identities=23% Similarity=0.353 Sum_probs=52.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+......+.++|||||||++.|+++ |+.|..-...- ...+.+.......... .....+.+++..|.+.+|++
T Consensus 167 e~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~ 240 (254)
T cd05083 167 EALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK----EVKECVEKGYRMEPPE--GCPADVYVLMTSCWETEPKK 240 (254)
T ss_pred HHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH----HHHHHHhCCCCCCCCC--cCCHHHHHHHHHHcCCChhh
Confidence 44445567889999999999999998 88874310000 0000000000000000 01123457788999999999
Q ss_pred CCChHHHHHHHHh
Q 003931 750 RPSMRFVAQELSA 762 (785)
Q Consensus 750 Rp~m~~vv~~l~~ 762 (785)
||+|.+|+..|++
T Consensus 241 Rp~~~~l~~~l~~ 253 (254)
T cd05083 241 RPSFHKLREKLEK 253 (254)
T ss_pred CcCHHHHHHHHcc
Confidence 9999999998753
No 150
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.97 E-value=2.3e-06 Score=88.60 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=47.8
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.|+|||||||++.|++||+.|.........-.......-+.+... .+....+.++...|.+.+|++||+|.|+
T Consensus 209 ~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~i 284 (291)
T cd06639 209 SYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHP----EKWCRSFNHFISQCLIKDFEARPSVTHL 284 (291)
T ss_pred ccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcc----cccCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 357899999999999999999999642111100000000000111100 0111235677889999999999999998
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
.+
T Consensus 285 l~ 286 (291)
T cd06639 285 LE 286 (291)
T ss_pred hc
Confidence 64
No 151
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.97 E-value=4.2e-06 Score=85.42 Aligned_cols=75 Identities=23% Similarity=0.350 Sum_probs=46.1
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCccccc--ccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLK--DVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
.+.++|||||||+++|++||+.|.............. .-..+.+.. ... ..+..+...|++.+|++||+|.|
T Consensus 188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~li~~~l~~~p~~Rpt~~~ 261 (268)
T cd06624 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE---SLS---AEAKNFILRCFEPDPDKRASAHD 261 (268)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCc---ccC---HHHHHHHHHHcCCCchhCCCHHH
Confidence 5689999999999999999999953111100000000 000111111 111 12446678999999999999999
Q ss_pred HHH
Q 003931 756 VAQ 758 (785)
Q Consensus 756 vv~ 758 (785)
|++
T Consensus 262 ll~ 264 (268)
T cd06624 262 LLQ 264 (268)
T ss_pred HHh
Confidence 864
No 152
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.96 E-value=3.3e-06 Score=85.92 Aligned_cols=82 Identities=18% Similarity=0.167 Sum_probs=51.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||++.|++||+.|.+-... ......+-+........ .....+.++...|++.+|++|
T Consensus 180 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~p~~R 253 (265)
T cd08217 180 EQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQLASKIKEGKFRRIPY---RYSSELNEVIKSMLNVDPDKR 253 (265)
T ss_pred hhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HHHHHHHhcCCCCCCcc---ccCHHHHHHHHHHccCCcccC
Confidence 444445578899999999999999999999642110 00000011111100000 111234577789999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|+|.+|++
T Consensus 254 p~~~~il~ 261 (265)
T cd08217 254 PSTEELLQ 261 (265)
T ss_pred CCHHHHhh
Confidence 99999975
No 153
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.96 E-value=3.5e-06 Score=89.04 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=55.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc---hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE---LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
|.......+.++|||||||+++|+++ |+.|.. ...+.. .+.+........ .....+.+++..|.+.+
T Consensus 206 E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~------~~~~~~~~~~~~---~~~~~l~~li~~cl~~~ 276 (334)
T cd05100 206 EALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK------LLKEGHRMDKPA---NCTHELYMIMRECWHAV 276 (334)
T ss_pred HHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH------HHHcCCCCCCCC---CCCHHHHHHHHHHcccC
Confidence 33334556789999999999999999 777742 111110 000100000000 11124557788999999
Q ss_pred CCCCCChHHHHHHHHhccc
Q 003931 747 PDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 747 p~~Rp~m~~vv~~l~~~~~ 765 (785)
|++||+|.|+++.|.++..
T Consensus 277 p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 277 PSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred hhhCcCHHHHHHHHHHHhh
Confidence 9999999999999998864
No 154
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.96 E-value=2.8e-06 Score=87.73 Aligned_cols=88 Identities=23% Similarity=0.283 Sum_probs=55.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||++.|+++ |+.|..-... +.....+.+........ .+-..+.+++..|.+.+|+
T Consensus 190 pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~ 263 (288)
T cd05061 190 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVLKFVMDGGYLDQPD---NCPERVTDLMRMCWQFNPK 263 (288)
T ss_pred HHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcCCChh
Confidence 355455667899999999999999999 6767421000 00011111111110000 1113456778899999999
Q ss_pred CCCChHHHHHHHHhc
Q 003931 749 TRPSMRFVAQELSAK 763 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~ 763 (785)
+||+|.|+++.+++.
T Consensus 264 ~Rps~~~ll~~l~~~ 278 (288)
T cd05061 264 MRPTFLEIVNLLKDD 278 (288)
T ss_pred HCcCHHHHHHHHHhh
Confidence 999999999998763
No 155
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.95 E-value=2.5e-06 Score=86.05 Aligned_cols=86 Identities=22% Similarity=0.295 Sum_probs=53.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||++.|++| |+.|... +.. ....+.++....... ....-..+.++...|...+|+
T Consensus 164 PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~--~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~ 237 (251)
T cd05041 164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPG--MSN--QQTRERIESGYRMPA--PQLCPEEIYRLMLQCWAYDPE 237 (251)
T ss_pred hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCcc--CCH--HHHHHHHhcCCCCCC--CccCCHHHHHHHHHHhccChh
Confidence 354445667889999999999999999 7777421 100 000111111100000 001112456778899999999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||++.||.+.|+
T Consensus 238 ~Rp~~~ell~~l~ 250 (251)
T cd05041 238 NRPSFSEIYNELQ 250 (251)
T ss_pred hCcCHHHHHHHhh
Confidence 9999999999885
No 156
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.95 E-value=3.8e-06 Score=85.07 Aligned_cols=80 Identities=20% Similarity=0.284 Sum_probs=50.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc---hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE---LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+......+.++|||||||+++|++||+.|.+ ..+++.. ...+.+++.. . .... .+.++...|...+
T Consensus 171 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~-~---~~~~---~~~~~i~~~l~~~ 241 (257)
T cd08225 171 PEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLK--ICQGYFAPIS-P---NFSR---DLRSLISQLFKVS 241 (257)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH--HhcccCCCCC-C---CCCH---HHHHHHHHHhccC
Confidence 354455667899999999999999999999964 1111111 0111111111 0 1111 2345567799999
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|++||+|.||++
T Consensus 242 p~~Rpt~~~ll~ 253 (257)
T cd08225 242 PRDRPSITSILK 253 (257)
T ss_pred hhhCcCHHHHhh
Confidence 999999999965
No 157
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.95 E-value=3.1e-06 Score=88.27 Aligned_cols=79 Identities=19% Similarity=0.252 Sum_probs=47.9
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.|+|||||||++.|++||+.|..-............--.+.+.. ...-..+.++.-.|.+.+|++||+|.+
T Consensus 189 ~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~ 263 (307)
T cd06607 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSS-----NDWSDYFRNFVDSCLQKIPQDRPSSEE 263 (307)
T ss_pred CCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCc-----hhhCHHHHHHHHHHhcCChhhCcCHHH
Confidence 446789999999999999999999853110000000000000011110 011123456667999999999999999
Q ss_pred HHHH
Q 003931 756 VAQE 759 (785)
Q Consensus 756 vv~~ 759 (785)
|+..
T Consensus 264 il~~ 267 (307)
T cd06607 264 LLKH 267 (307)
T ss_pred HhcC
Confidence 9764
No 158
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.94 E-value=4.6e-07 Score=76.67 Aligned_cols=84 Identities=25% Similarity=0.364 Sum_probs=46.2
Q ss_pred CCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCChhccCCCCCCEEE
Q 003931 222 SKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIPSEIEKLTSLENLD 301 (785)
Q Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 301 (785)
..|+..++++|.+. .+|+.+-..++.++.+++++|.++ .+|..+..++.|+.++++.|.+. ..|..+..+.++..||
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 44444555555554 455554444455555666666555 34555556666666666666555 3444455555555666
Q ss_pred CcCCccc
Q 003931 302 LSGNQLS 308 (785)
Q Consensus 302 Ls~n~l~ 308 (785)
..+|.+.
T Consensus 130 s~~na~~ 136 (177)
T KOG4579|consen 130 SPENARA 136 (177)
T ss_pred CCCCccc
Confidence 6555554
No 159
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.94 E-value=5.1e-06 Score=88.13 Aligned_cols=88 Identities=24% Similarity=0.310 Sum_probs=55.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.++|||||||++.|+++ |+.|..-... .....+.+.. ....+... -..+.+++..|++.+|
T Consensus 251 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~cl~~~p 323 (343)
T cd05103 251 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEEFCRRLKEGTRMRAPDYT----TPEMYQTMLDCWHGEP 323 (343)
T ss_pred HHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc---cHHHHHHHhccCCCCCCCCC----CHHHHHHHHHHccCCh
Confidence 44445567889999999999999997 8887431100 0000000000 00000001 1235678899999999
Q ss_pred CCCCChHHHHHHHHhccc
Q 003931 748 DTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~~~ 765 (785)
++||+|.||++.|+.+-+
T Consensus 324 ~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 324 SQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhCcCHHHHHHHHHHHHh
Confidence 999999999999987644
No 160
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.94 E-value=3.9e-06 Score=85.04 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=51.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCch---hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGEL---ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+......+.++||||||++++|++||+.|.+- ...... ...... +.+.. . .-..+.++...|.+.+
T Consensus 171 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~--~~~~~~-~~~~~---~---~~~~~~~li~~~l~~~ 241 (257)
T cd08223 171 PELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR--IIEGKL-PPMPK---D---YSPELGELIATMLSKR 241 (257)
T ss_pred hhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH--HHhcCC-CCCcc---c---cCHHHHHHHHHHhccC
Confidence 3555556678899999999999999999998541 111100 000000 01110 0 1123557788999999
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|++||+|+++++
T Consensus 242 p~~Rp~~~~~l~ 253 (257)
T cd08223 242 PEKRPSVKSILR 253 (257)
T ss_pred cccCCCHHHHhc
Confidence 999999999864
No 161
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.94 E-value=4.7e-06 Score=94.43 Aligned_cols=80 Identities=24% Similarity=0.362 Sum_probs=56.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc-------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE-------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~-------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
|--.....|.|+|||||||+|.|++| |.-|.. +.++++... ++. ....|-.++..++..|
T Consensus 491 Esl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~--------r~~----~P~~c~~eiY~iM~~C 558 (609)
T KOG0200|consen 491 ESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGN--------RME----QPEHCSDEIYDLMKSC 558 (609)
T ss_pred HHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC--------CCC----CCCCCCHHHHHHHHHH
Confidence 43344678999999999999999999 555531 222222111 111 1223445567889999
Q ss_pred CCCCCCCCCChHHHHHHHHh
Q 003931 743 TSTTPDTRPSMRFVAQELSA 762 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l~~ 762 (785)
++.+|++||+..+.+..++.
T Consensus 559 W~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 559 WNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred hCCCcccCCCHHHHHHHHHH
Confidence 99999999999999999877
No 162
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.92 E-value=6.8e-06 Score=84.76 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=47.8
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.++|||||||++.|++||+.|..-......-........+.+..+. ... ..+..+...|.+.+|++||+|.|
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~li~~~l~~~p~~Rps~~e 279 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPE-LWS---NEFNDFIRKCLTKDYEKRPTVSD 279 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCC-CcC---HHHHHHHHHHccCCcccCCCHHH
Confidence 34678999999999999999999996411110000000000001110000 000 12446677899999999999999
Q ss_pred HHHH
Q 003931 756 VAQE 759 (785)
Q Consensus 756 vv~~ 759 (785)
|++.
T Consensus 280 ll~~ 283 (286)
T cd06638 280 LLQH 283 (286)
T ss_pred Hhhc
Confidence 9753
No 163
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.92 E-value=2.5e-06 Score=91.91 Aligned_cols=86 Identities=17% Similarity=0.261 Sum_probs=54.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccCC--CCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQR--LPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~~--l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.++|||||||+++|++| |+.|..-.. ......+.+... ...+. . .-..+.+++-.|...+|
T Consensus 311 E~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~---~~~~~~~~~~~~~~~~~p~-~---~~~~l~~li~~cl~~~P 383 (401)
T cd05107 311 ESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP---MNEQFYNAIKRGYRMAKPA-H---ASDEIYEIMQKCWEEKF 383 (401)
T ss_pred HHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC---chHHHHHHHHcCCCCCCCC-C---CCHHHHHHHHHHcCCCh
Confidence 33334456789999999999999998 888843110 000011111111 11110 1 11235567778999999
Q ss_pred CCCCChHHHHHHHHhc
Q 003931 748 DTRPSMRFVAQELSAK 763 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~~ 763 (785)
++||+|+||++.|+++
T Consensus 384 ~~RPs~~ell~~L~~~ 399 (401)
T cd05107 384 EIRPDFSQLVHLVGDL 399 (401)
T ss_pred hHCcCHHHHHHHHHHH
Confidence 9999999999999875
No 164
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.91 E-value=3.9e-06 Score=86.79 Aligned_cols=85 Identities=16% Similarity=0.213 Sum_probs=49.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||+++|++||+.|.........-......+.+........ .+. +..+.-.|...+|.+|
T Consensus 188 E~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~li~~~l~~~P~~R 263 (292)
T cd06658 188 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKV-SSV---LRGFLDLMLVREPSQR 263 (292)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcccccccc-CHH---HHHHHHHHccCChhHC
Confidence 444455678899999999999999999999531100000000111112222111001 112 2234556899999999
Q ss_pred CChHHHHHH
Q 003931 751 PSMRFVAQE 759 (785)
Q Consensus 751 p~m~~vv~~ 759 (785)
|++.||++.
T Consensus 264 pt~~~il~~ 272 (292)
T cd06658 264 ATAQELLQH 272 (292)
T ss_pred cCHHHHhhC
Confidence 999999763
No 165
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.89 E-value=1.9e-06 Score=81.62 Aligned_cols=189 Identities=22% Similarity=0.154 Sum_probs=93.7
Q ss_pred CCCCCCccEEECCCCCCcccCChh---hhcCCCCCcEEECCCCCCcccCCc-------------cccCCCCCcEEEcCCC
Q 003931 73 ILTCRNLTYLDLSLNKLSGLIPER---LFTNLGKLEYLNLTENQFQGKLSP-------------NVSKLSNLIDLRLATN 136 (785)
Q Consensus 73 ~~~l~~L~~L~Ls~n~i~~~~~~~---~f~~l~~L~~L~Ls~n~i~~~~~~-------------~~~~l~~L~~L~L~~n 136 (785)
+.+|++|+..+||.|.+....|+. +.++-..|++|.+++|.+...--. ....-+.|+......|
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 344555555555555444333321 224445555555555544311111 1123456666666666
Q ss_pred cccccCC----cCCCCCCCCCEEEcccCccccc-----CCccccCCCCCCEEEcccCcCcccCC----ccccCCcccCee
Q 003931 137 KFSGPIP----GDIGSMSNLQLVELFNNSFTGQ-----IPSSLGQLKNLQHLDLRMNALNYTIP----PELGLCTNLSYL 203 (785)
Q Consensus 137 ~~~~~~~----~~l~~l~~L~~L~L~~n~~~~~-----~~~~l~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L 203 (785)
++..-.. ..+..=.+|+++.+..|.|.-. ....+..+.+|+.||+..|.++.... ..+..-+.|+.|
T Consensus 168 Rlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL 247 (388)
T COG5238 168 RLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLREL 247 (388)
T ss_pred hhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhc
Confidence 6542110 0112224666777777665421 11123345677777777776652211 222333456777
Q ss_pred eccccccccCCchhc----c--CCCCCCEEEccCCCCccccCcc------ccCCCCCCCEEEeecCcCcc
Q 003931 204 ALAVNQLSGGLPLSL----S--NLSKLNDLGLSDNFLSGEISAN------LIGNWTELESLQIQNNSFMG 261 (785)
Q Consensus 204 ~l~~n~i~~~~~~~l----~--~l~~L~~L~L~~n~l~~~~~~~------~~~~l~~L~~L~L~~n~l~~ 261 (785)
.+..|-++.....++ . ..++|..|...+|...+.+... .-.+++-|..|.+.+|++..
T Consensus 248 ~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 248 RLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred cccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 777776654332222 1 2466777777777665533222 12356667777777777653
No 166
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.89 E-value=8.6e-07 Score=75.04 Aligned_cols=83 Identities=30% Similarity=0.297 Sum_probs=41.6
Q ss_pred CCcEEEccCCeeeeecccchhcccccceeccccceeeeccCcchhccccCCeeecccCccccCCCcccccCCCCCeeccc
Q 003931 465 RLDFIRLSGNQFVGEISPDWGECRNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVKLFNLNLS 544 (785)
Q Consensus 465 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls 544 (785)
.|+..+|++|.+....+..-...+.++.+++++|.|+ .+|.++..++.|+.++++.|.+. ..|..+..+.++-.|+.-
T Consensus 54 el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 54 ELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred eEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 4445555555555333332233345555555555555 34455555555555555555554 334444445555555555
Q ss_pred CCccc
Q 003931 545 NNHLT 549 (785)
Q Consensus 545 ~n~l~ 549 (785)
+|.+.
T Consensus 132 ~na~~ 136 (177)
T KOG4579|consen 132 ENARA 136 (177)
T ss_pred CCccc
Confidence 55444
No 167
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.89 E-value=5.4e-06 Score=83.92 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=49.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|.......+.++|||||||++.|++||+.|.+-... ......+........... .-..+.++...|++.+|++|
T Consensus 171 E~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~R 244 (256)
T cd08220 171 ELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKIMSGTFAPISDR---YSPDLRQLILSMLNLDPSKR 244 (256)
T ss_pred hhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHHHhcCCCCCCCC---cCHHHHHHHHHHccCChhhC
Confidence 333344567899999999999999999999541100 000000110000000000 11234567789999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|+|.|+++
T Consensus 245 pt~~~ll~ 252 (256)
T cd08220 245 PQLSQIMA 252 (256)
T ss_pred CCHHHHhh
Confidence 99999875
No 168
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.89 E-value=3.8e-06 Score=85.53 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=51.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCc--ccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGE--LFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
+|+......+.++||||||+++.|++||+.|..-..-.... .....+.+......... ..-..+.++...|+..+|
T Consensus 168 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p 245 (265)
T cd06605 168 PERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSG--KFSPDFQDFVNLCLIKDP 245 (265)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChh--hcCHHHHHHHHHHcCCCc
Confidence 35555557789999999999999999999985311000000 00011111111000000 011224466778999999
Q ss_pred CCCCChHHHHH
Q 003931 748 DTRPSMRFVAQ 758 (785)
Q Consensus 748 ~~Rp~m~~vv~ 758 (785)
++||++.+++.
T Consensus 246 ~~Rpt~~~ll~ 256 (265)
T cd06605 246 RERPSYKELLE 256 (265)
T ss_pred hhCcCHHHHhh
Confidence 99999999864
No 169
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.89 E-value=8.5e-06 Score=83.11 Aligned_cols=77 Identities=19% Similarity=0.293 Sum_probs=46.8
Q ss_pred ccccccceeeeehhhhhhhhC-CCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMG-RHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltg-k~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
..+.++|||||||+++|++|+ +.|.+ ....+. .+....+.++.+..... +.+. ++.-.|. .+|++
T Consensus 184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~---~l~~~c~-~~P~~ 255 (268)
T cd05086 184 EQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI-KDQQVKLFKPQLELPYS---ERWY---EVLQFCW-LSPEK 255 (268)
T ss_pred CCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hhcccccCCCccCCCCc---HHHH---HHHHHHh-hCccc
Confidence 457899999999999999985 55643 111111 11122344555432211 2222 2334577 56999
Q ss_pred CCChHHHHHHHH
Q 003931 750 RPSMRFVAQELS 761 (785)
Q Consensus 750 Rp~m~~vv~~l~ 761 (785)
||+|++|+++|.
T Consensus 256 Rp~~~~i~~~l~ 267 (268)
T cd05086 256 RATAEEVHRLLT 267 (268)
T ss_pred CCCHHHHHHHhc
Confidence 999999998873
No 170
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.89 E-value=6.8e-06 Score=85.18 Aligned_cols=83 Identities=18% Similarity=0.238 Sum_probs=50.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccccccccc--CCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLD--QRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
+|+-.....+.++|||||||++.|++||+.|..-... .........+ +.+..+. . .-..+.++...|...+|
T Consensus 185 PE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~-~---~~~~l~~li~~~l~~~p 258 (296)
T cd06654 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATNGTPELQNPE-K---LSAIFRDFLNRCLDMDV 258 (296)
T ss_pred HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH--HHhHHHHhcCCCCCCCCcc-c---cCHHHHHHHHHHCcCCc
Confidence 3444455678899999999999999999999531000 0000000000 1111000 0 01224456778999999
Q ss_pred CCCCChHHHHH
Q 003931 748 DTRPSMRFVAQ 758 (785)
Q Consensus 748 ~~Rp~m~~vv~ 758 (785)
++||++.||++
T Consensus 259 ~~Rpt~~eil~ 269 (296)
T cd06654 259 EKRGSAKELLQ 269 (296)
T ss_pred ccCcCHHHHhh
Confidence 99999999986
No 171
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.88 E-value=6.3e-06 Score=83.66 Aligned_cols=84 Identities=27% Similarity=0.407 Sum_probs=52.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccccC-CCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLDQ-RLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
+|.......+.++||||+||++.|++| |+.|.+-..... ....+.+. ....+. . .-..+.++...|+..+|
T Consensus 176 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~-~---~~~~~~~li~~~l~~~p 248 (262)
T cd00192 176 PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYLRKGYRLPKPE-Y---CPDELYELMLSCWQLDP 248 (262)
T ss_pred HHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCCCCCCCc-c---CChHHHHHHHHHccCCc
Confidence 344444567889999999999999999 588864211100 00011110 110000 1 11235567788999999
Q ss_pred CCCCChHHHHHHH
Q 003931 748 DTRPSMRFVAQEL 760 (785)
Q Consensus 748 ~~Rp~m~~vv~~l 760 (785)
++||++.|+++.|
T Consensus 249 ~~Rps~~~l~~~l 261 (262)
T cd00192 249 EDRPTFSELVERL 261 (262)
T ss_pred ccCcCHHHHHHhh
Confidence 9999999999876
No 172
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.88 E-value=2.7e-05 Score=70.98 Aligned_cols=126 Identities=21% Similarity=0.132 Sum_probs=67.3
Q ss_pred CCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECC
Q 003931 31 VRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLT 110 (785)
Q Consensus 31 L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls 110 (785)
=+.++|.+.++..+..-. .-..+...+||++|.+... ..|..++.|.+|.+.+|+|+ .|...+-.-+++|+.|.|.
T Consensus 21 e~e~~LR~lkip~ienlg-~~~d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIENLG-ATLDQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccccchhhcc-ccccccceecccccchhhc--ccCCCccccceEEecCCcce-eeccchhhhccccceEEec
Confidence 344555555554443200 1123455566666665432 34555666666666666666 3444443445666666666
Q ss_pred CCCCcccC-CccccCCCCCcEEEcCCCcccccCC---cCCCCCCCCCEEEcccC
Q 003931 111 ENQFQGKL-SPNVSKLSNLIDLRLATNKFSGPIP---GDIGSMSNLQLVELFNN 160 (785)
Q Consensus 111 ~n~i~~~~-~~~~~~l~~L~~L~L~~n~~~~~~~---~~l~~l~~L~~L~L~~n 160 (785)
+|+|.... -..+..|+.|++|.+-+|.++..-- ..+..+++|++||..+-
T Consensus 97 nNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 97 NNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred CcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 66655221 1234556677777777766653211 13456777777777654
No 173
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.88 E-value=5e-06 Score=84.31 Aligned_cols=76 Identities=25% Similarity=0.397 Sum_probs=47.3
Q ss_pred ccccccceeeeehhhhhhhhCCC-CCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRH-PGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~-p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
..+.++|||||||++.|++||+. |..-..... ...+.+.+..-+... -..+.++.-.|.+.+|++||+|++
T Consensus 181 ~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~ 252 (258)
T cd05078 181 NLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK----KLQFYEDRHQLPAPK----WTELANLINQCMDYEPDFRPSFRA 252 (258)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCChhhccHHH----HHHHHHccccCCCCC----cHHHHHHHHHHhccChhhCCCHHH
Confidence 35789999999999999999964 422110000 000111111001001 123457788899999999999999
Q ss_pred HHHHH
Q 003931 756 VAQEL 760 (785)
Q Consensus 756 vv~~l 760 (785)
++++|
T Consensus 253 il~~l 257 (258)
T cd05078 253 IIRDL 257 (258)
T ss_pred HHHhc
Confidence 99886
No 174
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.87 E-value=7.1e-06 Score=83.29 Aligned_cols=86 Identities=30% Similarity=0.456 Sum_probs=54.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhh-CCCCCchhhhccCccccccccc-CCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLD-QRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
+|+......+.++|||||||++.|++| |+.|..-.. .......+.. .....+... -..+.+++..|...+|
T Consensus 173 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~l~~~p 245 (261)
T cd05034 173 PEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT---NREVLEQVERGYRMPRPPNC----PEELYDLMLQCWDKDP 245 (261)
T ss_pred HHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCCCCCCCCC----CHHHHHHHHHHcccCc
Confidence 355555667889999999999999999 888842100 0000000000 000000001 1235677889999999
Q ss_pred CCCCChHHHHHHHHh
Q 003931 748 DTRPSMRFVAQELSA 762 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~ 762 (785)
++||++.++++.|+.
T Consensus 246 ~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 246 EERPTFEYLQSFLED 260 (261)
T ss_pred ccCCCHHHHHHHHhc
Confidence 999999999988864
No 175
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.86 E-value=9.5e-06 Score=84.15 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=56.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|..-.............-.+....+ .... ..+.++...|.+.+|++
T Consensus 184 PE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~li~~~l~~~p~~ 259 (297)
T cd06656 184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNP-ERLS---AVFRDFLNRCLEMDVDR 259 (297)
T ss_pred HHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCc-cccC---HHHHHHHHHHccCChhh
Confidence 3544456678899999999999999999998531100000000000000111000 0001 12345677899999999
Q ss_pred CCChHHHHH--HHHhcccccCCC
Q 003931 750 RPSMRFVAQ--ELSAKTQAYLPE 770 (785)
Q Consensus 750 Rp~m~~vv~--~l~~~~~~~~~~ 770 (785)
||+|.||++ .++..+..+...
T Consensus 260 Rps~~~il~~~~~~~~~~~~~~~ 282 (297)
T cd06656 260 RGSAKELLQHPFLKLAKPLSSLT 282 (297)
T ss_pred CcCHHHHhcCchhcccccccccC
Confidence 999999987 455554444333
No 176
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.86 E-value=1.2e-05 Score=82.20 Aligned_cols=77 Identities=29% Similarity=0.342 Sum_probs=45.6
Q ss_pred ccccccceeeeehhhhhhhh-CCCCCchh------hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMM-GRHPGELI------TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLEllt-gk~p~~~~------~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
..+.++|||||||+++|++| |+.|..-. .+... .......++.+... ..+.+. ++.-.|. .+|++
T Consensus 185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~---~l~~~c~-~~P~~ 256 (269)
T cd05087 185 DQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR-EQQLKLPKPRLKLP---LSDRWY---EVMQFCW-LQPEQ 256 (269)
T ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh-cccCCCCCCccCCC---CChHHH---HHHHHHh-cCccc
Confidence 35789999999999999996 99885311 01000 01111222222111 112222 2334576 57999
Q ss_pred CCChHHHHHHHH
Q 003931 750 RPSMRFVAQELS 761 (785)
Q Consensus 750 Rp~m~~vv~~l~ 761 (785)
||+|.||++.|.
T Consensus 257 Rpt~~~l~~~l~ 268 (269)
T cd05087 257 RPSAEEVHLLLS 268 (269)
T ss_pred CCCHHHHHHHhc
Confidence 999999998874
No 177
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.85 E-value=6e-06 Score=85.26 Aligned_cols=78 Identities=22% Similarity=0.253 Sum_probs=48.5
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc---cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCh
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL---DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSM 753 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m 753 (785)
..+.++|||||||++.|++||+.|..-..... ....++. .+.+..... ...-..+.++.-.|.+.+|++||++
T Consensus 186 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~ 261 (288)
T cd06616 186 GYDVRSDVWSLGITLYEVATGKFPYPKWNSVF--DQLTQVVKGDPPILSNSEE--REFSPSFVNFINLCLIKDESKRPKY 261 (288)
T ss_pred CCcchhhhhHHHHHHHHHHhCCCCchhcchHH--HHHhhhcCCCCCcCCCcCC--CccCHHHHHHHHHHccCChhhCcCH
Confidence 56789999999999999999999953110000 0011111 112211100 0112235567789999999999999
Q ss_pred HHHHH
Q 003931 754 RFVAQ 758 (785)
Q Consensus 754 ~~vv~ 758 (785)
.||++
T Consensus 262 ~~i~~ 266 (288)
T cd06616 262 KELLE 266 (288)
T ss_pred HHHhc
Confidence 99875
No 178
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.85 E-value=7.1e-06 Score=83.35 Aligned_cols=78 Identities=19% Similarity=0.314 Sum_probs=48.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCc-ccccccccC-CCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGE-LFLKDVLDQ-RLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~-~~~~~~~d~-~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
..+.++|||||||++.|++||+.|..-....... ....+.+.+ .+.. .......+.++.-.|...+|.+||++.
T Consensus 180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~ 255 (262)
T cd06613 180 GYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKD----KEKWSPVFHDFIKKCLTKDPKKRPTAT 255 (262)
T ss_pred CcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccc----hhhhhHHHHHHHHHHcCCChhhCCCHH
Confidence 6778999999999999999999995311100000 000010111 1110 011122356778899999999999999
Q ss_pred HHHH
Q 003931 755 FVAQ 758 (785)
Q Consensus 755 ~vv~ 758 (785)
||+.
T Consensus 256 ~il~ 259 (262)
T cd06613 256 KLLQ 259 (262)
T ss_pred HHhc
Confidence 9864
No 179
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.85 E-value=6.1e-06 Score=84.51 Aligned_cols=78 Identities=17% Similarity=0.197 Sum_probs=47.2
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.|+|||||||++.|++||+.|..-...............+.+.. .......+.++...|.+.+|++||++.||
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~~l 269 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS----PENWSKKFNDFISECLIKNYEQRPFMEEL 269 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCc----hhhcCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 45679999999999999999999953110000000000001111111 01111234467778999999999999999
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
++
T Consensus 270 l~ 271 (275)
T cd06608 270 LE 271 (275)
T ss_pred hc
Confidence 75
No 180
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.84 E-value=7.2e-06 Score=82.94 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=50.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccc-ccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELF-LKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++||||||+++.|++||+.|.+--.+...... ......+ +.. ... ..+.++.-.|++.+|++
T Consensus 170 E~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~---~~~---~~~~~li~~~l~~~P~~ 242 (255)
T cd08219 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP-LPS---HYS---YELRSLIKQMFKRNPRS 242 (255)
T ss_pred HHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC-CCc---ccC---HHHHHHHHHHHhCCccc
Confidence 444445678899999999999999999999641111100000 0000010 100 111 12345567899999999
Q ss_pred CCChHHHHHH
Q 003931 750 RPSMRFVAQE 759 (785)
Q Consensus 750 Rp~m~~vv~~ 759 (785)
||++.|++..
T Consensus 243 Rp~~~~il~~ 252 (255)
T cd08219 243 RPSATTILSR 252 (255)
T ss_pred CCCHHHHhhc
Confidence 9999999754
No 181
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.84 E-value=7.1e-06 Score=84.19 Aligned_cols=77 Identities=19% Similarity=0.293 Sum_probs=48.1
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.++|||||||++.|++||+.|.+-...............+.+... .....+.++...|...+|++||++.|+
T Consensus 178 ~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~l~~~p~~R~~~~~i 252 (277)
T cd06917 178 YYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDN-----GYSKLLREFVAACLDEEPKERLSAEEL 252 (277)
T ss_pred ccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcc-----cCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 357899999999999999999999641111100000001111111110 012235567788999999999999999
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
++
T Consensus 253 l~ 254 (277)
T cd06917 253 LK 254 (277)
T ss_pred hh
Confidence 75
No 182
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.84 E-value=7.9e-06 Score=83.63 Aligned_cols=77 Identities=21% Similarity=0.320 Sum_probs=48.6
Q ss_pred cccccccceeeeehhhhhh-hhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 676 MRVTDKCDVFSFGVVALEV-MMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLEl-ltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
...+.++|||||||+++|+ ++|+.|..-. .......+.+.....+... ...+.+++..|.+.+|++||+|.
T Consensus 196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~ 267 (274)
T cd05076 196 NSLSTAADKWSFGTTLLEICFDGEVPLKER----TPSEKERFYEKKHRLPEPS----CKELATLISQCLTYEPTQRPSFR 267 (274)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCcccc----ChHHHHHHHHhccCCCCCC----ChHHHHHHHHHcccChhhCcCHH
Confidence 3467899999999999999 5788875310 0000011111111111101 12355778899999999999999
Q ss_pred HHHHHH
Q 003931 755 FVAQEL 760 (785)
Q Consensus 755 ~vv~~l 760 (785)
+|++.|
T Consensus 268 ~il~~L 273 (274)
T cd05076 268 TILRDL 273 (274)
T ss_pred HHHHhh
Confidence 998876
No 183
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.84 E-value=3.7e-06 Score=87.09 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=52.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhh----ccC--cccccccccCCCCCCCchhHHHHHHHHHHHhhcCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITS----LSG--ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTS 744 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~----~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~ 744 (785)
|+......+.++|||||||+++|++||+.|..-... +.. .+....+..+.+... . +-..+.++.-.|..
T Consensus 203 e~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~ 277 (294)
T PHA02882 203 DAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIK--N---ANKFIYDFIECVTK 277 (294)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccC--C---CCHHHHHHHHHHHh
Confidence 444556678999999999999999999999531100 000 000111111111100 1 11234566778999
Q ss_pred CCCCCCCChHHHHHHH
Q 003931 745 TTPDTRPSMRFVAQEL 760 (785)
Q Consensus 745 ~~p~~Rp~m~~vv~~l 760 (785)
.+|++||++.++.+.+
T Consensus 278 ~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 278 LSYEEKPDYDALIKIF 293 (294)
T ss_pred CCCCCCCCHHHHHHhh
Confidence 9999999999998765
No 184
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.84 E-value=1.8e-06 Score=81.84 Aligned_cols=88 Identities=23% Similarity=0.217 Sum_probs=41.6
Q ss_pred CCCCCcEEECcCcccccc----CChhccCCCCCCEEECcCCcccccCCccC------cCCCCCCEEEcccccccCCCCCC
Q 003931 269 LLTKLQYLFLYRNNFSGP----IPSEIEKLTSLENLDLSGNQLSGTIPPTL------WNLTNLLSLQLFSNNLSGTIPPE 338 (785)
Q Consensus 269 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l------~~l~~L~~L~L~~n~l~~~~p~~ 338 (785)
.+.+|+.|+|+.|-++-. +..++...+.|+.|.+.+|-++..-..++ ...|+|..|...+|...+.+-..
T Consensus 212 y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~ 291 (388)
T COG5238 212 YSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILD 291 (388)
T ss_pred HhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeee
Confidence 345555555555554321 11223344455556665555543221111 12355666666666544321111
Q ss_pred -------CCCCCCCCEEEccCCcCc
Q 003931 339 -------IGSMASLVAFDVNTNQLH 356 (785)
Q Consensus 339 -------~~~l~~L~~L~l~~n~l~ 356 (785)
-+.++-|..+.+.+|++.
T Consensus 292 ~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 292 ISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred echhhhhhcccHHHHHHHHccCcch
Confidence 134566666677777765
No 185
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.83 E-value=8.4e-06 Score=83.62 Aligned_cols=83 Identities=18% Similarity=0.282 Sum_probs=51.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|..-............---+.+... .-..+.++...|.+.+|++|
T Consensus 171 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~l~~~p~~R 244 (277)
T cd06641 171 EVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGN------YSKPLKEFVEACLNKEPSFR 244 (277)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcc------cCHHHHHHHHHHccCChhhC
Confidence 444455677899999999999999999999641110000000000000111110 11234567788999999999
Q ss_pred CChHHHHHH
Q 003931 751 PSMRFVAQE 759 (785)
Q Consensus 751 p~m~~vv~~ 759 (785)
|+|.++++.
T Consensus 245 p~~~~~l~~ 253 (277)
T cd06641 245 PTAKELLKH 253 (277)
T ss_pred cCHHHHHhC
Confidence 999999873
No 186
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.83 E-value=7.1e-06 Score=84.55 Aligned_cols=81 Identities=15% Similarity=0.226 Sum_probs=50.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCch---hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGEL---ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+..+...+.++|||||||++.|++||+.|..- ...... ......+...... . .-..+.++.-.|.+.+|
T Consensus 185 E~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~-~---~~~~l~~li~~~l~~~p 257 (285)
T cd06648 185 EVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNLPPKLKNLH-K---VSPRLRSFLDRMLVRDP 257 (285)
T ss_pred HHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH---HHhcCCCCCcccc-c---CCHHHHHHHHHHcccCh
Confidence 444445568899999999999999999999531 111100 0001111111110 0 01235567788999999
Q ss_pred CCCCChHHHHH
Q 003931 748 DTRPSMRFVAQ 758 (785)
Q Consensus 748 ~~Rp~m~~vv~ 758 (785)
++||++.++++
T Consensus 258 ~~Rpt~~~il~ 268 (285)
T cd06648 258 AQRATAAELLN 268 (285)
T ss_pred hhCcCHHHHcc
Confidence 99999999864
No 187
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.83 E-value=4.2e-06 Score=86.00 Aligned_cols=80 Identities=24% Similarity=0.358 Sum_probs=48.6
Q ss_pred hhcccccccceeeeehhhhhhhhCCCCCchhh----hccCcccccccc---cCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMMGRHPGELIT----SLSGELFLKDVL---DQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~----~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
.....+.++|||||||++.|++||+.|.+-.. +.........+. .+.+... ... ..+.++...|.+.+
T Consensus 166 ~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~li~~~l~~~ 240 (279)
T cd06619 166 SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG--QFS---EKFVHFITQCMRKQ 240 (279)
T ss_pred cCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC--cCC---HHHHHHHHHHhhCC
Confidence 34456789999999999999999999964110 000000001111 1111110 011 12456677899999
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|++||+|.||++
T Consensus 241 P~~Rp~~~eil~ 252 (279)
T cd06619 241 PKERPAPENLMD 252 (279)
T ss_pred hhhCCCHHHHhc
Confidence 999999999865
No 188
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.82 E-value=4.6e-05 Score=79.16 Aligned_cols=178 Identities=20% Similarity=0.279 Sum_probs=106.6
Q ss_pred chhcccccceeccccceeeeccCcchhccccCCeeecccCccccCCCcccccCCCCCeecccCC-cccCcCCcccccCCC
Q 003931 483 DWGECRNLSNLQLDRNRISGGIPAELGNLTRLGVLSLDSNELTGKIPTDLGKLVKLFNLNLSNN-HLTGEIPKSISNLTE 561 (785)
Q Consensus 483 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n-~l~~~~p~~~~~l~~ 561 (785)
.+..|..++.|++++|.++. +|. + -.+|+.|+++++.-...+|..+. .+|++|++++| .+. .+|. +
T Consensus 47 r~~~~~~l~~L~Is~c~L~s-LP~-L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~-sLP~------s 113 (426)
T PRK15386 47 QIEEARASGRLYIKDCDIES-LPV-L--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEIS-GLPE------S 113 (426)
T ss_pred HHHHhcCCCEEEeCCCCCcc-cCC-C--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccc-cccc------c
Confidence 35667899999999998873 452 2 24699999988555446676553 58999999998 444 4554 5
Q ss_pred CCeEecCCCcCc--cCCCccccccCCCcEEeCCCCc-Ccc-cCCcccchh-hhhhheeecccccCCCCCCcccccCCCCc
Q 003931 562 LAYLDLSNNKLT--GDVPQELGRFDKLLSLNLSHND-LSG-EIPSNLGNL-FVLQYMLDLSSNSLSGTIPQELGKLTSLE 636 (785)
Q Consensus 562 L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~ls~N~-l~~-~~p~~~~~l-~~l~~~l~ls~n~l~~~~~~~~~~l~~L~ 636 (785)
|+.|+++++... +.+|. +|+.|.+.+++ ... .+|. .+ .+|+. |++++|... ..|..+. .+|+
T Consensus 114 Le~L~L~~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~---~LPsSLk~-L~Is~c~~i-~LP~~LP--~SLk 180 (426)
T PRK15386 114 VRSLEIKGSATDSIKNVPN------GLTSLSINSYNPENQARIDN---LISPSLKT-LSLTGCSNI-ILPEKLP--ESLQ 180 (426)
T ss_pred cceEEeCCCCCcccccCcc------hHhheecccccccccccccc---ccCCcccE-EEecCCCcc-cCccccc--ccCc
Confidence 777788776543 23343 45566664322 110 1111 11 23444 788877754 3344333 5888
Q ss_pred eEeccCCce------eeecCCcccccccceeeecCCCchhhhhhhcccccccceeee
Q 003931 637 ILNLSRNQL------SGRIPASLSSMISLRSVDFSDNELTELAVTMRVTDKCDVFSF 687 (785)
Q Consensus 637 ~L~l~~n~l------~~~~~~~~~~l~~l~~l~l~~n~l~e~~~~~~~t~k~DVYSf 687 (785)
+|+++.+.. ...+|+.+ .+.-...+.++.+.+++-+.++......|+|+|
T Consensus 181 ~L~ls~n~~~sLeI~~~sLP~nl-~L~f~n~lkL~~~~f~d~~i~~~~~~~~~~~~~ 236 (426)
T PRK15386 181 SITLHIEQKTTWNISFEGFPDGL-DIDLQNSVLLSPDVFKDKNITFQGNALDVALHF 236 (426)
T ss_pred EEEecccccccccCccccccccc-EechhhhcccCHHHhhcccccccCcccchhccc
Confidence 888877631 22455555 343334455666666666666555555577776
No 189
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.82 E-value=7.5e-06 Score=82.50 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=50.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++||||||+++.|++||+.|.+-..............-+.+.... . .-..+.++...|.+.+|++
T Consensus 166 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~i~~~l~~~p~~ 241 (253)
T cd05122 166 PEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPE-K---WSDEFKDFLKKCLQKNPEK 241 (253)
T ss_pred HHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCccc-c---cCHHHHHHHHHHccCChhh
Confidence 35544555789999999999999999999996421110000000000000111000 0 0123456677999999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|.||.+
T Consensus 242 R~t~~~~l~ 250 (253)
T cd05122 242 RPTAEQLLK 250 (253)
T ss_pred CCCHHHHhc
Confidence 999999864
No 190
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=97.80 E-value=2.1e-05 Score=73.88 Aligned_cols=85 Identities=20% Similarity=0.317 Sum_probs=59.2
Q ss_pred hhcccccccceeeeehhhhhhhhCCCCCchhhhccCccc-ccccccCCCCCCCc-hhHHHHHHHHHHHhhcCCCCCCCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELF-LKDVLDQRLPPPTG-QLAEAVVLTINVALACTSTTPDTRP 751 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~-~~~~~d~~l~~~~~-~~~~~~~~~~~ial~C~~~~p~~Rp 751 (785)
....+++|.||||+|++|.+++-|-.|.+.+.. +.+. .-.|..+.+..+.. ...+. +.++.-.|.+.+|.+||
T Consensus 214 ~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--~GgSlaLAv~n~q~s~P~~~~yse~---l~~lik~mlqvdP~qRP 288 (302)
T KOG2345|consen 214 SHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--QGGSLALAVQNAQISIPNSSRYSEA---LHQLIKSMLQVDPNQRP 288 (302)
T ss_pred cCcccccccchhhhhHHHHHHHHcCCcchHHhh--cCCeEEEeeeccccccCCCCCccHH---HHHHHHHHhcCCcccCC
Confidence 345678999999999999999999999873322 2222 23455555543221 11222 34556689999999999
Q ss_pred ChHHHHHHHHhc
Q 003931 752 SMRFVAQELSAK 763 (785)
Q Consensus 752 ~m~~vv~~l~~~ 763 (785)
+..++...++..
T Consensus 289 ~i~~ll~~~d~L 300 (302)
T KOG2345|consen 289 TIPELLSKLDDL 300 (302)
T ss_pred CHHHHHHHHHhh
Confidence 999999888754
No 191
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.80 E-value=1e-05 Score=82.09 Aligned_cols=76 Identities=29% Similarity=0.409 Sum_probs=48.3
Q ss_pred ccccccceeeeehhhhhhhhC-CCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMG-RHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltg-k~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
..+.++|||||||+++|+++| ..|............ ..+....... . ...+.++...|...+|++||+|.|
T Consensus 182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~-~----~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 182 SLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERF---YQDQHRLPMP-D----CAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHH---HhcCCCCCCC-C----chHHHHHHHHHhccChhhCCCHHH
Confidence 678899999999999999995 555421111000000 0011111100 1 134567788999999999999999
Q ss_pred HHHHH
Q 003931 756 VAQEL 760 (785)
Q Consensus 756 vv~~l 760 (785)
|++.|
T Consensus 254 il~~l 258 (259)
T cd05037 254 ILRDL 258 (259)
T ss_pred HHHhc
Confidence 99876
No 192
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.79 E-value=2e-05 Score=81.25 Aligned_cols=88 Identities=14% Similarity=0.086 Sum_probs=50.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCch-------hhhcc---Cc---cccccc------ccCCCCCCCchhHHH
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGEL-------ITSLS---GE---LFLKDV------LDQRLPPPTGQLAEA 731 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~-------~~~~~---~~---~~~~~~------~d~~l~~~~~~~~~~ 731 (785)
|+......+.|+|||||||++.||+||+.|.+. .+... .. .+.... ...............
T Consensus 176 E~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T cd07838 176 EVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPE 255 (287)
T ss_pred HHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhh
Confidence 444556678899999999999999999877431 11110 00 000000 000000000000001
Q ss_pred -HHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 732 -VVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 732 -~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
...+.++...|++.+|++||+|.|+++
T Consensus 256 ~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 256 ICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 123457788999999999999999863
No 193
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.79 E-value=1.1e-05 Score=82.13 Aligned_cols=82 Identities=20% Similarity=0.336 Sum_probs=49.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||++.|++||+.|.+-..-...-....+...+.+.. ...+ .+..+.-.|.+.+|.+|
T Consensus 182 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~li~~~l~~~p~~R 255 (267)
T cd06628 182 EVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPS---NISS---EAIDFLEKTFEIDHNKR 255 (267)
T ss_pred hHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCc---ccCH---HHHHHHHHHccCCchhC
Confidence 44444566789999999999999999999964111000000011111222211 1112 23345568999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|++.||++
T Consensus 256 p~~~~il~ 263 (267)
T cd06628 256 PTAAELLK 263 (267)
T ss_pred cCHHHHhh
Confidence 99999864
No 194
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.79 E-value=6.7e-06 Score=84.71 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=52.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhh------ccC--cccccccccCCCCCCCchhHHHHHHHHHHHhhc
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITS------LSG--ELFLKDVLDQRLPPPTGQLAEAVVLTINVALAC 742 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~------~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C 742 (785)
|+-.....+.++|||||||+++|++||+.|.+-..- ... ......+........ ...+.-..+.++...|
T Consensus 172 E~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~ 249 (284)
T cd06620 172 ERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL--PSSDFPEDLRDFVDAC 249 (284)
T ss_pred HHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC--CchhcCHHHHHHHHHH
Confidence 444445678899999999999999999999641100 000 000111111111000 0011112355677889
Q ss_pred CCCCCCCCCChHHHHHHH
Q 003931 743 TSTTPDTRPSMRFVAQEL 760 (785)
Q Consensus 743 ~~~~p~~Rp~m~~vv~~l 760 (785)
.+.+|++||+|.||.++.
T Consensus 250 l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 250 LLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hcCCcccCcCHHHHhcCc
Confidence 999999999999998864
No 195
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.79 E-value=9.4e-06 Score=82.19 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=50.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCC-CCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLP-PPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++||||||++++|+++|+.|.+-...... ....+.+.... ...... -..+.++...|++.+|+
T Consensus 172 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~l~~~i~~~l~~~p~ 246 (260)
T cd06606 172 PEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGSSGEPPEIPEHL---SEEAKDFLRKCLRRDPK 246 (260)
T ss_pred HhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccccCCCcCCCccc---CHHHHHHHHHhCcCChh
Confidence 3444455588999999999999999999999542110000 00011110000 000011 12345667789999999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+||+|.|+++
T Consensus 247 ~Rp~~~~ll~ 256 (260)
T cd06606 247 KRPTADELLQ 256 (260)
T ss_pred hCCCHHHHhh
Confidence 9999999864
No 196
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.79 E-value=4.3e-05 Score=69.64 Aligned_cols=125 Identities=22% Similarity=0.184 Sum_probs=75.7
Q ss_pred CcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCCCcEEEcC
Q 003931 55 LTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLA 134 (785)
Q Consensus 55 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 134 (785)
=+.+++.+.++..+.. .=..+.+...+||++|.+. .++. |.+++.|.+|.|.+|+|+.+.|.--.-+++|+.|.|.
T Consensus 21 e~e~~LR~lkip~ien-lg~~~d~~d~iDLtdNdl~-~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIEN-LGATLDQFDAIDLTDNDLR-KLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccccchhh-ccccccccceecccccchh-hccc--CCCccccceEEecCCcceeeccchhhhccccceEEec
Confidence 3445555555442221 0112345677888888776 3333 5777888888888888886666555556778888888
Q ss_pred CCcccccC-CcCCCCCCCCCEEEcccCcccccC---CccccCCCCCCEEEccc
Q 003931 135 TNKFSGPI-PGDIGSMSNLQLVELFNNSFTGQI---PSSLGQLKNLQHLDLRM 183 (785)
Q Consensus 135 ~n~~~~~~-~~~l~~l~~L~~L~L~~n~~~~~~---~~~l~~l~~L~~L~l~~ 183 (785)
+|.+.... -.-+..|++|++|.+-+|.....- -..+..+++|+.||+..
T Consensus 97 nNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 97 NNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred CcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 87766321 123556777777777777665321 12355666677666654
No 197
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.79 E-value=1.1e-05 Score=81.98 Aligned_cols=83 Identities=22% Similarity=0.211 Sum_probs=50.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchh---hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELI---TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+..+...+.++||||||++++|++||+.|.+-. .+............+..... . ....+.++...|++.+|
T Consensus 170 E~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~l~~li~~~l~~~p 244 (264)
T cd06623 170 ERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAE--E---FSPEFRDFISACLQKDP 244 (264)
T ss_pred hhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcc--c---CCHHHHHHHHHHccCCh
Confidence 4444446788999999999999999999996422 11110000001111111110 0 11234456667999999
Q ss_pred CCCCChHHHHH
Q 003931 748 DTRPSMRFVAQ 758 (785)
Q Consensus 748 ~~Rp~m~~vv~ 758 (785)
++||++.++++
T Consensus 245 ~~R~~~~~ll~ 255 (264)
T cd06623 245 KKRPSAAELLQ 255 (264)
T ss_pred hhCCCHHHHHh
Confidence 99999999976
No 198
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.78 E-value=1.1e-05 Score=83.34 Aligned_cols=83 Identities=17% Similarity=0.279 Sum_probs=48.1
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc----------hhhhccC-ccccccccc----------CCCCCCCchh---HHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG-ELFLKDVLD----------QRLPPPTGQL---AEA 731 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~-~~~~~~~~d----------~~l~~~~~~~---~~~ 731 (785)
...+.++|||||||++.|++||+.|.. +..+... .....+..+ +......... ...
T Consensus 176 ~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (286)
T cd07846 176 TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKL 255 (286)
T ss_pred cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCc
Confidence 346789999999999999999998753 1111000 000011111 1110000000 001
Q ss_pred HHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 732 VVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 732 ~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
...+.++...|.+.+|++||+|.+|++
T Consensus 256 ~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 256 SGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 234567888999999999999999864
No 199
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.78 E-value=1.2e-05 Score=82.88 Aligned_cols=83 Identities=18% Similarity=0.148 Sum_probs=48.6
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhh----------hccC---cc-----cccccccCCCCCCCchhHH-----HH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELIT----------SLSG---EL-----FLKDVLDQRLPPPTGQLAE-----AV 732 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~----------~~~~---~~-----~~~~~~d~~l~~~~~~~~~-----~~ 732 (785)
...+.++|||||||++.|++||+.|..... +... +. ...+.++..+......... .-
T Consensus 174 ~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (283)
T cd07830 174 TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNAS 253 (283)
T ss_pred cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCC
Confidence 346789999999999999999997753110 0000 00 0011111111100000000 11
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
..+.++...|.+.+|++||++.||+.
T Consensus 254 ~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 254 PEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHHHhcccCcccCCCHHHHhh
Confidence 34668899999999999999999864
No 200
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.78 E-value=1e-05 Score=83.21 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=46.2
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.++|||||||+++|++||+.|..-...............+.+..+. .... .+.++...|.+.+|.+||+|.+|
T Consensus 184 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~li~~~l~~~p~~Rp~~~~i 259 (282)
T cd06643 184 PYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPS-RWSS---EFKDFLKKCLEKNVDARWTTTQL 259 (282)
T ss_pred CCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCcc-ccCH---HHHHHHHHHccCChhhCcCHHHH
Confidence 4567999999999999999999995411110000000000011111110 1111 23466779999999999999988
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
++
T Consensus 260 l~ 261 (282)
T cd06643 260 LQ 261 (282)
T ss_pred hc
Confidence 54
No 201
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.78 E-value=5.1e-06 Score=92.21 Aligned_cols=80 Identities=25% Similarity=0.360 Sum_probs=50.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc---hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE---LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+-.....+.|+|||||||++.|++||+.|.+ ....+.. ......++ +.. .. -..+.++.-.|.+.+
T Consensus 214 PE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~--~~~~~~~~-~~~---~~---~~~l~~li~~~L~~d 284 (496)
T PTZ00283 214 PEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK--TLAGRYDP-LPP---SI---SPEMQEIVTALLSSD 284 (496)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH--HhcCCCCC-CCC---CC---CHHHHHHHHHHcccC
Confidence 355455567899999999999999999999964 1111100 00000111 100 11 122446677899999
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|++||++.+|++
T Consensus 285 P~~RPs~~ell~ 296 (496)
T PTZ00283 285 PKRRPSSSKLLN 296 (496)
T ss_pred hhhCcCHHHHHh
Confidence 999999999875
No 202
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.77 E-value=8.7e-06 Score=83.26 Aligned_cols=75 Identities=24% Similarity=0.366 Sum_probs=46.3
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhh----ccC-cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITS----LSG-ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~----~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
.+.++|||||||++.|+++|+.|.+.... ... .......+++.... +.-..+.++...|+..+|++||+
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps 262 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM------NLSPVALDFLNACFTINPDNRPT 262 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc------cCCHHHHHHHHHHhcCChhhCCC
Confidence 67899999999999999999999641100 000 00000111111100 01123445567899999999999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
|.||++
T Consensus 263 ~~~il~ 268 (272)
T cd06629 263 ARELLQ 268 (272)
T ss_pred HHHHhh
Confidence 999875
No 203
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.77 E-value=1.4e-05 Score=84.35 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=27.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+......+.++|||||||++.|++||+.|..
T Consensus 171 PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 171 PERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred HhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 355555667889999999999999999999963
No 204
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.77 E-value=9.4e-06 Score=85.51 Aligned_cols=26 Identities=31% Similarity=0.488 Sum_probs=23.5
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++|||||||++.|++||+.|.+
T Consensus 186 ~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 186 GYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 46789999999999999999999964
No 205
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.76 E-value=1.1e-05 Score=83.40 Aligned_cols=88 Identities=15% Similarity=0.234 Sum_probs=50.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc----------hhhhccC---ccccc------ccccCCCCCCCchhH-H
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG---ELFLK------DVLDQRLPPPTGQLA-E 730 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~---~~~~~------~~~d~~l~~~~~~~~-~ 730 (785)
|.-.....+.++|||||||++.|++||+.|.. ++..... +.+.. ..+++.-........ .
T Consensus 179 E~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
T cd07862 179 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 258 (290)
T ss_pred HHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccC
Confidence 44344556789999999999999999998853 1111110 01111 111111100000000 0
Q ss_pred HHHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 731 AVVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 731 ~~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.-..+.++...|.+.+|++||++.|+++
T Consensus 259 ~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 259 IDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0012346788999999999999999863
No 206
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.76 E-value=1.2e-05 Score=86.08 Aligned_cols=81 Identities=20% Similarity=0.336 Sum_probs=57.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhC-CCCCchhhhccC-cccccccccC--CCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMG-RHPGELITSLSG-ELFLKDVLDQ--RLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltg-k~p~~~~~~~~~-~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
|.-...+.+.++|||+|||-+.||+|+ ..| |+-. .-.+.+-+|. +|.. ...|-..+++++..|++..
T Consensus 285 EsLrh~kFShaSDvWmyGVTiWEMFtyGEeP-----W~G~~g~qIL~~iD~~erLpR----Pk~csedIY~imk~cWah~ 355 (1039)
T KOG0199|consen 285 ESLRHRKFSHASDVWMYGVTIWEMFTYGEEP-----WVGCRGIQILKNIDAGERLPR----PKYCSEDIYQIMKNCWAHN 355 (1039)
T ss_pred hHhccccccccchhhhhhhhHHhhhccCCCC-----CCCCCHHHHHHhccccccCCC----CCCChHHHHHHHHHhccCC
Confidence 444567889999999999999999995 555 3322 1123344442 2222 2245567788999999999
Q ss_pred CCCCCChHHHHHHH
Q 003931 747 PDTRPSMRFVAQEL 760 (785)
Q Consensus 747 p~~Rp~m~~vv~~l 760 (785)
|++||+..++++++
T Consensus 356 paDRptFsair~~~ 369 (1039)
T KOG0199|consen 356 PADRPTFSAIREDL 369 (1039)
T ss_pred ccccccHHHHHHhH
Confidence 99999999998654
No 207
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.76 E-value=1.3e-05 Score=81.51 Aligned_cols=82 Identities=22% Similarity=0.401 Sum_probs=49.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccc--cccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFL--KDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+-.....+.++|||||||++.|++||+.|..-.......... .+...+.+... .. ..+..+...|.+.+|+
T Consensus 178 e~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~i~~~l~~~p~ 251 (265)
T cd06631 178 EVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDS---FS---AAAIDFVTSCLTRDQH 251 (265)
T ss_pred hhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCC---CC---HHHHHHHHHHhcCCcc
Confidence 4434455678999999999999999999996411111000000 00111222111 11 1234567789999999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+||+|.||.+
T Consensus 252 ~Rp~~~~~l~ 261 (265)
T cd06631 252 ERPSALQLLR 261 (265)
T ss_pred cCCCHHHHhc
Confidence 9999998853
No 208
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.76 E-value=2.1e-05 Score=82.02 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=26.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
|+..+...+.++|||||||+++|++||+.|..
T Consensus 168 E~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 168 ERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred hHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 44444557789999999999999999999853
No 209
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.75 E-value=1.3e-05 Score=83.25 Aligned_cols=86 Identities=14% Similarity=0.218 Sum_probs=50.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.....+.|+|||||||+++|++||+.|.....-............+...... ... ..+.++.-.|.+.+|++
T Consensus 186 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~l~~~i~~~l~~~P~~ 261 (297)
T cd06659 186 PEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAH-KIS---PVLRDFLERMLTREPQE 261 (297)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccC-CCC---HHHHHHHHHHhcCCccc
Confidence 35545556788999999999999999999995310000000000000000000000 001 12345667899999999
Q ss_pred CCChHHHHHH
Q 003931 750 RPSMRFVAQE 759 (785)
Q Consensus 750 Rp~m~~vv~~ 759 (785)
||++.+|++.
T Consensus 262 Rps~~~ll~~ 271 (297)
T cd06659 262 RATAQELLDH 271 (297)
T ss_pred CcCHHHHhhC
Confidence 9999999873
No 210
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.75 E-value=1e-05 Score=83.44 Aligned_cols=84 Identities=21% Similarity=0.289 Sum_probs=49.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||+++|++||+.|..-...... ...+......... .....-..+.++.-.|.+.+|.+|
T Consensus 186 E~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R 261 (286)
T cd06614 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA---LFLITTKGIPPLK-NPEKWSPEFKDFLNKCLVKDPEKR 261 (286)
T ss_pred hHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhcCCCCCc-chhhCCHHHHHHHHHHhccChhhC
Confidence 333344567899999999999999999998531111000 0000000000000 000011234567789999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|+|.+|++
T Consensus 262 pt~~~il~ 269 (286)
T cd06614 262 PSAEELLQ 269 (286)
T ss_pred cCHHHHhh
Confidence 99999975
No 211
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.75 E-value=1e-05 Score=83.22 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=47.0
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.++|||||||++.|++||+.|..-..-............+..... ..-..+.++.-.|.+.+|++||+..|
T Consensus 201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~Rp~~~e 275 (282)
T cd06636 201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSK-----KWSKKFIDFIEGCLVKNYLSRPSTEQ 275 (282)
T ss_pred cCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCccc-----ccCHHHHHHHHHHhCCChhhCcCHHH
Confidence 3567899999999999999999999531100000000000011111100 01123556677999999999999998
Q ss_pred HHH
Q 003931 756 VAQ 758 (785)
Q Consensus 756 vv~ 758 (785)
+++
T Consensus 276 ll~ 278 (282)
T cd06636 276 LLK 278 (282)
T ss_pred Hhc
Confidence 853
No 212
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.75 E-value=1e-05 Score=83.93 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=49.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|.+-..-...........-+.+..+. .. -..+.++...|...+|++|
T Consensus 185 E~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~li~~~l~~dp~~R 260 (296)
T cd06655 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE-KL---SPIFRDFLNRCLEMDVEKR 260 (296)
T ss_pred chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcc-cC---CHHHHHHHHHHhhcChhhC
Confidence 3333455678999999999999999999996411100000000000000111110 01 1123456678999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|+|.+|++
T Consensus 261 pt~~~il~ 268 (296)
T cd06655 261 GSAKELLQ 268 (296)
T ss_pred CCHHHHhh
Confidence 99999975
No 213
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.73 E-value=7.8e-06 Score=87.14 Aligned_cols=75 Identities=21% Similarity=0.136 Sum_probs=44.7
Q ss_pred cccccceeeeehhhhhhhhCCCCCch---hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGEL---ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
.+.++|||||||+++|+++|+.|... ..|.........-..+.... ... ..+.++.-.|.+.+|++||++.
T Consensus 250 ~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~l~~li~~~l~~~P~~Rpt~~ 323 (353)
T PLN00034 250 DGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPA---TAS---REFRHFISCCLQREPAKRWSAM 323 (353)
T ss_pred CCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCC---ccC---HHHHHHHHHHccCChhhCcCHH
Confidence 34689999999999999999999541 11100000000000001100 111 1234566789999999999999
Q ss_pred HHHH
Q 003931 755 FVAQ 758 (785)
Q Consensus 755 ~vv~ 758 (785)
||++
T Consensus 324 ell~ 327 (353)
T PLN00034 324 QLLQ 327 (353)
T ss_pred HHhc
Confidence 9976
No 214
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.73 E-value=1.2e-05 Score=83.97 Aligned_cols=79 Identities=19% Similarity=0.294 Sum_probs=47.4
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.++|||||||++.|++||+.|..-............-..+.... .. .-..+.++.-.|++.+|++||++.+
T Consensus 189 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~li~~cl~~~P~~Rp~~~~ 263 (308)
T cd06634 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS--GH---WSEYFRNFVDSCLQKIPQDRPTSEV 263 (308)
T ss_pred CCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCc--cc---ccHHHHHHHHHHhhCCcccCCCHHH
Confidence 456789999999999999999999953110000000000000011100 00 1122445677899999999999999
Q ss_pred HHHH
Q 003931 756 VAQE 759 (785)
Q Consensus 756 vv~~ 759 (785)
|++.
T Consensus 264 ll~~ 267 (308)
T cd06634 264 LLKH 267 (308)
T ss_pred HhhC
Confidence 9764
No 215
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.73 E-value=9.5e-06 Score=85.05 Aligned_cols=81 Identities=20% Similarity=0.243 Sum_probs=49.0
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.++|||||||++.|++||+.|..-... ......+.+...... .....-..+.++.-.|.+.+|++||+|.|
T Consensus 199 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 273 (317)
T cd06635 199 GQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYHIAQNESPTL--QSNEWSDYFRNFVDSCLQKIPQDRPTSEE 273 (317)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHhccCCCC--CCccccHHHHHHHHHHccCCcccCcCHHH
Confidence 4578899999999999999999998421000 000000111000000 00001122456677999999999999999
Q ss_pred HHHHHH
Q 003931 756 VAQELS 761 (785)
Q Consensus 756 vv~~l~ 761 (785)
|.+..-
T Consensus 274 il~~~~ 279 (317)
T cd06635 274 LLKHMF 279 (317)
T ss_pred HHhChh
Confidence 987543
No 216
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.73 E-value=8.8e-06 Score=96.30 Aligned_cols=81 Identities=20% Similarity=0.173 Sum_probs=51.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||+++||++|+.|.+-....... .......+... ........++..|.+.+|.+
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSS-LRHRVLPPQIL-------LNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHH-HHHhhcChhhh-------hcCHHHHHHHHHhCCCChhh
Confidence 45555667789999999999999999999885411100000 00011111110 11222345667899999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+|.||++
T Consensus 256 Rps~~eil~ 264 (793)
T PLN00181 256 RPSMSELLQ 264 (793)
T ss_pred CcChHHHhh
Confidence 999999975
No 217
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.73 E-value=1e-05 Score=80.96 Aligned_cols=85 Identities=19% Similarity=0.174 Sum_probs=52.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc-cCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL-DQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|.......+.++||||||+++.|++||+.|.+... ......+.+ ........ .....-..+.+++..|...+|+
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~ 230 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD---QLLELFKKIGKPKPPFPP-PEWKISPEAKDLIRKLLVKDPE 230 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHhccCCCCcc-ccccCCHHHHHHHHHHccCCch
Confidence 344445677889999999999999999998853210 000000111 01100000 0000113456788899999999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+||+|.+|++
T Consensus 231 ~Rp~~~~~~~ 240 (244)
T smart00220 231 KRLTAEEALQ 240 (244)
T ss_pred hccCHHHHhh
Confidence 9999999975
No 218
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.73 E-value=8.2e-06 Score=84.62 Aligned_cols=80 Identities=19% Similarity=0.244 Sum_probs=48.1
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.++|||||||++.|++||+.|...... .......+++....... ........+.++...|.+.+|++||+|.++
T Consensus 194 ~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~i 270 (296)
T cd06618 194 KYDIRADVWSLGISLVELATGQFPYKNCKT--EFEVLTKILQEEPPSLP-PNEGFSPDFCSFVDLCLTKDHRKRPKYREL 270 (296)
T ss_pred ccccchhHHHHHHHHHHHHhCCCCCCcchh--HHHHHHHHhcCCCCCCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 367899999999999999999999532100 00001111111110000 000011234566789999999999999999
Q ss_pred HHH
Q 003931 757 AQE 759 (785)
Q Consensus 757 v~~ 759 (785)
++.
T Consensus 271 l~~ 273 (296)
T cd06618 271 LQH 273 (296)
T ss_pred hcC
Confidence 754
No 219
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.72 E-value=1e-05 Score=83.33 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=46.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc----------hhhhccCcc---c--ccccccC--CCC-CCCchhHH----HHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSGEL---F--LKDVLDQ--RLP-PPTGQLAE----AVVL 734 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~~~---~--~~~~~d~--~l~-~~~~~~~~----~~~~ 734 (785)
..+.++|||||||++.|++||+.|.. +.++..... + ....-+. ... ........ .-..
T Consensus 176 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (283)
T cd07835 176 QYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDED 255 (283)
T ss_pred ccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHH
Confidence 34678999999999999999998842 111110000 0 0000000 000 00000000 0124
Q ss_pred HHHHHhhcCCCCCCCCCChHHHHH
Q 003931 735 TINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 735 ~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
+.++...|.+.+|++||+|.||++
T Consensus 256 ~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 256 GLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhc
Confidence 557889999999999999999864
No 220
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.72 E-value=2e-05 Score=79.72 Aligned_cols=82 Identities=18% Similarity=0.122 Sum_probs=50.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++||||||++++|+++|+.|.+-..-. .....+....... .....-..+..+...|...+|++|
T Consensus 171 e~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R 244 (256)
T cd08530 171 EVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRYKVQRGKYPP---IPPIYSQDLQNFIRSMLQVKPKLR 244 (256)
T ss_pred HHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCCCC---CchhhCHHHHHHHHHHcCCCcccC
Confidence 4444556778999999999999999999995411100 0000000001100 000112235677889999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|++.||++
T Consensus 245 p~~~~~l~ 252 (256)
T cd08530 245 PNCDKILA 252 (256)
T ss_pred CCHHHHhc
Confidence 99999864
No 221
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.71 E-value=9.8e-06 Score=82.34 Aligned_cols=77 Identities=19% Similarity=0.273 Sum_probs=46.9
Q ss_pred cccccccceeeeehhhhhhh-hCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 676 MRVTDKCDVFSFGVVALEVM-MGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLEll-tgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
...+.++|||||||++.|++ +|+.|..-.. ..+ ............... ...+.++.-.|.+.+|++||+|.
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--~~~--~~~~~~~~~~~~~~~----~~~~~~li~~cl~~dp~~Rp~~~ 255 (262)
T cd05077 184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKT--LAE--KERFYEGQCMLVTPS----CKELADLMTHCMNYDPNQRPFFR 255 (262)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCcc--hhH--HHHHHhcCccCCCCC----hHHHHHHHHHHcCCChhhCcCHH
Confidence 44678999999999999998 5777642100 000 000000000000011 12345677899999999999999
Q ss_pred HHHHHH
Q 003931 755 FVAQEL 760 (785)
Q Consensus 755 ~vv~~l 760 (785)
++++.+
T Consensus 256 ~il~~~ 261 (262)
T cd05077 256 AIMRDI 261 (262)
T ss_pred HHHHhc
Confidence 998765
No 222
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.71 E-value=1e-05 Score=82.49 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=47.3
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCccc-ccccc-cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCh
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELF-LKDVL-DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSM 753 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~-~~~~~-d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m 753 (785)
...+.++|||||||++.|++||+.|..-......... ..... .+...... . .-..+.++.-.|.+.+|++||++
T Consensus 184 ~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~li~~~l~~~P~~Rp~~ 259 (267)
T cd06646 184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKT-K---WSSTFHNFVKISLTKNPKKRPTA 259 (267)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcccc-c---cCHHHHHHHHHHhhCChhhCcCH
Confidence 3457799999999999999999998531111100000 00000 11111000 0 11234566778999999999999
Q ss_pred HHHHH
Q 003931 754 RFVAQ 758 (785)
Q Consensus 754 ~~vv~ 758 (785)
.++++
T Consensus 260 ~~il~ 264 (267)
T cd06646 260 ERLLT 264 (267)
T ss_pred HHHhc
Confidence 99875
No 223
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.70 E-value=7.6e-06 Score=86.75 Aligned_cols=26 Identities=27% Similarity=0.401 Sum_probs=23.5
Q ss_pred cccccccceeeeehhhhhhhhCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
...+.++|||||||++.|++||+.|.
T Consensus 183 ~~~~~~~DvwSlGvvl~el~tg~~pf 208 (338)
T cd07859 183 SKYTPAIDIWSIGCIFAEVLTGKPLF 208 (338)
T ss_pred cccCchhHHHHHHHHHHHHHcCCCCC
Confidence 45678999999999999999999885
No 224
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.69 E-value=1e-05 Score=83.46 Aligned_cols=88 Identities=18% Similarity=0.218 Sum_probs=50.2
Q ss_pred hhhhhc-ccccccceeeeehhhhhhhhCCCCCch----------hhhccC-ccccccc--ccCCCC-----CCC-chhH-
Q 003931 671 ELAVTM-RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG-ELFLKDV--LDQRLP-----PPT-GQLA- 729 (785)
Q Consensus 671 e~~~~~-~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~-~~~~~~~--~d~~l~-----~~~-~~~~- 729 (785)
|+..+. ..+.|+||||||+++.|++||+.|..- ...... .....+. .++... ... ....
T Consensus 171 E~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (288)
T cd07833 171 ELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLE 250 (288)
T ss_pred chhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHH
Confidence 443344 567899999999999999999987530 000000 0000000 001000 000 0000
Q ss_pred -----HHHHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 730 -----EAVVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 730 -----~~~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
..-..+.++...|.+.+|++||+|.+|++
T Consensus 251 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 251 RRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 01234667888999999999999999864
No 225
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.68 E-value=1.9e-05 Score=81.77 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=46.0
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFVA 757 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~vv 757 (785)
.+.++|||||||++.|++||+.|..-...............+....+. .....+.++...|.+.+|++||++.||+
T Consensus 192 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 192 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPS----KWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred CCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCc----ccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 467899999999999999999995311100000000000111111100 1112345667789999999999999986
Q ss_pred H
Q 003931 758 Q 758 (785)
Q Consensus 758 ~ 758 (785)
+
T Consensus 268 ~ 268 (292)
T cd06644 268 E 268 (292)
T ss_pred c
Confidence 4
No 226
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.68 E-value=1e-05 Score=82.96 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=51.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchh-hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELI-TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-.....+.++|||||||++.|++||+.|.... ..+..................... -..+.++.-.|.+.+|+
T Consensus 163 PE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~~P~ 239 (277)
T cd05607 163 PEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNF---TEESKDICRLFLAKKPE 239 (277)
T ss_pred HHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccC---CHHHHHHHHHHhccCHh
Confidence 35555556789999999999999999999995311 000000000111111111000001 11245667789999999
Q ss_pred CCCChHHHHHHH
Q 003931 749 TRPSMRFVAQEL 760 (785)
Q Consensus 749 ~Rp~m~~vv~~l 760 (785)
+||+++|+++..
T Consensus 240 ~R~~~~~~~~~~ 251 (277)
T cd05607 240 DRLGSREKNDDP 251 (277)
T ss_pred hCCCCccchhhh
Confidence 999998876544
No 227
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.67 E-value=1.7e-05 Score=80.30 Aligned_cols=78 Identities=29% Similarity=0.494 Sum_probs=51.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|+......+.++||||+|+++.|+++ |+.|.+ +...+.... ...... . .-..+.++...|.
T Consensus 174 e~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~-~---~~~~~~~~i~~~l 241 (258)
T smart00219 174 ESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY--------RLPKPE-N---CPPEIYKLMLQCW 241 (258)
T ss_pred HHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--------CCCCCC-c---CCHHHHHHHHHHC
Confidence 44445667899999999999999999 677643 111111110 000000 1 1123556788999
Q ss_pred CCCCCCCCChHHHHHHH
Q 003931 744 STTPDTRPSMRFVAQEL 760 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l 760 (785)
..+|++||++.|+.++|
T Consensus 242 ~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 242 AEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCChhhCcCHHHHHhhC
Confidence 99999999999998764
No 228
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.66 E-value=3e-06 Score=85.99 Aligned_cols=89 Identities=24% Similarity=0.329 Sum_probs=53.2
Q ss_pred hhhhh-hcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAV-TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~-~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+.. ....+.++||||+|+++.|++||+.|..-..+............+.+.............+.++...|.+.+|+
T Consensus 167 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 246 (260)
T PF00069_consen 167 PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPE 246 (260)
T ss_dssp HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGG
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChh
Confidence 35554 67889999999999999999999999642111100000111111100000000000013456778889999999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+||+|.++++
T Consensus 247 ~R~~~~~l~~ 256 (260)
T PF00069_consen 247 QRPSAEELLK 256 (260)
T ss_dssp GSTTHHHHHT
T ss_pred HCcCHHHHhc
Confidence 9999999874
No 229
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.65 E-value=1.8e-05 Score=80.54 Aligned_cols=77 Identities=19% Similarity=0.291 Sum_probs=46.1
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhh-hccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELIT-SLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
.+.++||||||+++.|++||+.|.+-.. .............+.+.... . .-..+.++...|++.+|++||+|.|+
T Consensus 183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~li~~~l~~~p~~R~~~~~i 258 (264)
T cd06626 183 HGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSL-Q---LSPEGKDFLDRCLESDPKKRPTASEL 258 (264)
T ss_pred CCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCccc-c---cCHHHHHHHHHHccCCcccCCCHHHH
Confidence 6789999999999999999999953110 00000000111111221110 0 01223456679999999999999998
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
+.
T Consensus 259 ~~ 260 (264)
T cd06626 259 LQ 260 (264)
T ss_pred hc
Confidence 53
No 230
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.65 E-value=4.3e-05 Score=52.40 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=24.9
Q ss_pred CCCcEEEccCCCCCCCccccccCCCCCCEEeCCCCCCCCC
Q 003931 5 SELQYLSVYDNNLNGAIPFQLSSLRKVRYLDLGGNFLETP 44 (785)
Q Consensus 5 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~ 44 (785)
++|++|++++|+|+.+ +..+.++++|++|++++|.|+++
T Consensus 1 ~~L~~L~l~~N~i~~l-~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 1 KNLEELDLSNNQITDL-PPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp TT-SEEEETSSS-SSH-GGHGTTCTTSSEEEETSSCCSBE
T ss_pred CcceEEEccCCCCccc-CchHhCCCCCCEEEecCCCCCCC
Confidence 4677777777777743 33567777777777777776644
No 231
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.64 E-value=2e-05 Score=81.04 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=46.3
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.++|||||||++.|++||+.|..-..-...-........+.+..+. .. -..+.++...|.+.+|++||++.+
T Consensus 183 ~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~li~~~l~~~p~~Rps~~~ 258 (280)
T cd06611 183 NPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPS-KW---SSSFNDFLKSCLVKDPDDRPTAAE 258 (280)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcc-cC---CHHHHHHHHHHhccChhhCcCHHH
Confidence 34577999999999999999999995311000000000000001111110 00 112345667899999999999999
Q ss_pred HHH
Q 003931 756 VAQ 758 (785)
Q Consensus 756 vv~ 758 (785)
|++
T Consensus 259 il~ 261 (280)
T cd06611 259 LLK 261 (280)
T ss_pred Hhc
Confidence 865
No 232
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.64 E-value=4e-05 Score=80.81 Aligned_cols=25 Identities=36% Similarity=0.575 Sum_probs=22.8
Q ss_pred cccccceeeeehhhhhhhhCCCCCc
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
.+.++|||||||++.|+++|+.|..
T Consensus 187 ~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 187 YNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCC
Confidence 5789999999999999999999964
No 233
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.64 E-value=4e-05 Score=78.49 Aligned_cols=80 Identities=26% Similarity=0.400 Sum_probs=51.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
|.......+.++|||||||++.|+++ |+.|.. ++...... ... . .... . .-..+.++...|.
T Consensus 188 E~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~-~---~~~~---~---~~~~l~~~i~~~l 256 (275)
T cd05046 188 EAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG-KLE-L---PVPE---G---CPSRLYKLMTRCW 256 (275)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC-CcC-C---CCCC---C---CCHHHHHHHHHHc
Confidence 43344456788999999999999999 666642 11111100 000 0 0000 0 1124567889999
Q ss_pred CCCCCCCCChHHHHHHHH
Q 003931 744 STTPDTRPSMRFVAQELS 761 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~~l~ 761 (785)
+.+|++||++.|++++|.
T Consensus 257 ~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 257 AVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCcccCCCHHHHHHHhc
Confidence 999999999999998875
No 234
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.63 E-value=2.4e-05 Score=80.42 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=48.6
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc------hhhhccC-----ccc------ccccccCCCCCCCc-hh----HHHHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE------LITSLSG-----ELF------LKDVLDQRLPPPTG-QL----AEAVV 733 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~------~~~~~~~-----~~~------~~~~~d~~l~~~~~-~~----~~~~~ 733 (785)
...+.++|||||||+++|++||+.|.. .+.+... ... .....+........ .. ...-.
T Consensus 174 ~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (282)
T cd07831 174 GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA 253 (282)
T ss_pred CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccH
Confidence 456789999999999999999998753 1111110 000 00000100000000 00 01124
Q ss_pred HHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 734 LTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 734 ~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.+.++...|.+.+|++||+|.||++
T Consensus 254 ~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 254 EGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHhccCcccccCHHHHhh
Confidence 4667888999999999999999864
No 235
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.63 E-value=3.2e-05 Score=78.58 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=47.3
Q ss_pred hhcccccccceeeeehhhhhhhhCCCCCchhhhccC-cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
.+...+.++|||||||++.|++||+.|..-...... ......-..+.+... .-..+.++.-.|+..+|++||+
T Consensus 180 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rpt 253 (263)
T cd06625 180 SGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSH------VSPDARNFLRRTFVENAKKRPS 253 (263)
T ss_pred ccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCcc------CCHHHHHHHHHHhhcCcccCCC
Confidence 344577899999999999999999999431000000 000000001111110 0112345667899999999999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
+.|+++
T Consensus 254 ~~~ll~ 259 (263)
T cd06625 254 AEELLR 259 (263)
T ss_pred HHHHhh
Confidence 999875
No 236
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.63 E-value=1.2e-05 Score=81.80 Aligned_cols=86 Identities=16% Similarity=0.246 Sum_probs=50.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++||||||+++.|++||+.|.+..... .....+.......+. .. ..-..+..+.-.|.+.+|++|
T Consensus 171 e~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~l~~~p~~R 245 (265)
T cd05579 171 EVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---EIFQNILNGKIEWPE-DV-EVSDEAIDLISKLLVPDPEKR 245 (265)
T ss_pred HHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCcCCCc-cc-cCCHHHHHHHHHHhcCCHhhc
Confidence 4444445678999999999999999999995411100 000000100110000 00 001234566778999999999
Q ss_pred CChHHHHHHHH
Q 003931 751 PSMRFVAQELS 761 (785)
Q Consensus 751 p~m~~vv~~l~ 761 (785)
|++.+|.+.|.
T Consensus 246 pt~~~~~~~l~ 256 (265)
T cd05579 246 LGAKSIEEIKN 256 (265)
T ss_pred CCCccHHHHhc
Confidence 99977776664
No 237
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.63 E-value=1.8e-05 Score=80.14 Aligned_cols=83 Identities=16% Similarity=0.244 Sum_probs=49.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+..+...+.++||||||+++.|+++|+.|.+-..- .....++........... .-..+.++...|+..+|++|
T Consensus 171 e~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~l~~~p~~R 244 (256)
T cd08221 171 ELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---LNLVVKIVQGNYTPVVSV---YSSELISLVHSLLQQDPEKR 244 (256)
T ss_pred hhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHcCCCCCCccc---cCHHHHHHHHHHcccCcccC
Confidence 444445567899999999999999999998531000 000011111111100001 11224456678999999999
Q ss_pred CChHHHHHH
Q 003931 751 PSMRFVAQE 759 (785)
Q Consensus 751 p~m~~vv~~ 759 (785)
|++.|+++.
T Consensus 245 ~s~~~ll~~ 253 (256)
T cd08221 245 PTADEVLDQ 253 (256)
T ss_pred CCHHHHhhC
Confidence 999999764
No 238
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=97.62 E-value=2.3e-05 Score=79.45 Aligned_cols=82 Identities=21% Similarity=0.162 Sum_probs=49.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|.+-............-..+.... ..-..+.++.-.|+..+|++|
T Consensus 175 e~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~R 248 (260)
T cd08222 175 EALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPE------TYSRQLNSIMQSMLNKDPSLR 248 (260)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcc------hhcHHHHHHHHHHhcCChhhC
Confidence 44334456778999999999999999999854100000000000001111111 111234556778999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|++.|+.+
T Consensus 249 p~~~~il~ 256 (260)
T cd08222 249 PSAAEILR 256 (260)
T ss_pred cCHHHHhh
Confidence 99999864
No 239
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.62 E-value=1.8e-05 Score=81.47 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=21.8
Q ss_pred cccccceeeeehhhhhhhhCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
.+.++|||||||+++|++||+.|.
T Consensus 178 ~~~~~Dv~slG~il~~l~tg~~p~ 201 (284)
T cd07860 178 YSTAVDIWSLGCIFAEMVTRRALF 201 (284)
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCC
Confidence 467899999999999999999884
No 240
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.62 E-value=5.1e-05 Score=80.10 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=26.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
|+-.....+.++|||||||+++|++||+.|.+
T Consensus 172 E~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 172 ERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 44444567789999999999999999999964
No 241
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.61 E-value=1.6e-05 Score=81.72 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=48.2
Q ss_pred ccccccceeeeehhhhhhhhCCCCCch----------hhhccC--ccccccccc------CCCCCC-Cch----hHHHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG--ELFLKDVLD------QRLPPP-TGQ----LAEAVV 733 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~--~~~~~~~~d------~~l~~~-~~~----~~~~~~ 733 (785)
..+.|+|||||||++.|++||+.|..- .+.+.. .....+..+ ...... ... ....-.
T Consensus 175 ~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (283)
T cd05118 175 GYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASP 254 (283)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCH
Confidence 568899999999999999999987420 011000 000000000 000000 000 001123
Q ss_pred HHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 734 LTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 734 ~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.+.++...|.+.+|.+||+|.+++.
T Consensus 255 ~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 255 QALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHHhccCcccCcCHHHHhh
Confidence 4668889999999999999999874
No 242
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.60 E-value=2.1e-05 Score=82.92 Aligned_cols=79 Identities=22% Similarity=0.361 Sum_probs=46.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC-cc----cc-cccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-EL----FL-KDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~----~~-~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
+|+-.+...+.++|||||||++.|++||+.|.+....... .. .. ..+......-+. . ....+..+.-.|.
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-~---~~~~~~~ll~~~L 240 (329)
T cd05618 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-S---LSVKAASVLKSFL 240 (329)
T ss_pred HHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC-C---CCHHHHHHHHHHh
Confidence 3555555677899999999999999999999642111000 00 00 011111111111 0 1122446677899
Q ss_pred CCCCCCCCC
Q 003931 744 STTPDTRPS 752 (785)
Q Consensus 744 ~~~p~~Rp~ 752 (785)
+.+|++||+
T Consensus 241 ~~dP~~R~~ 249 (329)
T cd05618 241 NKDPKERLG 249 (329)
T ss_pred cCCHHHcCC
Confidence 999999998
No 243
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.60 E-value=2.2e-05 Score=80.90 Aligned_cols=79 Identities=23% Similarity=0.280 Sum_probs=47.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.++|||||||++.|++||+.|.+-..+.........+.+......... .-..+..+...|.+.+|++||++.++
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rp~~~~l 259 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG---YSDDAQDFVAKCLNKIPNRRPTYAQL 259 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc---cCHHHHHHHHHHcccCcccCCCHHHH
Confidence 357899999999999999999999531111000000111111111000001 11223456678999999999999998
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
+.
T Consensus 260 ~~ 261 (286)
T cd06622 260 LE 261 (286)
T ss_pred hc
Confidence 76
No 244
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.60 E-value=1.4e-05 Score=82.47 Aligned_cols=82 Identities=16% Similarity=0.149 Sum_probs=48.2
Q ss_pred ccccccceeeeehhhhhhhhCCCCCch----------hhhccC--ccccccccc----CCCC--CCCchh-H----H-HH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG--ELFLKDVLD----QRLP--PPTGQL-A----E-AV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~--~~~~~~~~d----~~l~--~~~~~~-~----~-~~ 732 (785)
..+.++||||||+++.|++||+.|.+- ...... .....+..+ .... ...... . . +-
T Consensus 178 ~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T cd07840 178 RYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLID 257 (287)
T ss_pred cCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCC
Confidence 356899999999999999999988531 111000 000000000 0000 000000 0 0 12
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
..+.++...|...+|++||++.+|++
T Consensus 258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 258 PSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 35678899999999999999999874
No 245
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.59 E-value=3.5e-05 Score=79.74 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=47.9
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc-cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCh
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL-DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSM 753 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m 753 (785)
....+.++|||||||++.|++||+.|.+-..-... ...+. .+..... .....-..+.++...|.+.+|++||++
T Consensus 189 ~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~ 263 (293)
T cd06647 189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPELQ--NPEKLSAIFRDFLNRCLEMDVEKRGSA 263 (293)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh---eeehhcCCCCCCC--CccccCHHHHHHHHHHccCChhhCcCH
Confidence 34567899999999999999999999641110000 00000 0000000 000001123456778999999999999
Q ss_pred HHHHHH
Q 003931 754 RFVAQE 759 (785)
Q Consensus 754 ~~vv~~ 759 (785)
.+++..
T Consensus 264 ~~il~h 269 (293)
T cd06647 264 KELLQH 269 (293)
T ss_pred HHHhcC
Confidence 999764
No 246
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.58 E-value=0.00035 Score=72.74 Aligned_cols=55 Identities=16% Similarity=0.065 Sum_probs=26.7
Q ss_pred CCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCC
Q 003931 27 SLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLN 87 (785)
Q Consensus 27 ~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n 87 (785)
.+++++.|++++|.++.++ .+ -.+|++|.+++|.--...|..+ .++|++|++++|
T Consensus 50 ~~~~l~~L~Is~c~L~sLP--~L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 50 EARASGRLYIKDCDIESLP--VL--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred HhcCCCEEEeCCCCCcccC--CC--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 3556666666666555543 11 1246666665543223333333 135555555555
No 247
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.58 E-value=1.7e-05 Score=82.83 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=46.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc---hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE---LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+......+.++|||||||++.|++||+.|.. ...... .+.......+. ....+ +.++...|.+.+|
T Consensus 163 E~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~------~~~~~~~~~~~-~~~~~---~~~li~~~L~~dp 232 (312)
T cd05585 163 ELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYR------KILQEPLRFPD-GFDRD---AKDLLIGLLSRDP 232 (312)
T ss_pred HHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHH------HHHcCCCCCCC-cCCHH---HHHHHHHHcCCCH
Confidence 44445567889999999999999999999953 111110 11111110000 11112 3355678999999
Q ss_pred CCCCChHHHHHHH
Q 003931 748 DTRPSMRFVAQEL 760 (785)
Q Consensus 748 ~~Rp~m~~vv~~l 760 (785)
++||+..++.+.+
T Consensus 233 ~~R~~~~~~~e~l 245 (312)
T cd05585 233 TRRLGYNGAQEIK 245 (312)
T ss_pred HHcCCCCCHHHHH
Confidence 9998754443333
No 248
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.58 E-value=2.2e-05 Score=82.29 Aligned_cols=88 Identities=14% Similarity=0.183 Sum_probs=54.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||+++|+++|+.|..-... .....++.+.....+... ..-..+.++.-.|++.+|++
T Consensus 201 PE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~ 275 (316)
T cd05574 201 PEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR---DETFSNILKKEVTFPGSP--PVSSSARDLIRKLLVKDPSK 275 (316)
T ss_pred HHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch---HHHHHHHhcCCccCCCcc--ccCHHHHHHHHHHccCCHhH
Confidence 4555566678999999999999999999999531111 111112222221111000 01123556778899999999
Q ss_pred CCChHHHHHHHHh
Q 003931 750 RPSMRFVAQELSA 762 (785)
Q Consensus 750 Rp~m~~vv~~l~~ 762 (785)
||++..+++++..
T Consensus 276 R~s~~~~~~~ll~ 288 (316)
T cd05574 276 RLGSKRGAAEIKQ 288 (316)
T ss_pred CCCchhhHHHHHc
Confidence 9996666655544
No 249
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.57 E-value=5.6e-05 Score=77.94 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=26.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-.....+.++|||||||++.|++||+.|.
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~el~~g~~pf 201 (287)
T cd07848 170 PELLLGAPYGKAVDMWSVGCILGELSDGQPLF 201 (287)
T ss_pred cHHHcCCCCCCchhHHhHHHHHHHHHhCCCCC
Confidence 34444556788999999999999999999885
No 250
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.57 E-value=2.1e-05 Score=80.31 Aligned_cols=78 Identities=22% Similarity=0.282 Sum_probs=44.9
Q ss_pred cccccccceeeeehhhhhhhh-CCCCCchh------hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMM-GRHPGELI------TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLEllt-gk~p~~~~------~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
...+.++|||||||+++|++| |+.|..-. ..+... ......++.+.... .... .++...|. .+|+
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~---~~~~~~~~-~dp~ 255 (269)
T cd05042 184 KDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE-QDIKLPKPQLDLKY---SDRW---YEVMQFCW-LDPE 255 (269)
T ss_pred cccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc-cCccCCCCcccccC---CHHH---HHHHHHHh-cCcc
Confidence 355789999999999999999 67674210 110000 01112222221111 1112 23344565 4999
Q ss_pred CCCChHHHHHHHH
Q 003931 749 TRPSMRFVAQELS 761 (785)
Q Consensus 749 ~Rp~m~~vv~~l~ 761 (785)
+||++.||.+.|.
T Consensus 256 ~Rpt~~~v~~~l~ 268 (269)
T cd05042 256 TRPTAEEVHELLT 268 (269)
T ss_pred cccCHHHHHHHhc
Confidence 9999999998873
No 251
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.56 E-value=2.5e-05 Score=80.49 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=49.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhcc-CcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLS-GELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-.....+.++|||||||++.|++||+.|.+-..... .+.....+.+...... .... ..+..+.-.|.+.+|+
T Consensus 170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~s---~~~~~li~~~l~~~P~ 245 (285)
T cd05631 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYS-EKFS---EDAKSICRMLLTKNPK 245 (285)
T ss_pred HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCC-ccCC---HHHHHHHHHHhhcCHH
Confidence 354455667899999999999999999999953110000 0000000111111000 0111 1244667789999999
Q ss_pred CCCC-----hHHHHH
Q 003931 749 TRPS-----MRFVAQ 758 (785)
Q Consensus 749 ~Rp~-----m~~vv~ 758 (785)
+||+ +.++.+
T Consensus 246 ~R~~~~~~~~~~~~~ 260 (285)
T cd05631 246 ERLGCRGNGAAGVKQ 260 (285)
T ss_pred HhcCCCCCCHHHHhc
Confidence 9997 677654
No 252
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.56 E-value=2e-05 Score=90.87 Aligned_cols=86 Identities=21% Similarity=0.299 Sum_probs=52.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+..+...+.++|||||||+++|++||+.|.+-... ......+++..+..+.. ....-..+.++...|...+|++
T Consensus 549 PE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~---~~~~~~il~~~~~~p~~-~~~~~~~~~~~l~~lL~~dP~~ 624 (669)
T cd05610 549 PELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETP---QQVFQNILNRDIPWPEG-EEKLSVNAQNAIEILLTMDPTK 624 (669)
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCCCCCcc-cccCCHHHHHHHHHHcccChhH
Confidence 4555566678999999999999999999999531100 01111222222211100 0011122344556689999999
Q ss_pred CCChHHHHHH
Q 003931 750 RPSMRFVAQE 759 (785)
Q Consensus 750 Rp~m~~vv~~ 759 (785)
||+|.||++.
T Consensus 625 R~ta~e~l~h 634 (669)
T cd05610 625 RAGLKELKQH 634 (669)
T ss_pred CcCHHHHHhC
Confidence 9999999774
No 253
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.56 E-value=3.4e-05 Score=82.29 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=26.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-.....+.++|||||||++.||+||+.|.
T Consensus 187 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf 218 (355)
T cd07874 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218 (355)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 35444556788999999999999999999885
No 254
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.56 E-value=1.6e-05 Score=88.31 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=50.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.||+||+.|.+-... ......+............ -..+.++...|.+.+|++
T Consensus 240 PE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~---s~~~~~li~~~L~~dP~~ 313 (478)
T PTZ00267 240 PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---REIMQQVLYGKYDPFPCPV---SSGMKALLDPLLSKNPAL 313 (478)
T ss_pred HhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCCccC---CHHHHHHHHHHhccChhh
Confidence 3554556778999999999999999999999531100 0000111111110000011 122446677899999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||++.+++.
T Consensus 314 Rps~~~~l~ 322 (478)
T PTZ00267 314 RPTTQQLLH 322 (478)
T ss_pred CcCHHHHHh
Confidence 999999864
No 255
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.54 E-value=6e-05 Score=79.64 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=49.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhh---ccCcccccccc-cCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITS---LSGELFLKDVL-DQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~---~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
+|+......+.++|||||||++.||+||+.|.+-... ...-....+.+ .+..........+++. ++...|...
T Consensus 167 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~---~li~~~l~~ 243 (333)
T cd05600 167 PEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW---DLITKLIND 243 (333)
T ss_pred hhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH---HHHHHHhhC
Confidence 3555555778999999999999999999999541100 00000000111 1111000001112233 444568889
Q ss_pred CCCCCCChHHHHHH
Q 003931 746 TPDTRPSMRFVAQE 759 (785)
Q Consensus 746 ~p~~Rp~m~~vv~~ 759 (785)
.|++||++.+|.+.
T Consensus 244 ~~~rr~s~~~ll~h 257 (333)
T cd05600 244 PSRRFGSLEDIKNH 257 (333)
T ss_pred hhhhcCCHHHHHhC
Confidence 99999999999753
No 256
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.54 E-value=3.4e-05 Score=77.84 Aligned_cols=82 Identities=16% Similarity=0.310 Sum_probs=49.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++||||+|+++.|++||+.|.+-...............+.... .. ...+..+...|...+|++|
T Consensus 169 e~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~i~~~l~~~p~~R 242 (254)
T cd06627 169 EVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPE---GI---SPELKDFLMQCFQKDPNLR 242 (254)
T ss_pred hhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCC---CC---CHHHHHHHHHHHhCChhhC
Confidence 44444456789999999999999999999854111100000000000011111 11 1233466788999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|+|.||+.
T Consensus 243 ~~~~~~l~ 250 (254)
T cd06627 243 PTAKQLLK 250 (254)
T ss_pred cCHHHHhc
Confidence 99999863
No 257
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.54 E-value=3e-05 Score=81.15 Aligned_cols=81 Identities=17% Similarity=0.216 Sum_probs=47.1
Q ss_pred cccccceeeeehhhhhhhhCCCCCch-------hhhccCc--------------ccccc----cccCCCCCCC--chhHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGEL-------ITSLSGE--------------LFLKD----VLDQRLPPPT--GQLAE 730 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~-------~~~~~~~--------------~~~~~----~~d~~l~~~~--~~~~~ 730 (785)
.+.++|||||||++.|++||+.|... .+..... ....+ ..++...... .....
T Consensus 187 ~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
T cd08216 187 YNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRT 266 (314)
T ss_pred CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhH
Confidence 56789999999999999999999541 1111000 00000 1111110000 00000
Q ss_pred HHHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 731 AVVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 731 ~~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.-....++...|...+|++||++.++++
T Consensus 267 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 267 FSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 1123556788899999999999999876
No 258
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=97.53 E-value=5.7e-05 Score=80.61 Aligned_cols=86 Identities=20% Similarity=0.345 Sum_probs=56.4
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCc-cc-------ccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGE-LF-------LKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~-~~-------~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
..+.++|||||||++-|+++.+.|.+........ +. ....+-|.+.. ..+....++.++-.|+.+.|+
T Consensus 134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~----~~e~~~~l~~l~~~cw~e~P~ 209 (484)
T KOG1023|consen 134 ALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL----LNELPPELLLLVARCWEEIPE 209 (484)
T ss_pred cccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhh----hhhcchHHHHHHHHhcccChh
Confidence 4688999999999999999999996521111110 00 11122222211 011222577888999999999
Q ss_pred CCCChHHHHHHHHhcccc
Q 003931 749 TRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 749 ~Rp~m~~vv~~l~~~~~~ 766 (785)
+||+|..|-..+..+...
T Consensus 210 ~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 210 KRPSIEQIRSKLLTINKG 227 (484)
T ss_pred hCccHHHHHhhhhhhccc
Confidence 999999998887766543
No 259
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.53 E-value=2.3e-05 Score=79.31 Aligned_cols=73 Identities=21% Similarity=0.331 Sum_probs=45.0
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhh---hccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELIT---SLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
.+.++|||||||++.|++||+.|.+-.. .+.......+. +.+.. ... ..+.++...|.+.+|.+||+|.
T Consensus 179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~---~~~---~~~~~li~~~l~~~p~~Rp~~~ 250 (258)
T cd06632 179 YGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL--PPIPD---HLS---DEAKDFILKCLQRDPSLRPTAA 250 (258)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC--CCcCC---CcC---HHHHHHHHHHhhcCcccCcCHH
Confidence 6789999999999999999999954111 00000000000 01110 111 1233456789999999999999
Q ss_pred HHHH
Q 003931 755 FVAQ 758 (785)
Q Consensus 755 ~vv~ 758 (785)
++++
T Consensus 251 ~~l~ 254 (258)
T cd06632 251 ELLE 254 (258)
T ss_pred HHhc
Confidence 9864
No 260
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=97.53 E-value=2.1e-05 Score=80.93 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=48.2
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhh----------ccC--ccc---cccc--ccCCCCCCCchhH-----HHHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITS----------LSG--ELF---LKDV--LDQRLPPPTGQLA-----EAVVL 734 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~----------~~~--~~~---~~~~--~d~~l~~~~~~~~-----~~~~~ 734 (785)
..+.++|||||||+++|++||+.|.....+ ... +.. ..+. .+........... ..-..
T Consensus 175 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (282)
T cd07829 175 HYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPE 254 (282)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHH
Confidence 667899999999999999999887531110 000 000 0000 1111110000000 00124
Q ss_pred HHHHHhhcCCCCCCCCCChHHHHH
Q 003931 735 TINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 735 ~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
+.++...|.+.+|++||++.+|+.
T Consensus 255 ~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 255 GIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHhhccCcccCCCHHHHhh
Confidence 678889999999999999999864
No 261
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.53 E-value=7.1e-05 Score=51.32 Aligned_cols=35 Identities=40% Similarity=0.617 Sum_probs=13.8
Q ss_pred CcEEECcCccccccCChhccCCCCCCEEECcCCccc
Q 003931 273 LQYLFLYRNNFSGPIPSEIEKLTSLENLDLSGNQLS 308 (785)
Q Consensus 273 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 308 (785)
|++|++++|+++. +|..++++++|+.|++++|+++
T Consensus 3 L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 4444444444442 2333444444444444444443
No 262
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.52 E-value=4.5e-05 Score=78.68 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=49.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc----------hhhhccC---ccccc------ccccCCCCCCCchh-HH
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG---ELFLK------DVLDQRLPPPTGQL-AE 730 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~---~~~~~------~~~d~~l~~~~~~~-~~ 730 (785)
|+......+.++|||||||++.|++||+.|.. +..++.. ..+.. ..+.+......... .+
T Consensus 177 E~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (288)
T cd07863 177 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPE 256 (288)
T ss_pred hHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcC
Confidence 44445567889999999999999999998742 1111100 00000 01111110000000 00
Q ss_pred HHHHHHHHHhhcCCCCCCCCCChHHHH
Q 003931 731 AVVLTINVALACTSTTPDTRPSMRFVA 757 (785)
Q Consensus 731 ~~~~~~~ial~C~~~~p~~Rp~m~~vv 757 (785)
.-..+.++...|.+.+|++||++.|+.
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 257 IEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 012245677899999999999999886
No 263
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.52 E-value=2.5e-05 Score=80.23 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=46.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhh-ccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITS-LSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+......+.++|||||||++.|++||+.|...... .........+.......+. . .-..+.++.-.|.+.+|+
T Consensus 166 PE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~li~~~l~~~P~ 241 (280)
T cd05608 166 PELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPD-K---FSPASKSFCEALLAKDPE 241 (280)
T ss_pred HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcc-c---CCHHHHHHHHHHhcCCHH
Confidence 4555556678899999999999999999999531110 0000001111111111000 0 112244666789999999
Q ss_pred CCCCh
Q 003931 749 TRPSM 753 (785)
Q Consensus 749 ~Rp~m 753 (785)
+||+.
T Consensus 242 ~R~~~ 246 (280)
T cd05608 242 KRLGF 246 (280)
T ss_pred HhcCC
Confidence 99944
No 264
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.52 E-value=4e-05 Score=80.12 Aligned_cols=83 Identities=16% Similarity=0.067 Sum_probs=47.7
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc----------hhhhccC-c-------ccccccccCCCCCC-CchhHH----HH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG-E-------LFLKDVLDQRLPPP-TGQLAE----AV 732 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~-~-------~~~~~~~d~~l~~~-~~~~~~----~~ 732 (785)
...+.++|||||||++.|++||+.|.+ +...... . .......+...... .....+ ..
T Consensus 202 ~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (311)
T cd07866 202 RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLG 281 (311)
T ss_pred CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCC
Confidence 346789999999999999999998843 0000000 0 00011111000000 000000 11
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
..+.++...|.+.+|++||++.||+.
T Consensus 282 ~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 282 PEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hhHHHHHHHHcccCcccCcCHHHHhc
Confidence 34567888999999999999999863
No 265
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.52 E-value=6.1e-05 Score=82.44 Aligned_cols=78 Identities=29% Similarity=0.446 Sum_probs=57.7
Q ss_pred hhcccccccceeeeehhhhhhhh-CCCCCc------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMM-GRHPGE------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLEllt-gk~p~~------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
.-...|.++|||||||-..|++| |.+|.+ +...++..+ +|..+ ..|-..|..+.+.|+..+
T Consensus 873 ~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge--------RLsqP----piCtiDVy~~mvkCwmid 940 (1177)
T KOG1025|consen 873 RIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE--------RLSQP----PICTIDVYMVMVKCWMID 940 (1177)
T ss_pred hccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc--------cCCCC----CCccHHHHHHHHHHhccC
Confidence 44678999999999999999998 888864 222221111 23222 235667788899999999
Q ss_pred CCCCCChHHHHHHHHhc
Q 003931 747 PDTRPSMRFVAQELSAK 763 (785)
Q Consensus 747 p~~Rp~m~~vv~~l~~~ 763 (785)
+..||+.++.+.++.+.
T Consensus 941 ~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 941 ADSRPTFKELAEEFSRM 957 (1177)
T ss_pred cccCccHHHHHHHHHHH
Confidence 99999999999888654
No 266
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.51 E-value=2.1e-05 Score=81.14 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=49.6
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccC-ccccccccc--CCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSG-ELFLKDVLD--QRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~~~~~~~d--~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
.+.++||||||+++.|++||+.|.....+... ......+.. +.... .. -..+.++...|.+.+|++||+++
T Consensus 185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~l~~li~~~l~~~p~~R~t~~ 258 (288)
T cd05583 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPK---TM---SAEARDFIQKLLEKDPKKRLGAN 258 (288)
T ss_pred CcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCc---cc---CHHHHHHHHHHhcCCHhhccCcc
Confidence 57899999999999999999999531111000 000011111 11111 01 11234566789999999999999
Q ss_pred HHHHHHHhc
Q 003931 755 FVAQELSAK 763 (785)
Q Consensus 755 ~vv~~l~~~ 763 (785)
+|.+.|...
T Consensus 259 ~~~~~l~~~ 267 (288)
T cd05583 259 GADEIKNHP 267 (288)
T ss_pred hHHHHhcCc
Confidence 998877653
No 267
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.51 E-value=2.4e-05 Score=81.83 Aligned_cols=78 Identities=17% Similarity=0.216 Sum_probs=46.2
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
...+.++|||||||++.|++||+.|..-...............+..... ... ..+.++.-.|.+.+|.+||+|.+
T Consensus 195 ~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~l~~li~~~l~~~P~~Rp~~~~ 269 (313)
T cd06633 195 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSN--EWT---DSFRGFVDYCLQKIPQERPASAE 269 (313)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCcc--ccC---HHHHHHHHHHccCChhhCcCHHH
Confidence 3467789999999999999999999531110000000000000111000 000 12345667899999999999999
Q ss_pred HHH
Q 003931 756 VAQ 758 (785)
Q Consensus 756 vv~ 758 (785)
|++
T Consensus 270 ~l~ 272 (313)
T cd06633 270 LLR 272 (313)
T ss_pred Hhc
Confidence 875
No 268
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.51 E-value=5.8e-05 Score=85.51 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=47.4
Q ss_pred CCCCcEEEccCCCCcc-cCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcc-cCCccccCCCCCc
Q 003931 52 MPSLTHLGLYLNELTL-EFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQG-KLSPNVSKLSNLI 129 (785)
Q Consensus 52 l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~ 129 (785)
+|+|++|.+++-.+.. ........+++|..||+|+++++. + ..+ +++++|++|.+.+=.+.. ..-..+.+|++|+
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~n-l-~GI-S~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~ 223 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISN-L-SGI-SRLKNLQVLSMRNLEFESYQDLIDLFNLKKLR 223 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccC-c-HHH-hccccHHHHhccCCCCCchhhHHHHhcccCCC
Confidence 4444444444433221 112223344455555555554441 2 222 445555555444433331 1122344455555
Q ss_pred EEEcCCCcccccC------CcCCCCCCCCCEEEcccCcccc
Q 003931 130 DLRLATNKFSGPI------PGDIGSMSNLQLVELFNNSFTG 164 (785)
Q Consensus 130 ~L~L~~n~~~~~~------~~~l~~l~~L~~L~L~~n~~~~ 164 (785)
.||+|..+..... -+--..+++|+.||.+++.+..
T Consensus 224 vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 224 VLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred eeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 5555544332111 0011236677777777665553
No 269
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.51 E-value=3.2e-05 Score=80.91 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=56.1
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCc-hh-hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGE-LI-TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~-~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
.+++..|+||||.|++|.+|+-||.|.. +. .|. ++..+.||...-+..+. -+-.++++++-.|.+.+|.+||+
T Consensus 546 k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a----Kl~aI~~P~~~Iefp~~-~~~~~li~~mK~CL~rdPkkR~s 620 (677)
T KOG0596|consen 546 KIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA----KLHAITDPNHEIEFPDI-PENDELIDVMKCCLARDPKKRWS 620 (677)
T ss_pred ceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH----HHHhhcCCCccccccCC-CCchHHHHHHHHHHhcCcccCCC
Confidence 5689999999999999999999999954 22 222 34566677442111111 01122677888999999999999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
.-|+++
T Consensus 621 i~eLLq 626 (677)
T KOG0596|consen 621 IPELLQ 626 (677)
T ss_pred cHHHhc
Confidence 998864
No 270
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.51 E-value=4.8e-05 Score=78.36 Aligned_cols=82 Identities=15% Similarity=0.190 Sum_probs=47.4
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc----------hhhhccC-ccccccccc----------CCCCCCCchhHHH---
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG-ELFLKDVLD----------QRLPPPTGQLAEA--- 731 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~-~~~~~~~~d----------~~l~~~~~~~~~~--- 731 (785)
...+.|+|||||||++.|++||+.|.. +...... .....++.+ +..... ......
T Consensus 176 ~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 254 (286)
T cd07847 176 TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETR-EPLESKFPN 254 (286)
T ss_pred CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccc-cCHHHHhcc
Confidence 346789999999999999999998842 0100000 000001111 110000 000000
Q ss_pred -HHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 732 -VVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 732 -~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
-..+.++...|.+.+|++||++.|++.
T Consensus 255 ~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 255 ISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 123557788999999999999998864
No 271
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.50 E-value=3.7e-05 Score=79.12 Aligned_cols=75 Identities=24% Similarity=0.326 Sum_probs=46.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc---cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCh
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL---DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSM 753 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m 753 (785)
..+.++||||||+++.|++||+.|.+- +.........+. .+.+... ... ..+.++...|...+|++||++
T Consensus 183 ~~~~~~Di~slG~~l~~l~~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~---~~l~~li~~~l~~~p~~Rp~~ 255 (283)
T cd06617 183 GYDVKSDVWSLGITMIELATGRFPYDS--WKTPFQQLKQVVEEPSPQLPAE--KFS---PEFQDFVNKCLKKNYKERPNY 255 (283)
T ss_pred ccCccccchhhHHHHHHHHhCCCCCCc--cccCHHHHHHHHhcCCCCCCcc--ccC---HHHHHHHHHHccCChhhCcCH
Confidence 346799999999999999999999631 100000111111 1111110 001 124456778999999999999
Q ss_pred HHHHH
Q 003931 754 RFVAQ 758 (785)
Q Consensus 754 ~~vv~ 758 (785)
.+|.+
T Consensus 256 ~~il~ 260 (283)
T cd06617 256 PELLQ 260 (283)
T ss_pred HHHhc
Confidence 99865
No 272
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.49 E-value=2.7e-05 Score=80.50 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=48.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|.........-....+...+...... .. -..+..+.-.|.+.+|.+|
T Consensus 186 E~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~l~~li~~~l~~~P~~R 261 (292)
T cd06657 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLH-KV---SPSLKGFLDRLLVRDPAQR 261 (292)
T ss_pred HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcc-cC---CHHHHHHHHHHHhCCcccC
Confidence 4444456678999999999999999999985310000000000001111111000 00 0123345668999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|++.||.+
T Consensus 262 ~~~~~ll~ 269 (292)
T cd06657 262 ATAAELLK 269 (292)
T ss_pred cCHHHHhc
Confidence 99999876
No 273
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.49 E-value=2.1e-05 Score=79.77 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=48.5
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
....+.++|||||||++.|++||+.|....... .....+...............-..+.++.-.|.+.+|++||++.
T Consensus 167 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 243 (260)
T cd05611 167 GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD---AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGAN 243 (260)
T ss_pred CCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCC
Confidence 344678999999999999999999996411000 00000000000000000000112355778899999999999987
Q ss_pred HHHHHHH
Q 003931 755 FVAQELS 761 (785)
Q Consensus 755 ~vv~~l~ 761 (785)
++.+.+.
T Consensus 244 ~~~~~l~ 250 (260)
T cd05611 244 GYQEIKS 250 (260)
T ss_pred cHHHHHc
Confidence 7655543
No 274
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.47 E-value=5.5e-05 Score=77.09 Aligned_cols=77 Identities=21% Similarity=0.334 Sum_probs=47.4
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCchhhhccCccccccc----ccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDV----LDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~----~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
....+.++||||+|+++.|++||+.|.+............++ ..+... ...-..+.++...|...+|++|
T Consensus 182 ~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~l~~~p~~R 255 (268)
T cd06630 182 GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIP------EHLSPGLRDVTLRCLELQPEDR 255 (268)
T ss_pred cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCc------hhhCHHHHHHHHHHcCCCcccC
Confidence 345578999999999999999999985311110000000000 011110 0111234567789999999999
Q ss_pred CChHHHH
Q 003931 751 PSMRFVA 757 (785)
Q Consensus 751 p~m~~vv 757 (785)
|++.|++
T Consensus 256 ~~~~~ll 262 (268)
T cd06630 256 PPSRELL 262 (268)
T ss_pred cCHHHHh
Confidence 9999986
No 275
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.46 E-value=9.2e-05 Score=75.41 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=45.6
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchh---hhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELI---TSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
..++.++|||||||+++|++||+.|..-. ..+... .......+...... ...+ .+.++...|.+.+|++||+
T Consensus 184 ~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~---~~~~li~~~l~~~P~~R~~ 258 (267)
T cd06645 184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM-TKSNFQPPKLKDKM-KWSN---SFHHFVKMALTKNPKKRPT 258 (267)
T ss_pred CCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh-hccCCCCCcccccC-CCCH---HHHHHHHHHccCCchhCcC
Confidence 34678999999999999999999984200 000000 00000001110000 0001 2346677899999999999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
+.+|++
T Consensus 259 ~~~ll~ 264 (267)
T cd06645 259 AEKLLQ 264 (267)
T ss_pred HHHHhc
Confidence 998864
No 276
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.46 E-value=5.4e-05 Score=78.28 Aligned_cols=25 Identities=16% Similarity=0.365 Sum_probs=22.3
Q ss_pred cccccceeeeehhhhhhhhCCCCCc
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
.+.++|||||||++.|++||+.|.+
T Consensus 181 ~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 181 YSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 5678999999999999999999853
No 277
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.46 E-value=3.6e-05 Score=81.45 Aligned_cols=88 Identities=18% Similarity=0.210 Sum_probs=50.4
Q ss_pred ccccccceeeeehhhhhhhhCCCCCch----------hhhccC--c--------ccccccccCCCCCCCchhH----HHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG--E--------LFLKDVLDQRLPPPTGQLA----EAV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~--~--------~~~~~~~d~~l~~~~~~~~----~~~ 732 (785)
..+.++|||||||++.|++||+.|..- ..+... . ....++++........... ..-
T Consensus 189 ~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (337)
T cd07852 189 RYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKAS 268 (337)
T ss_pred cccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCC
Confidence 457889999999999999999988530 000000 0 0000111100000000000 011
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHHH--HHhcc
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQE--LSAKT 764 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~~--l~~~~ 764 (785)
..+.++...|.+.+|++||+|.+|++. +....
T Consensus 269 ~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 269 DDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 235677889999999999999999864 44443
No 278
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.45 E-value=3.7e-05 Score=80.52 Aligned_cols=78 Identities=17% Similarity=0.281 Sum_probs=46.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc--cCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL--DQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+-.....+.++|||||||++.|++||+.|..-... ......+. .+.+.. ....+ +.++.-.|.+.+|+
T Consensus 166 E~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~~~i~~~~~~~~~---~~~~~---~~~ll~~~l~~~P~ 236 (316)
T cd05592 166 EILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELFDSILNDRPHFPR---WISKE---AKDCLSKLFERDPT 236 (316)
T ss_pred HHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCCCCCC---CCCHH---HHHHHHHHccCCHH
Confidence 444445678899999999999999999999531100 00000000 011111 01112 23455689999999
Q ss_pred CCCChHHHH
Q 003931 749 TRPSMRFVA 757 (785)
Q Consensus 749 ~Rp~m~~vv 757 (785)
+||++.+.+
T Consensus 237 ~R~~~~~~l 245 (316)
T cd05592 237 KRLGVDGDI 245 (316)
T ss_pred HcCCChHHH
Confidence 999986443
No 279
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.45 E-value=5e-05 Score=85.99 Aligned_cols=136 Identities=26% Similarity=0.290 Sum_probs=84.5
Q ss_pred CCccEEECCCCCC-cccCChhhhcCCCCCcEEECCCCCCccc-CCccccCCCCCcEEEcCCCcccccCCcCCCCCCCCCE
Q 003931 77 RNLTYLDLSLNKL-SGLIPERLFTNLGKLEYLNLTENQFQGK-LSPNVSKLSNLIDLRLATNKFSGPIPGDIGSMSNLQL 154 (785)
Q Consensus 77 ~~L~~L~Ls~n~i-~~~~~~~~f~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 154 (785)
.+|++|++++... ....|..+...+|.|+.|.+++-.+... ....+.++++|..||+|++.++.. ..++.+++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4677777777532 2233445556677777777776555422 123345677777888887777744 45677777777
Q ss_pred EEcccCcccc-cCCccccCCCCCCEEEcccCcCcccC------CccccCCcccCeeeccccccccCC
Q 003931 155 VELFNNSFTG-QIPSSLGQLKNLQHLDLRMNALNYTI------PPELGLCTNLSYLALAVNQLSGGL 214 (785)
Q Consensus 155 L~L~~n~~~~-~~~~~l~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~i~~~~ 214 (785)
|.+.+=.+.. ..-..+.++++|++||+|........ -+.-..+|+|+.|+.+++.+....
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~ 266 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEI 266 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHH
Confidence 7777655542 11234667888888888776543211 112234788999999988776544
No 280
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.44 E-value=6.6e-05 Score=75.90 Aligned_cols=82 Identities=27% Similarity=0.331 Sum_probs=49.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++||||||++++|+++|+.|.+-.... .................. -..+..+...|...+|++|
T Consensus 173 e~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~l~~~p~~R 246 (258)
T cd08215 173 ELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---ELALKILKGQYPPIPSQY---SSELRNLVSSLLQKDPEER 246 (258)
T ss_pred hHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HHHHHHhcCCCCCCCCCC---CHHHHHHHHHHcCCChhhC
Confidence 3334455788999999999999999999995411100 000001111110000011 1234567789999999999
Q ss_pred CChHHHHH
Q 003931 751 PSMRFVAQ 758 (785)
Q Consensus 751 p~m~~vv~ 758 (785)
|++.||++
T Consensus 247 p~~~~ll~ 254 (258)
T cd08215 247 PSIAQILQ 254 (258)
T ss_pred cCHHHHhc
Confidence 99999864
No 281
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.44 E-value=6.2e-05 Score=79.56 Aligned_cols=79 Identities=25% Similarity=0.347 Sum_probs=54.4
Q ss_pred ccccccceeeeehhhhhhhh-CCCCCchhhhccCcccccccc--cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCh
Q 003931 677 RVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVL--DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSM 753 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m 753 (785)
..+.|+|||+|||+|.||.| |-.|.-=+.- ..+-+.+ +.++.++ +.|--+|+++..+|+.-+|.+||+.
T Consensus 442 tFSiKSDVWAFGVLLWEIATYGMsPYPGidl----SqVY~LLEkgyRM~~P----eGCPpkVYeLMraCW~WsPsDRPsF 513 (1157)
T KOG4278|consen 442 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYGLLEKGYRMDGP----EGCPPKVYELMRACWNWSPSDRPSF 513 (1157)
T ss_pred ccccchhhHHHHHHHHHHHhcCCCCCCCccH----HHHHHHHhccccccCC----CCCCHHHHHHHHHHhcCCcccCccH
Confidence 45789999999999999998 6666320000 0011112 2233332 3466788999999999999999999
Q ss_pred HHHHHHHHhc
Q 003931 754 RFVAQELSAK 763 (785)
Q Consensus 754 ~~vv~~l~~~ 763 (785)
+|+-+.++.+
T Consensus 514 aeiHqafEtm 523 (1157)
T KOG4278|consen 514 AEIHQAFETM 523 (1157)
T ss_pred HHHHHHHHHH
Confidence 9988877643
No 282
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.43 E-value=2.5e-05 Score=82.15 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=48.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.||+||+.|..-... ......+....+....... ..+.++.-.|.+.+|++|
T Consensus 166 E~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~ll~~ll~~~p~~R 238 (325)
T cd05604 166 EVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---AEMYDNILHKPLVLRPGAS----LTAWSILEELLEKDRQRR 238 (325)
T ss_pred HHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---HHHHHHHHcCCccCCCCCC----HHHHHHHHHHhccCHHhc
Confidence 444455677899999999999999999999531000 0000111111111000011 123355677999999999
Q ss_pred CChHHHHHHH
Q 003931 751 PSMRFVAQEL 760 (785)
Q Consensus 751 p~m~~vv~~l 760 (785)
|++++.++++
T Consensus 239 ~~~~~~~~~i 248 (325)
T cd05604 239 LGAKEDFLEI 248 (325)
T ss_pred CCCCCCHHHH
Confidence 9987555444
No 283
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.43 E-value=5e-05 Score=79.12 Aligned_cols=85 Identities=11% Similarity=0.021 Sum_probs=51.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc---hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE---LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+-.....+.++|||||||+++|++||+.|.. ..+.... ........+.... . .-..+.++.-.|.+.+|
T Consensus 186 E~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~---~---~~~~~~~li~~~l~~~P 258 (305)
T cd05609 186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ-VISDDIEWPEGDE---A---LPADAQDLISRLLRQNP 258 (305)
T ss_pred hhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcccCCCCccc---c---CCHHHHHHHHHHhccCh
Confidence 33334557889999999999999999999852 0000000 0000111111110 0 01224577889999999
Q ss_pred CCCCChHHHHHHHHh
Q 003931 748 DTRPSMRFVAQELSA 762 (785)
Q Consensus 748 ~~Rp~m~~vv~~l~~ 762 (785)
++||++.++.+.+..
T Consensus 259 ~~R~~~~~~~~ll~~ 273 (305)
T cd05609 259 LERLGTGGAFEVKQH 273 (305)
T ss_pred hhccCccCHHHHHhC
Confidence 999998766666654
No 284
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.42 E-value=2.7e-05 Score=81.66 Aligned_cols=78 Identities=22% Similarity=0.234 Sum_probs=45.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||++.|++||+.|.+-.... .....+......-+. ..... +..+.-.|.+.+|++|
T Consensus 168 E~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~---~~~~~i~~~~~~~p~-~~~~~---~~~li~~~l~~~P~~R 240 (318)
T cd05582 168 EVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK---ETMTMILKAKLGMPQ-FLSPE---AQSLLRALFKRNPANR 240 (318)
T ss_pred HHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH---HHHHHHHcCCCCCCC-CCCHH---HHHHHHHHhhcCHhHc
Confidence 4444445678999999999999999999995411110 000111111111000 01112 2345568999999999
Q ss_pred CChHH
Q 003931 751 PSMRF 755 (785)
Q Consensus 751 p~m~~ 755 (785)
|++.+
T Consensus 241 ~~a~~ 245 (318)
T cd05582 241 LGAGP 245 (318)
T ss_pred CCCCC
Confidence 99655
No 285
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.40 E-value=4.7e-05 Score=80.00 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=47.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||++.||+||+.|.+-... ......+.......+. .... .+.++...|.+.+|++|
T Consensus 170 E~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---~~~~~~~~~~~~~~~~-~~~~---~~~~li~~~l~~~p~~R 242 (323)
T cd05584 170 EILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---KKTIDKILKGKLNLPP-YLTP---EARDLLKKLLKRNPSSR 242 (323)
T ss_pred hhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCCCCCC-CCCH---HHHHHHHHHcccCHhHc
Confidence 433344567899999999999999999999531110 0001111111111111 1111 23456678999999999
Q ss_pred C-----ChHHHHH
Q 003931 751 P-----SMRFVAQ 758 (785)
Q Consensus 751 p-----~m~~vv~ 758 (785)
| ++.++.+
T Consensus 243 ~~~~~~~~~~l~~ 255 (323)
T cd05584 243 LGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCCCHHHHhc
Confidence 9 6666543
No 286
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.39 E-value=4.3e-05 Score=79.47 Aligned_cols=82 Identities=12% Similarity=0.073 Sum_probs=46.9
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhh----------hccC--ccccccc--------ccCCCCCCC---chhHHHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELIT----------SLSG--ELFLKDV--------LDQRLPPPT---GQLAEAVV 733 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~----------~~~~--~~~~~~~--------~d~~l~~~~---~~~~~~~~ 733 (785)
..+.++|||||||+++|++||+.|.+... .+.. .....++ .|+.-.... ......-.
T Consensus 194 ~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (302)
T cd07864 194 RYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPT 273 (302)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCH
Confidence 35788999999999999999998864111 1100 0000111 011000000 00000012
Q ss_pred HHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 734 LTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 734 ~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.+.++.-.|...+|++||++.+|+.
T Consensus 274 ~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 274 PALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 3557778899999999999999864
No 287
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.39 E-value=3.6e-06 Score=84.80 Aligned_cols=295 Identities=19% Similarity=0.100 Sum_probs=161.3
Q ss_pred CCcEEEccCCCCCC-Cccccc-cCCCCCCEEeCCCCC-CCCCCcccc-CCCCCCcEEEccCCC-CcccCCc-cCCCCCCc
Q 003931 6 ELQYLSVYDNNLNG-AIPFQL-SSLRKVRYLDLGGNF-LETPDWSKF-SSMPSLTHLGLYLNE-LTLEFPS-FILTCRNL 79 (785)
Q Consensus 6 ~L~~L~L~~n~i~~-~~~~~~-~~l~~L~~L~L~~n~-i~~~~~~~f-~~l~~L~~L~L~~n~-i~~~~~~-~~~~l~~L 79 (785)
-|+.|++.++.=.+ ..-.+| .+++++++|++.++. +++.....+ ..|+.|++|++..|. ++...-. ....|++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 36777888775322 222233 678888888888875 333322223 357888888888743 4444333 34568888
Q ss_pred cEEECCCC-CCcccCChhhhcCCCCCcEEECCCCCCcccCCccc----cCCCCCcEEEcCCCcc-cccCC-cCCCCCCCC
Q 003931 80 TYLDLSLN-KLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNV----SKLSNLIDLRLATNKF-SGPIP-GDIGSMSNL 152 (785)
Q Consensus 80 ~~L~Ls~n-~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~----~~l~~L~~L~L~~n~~-~~~~~-~~l~~l~~L 152 (785)
.+|+++.| .|++.--..++.++..++.+.+.+|.= ...+.+ ..+..+..+++.++.. ++..- ..-..+..|
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e--~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~l 296 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLE--LELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHAL 296 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhccccc--ccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHh
Confidence 88888888 444432334556777777777765421 111222 2334455556555532 21110 011356778
Q ss_pred CEEEcccCcccccC-Ccc-ccCCCCCCEEEcccCcC-cccCCccc-cCCcccCeeecccccccc--CCchhccCCCCCCE
Q 003931 153 QLVELFNNSFTGQI-PSS-LGQLKNLQHLDLRMNAL-NYTIPPEL-GLCTNLSYLALAVNQLSG--GLPLSLSNLSKLND 226 (785)
Q Consensus 153 ~~L~L~~n~~~~~~-~~~-l~~l~~L~~L~l~~n~l-~~~~~~~~-~~l~~L~~L~l~~n~i~~--~~~~~l~~l~~L~~ 226 (785)
++|+.+++...+.. -.+ -.+..+|+.|.++.++- +..-...+ .+++.|+.+++..+.... .+...-.+++.|++
T Consensus 297 q~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~ 376 (483)
T KOG4341|consen 297 QVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRV 376 (483)
T ss_pred hhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhcc
Confidence 88887776442211 111 23467788888877762 21111112 256678888777665421 11222246778888
Q ss_pred EEccCCCCccccC----ccccCCCCCCCEEEeecCcCcc-cCCccCcCCCCCcEEECcCcccc--ccCChhccCCCCCCE
Q 003931 227 LGLSDNFLSGEIS----ANLIGNWTELESLQIQNNSFMG-NIPPEIGLLTKLQYLFLYRNNFS--GPIPSEIEKLTSLEN 299 (785)
Q Consensus 227 L~L~~n~l~~~~~----~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~ 299 (785)
+.+++|....+-- ...-..+..|+.+.|+++.... ..-..+..+++|+.+++.++.-- ..+...-.++++++.
T Consensus 377 lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v 456 (483)
T KOG4341|consen 377 LSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATHLPNIKV 456 (483)
T ss_pred CChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhhCcccee
Confidence 8888776432210 0112345668888888886432 23345667788888888877531 112222244555554
Q ss_pred EEC
Q 003931 300 LDL 302 (785)
Q Consensus 300 L~L 302 (785)
.-+
T Consensus 457 ~a~ 459 (483)
T KOG4341|consen 457 HAY 459 (483)
T ss_pred hhh
Confidence 443
No 288
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.38 E-value=3.7e-05 Score=81.32 Aligned_cols=88 Identities=17% Similarity=0.155 Sum_probs=51.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCch----------hhhccC--cccccccccCCC-------CC-CCchhH----HHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG--ELFLKDVLDQRL-------PP-PTGQLA----EAV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~--~~~~~~~~d~~l-------~~-~~~~~~----~~~ 732 (785)
..+.++|||||||++.|++||+.|..- ...+.. .+...++.+... .. ...... ..-
T Consensus 186 ~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (336)
T cd07849 186 GYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNAD 265 (336)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccC
Confidence 467899999999999999999988531 010100 011111111110 00 000000 011
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHHH--HHhcc
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQE--LSAKT 764 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~~--l~~~~ 764 (785)
..+..+...|.+.+|++||+|.||++. +....
T Consensus 266 ~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 266 PKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred cHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 235678889999999999999999774 54443
No 289
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.38 E-value=8.8e-05 Score=77.10 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=51.6
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc---h---h----hhccC--ccccccccc------CCCCCCCchhH-----HHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE---L---I----TSLSG--ELFLKDVLD------QRLPPPTGQLA-----EAVV 733 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~---~---~----~~~~~--~~~~~~~~d------~~l~~~~~~~~-----~~~~ 733 (785)
..+.++|||||||++.||+||+.|.. . . ..... ......+++ ........... ..--
T Consensus 181 ~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (301)
T cd07873 181 DYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDS 260 (301)
T ss_pred CCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCH
Confidence 35678999999999999999998843 0 0 00000 000001110 01100000000 0001
Q ss_pred HHHHHHhhcCCCCCCCCCChHHHHH--HHHhcccccCC
Q 003931 734 LTINVALACTSTTPDTRPSMRFVAQ--ELSAKTQAYLP 769 (785)
Q Consensus 734 ~~~~ial~C~~~~p~~Rp~m~~vv~--~l~~~~~~~~~ 769 (785)
.+.++...|...+|++||++.||++ +++...+.+..
T Consensus 261 ~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~~ 298 (301)
T cd07873 261 DGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIHK 298 (301)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhhc
Confidence 2346778899999999999999976 45555544443
No 290
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.37 E-value=5.4e-05 Score=78.28 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=22.5
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||++.|++||+.|.
T Consensus 180 ~~~~~~Dv~slG~il~~l~~g~~~~ 204 (291)
T cd07844 180 EYSTSLDMWGVGCIFYEMATGRPLF 204 (291)
T ss_pred ccCcHHHHHHHHHHHHHHHhCCCCC
Confidence 3578999999999999999999885
No 291
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.36 E-value=5.3e-05 Score=79.81 Aligned_cols=84 Identities=21% Similarity=0.348 Sum_probs=49.8
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC-c----ccc-cccccCCCCCCCchhHHHHHHHHHHHhhcC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-E----LFL-KDVLDQRLPPPTGQLAEAVVLTINVALACT 743 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~----~~~-~~~~d~~l~~~~~~~~~~~~~~~~ial~C~ 743 (785)
+|+......+.++|||||||++.|++||+.|.+....... . ... ..+......-+. .. -..+..+...|.
T Consensus 165 PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~---~~~~~~li~~~L 240 (329)
T cd05588 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR-SL---SVKASSVLKGFL 240 (329)
T ss_pred HHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCC-CC---CHHHHHHHHHHh
Confidence 3554555677899999999999999999999753221110 0 000 111111111111 11 112345667899
Q ss_pred CCCCCCCCC------hHHHH
Q 003931 744 STTPDTRPS------MRFVA 757 (785)
Q Consensus 744 ~~~p~~Rp~------m~~vv 757 (785)
+.+|++||+ +.||.
T Consensus 241 ~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 241 NKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred ccCHHHcCCCCCCCCHHHHh
Confidence 999999997 56664
No 292
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.36 E-value=5.8e-05 Score=79.25 Aligned_cols=81 Identities=19% Similarity=0.319 Sum_probs=47.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|.+-... ......+.......+. .... .+.++.-.|.+.+|++
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~~~~i~~~~~~~p~-~~~~---~~~~ll~~~L~~dp~~ 237 (321)
T cd05591 165 PEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDLFESILHDDVLYPV-WLSK---EAVSILKAFMTKNPNK 237 (321)
T ss_pred HHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCCCCCC-CCCH---HHHHHHHHHhccCHHH
Confidence 3444455678899999999999999999999541100 0000111111110000 0011 2345566799999999
Q ss_pred CC-------ChHHHH
Q 003931 750 RP-------SMRFVA 757 (785)
Q Consensus 750 Rp-------~m~~vv 757 (785)
|| ++.++.
T Consensus 238 R~~~~~~~~~~~~~~ 252 (321)
T cd05591 238 RLGCVASQGGEDAIK 252 (321)
T ss_pred cCCCCCCCCCHHHHh
Confidence 99 666654
No 293
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.36 E-value=4.4e-05 Score=79.99 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=49.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.....+.++|||||||++.|++||+.|.+-.... .....+.......+. ... ..+.++.-.|.+.+|++
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~~~~i~~~~~~~~~-~~~---~~~~~li~~~l~~dP~~ 237 (318)
T cd05570 165 PEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---ELFQSILEDEVRYPR-WLS---KEAKSILKSFLTKNPEK 237 (318)
T ss_pred HHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HHHHHHHcCCCCCCC-cCC---HHHHHHHHHHccCCHHH
Confidence 34444556788999999999999999999995311100 000001111110000 011 12345667899999999
Q ss_pred CCCh-----HHHHH
Q 003931 750 RPSM-----RFVAQ 758 (785)
Q Consensus 750 Rp~m-----~~vv~ 758 (785)
||++ .++.+
T Consensus 238 R~s~~~~~~~~ll~ 251 (318)
T cd05570 238 RLGCLPTGEQDIKG 251 (318)
T ss_pred cCCCCCCCHHHHhc
Confidence 9999 77754
No 294
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.35 E-value=0.00011 Score=77.18 Aligned_cols=25 Identities=16% Similarity=0.271 Sum_probs=22.6
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||++.|++||+.|.
T Consensus 192 ~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 192 HYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 4678999999999999999999884
No 295
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.35 E-value=0.00012 Score=75.68 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=22.6
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||+++|++||+.|.
T Consensus 180 ~~~~~~Dv~slG~i~~~l~tg~~pf 204 (294)
T PLN00009 180 HYSTPVDIWSVGCIFAEMVNQKPLF 204 (294)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 4678999999999999999999884
No 296
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.34 E-value=8.1e-05 Score=86.01 Aligned_cols=90 Identities=16% Similarity=0.238 Sum_probs=54.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+..+...+.++|||||||++.||+||+.|..-... ........+.++.-..+. .+.-..+.+++..|.+.+|++
T Consensus 200 PE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-~ki~~~~~i~~P~~~~p~---~~iP~~L~~LI~rcL~~DP~k 275 (932)
T PRK13184 200 PERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-RKISYRDVILSPIEVAPY---REIPPFLSQIAMKALAVDPAE 275 (932)
T ss_pred HHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch-hhhhhhhhccChhhcccc---ccCCHHHHHHHHHHccCChhh
Confidence 4666666788999999999999999999999531000 000000011111100000 001122456778899999999
Q ss_pred CC-ChHHHHHHHHhc
Q 003931 750 RP-SMRFVAQELSAK 763 (785)
Q Consensus 750 Rp-~m~~vv~~l~~~ 763 (785)
|| ++.++.+.|+..
T Consensus 276 R~ss~eeLl~~Le~~ 290 (932)
T PRK13184 276 RYSSVQELKQDLEPH 290 (932)
T ss_pred CcCHHHHHHHHHHHH
Confidence 95 677777777665
No 297
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.34 E-value=5.7e-05 Score=77.78 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=22.0
Q ss_pred cccccceeeeehhhhhhhhCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
.+.++|||||||++.||+||+.|.
T Consensus 177 ~~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 177 YSTSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCC
Confidence 478899999999999999999984
No 298
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.33 E-value=5.8e-05 Score=79.44 Aligned_cols=81 Identities=23% Similarity=0.314 Sum_probs=46.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC---cccc-cccccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG---ELFL-KDVLDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~---~~~~-~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
+|+......+.++|||||||++.|++||+.|.+....-.. .... ..+......-+.... ....++...|...
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~li~~~L~~ 240 (327)
T cd05617 165 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLS----VKASHVLKGFLNK 240 (327)
T ss_pred HHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCC----HHHHHHHHHHhcc
Confidence 3554555678899999999999999999999642110000 0000 011111111010011 1233566778999
Q ss_pred CCCCCCChH
Q 003931 746 TPDTRPSMR 754 (785)
Q Consensus 746 ~p~~Rp~m~ 754 (785)
+|++||+++
T Consensus 241 dP~~R~~~~ 249 (327)
T cd05617 241 DPKERLGCQ 249 (327)
T ss_pred CHHHcCCCC
Confidence 999999853
No 299
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.33 E-value=7.3e-05 Score=78.08 Aligned_cols=24 Identities=13% Similarity=0.091 Sum_probs=21.8
Q ss_pred cccccceeeeehhhhhhhhCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
.+.++|||||||++.|++||+.|.
T Consensus 201 ~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 201 YGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCC
Confidence 567899999999999999999874
No 300
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.33 E-value=6.2e-05 Score=79.11 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=47.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc--cCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL--DQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+......+.++|||||||++.||+||+.|..-..+ ......+. +..... ....+ +.++.-.|.+.+|+
T Consensus 165 E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~~~~~~~~~~~~p~---~~~~~---~~~li~~~L~~dP~ 235 (323)
T cd05571 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPR---TLSPE---AKSLLAGLLKKDPK 235 (323)
T ss_pred hhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCCCCCCC---CCCHH---HHHHHHHHccCCHH
Confidence 444445678899999999999999999999531000 00000000 111111 11112 33455689999999
Q ss_pred CCC-----ChHHHHH
Q 003931 749 TRP-----SMRFVAQ 758 (785)
Q Consensus 749 ~Rp-----~m~~vv~ 758 (785)
+|| +..++.+
T Consensus 236 ~R~~~~~~~~~~ll~ 250 (323)
T cd05571 236 QRLGGGPEDAKEIME 250 (323)
T ss_pred HcCCCCCCCHHHHHc
Confidence 999 6777653
No 301
>PTZ00284 protein kinase; Provisional
Probab=97.32 E-value=0.0001 Score=81.76 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=27.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+-.....+.++|||||||++.||+||+.|.+
T Consensus 314 PE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 314 PEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 355455567889999999999999999999964
No 302
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.32 E-value=7.2e-05 Score=76.12 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=26.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
|.......+.++|||||||++.|++||+.|..
T Consensus 179 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 179 EVISGEGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred hhhcCCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 33334556889999999999999999999953
No 303
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.32 E-value=6.1e-05 Score=87.49 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=49.7
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc-cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL-DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
...+.++||||||||++||+||+.|..-..... .....+- .+.+... .. . ..+..+...|.+.+|++||++.
T Consensus 218 ~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~--qli~~lk~~p~lpi~-~~-S---~eL~dLI~~~L~~dPeeRPSa~ 290 (1021)
T PTZ00266 218 KSYDDKSDMWALGCIIYELCSGKTPFHKANNFS--QLISELKRGPDLPIK-GK-S---KELNILIKNLLNLSAKERPSAL 290 (1021)
T ss_pred CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH--HHHHHHhcCCCCCcC-CC-C---HHHHHHHHHHhcCChhHCcCHH
Confidence 346789999999999999999999953110000 0000000 0111100 01 1 1234566789999999999999
Q ss_pred HHH--HHHHhcc
Q 003931 755 FVA--QELSAKT 764 (785)
Q Consensus 755 ~vv--~~l~~~~ 764 (785)
+++ .++..+.
T Consensus 291 QlL~h~~ik~i~ 302 (1021)
T PTZ00266 291 QCLGYQIIKNVG 302 (1021)
T ss_pred HHhccHHHhhcC
Confidence 997 4555443
No 304
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.31 E-value=0.00014 Score=77.53 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=27.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+-.....+.++|||||||++.||+||+.|..
T Consensus 199 PE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 199 PEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred HHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 354455577899999999999999999999953
No 305
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.31 E-value=9.7e-05 Score=78.33 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=50.8
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchh------h---hccC-c--cccccccc----------CCCCCCCchh--HHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELI------T---SLSG-E--LFLKDVLD----------QRLPPPTGQL--AEA 731 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~------~---~~~~-~--~~~~~~~d----------~~l~~~~~~~--~~~ 731 (785)
...+.++|||||||++.|++||+.|..-. . +... . .....+.+ +......... ...
T Consensus 190 ~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (342)
T cd07879 190 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKA 269 (342)
T ss_pred cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCC
Confidence 34678999999999999999999985300 0 0000 0 00000000 0000000000 000
Q ss_pred HHHHHHHHhhcCCCCCCCCCChHHHHH--HHHhccc
Q 003931 732 VVLTINVALACTSTTPDTRPSMRFVAQ--ELSAKTQ 765 (785)
Q Consensus 732 ~~~~~~ial~C~~~~p~~Rp~m~~vv~--~l~~~~~ 765 (785)
-..+.++...|.+.+|++||++.||++ .++..+.
T Consensus 270 ~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 270 SPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 112456778899999999999999984 3666554
No 306
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.31 E-value=4.6e-05 Score=80.10 Aligned_cols=78 Identities=13% Similarity=0.133 Sum_probs=44.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.||+||+.|..-... ......+......... .... .+.++.-.|.+.+|++|
T Consensus 166 E~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~-~~~~---~~~~li~~~l~~~p~~R 238 (323)
T cd05575 166 EVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEMYDNILNKPLRLKP-NISV---SARHLLEGLLQKDRTKR 238 (323)
T ss_pred hhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCCCCCCC-CCCH---HHHHHHHHHhhcCHHhC
Confidence 444445567899999999999999999999531000 0000111111111000 0111 23345567999999999
Q ss_pred CChHH
Q 003931 751 PSMRF 755 (785)
Q Consensus 751 p~m~~ 755 (785)
|++++
T Consensus 239 ~~~~~ 243 (323)
T cd05575 239 LGAKD 243 (323)
T ss_pred CCCCC
Confidence 99863
No 307
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.30 E-value=0.0001 Score=76.46 Aligned_cols=83 Identities=18% Similarity=0.208 Sum_probs=47.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc----------hhhhccC--cc------cccccccCCCCCCCc---hhHHHHHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG--EL------FLKDVLDQRLPPPTG---QLAEAVVLT 735 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~--~~------~~~~~~d~~l~~~~~---~~~~~~~~~ 735 (785)
..+.++|||||||++.|++||+.|.. ....+.. .. ............... .....-..+
T Consensus 179 ~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (298)
T cd07841 179 HYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDA 258 (298)
T ss_pred CCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHH
Confidence 45789999999999999999965532 0000000 00 000010000000000 000111245
Q ss_pred HHHHhhcCCCCCCCCCChHHHHHH
Q 003931 736 INVALACTSTTPDTRPSMRFVAQE 759 (785)
Q Consensus 736 ~~ial~C~~~~p~~Rp~m~~vv~~ 759 (785)
.++...|.+.+|++||+|.||++.
T Consensus 259 ~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 259 LDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHHhcCCcccCcCHHHHhhC
Confidence 677889999999999999999873
No 308
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.30 E-value=6.9e-05 Score=78.76 Aligned_cols=77 Identities=16% Similarity=0.297 Sum_probs=46.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|.+-... ......+.+.....+.... ..+..+...|.+.+|++
T Consensus 170 PE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~i~~~~~~~p~~~s----~~~~~li~~~l~~~p~~ 242 (323)
T cd05616 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIMEHNVAYPKSMS----KEAVAICKGLMTKHPGK 242 (323)
T ss_pred HHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCCcCC----HHHHHHHHHHcccCHHh
Confidence 3555555678999999999999999999999641100 0001111111111111111 12346678899999999
Q ss_pred CCCh
Q 003931 750 RPSM 753 (785)
Q Consensus 750 Rp~m 753 (785)
||+.
T Consensus 243 R~~~ 246 (323)
T cd05616 243 RLGC 246 (323)
T ss_pred cCCC
Confidence 9984
No 309
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.30 E-value=0.00012 Score=74.01 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=46.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccccccccc-CCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLD-QRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++||||||+++.|++||+.|.+....... ....+... .....+. ... ..+.++.-.|.+.+|.+
T Consensus 169 E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~---~~~~~~i~~~l~~~p~~ 243 (258)
T cd05578 169 EVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIRAKQETADVLYPA-TWS---TEAIDAINKLLERDPQK 243 (258)
T ss_pred HHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH-HHHHHHhccccccCcc-cCc---HHHHHHHHHHccCChhH
Confidence 444455578999999999999999999999652111000 00000111 1100000 111 23445667899999999
Q ss_pred CCChH
Q 003931 750 RPSMR 754 (785)
Q Consensus 750 Rp~m~ 754 (785)
||+..
T Consensus 244 R~~~~ 248 (258)
T cd05578 244 RLGDN 248 (258)
T ss_pred cCCcc
Confidence 99993
No 310
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.29 E-value=8.7e-05 Score=76.87 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=46.6
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc----h------hhhccC-c-ccccccccCC----CCC-CCchhH----HHHHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE----L------ITSLSG-E-LFLKDVLDQR----LPP-PTGQLA----EAVVLT 735 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~----~------~~~~~~-~-~~~~~~~d~~----l~~-~~~~~~----~~~~~~ 735 (785)
..+.++|||||||++.|++||+.|.. . ...+.. . ....++.+.. ... ...... ..-..+
T Consensus 188 ~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (295)
T cd07837 188 HYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEG 267 (295)
T ss_pred CCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHH
Confidence 45789999999999999999998852 0 111000 0 0000000000 000 000000 011235
Q ss_pred HHHHhhcCCCCCCCCCChHHHHH
Q 003931 736 INVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 736 ~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.++...|.+.+|++||++.|++.
T Consensus 268 ~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 268 LDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHHHHHccCChhhcCCHHHHhc
Confidence 56778999999999999999864
No 311
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.29 E-value=7.8e-05 Score=79.68 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=25.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
|.-.....+.++|||||||++.|++||+.|.
T Consensus 192 E~~~~~~~~~~~DiwSlG~il~el~tg~~pf 222 (359)
T cd07876 192 EVILGMGYKENVDIWSVGCIMGELVKGSVIF 222 (359)
T ss_pred hhccCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 4434456778999999999999999999885
No 312
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.28 E-value=7.3e-05 Score=80.07 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-.....+.++|||||||++.||+||+.|.
T Consensus 194 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf 225 (364)
T cd07875 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225 (364)
T ss_pred HHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence 45555566788999999999999999999885
No 313
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.28 E-value=0.00016 Score=72.48 Aligned_cols=77 Identities=27% Similarity=0.491 Sum_probs=48.7
Q ss_pred hhcccccccceeeeehhhhhhhhCCCCCch-----hhhccCccccccccc---CCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMMGRHPGEL-----ITSLSGELFLKDVLD---QRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLElltgk~p~~~-----~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
.+...+.++||||||+.++|+.+||=|.-- ..|+ +-...++| |++.. .....+. -...-.|.+.
T Consensus 250 ~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~---~Ll~~Iv~~ppP~lP~--~~fS~ef---~~FV~~CL~K 321 (364)
T KOG0581|consen 250 SGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF---ELLCAIVDEPPPRLPE--GEFSPEF---RSFVSCCLRK 321 (364)
T ss_pred cCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH---HHHHHHhcCCCCCCCc--ccCCHHH---HHHHHHHhcC
Confidence 345677889999999999999999988421 1111 01233444 22221 1112223 3345679999
Q ss_pred CCCCCCChHHHHH
Q 003931 746 TPDTRPSMRFVAQ 758 (785)
Q Consensus 746 ~p~~Rp~m~~vv~ 758 (785)
+|.+||+.++..+
T Consensus 322 dp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 322 DPSERPSAKQLLQ 334 (364)
T ss_pred CcccCCCHHHHhc
Confidence 9999999988754
No 314
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.27 E-value=8.6e-05 Score=76.47 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=47.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|+++|+.|..-...-.......+.+........... -..+.++.-.|.+.+|++|
T Consensus 171 E~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~P~~R 247 (285)
T cd05605 171 EVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKF---SEAARSICRQLLTKDPGFR 247 (285)
T ss_pred HHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCccc---CHHHHHHHHHHccCCHHHh
Confidence 4444456678999999999999999999995310000000000011111000000011 1224567889999999999
Q ss_pred C-----ChHHH
Q 003931 751 P-----SMRFV 756 (785)
Q Consensus 751 p-----~m~~v 756 (785)
| ++.++
T Consensus 248 ~~~~~~~~~~l 258 (285)
T cd05605 248 LGCRGEGAEEV 258 (285)
T ss_pred cCCCCCCHHHH
Confidence 9 56565
No 315
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.27 E-value=5.7e-05 Score=77.82 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=47.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhc-cCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSL-SGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-.....+.++|||||||++.|++||+.|..-.... ..+.....+.+...... ... -..+.++...|.+.+|+
T Consensus 170 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~li~~~l~~~P~ 245 (285)
T cd05632 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYS-AKF---SEEAKSICKMLLTKDPK 245 (285)
T ss_pred hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccC-ccC---CHHHHHHHHHHccCCHh
Confidence 34444556788999999999999999999995310000 00000000111100000 011 11245667789999999
Q ss_pred CCCChHHH
Q 003931 749 TRPSMRFV 756 (785)
Q Consensus 749 ~Rp~m~~v 756 (785)
+||++.|+
T Consensus 246 ~R~~~~~~ 253 (285)
T cd05632 246 QRLGCQEE 253 (285)
T ss_pred HcCCCccc
Confidence 99995543
No 316
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.27 E-value=0.00014 Score=78.39 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=25.1
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
|+......+.++|||||||++.|++||+.|
T Consensus 253 E~~~~~~~~~~~DiwSlGvil~elltg~~p 282 (391)
T PHA03212 253 ELLARDPYGPAVDIWSAGIVLFEMATCHDS 282 (391)
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 444445567899999999999999999987
No 317
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.26 E-value=0.00015 Score=74.76 Aligned_cols=25 Identities=20% Similarity=0.297 Sum_probs=22.4
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||++.|++||+.|.
T Consensus 178 ~~~~~~Dv~slG~il~~l~tg~~~~ 202 (285)
T cd07861 178 RYSTPVDIWSIGTIFAEMATKKPLF 202 (285)
T ss_pred CcCcHHHHHHHHHHHHHHHHCCCCC
Confidence 3578999999999999999999875
No 318
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.26 E-value=6.8e-05 Score=78.46 Aligned_cols=72 Identities=19% Similarity=0.303 Sum_probs=45.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCch------hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGEL------ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTS 744 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~------~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~ 744 (785)
|+-.....+.++|||||||++.|++||+.|..- ...+.. ..+..... ...+ +.++...|.+
T Consensus 166 E~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~-------~~~~~~~~---~~~~---~~~li~~~l~ 232 (316)
T cd05619 166 EILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM-------DNPCYPRW---LTRE---AKDILVKLFV 232 (316)
T ss_pred HHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-------CCCCCCcc---CCHH---HHHHHHHHhc
Confidence 444455678899999999999999999999531 111110 01111110 1111 2345667999
Q ss_pred CCCCCCCChHH
Q 003931 745 TTPDTRPSMRF 755 (785)
Q Consensus 745 ~~p~~Rp~m~~ 755 (785)
.+|++||++.+
T Consensus 233 ~~P~~R~~~~~ 243 (316)
T cd05619 233 REPERRLGVKG 243 (316)
T ss_pred cCHhhcCCChH
Confidence 99999999973
No 319
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.26 E-value=6.5e-05 Score=78.88 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=45.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.||+||+.|..-... ......+....+.-+... -..+.++...|.+.+|++|
T Consensus 166 E~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~----~~~~~~li~~~l~~~p~~R 238 (321)
T cd05603 166 EVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---SQMYDNILHKPLQLPGGK----TVAACDLLVGLLHKDQRRR 238 (321)
T ss_pred HHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---HHHHHHHhcCCCCCCCCC----CHHHHHHHHHHccCCHhhc
Confidence 444445567899999999999999999999531000 000011111111111111 1234566778999999999
Q ss_pred CChH
Q 003931 751 PSMR 754 (785)
Q Consensus 751 p~m~ 754 (785)
|+..
T Consensus 239 ~~~~ 242 (321)
T cd05603 239 LGAK 242 (321)
T ss_pred CCCC
Confidence 9764
No 320
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.25 E-value=7.8e-05 Score=78.20 Aligned_cols=77 Identities=21% Similarity=0.305 Sum_probs=45.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|..-.... .....+.......+. .... .+.++.-.|.+.+|++
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~~~i~~~~~~~~~-~~~~---~~~~li~~~L~~dP~~ 237 (320)
T cd05590 165 PEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED---DLFEAILNDEVVYPT-WLSQ---DAVDILKAFMTKNPTM 237 (320)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHHhcCCCCCCC-CCCH---HHHHHHHHHcccCHHH
Confidence 35444556788999999999999999999995411100 000011111110000 0111 2335566799999999
Q ss_pred CCCh
Q 003931 750 RPSM 753 (785)
Q Consensus 750 Rp~m 753 (785)
||+.
T Consensus 238 R~~~ 241 (320)
T cd05590 238 RLGS 241 (320)
T ss_pred CCCC
Confidence 9998
No 321
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.25 E-value=0.00019 Score=76.52 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=26.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|.......+.++|||||||++.|++||+.|.
T Consensus 186 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf 217 (353)
T cd07850 186 PEVILGMGYKENVDIWSVGCIMGEMIRGTVLF 217 (353)
T ss_pred HHHHhCCCCCCchhhHhHHHHHHHHHHCCCCC
Confidence 34444556788999999999999999999874
No 322
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.24 E-value=7.9e-05 Score=78.34 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=45.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|..-... ......+.......+. ... ..+.++.-.|.+.+|++|
T Consensus 171 E~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~~~~~i~~~~~~~p~-~~~---~~~~~li~~~L~~dP~~R 243 (324)
T cd05589 171 EVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EEVFDSIVNDEVRYPR-FLS---REAISIMRRLLRRNPERR 243 (324)
T ss_pred hHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCC-CCC---HHHHHHHHHHhhcCHhHc
Confidence 444445667899999999999999999999531000 0000011111111000 011 123456778999999999
Q ss_pred CChHH
Q 003931 751 PSMRF 755 (785)
Q Consensus 751 p~m~~ 755 (785)
|++.+
T Consensus 244 ~~~~~ 248 (324)
T cd05589 244 LGSGE 248 (324)
T ss_pred CCCCC
Confidence 96544
No 323
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.24 E-value=0.00019 Score=72.69 Aligned_cols=72 Identities=18% Similarity=0.351 Sum_probs=43.5
Q ss_pred cccceeeeehhhhhhhhCCCCCch----hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGEL----ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~~----~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
.++||||+|++++||+||++|..- +.++...+ .+-.-|.+... ..++.. +.-..|...+|++|||+.+
T Consensus 201 ~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig--~~~~~P~ip~~---ls~~a~---~Fl~~C~~~~p~~Rpta~e 272 (313)
T KOG0198|consen 201 RESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG--REDSLPEIPDS---LSDEAK---DFLRKCFKRDPEKRPTAEE 272 (313)
T ss_pred ccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh--ccCCCCCCCcc---cCHHHH---HHHHHHhhcCcccCcCHHH
Confidence 489999999999999999999431 11111000 00111222211 111222 3345799999999999999
Q ss_pred HHHH
Q 003931 756 VAQE 759 (785)
Q Consensus 756 vv~~ 759 (785)
...-
T Consensus 273 LL~h 276 (313)
T KOG0198|consen 273 LLEH 276 (313)
T ss_pred HhhC
Confidence 8653
No 324
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.24 E-value=7.7e-05 Score=78.91 Aligned_cols=88 Identities=19% Similarity=0.160 Sum_probs=51.0
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhh----------hccC--cccccccccCCC-------CC-CCch----hHHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELIT----------SLSG--ELFLKDVLDQRL-------PP-PTGQ----LAEA 731 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~----------~~~~--~~~~~~~~d~~l-------~~-~~~~----~~~~ 731 (785)
...+.++|||||||++.|+++|+.|..-.. .+.. ......+.++.. .. .... ....
T Consensus 184 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
T cd07858 184 SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHA 263 (337)
T ss_pred CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccC
Confidence 347789999999999999999998853111 0000 000000111100 00 0000 0011
Q ss_pred HHHHHHHHhhcCCCCCCCCCChHHHHHH--HHhc
Q 003931 732 VVLTINVALACTSTTPDTRPSMRFVAQE--LSAK 763 (785)
Q Consensus 732 ~~~~~~ial~C~~~~p~~Rp~m~~vv~~--l~~~ 763 (785)
-..+.++...|.+.+|++||+|.||++- +..+
T Consensus 264 ~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 264 NPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred CHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 2335678889999999999999999764 5544
No 325
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.23 E-value=0.00012 Score=77.11 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=46.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccccccc--ccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDV--LDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+-.....+.++|||||||++.|++||+.|..-..+. .....+ -+..+.. ....+ +.++.-.|.+.+|+
T Consensus 165 E~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---~~~~~~~~~~~~~p~---~~~~~---~~~li~~~L~~dP~ 235 (328)
T cd05593 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEDIKFPR---TLSAD---AKSLLSGLLIKDPN 235 (328)
T ss_pred hhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---HHHHHhccCCccCCC---CCCHH---HHHHHHHHcCCCHH
Confidence 4444456688999999999999999999995311100 000000 0111111 11122 23445679999999
Q ss_pred CCC-----ChHHHHH
Q 003931 749 TRP-----SMRFVAQ 758 (785)
Q Consensus 749 ~Rp-----~m~~vv~ 758 (785)
+|| +..|+.+
T Consensus 236 ~R~~~~~~~~~~il~ 250 (328)
T cd05593 236 KRLGGGPDDAKEIMR 250 (328)
T ss_pred HcCCCCCCCHHHHhc
Confidence 997 7777754
No 326
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.23 E-value=7.9e-05 Score=77.98 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=46.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.....+.++|||||||++.|++||+.|..-.........+ ..-.+..... ...+ +.++.-.|.+.+|++
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~-~~~~~~~~~~---~~~~---~~~li~~~l~~dP~~ 237 (316)
T cd05620 165 PEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI-RVDTPHYPRW---ITKE---SKDILEKLFERDPTR 237 (316)
T ss_pred HHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCCCC---CCHH---HHHHHHHHccCCHHH
Confidence 35544556788999999999999999999995310000000000 0001111111 1112 234556799999999
Q ss_pred CCChHH
Q 003931 750 RPSMRF 755 (785)
Q Consensus 750 Rp~m~~ 755 (785)
||++.+
T Consensus 238 R~~~~~ 243 (316)
T cd05620 238 RLGVVG 243 (316)
T ss_pred cCCChH
Confidence 999853
No 327
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.22 E-value=0.00015 Score=77.74 Aligned_cols=77 Identities=18% Similarity=0.267 Sum_probs=46.5
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCC-C-chhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPP-T-GQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~-~-~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|.....-.|+.||+||+||||.||+||+.|.. ..+.. .++. .++..+ . ....++.. .+--.|.+.+|.
T Consensus 483 Evl~~~~yt~acD~WSLGvlLy~ML~G~tp~~-----~~P~~-~ei~-~~i~~~~~s~~vS~~AK---dLl~~LL~~dP~ 552 (612)
T KOG0603|consen 483 EVLAIQEYTEACDWWSLGVLLYEMLTGRTLFA-----AHPAG-IEIH-TRIQMPKFSECVSDEAK---DLLQQLLQVDPA 552 (612)
T ss_pred hhhccCCCCcchhhHHHHHHHHHHHhCCCccc-----cCCch-HHHH-HhhcCCccccccCHHHH---HHHHHhccCChh
Confidence 55556677899999999999999999998842 01110 0111 111100 0 00011111 233457899999
Q ss_pred CCCChHHHH
Q 003931 749 TRPSMRFVA 757 (785)
Q Consensus 749 ~Rp~m~~vv 757 (785)
+||+|.++-
T Consensus 553 ~Rl~~~~i~ 561 (612)
T KOG0603|consen 553 LRLGADEIG 561 (612)
T ss_pred hCcChhhhc
Confidence 999999874
No 328
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.22 E-value=0.0002 Score=75.64 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=48.5
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhh------ccC--------------ccccccccc---CCCCCCCchh-HHH
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITS------LSG--------------ELFLKDVLD---QRLPPPTGQL-AEA 731 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~------~~~--------------~~~~~~~~d---~~l~~~~~~~-~~~ 731 (785)
...+.++|||||||++.|+++|+.|..-..+ +.. .....+.++ ..-....... ...
T Consensus 187 ~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T cd07855 187 PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKA 266 (334)
T ss_pred cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccC
Confidence 3568899999999999999999998531100 000 000011111 0000000000 001
Q ss_pred HHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 732 VVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 732 ~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
-..+..+...|.+.+|++||++.+|++
T Consensus 267 ~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 267 SPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 133557788999999999999999876
No 329
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.22 E-value=0.00012 Score=77.98 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=24.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
|+-.....+.++|||||||+++|++++.+|
T Consensus 226 E~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 226 EVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred eecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 443445678999999999999999997765
No 330
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.22 E-value=6.6e-05 Score=77.59 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=43.7
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|..-... ......+......-+... .. .+.++.-.|.+.+|.+|
T Consensus 168 E~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~-~~---~~~~li~~~l~~dp~~R 240 (291)
T cd05612 168 EVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---FGIYEKILAGKLEFPRHL-DL---YAKDLIKKLLVVDRTRR 240 (291)
T ss_pred HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCcCCCccC-CH---HHHHHHHHHcCCCHHHc
Confidence 444445567899999999999999999999531000 000111111111100000 11 23456678999999999
Q ss_pred CC
Q 003931 751 PS 752 (785)
Q Consensus 751 p~ 752 (785)
|+
T Consensus 241 ~~ 242 (291)
T cd05612 241 LG 242 (291)
T ss_pred cC
Confidence 95
No 331
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=97.21 E-value=0.00015 Score=76.82 Aligned_cols=82 Identities=21% Similarity=0.278 Sum_probs=47.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc---hhhhcc-------C--cccc--------cccccCCCCCCCchhHH----HH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE---LITSLS-------G--ELFL--------KDVLDQRLPPPTGQLAE----AV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~---~~~~~~-------~--~~~~--------~~~~d~~l~~~~~~~~~----~~ 732 (785)
..+.++|||||||++.|++||+.|.. ....+. . +... ...++...........+ .-
T Consensus 192 ~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 271 (343)
T cd07851 192 HYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGAN 271 (343)
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCC
Confidence 46789999999999999999998842 000000 0 0000 00000000000000000 11
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
..+.++...|.+.+|++||++.||.+
T Consensus 272 ~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 272 PLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 24557788999999999999999865
No 332
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.20 E-value=0.00023 Score=74.53 Aligned_cols=25 Identities=16% Similarity=0.207 Sum_probs=22.5
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||++.|++||+.|.
T Consensus 192 ~~~~~~Dv~slG~~l~~l~~~~~~~ 216 (316)
T cd07842 192 HYTKAIDIWAIGCIFAELLTLEPIF 216 (316)
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCC
Confidence 3578999999999999999999885
No 333
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.20 E-value=9e-05 Score=79.61 Aligned_cols=26 Identities=23% Similarity=0.289 Sum_probs=23.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++|||||||++.||+||+.|.+
T Consensus 181 ~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 181 HYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred CCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 35789999999999999999998853
No 334
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.18 E-value=0.0002 Score=75.63 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=42.9
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCcccc-ccc--ccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCC---
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFL-KDV--LDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRP--- 751 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~-~~~--~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp--- 751 (785)
.+.++|||||||++.|++||+.|.+........... ..+ .++.+.... .. .+.++.-.|.+.+|++||
T Consensus 184 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 184 HGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFI---GP---EAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred CCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCC---CH---HHHHHHHHHcCCCHHHcCCCC
Confidence 567899999999999999999995311000000000 001 122221111 11 233556689999999999
Q ss_pred --ChHHHH
Q 003931 752 --SMRFVA 757 (785)
Q Consensus 752 --~m~~vv 757 (785)
+..++.
T Consensus 258 ~~~~~~~l 265 (332)
T cd05614 258 PQGASEIK 265 (332)
T ss_pred CCCHHHHH
Confidence 455554
No 335
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.18 E-value=0.00012 Score=75.35 Aligned_cols=83 Identities=14% Similarity=0.155 Sum_probs=49.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccccccccc---CCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLD---QRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+-.....+.++|||||||++.|++||+.|.+....-.........++ ..... .. -..+.++.-.|.+.+
T Consensus 170 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~li~~~l~~~ 243 (285)
T cd05630 170 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSE---KF---SPDARSLCKMLLCKD 243 (285)
T ss_pred hHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCc---cC---CHHHHHHHHHHhhcC
Confidence 3555556678899999999999999999999641100000000011111 01110 01 112345667899999
Q ss_pred CCCCCC-----hHHHHH
Q 003931 747 PDTRPS-----MRFVAQ 758 (785)
Q Consensus 747 p~~Rp~-----m~~vv~ 758 (785)
|++||+ +.|+.+
T Consensus 244 p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 244 PKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHccCCCCCchHHHHc
Confidence 999999 667654
No 336
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.18 E-value=1.4e-05 Score=76.11 Aligned_cols=100 Identities=27% Similarity=0.289 Sum_probs=74.3
Q ss_pred CCCCCEEEccCCCCccccCccccCCCCCCCEEEeecCcCcccCCccCcCCCCCcEEECcCccccccCC-hhccCCCCCCE
Q 003931 221 LSKLNDLGLSDNFLSGEISANLIGNWTELESLQIQNNSFMGNIPPEIGLLTKLQYLFLYRNNFSGPIP-SEIEKLTSLEN 299 (785)
Q Consensus 221 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~ 299 (785)
+.+.+.|++.+|.+. +|. +...++.|++|.|+-|+++..-| +..|++|++|+|..|.|..... ..+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~-DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLD-DIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCcc-HHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 456677888888887 443 36788999999999999986544 7889999999999998864321 33578899999
Q ss_pred EECcCCcccccCCcc-----CcCCCCCCEEE
Q 003931 300 LDLSGNQLSGTIPPT-----LWNLTNLLSLQ 325 (785)
Q Consensus 300 L~Ls~n~l~~~~p~~-----l~~l~~L~~L~ 325 (785)
|+|..|.-.|.-+.. +..+|+|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 999998877665433 44566776664
No 337
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.16 E-value=8.1e-05 Score=78.18 Aligned_cols=81 Identities=21% Similarity=0.244 Sum_probs=46.2
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|..-... ......+.......+. ....++ .++.-.|.+.+|++|
T Consensus 165 E~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~~~p~-~~~~~~---~~li~~~L~~dP~~R 237 (323)
T cd05595 165 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEIRFPR-TLSPEA---KSLLAGLLKKDPKQR 237 (323)
T ss_pred ccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCCCCC-CCCHHH---HHHHHHHccCCHHHh
Confidence 433345567899999999999999999999531000 0000011111110000 111122 344557999999999
Q ss_pred C-----ChHHHHH
Q 003931 751 P-----SMRFVAQ 758 (785)
Q Consensus 751 p-----~m~~vv~ 758 (785)
| ++.++.+
T Consensus 238 ~~~~~~~~~~~l~ 250 (323)
T cd05595 238 LGGGPSDAKEVME 250 (323)
T ss_pred CCCCCCCHHHHHc
Confidence 8 7777654
No 338
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.15 E-value=0.00024 Score=72.68 Aligned_cols=75 Identities=24% Similarity=0.334 Sum_probs=45.3
Q ss_pred cccccceeeeehhhhhhhhCCCCCc-------hhhhccCcc-c-ccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGE-------LITSLSGEL-F-LKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~-------~~~~~~~~~-~-~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
..-|+|+|||||-.+|+.+|..|.. +..-..... . ....+|..-.... -..+-+..-.|.+.+|+
T Consensus 209 YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~------~ksf~e~i~~CL~kDP~ 282 (516)
T KOG0582|consen 209 YDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKF------SKSFREMIALCLVKDPS 282 (516)
T ss_pred ccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhh------cHHHHHHHHHHhhcCcc
Confidence 3579999999999999999999953 111111100 0 0111111110000 01344556679999999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+|||..+..+
T Consensus 283 kRptAskLlk 292 (516)
T KOG0582|consen 283 KRPTASKLLK 292 (516)
T ss_pred cCCCHHHHhc
Confidence 9999998754
No 339
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.14 E-value=0.00013 Score=76.79 Aligned_cols=80 Identities=19% Similarity=0.144 Sum_probs=46.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+-.....+.++|||||||++.|++||+.|..-.... .....+.+..+.-+... .. .+.++.-.|.+.+|++|
T Consensus 185 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~~i~~~~~~~p~~~-~~---~~~~li~~~L~~dP~~R 257 (329)
T PTZ00263 185 EVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF---RIYEKILAGRLKFPNWF-DG---RARDLVKGLLQTDHTKR 257 (329)
T ss_pred HHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH---HHHHHHhcCCcCCCCCC-CH---HHHHHHHHHhhcCHHHc
Confidence 4444555678999999999999999999995310000 00011111111111001 11 23456778999999999
Q ss_pred CC-----hHHHH
Q 003931 751 PS-----MRFVA 757 (785)
Q Consensus 751 p~-----m~~vv 757 (785)
|+ +.|+.
T Consensus 258 ~~~~~~~~~~ll 269 (329)
T PTZ00263 258 LGTLKGGVADVK 269 (329)
T ss_pred CCCCCCCHHHHh
Confidence 96 55554
No 340
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.14 E-value=0.00015 Score=74.65 Aligned_cols=25 Identities=24% Similarity=0.404 Sum_probs=22.3
Q ss_pred cccccceeeeehhhhhhhhCCCCCc
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
.+.++|||||||+++|++||+.|..
T Consensus 178 ~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 178 YSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4678999999999999999998853
No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.14 E-value=0.00012 Score=74.55 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=46.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhcc-CcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLS-GELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
|+-.....+.++|||||||++.|++||+.|..-...-. ................. .... .+.++...|.+.+|.+
T Consensus 176 E~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~li~~~l~~~p~~ 251 (267)
T PHA03390 176 EKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIK-NVSK---NANDFVQSMLKYNINY 251 (267)
T ss_pred hhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCccc-ccCH---HHHHHHHHHhccChhh
Confidence 44444556789999999999999999999963110000 00000000011110000 0111 2334456899999999
Q ss_pred CCC-hHHHH
Q 003931 750 RPS-MRFVA 757 (785)
Q Consensus 750 Rp~-m~~vv 757 (785)
||+ +.++.
T Consensus 252 R~~~~~~~l 260 (267)
T PHA03390 252 RLTNYNEII 260 (267)
T ss_pred CCchHHHHh
Confidence 995 67764
No 342
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.13 E-value=0.0001 Score=77.55 Aligned_cols=76 Identities=14% Similarity=0.306 Sum_probs=45.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||++.|++||+.|.+-... ......+.+....-+.... . .+.++...|.+.+|++|
T Consensus 171 E~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~~~~~~~~~~~~-~---~~~~li~~~l~~~P~~R 243 (324)
T cd05587 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DELFQSIMEHNVSYPKSLS-K---EAVSICKGLLTKHPAKR 243 (324)
T ss_pred hhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCCCCCCCCC-H---HHHHHHHHHhhcCHHHc
Confidence 444445567899999999999999999999531100 0000111111111010011 1 23456678999999999
Q ss_pred CCh
Q 003931 751 PSM 753 (785)
Q Consensus 751 p~m 753 (785)
|+.
T Consensus 244 ~~~ 246 (324)
T cd05587 244 LGC 246 (324)
T ss_pred CCC
Confidence 986
No 343
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.12 E-value=0.00027 Score=76.43 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=26.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-.....+.++|||||||++.||+||+.|.
T Consensus 256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf 287 (392)
T PHA03207 256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287 (392)
T ss_pred HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 34444556788999999999999999999995
No 344
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=97.12 E-value=0.0002 Score=76.08 Aligned_cols=83 Identities=24% Similarity=0.350 Sum_probs=57.6
Q ss_pred cccccccceeeeehhhhhhhh-CCCCCchhhhccCccccccccc-CCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCh
Q 003931 676 MRVTDKCDVFSFGVVALEVMM-GRHPGELITSLSGELFLKDVLD-QRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSM 753 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLEllt-gk~p~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m 753 (785)
.|.|+.+|||=|||-+.|+++ |.+|..+| ...+-+..+-. .++. -...|--.+..+.-.|++.+|.+||..
T Consensus 567 RrFTtASDVWMFgVCmWEIl~lGvkPfqgv---kNsDVI~~iEnGeRlP----~P~nCPp~LYslmskcWayeP~kRPrf 639 (974)
T KOG4257|consen 567 RRFTTASDVWMFGVCMWEILSLGVKPFQGV---KNSDVIGHIENGERLP----CPPNCPPALYSLMSKCWAYEPSKRPRF 639 (974)
T ss_pred hcccchhhHHHHHHHHHHHHHhcCCccccc---cccceEEEecCCCCCC----CCCCCChHHHHHHHHHhccCcccCCcH
Confidence 578999999999999999987 99996433 22211111111 1221 112344556677889999999999999
Q ss_pred HHHHHHHHhccc
Q 003931 754 RFVAQELSAKTQ 765 (785)
Q Consensus 754 ~~vv~~l~~~~~ 765 (785)
.++++.|.+|.+
T Consensus 640 tei~~~lsdv~q 651 (974)
T KOG4257|consen 640 TEIKAILSDVLQ 651 (974)
T ss_pred HHHHHHHHHHHH
Confidence 999999887654
No 345
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.11 E-value=0.00017 Score=73.97 Aligned_cols=84 Identities=20% Similarity=0.256 Sum_probs=47.9
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhh-ccCcccccccc--cCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITS-LSGELFLKDVL--DQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~-~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
|+..+...+.++|||||||++.|++||+.|..-... .........+. ...... ....+ +.++.-.|.+.+|
T Consensus 164 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~li~~~l~~~p 237 (277)
T cd05577 164 EVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPD---KFSPE---AKDLCEALLQKDP 237 (277)
T ss_pred HHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCc---cCCHH---HHHHHHHHccCCh
Confidence 444445577899999999999999999999531111 10000000011 001111 01112 3355667899999
Q ss_pred CCCCChHH-HHHHH
Q 003931 748 DTRPSMRF-VAQEL 760 (785)
Q Consensus 748 ~~Rp~m~~-vv~~l 760 (785)
++||+.++ .+..+
T Consensus 238 ~~R~~~~~~~~~~l 251 (277)
T cd05577 238 EKRLGCRGGSADEV 251 (277)
T ss_pred hHccCCCcccHHHH
Confidence 99996666 44444
No 346
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.10 E-value=0.00019 Score=73.89 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=45.5
Q ss_pred cccccceeeeehhhhhhhhCCCCCc----------hhhhccCc---cc--c------cccccCCCCCCC-ch-hHHHHHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSGE---LF--L------KDVLDQRLPPPT-GQ-LAEAVVL 734 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~~---~~--~------~~~~d~~l~~~~-~~-~~~~~~~ 734 (785)
.+.++||||+|+++.|++||+.|.. ....+... .+ . ..+..+.-.... .. ..+.-..
T Consensus 178 ~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (286)
T cd07832 178 YDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPE 257 (286)
T ss_pred CCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHH
Confidence 4679999999999999999976542 01111000 00 0 000000000000 00 0011134
Q ss_pred HHHHHhhcCCCCCCCCCChHHHHH
Q 003931 735 TINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 735 ~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
+.++.-.|.+.+|++||+|.+|++
T Consensus 258 ~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 258 ALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHHHHHHhccChhhCCCHHHHhh
Confidence 557778899999999999999864
No 347
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.09 E-value=0.00014 Score=75.99 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=22.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||+++|++||+.|.
T Consensus 181 ~~~~~~DiwslG~il~el~tg~~pf 205 (309)
T cd07872 181 EYSTQIDMWGVGCIFFEMASGRPLF 205 (309)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 4678999999999999999999885
No 348
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.09 E-value=0.00011 Score=77.42 Aligned_cols=83 Identities=13% Similarity=0.142 Sum_probs=46.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.....+.++|||||||++.||+||+.|..-... ......+......... ....+ +.++--.|.+.+|.+
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~-~~~~~---~~~li~~~l~~~p~~ 237 (325)
T cd05602 165 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDNILNKPLQLKP-NITNS---ARHLLEGLLQKDRTK 237 (325)
T ss_pred HHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---HHHHHHHHhCCcCCCC-CCCHH---HHHHHHHHcccCHHH
Confidence 3444455677899999999999999999999530000 0000011111110000 11112 234445789999999
Q ss_pred CCChHHHHHH
Q 003931 750 RPSMRFVAQE 759 (785)
Q Consensus 750 Rp~m~~vv~~ 759 (785)
||+..+.+.+
T Consensus 238 R~~~~~~~~~ 247 (325)
T cd05602 238 RLGAKDDFME 247 (325)
T ss_pred CCCCCCCHHH
Confidence 9988754443
No 349
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.08 E-value=0.00019 Score=72.91 Aligned_cols=82 Identities=15% Similarity=0.111 Sum_probs=46.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++||||||+++.|++||+.|..-... .......++.+.......... .-..+..+...|.+.+|++|
T Consensus 162 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~l~~~p~~R 238 (262)
T cd05572 162 EIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKLEFPNY--IDKAAKDLIKQLLRRNPEER 238 (262)
T ss_pred hHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCCCCCcc--cCHHHHHHHHHHccCChhhC
Confidence 433345567899999999999999999999531110 000001111210000000000 01235567788999999999
Q ss_pred CChHH
Q 003931 751 PSMRF 755 (785)
Q Consensus 751 p~m~~ 755 (785)
|+|.+
T Consensus 239 ~~~~~ 243 (262)
T cd05572 239 LGNLK 243 (262)
T ss_pred cCCcc
Confidence 99543
No 350
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.07 E-value=0.00016 Score=76.37 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=47.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc----------hhhhccCc--c-cccccccCCC----CCCCchhH----HHHHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSGE--L-FLKDVLDQRL----PPPTGQLA----EAVVLT 735 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~~--~-~~~~~~d~~l----~~~~~~~~----~~~~~~ 735 (785)
..+.++|||||||+++|++||+.|.. +...+... . +....-.+.. ........ ..-..+
T Consensus 210 ~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (335)
T PTZ00024 210 KYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDA 289 (335)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHH
Confidence 35789999999999999999998853 11111110 0 0000000000 00000000 011235
Q ss_pred HHHHhhcCCCCCCCCCChHHHHH
Q 003931 736 INVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 736 ~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.++...|.+.+|++||++.||+.
T Consensus 290 ~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 290 IDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHcCCCchhccCHHHHhc
Confidence 57788999999999999999975
No 351
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.07 E-value=0.00021 Score=73.89 Aligned_cols=24 Identities=17% Similarity=0.250 Sum_probs=22.0
Q ss_pred cccccceeeeehhhhhhhhCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
.+.++|+|||||++.|++||+.|.
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~~f 207 (293)
T cd07843 184 YSTAIDMWSVGCIFAELLTKKPLF 207 (293)
T ss_pred ccchhhHHHHHHHHHHHHhCCCCC
Confidence 578999999999999999999875
No 352
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.07 E-value=0.00031 Score=74.59 Aligned_cols=25 Identities=20% Similarity=0.405 Sum_probs=22.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++|||||||++.|+++|+.|.
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 192 HYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred cCCchhhhHhHHHHHHHHHHCCCCC
Confidence 4678999999999999999999885
No 353
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.07 E-value=0.00023 Score=75.12 Aligned_cols=27 Identities=37% Similarity=0.626 Sum_probs=23.9
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
...+.++|||||||++.||+||+.|..
T Consensus 184 ~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 184 GTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred CCCCCcceeecccceeeeeccCCCCCC
Confidence 456789999999999999999999953
No 354
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.06 E-value=0.00021 Score=75.22 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=47.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCCch----------hhhccC--cccccccccCC-------CCC-CCchhHH----HH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG--ELFLKDVLDQR-------LPP-PTGQLAE----AV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~--~~~~~~~~d~~-------l~~-~~~~~~~----~~ 732 (785)
..+.++|||||||++.|++||+.|... .++... +.....+.+.. +.. ......+ .-
T Consensus 182 ~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (328)
T cd07856 182 KYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNAD 261 (328)
T ss_pred CcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCC
Confidence 467899999999999999999988531 111110 00000111110 000 0000000 11
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHHH
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQE 759 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~~ 759 (785)
..+.++...|.+.+|++||++.+|+..
T Consensus 262 ~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 262 PSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 245567788999999999999998653
No 355
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=97.05 E-value=0.0002 Score=75.57 Aligned_cols=90 Identities=18% Similarity=0.170 Sum_probs=52.2
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc----------hhhhccC--cc--------cccccccCCCCCCCchhH----HHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE----------LITSLSG--EL--------FLKDVLDQRLPPPTGQLA----EAV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~----------~~~~~~~--~~--------~~~~~~d~~l~~~~~~~~----~~~ 732 (785)
..+.++||||||+++.|++||+.|.. +...... .. ...+.+...-........ ..-
T Consensus 183 ~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T cd07834 183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGAS 262 (330)
T ss_pred CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCC
Confidence 57789999999999999999998853 1111000 00 000000000000000000 001
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHH--HHHhcccc
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQ--ELSAKTQA 766 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~--~l~~~~~~ 766 (785)
..+.++...|.+.+|++||++.++++ .+++++..
T Consensus 263 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 263 PEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 23457788999999999999999987 46666554
No 356
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.03 E-value=0.00052 Score=73.94 Aligned_cols=84 Identities=24% Similarity=0.364 Sum_probs=46.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccccccccc----CCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLD----QRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d----~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
+|+-.....+.++|||||||++.||+||+.|..-... ......+.+ ....... ....+...++. .+.|...
T Consensus 217 PE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~-~~s~~~~dli~-~ll~~~~ 291 (381)
T cd05626 217 PEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP---TETQLKVINWENTLHIPPQV-KLSPEAVDLIT-KLCCSAE 291 (381)
T ss_pred HHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCH---HHHHHHHHccccccCCCCCC-CCCHHHHHHHH-HHccCcc
Confidence 3444445568899999999999999999999531100 000001111 1111100 01112222221 2458888
Q ss_pred CCCCCCChHHHHH
Q 003931 746 TPDTRPSMRFVAQ 758 (785)
Q Consensus 746 ~p~~Rp~m~~vv~ 758 (785)
+|..||+..||.+
T Consensus 292 ~~~~R~~~~~~l~ 304 (381)
T cd05626 292 ERLGRNGADDIKA 304 (381)
T ss_pred cccCCCCHHHHhc
Confidence 8888999999865
No 357
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.03 E-value=0.00013 Score=76.67 Aligned_cols=82 Identities=21% Similarity=0.243 Sum_probs=47.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+-.....+.++|||||||++.|++||+.|..-... +.....+......-+. ....+ +.++.-.|.+.+|++
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~~~~~i~~~~~~~p~-~~~~~---~~~li~~~L~~dP~~ 237 (325)
T cd05594 165 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPR-TLSPE---AKSLLSGLLKKDPKQ 237 (325)
T ss_pred HHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HHHHHHHhcCCCCCCC-CCCHH---HHHHHHHHhhcCHHH
Confidence 3444455678899999999999999999999531000 0000001001110000 01112 234556799999999
Q ss_pred CC-----ChHHHHH
Q 003931 750 RP-----SMRFVAQ 758 (785)
Q Consensus 750 Rp-----~m~~vv~ 758 (785)
|| ++.++.+
T Consensus 238 R~~~~~~~~~~il~ 251 (325)
T cd05594 238 RLGGGPDDAKEIMQ 251 (325)
T ss_pred hCCCCCCCHHHHhc
Confidence 97 7888754
No 358
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.03 E-value=0.00044 Score=75.71 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=26.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
.|+.....++.++|||||||+++|+++|+.|
T Consensus 331 PE~~~~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 331 PEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred HHHHcCCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 4555566788999999999999999998765
No 359
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.02 E-value=1.6e-05 Score=80.37 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=67.6
Q ss_pred CCcccCeeecccccc-ccCCchhc-cCCCCCCEEEccCCCCccccCccc-cCCCCCCCEEEeecCcCcc--cCCccCcCC
Q 003931 196 LCTNLSYLALAVNQL-SGGLPLSL-SNLSKLNDLGLSDNFLSGEISANL-IGNWTELESLQIQNNSFMG--NIPPEIGLL 270 (785)
Q Consensus 196 ~l~~L~~L~l~~n~i-~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~~-~~~l~~L~~L~L~~n~l~~--~~~~~~~~l 270 (785)
.+..|+++..+++.- +...-.++ .+..+|+.|.++.++--+..-... -.+++.|+.+++..+.... .+...-.++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C 371 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNC 371 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCC
Confidence 345566666655432 21212222 345667777777665322221111 2356677777777664321 122222456
Q ss_pred CCCcEEECcCcccc-cc----CChhccCCCCCCEEECcCCcccc-cCCccCcCCCCCCEEEccccc
Q 003931 271 TKLQYLFLYRNNFS-GP----IPSEIEKLTSLENLDLSGNQLSG-TIPPTLWNLTNLLSLQLFSNN 330 (785)
Q Consensus 271 ~~L~~L~L~~n~l~-~~----~p~~~~~l~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~L~L~~n~ 330 (785)
+.|+++.++++... .. ....-.....|+.+.|++++... ..-+.+..+++|+.+++.+++
T Consensus 372 ~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 372 PRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred chhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 77777777766542 11 01112335567777777775432 223345556666666665554
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=97.02 E-value=0.00017 Score=76.42 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=23.5
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
...+.|+|||||||++.|++||+.|..
T Consensus 194 ~~~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 194 NNYTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred cccCchhhHHHHHHHHHHHHhCCCCCC
Confidence 346789999999999999999999863
No 361
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.00 E-value=0.00035 Score=74.69 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=27.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+-.....+.++|||||||++.||+||+.|..
T Consensus 205 PE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 205 PEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred HHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 354445567889999999999999999999953
No 362
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=96.99 E-value=0.00016 Score=75.95 Aligned_cols=78 Identities=13% Similarity=0.281 Sum_probs=46.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.|++||+.|.+-... ......+.......+.... ..+.++...|.+.+|++
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~~~~~~~p~~~~----~~~~~li~~~l~~~p~~ 242 (323)
T cd05615 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQSIMEHNVSYPKSLS----KEAVSICKGLMTKHPSK 242 (323)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCCccCC----HHHHHHHHHHcccCHhh
Confidence 3555555678899999999999999999999531100 0001111111111111011 12345667899999999
Q ss_pred CCChH
Q 003931 750 RPSMR 754 (785)
Q Consensus 750 Rp~m~ 754 (785)
|++..
T Consensus 243 R~~~~ 247 (323)
T cd05615 243 RLGCG 247 (323)
T ss_pred CCCCC
Confidence 99853
No 363
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=96.94 E-value=0.00025 Score=74.80 Aligned_cols=75 Identities=21% Similarity=0.292 Sum_probs=42.6
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCcccccccc--cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL--DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
.+.++|||||||++.||+||+.|..-.... .....+. +..+... ...++ +.++.-.|.+.+|++||++.+
T Consensus 174 ~~~~~DvwslGvil~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~~--~~~~~---~~~li~~~L~~~P~~R~~~~~ 245 (330)
T cd05586 174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ---QMYRNIAFGKVRFPKN--VLSDE---GRQFVKGLLNRNPQHRLGAHR 245 (330)
T ss_pred CCCccceeccccEEEEeccCCCCCCCCCHH---HHHHHHHcCCCCCCCc--cCCHH---HHHHHHHHcCCCHHHCCCCCC
Confidence 578999999999999999999995311000 0000000 1111110 01111 234556799999999996554
Q ss_pred HHHHH
Q 003931 756 VAQEL 760 (785)
Q Consensus 756 vv~~l 760 (785)
.+..+
T Consensus 246 ~~~~l 250 (330)
T cd05586 246 DAVEL 250 (330)
T ss_pred CHHHH
Confidence 44333
No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=96.93 E-value=0.00022 Score=71.77 Aligned_cols=78 Identities=18% Similarity=0.197 Sum_probs=46.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|.......+.++||||||+++.|+++|+.|.+-..- ......+.......+. ... ..+.++.-.|+..+|++|
T Consensus 163 e~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~-~~~---~~l~~~i~~~l~~~p~~R 235 (250)
T cd05123 163 EVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPLRFPE-FLS---PEARDLISGLLQKDPTKR 235 (250)
T ss_pred HHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCCCCCCC-CCC---HHHHHHHHHHhcCCHhhC
Confidence 333344567899999999999999999999641110 0000111111111110 101 223466778999999999
Q ss_pred CChHH
Q 003931 751 PSMRF 755 (785)
Q Consensus 751 p~m~~ 755 (785)
|++.+
T Consensus 236 ~~~~~ 240 (250)
T cd05123 236 LGSGG 240 (250)
T ss_pred CCccc
Confidence 99965
No 365
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=96.93 E-value=0.00052 Score=70.37 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=46.4
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCc--ccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCC---
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGE--LFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRP--- 751 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp--- 751 (785)
..+.++|||||||++.|++||+.|.+-....... .......++.+.... -..+.++.-.|...+|++||
T Consensus 172 ~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------s~~~~~li~~~l~~~p~~R~~~~ 245 (278)
T cd05606 172 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF------SPELRSLLEGLLQRDVNRRLGCL 245 (278)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcC------CHHHHHHHHHHhhcCHHhccCCC
Confidence 4678999999999999999999996311100000 000011122221111 12344556789999999999
Q ss_pred --ChHHHHH
Q 003931 752 --SMRFVAQ 758 (785)
Q Consensus 752 --~m~~vv~ 758 (785)
++.|+.+
T Consensus 246 ~~~~~~ll~ 254 (278)
T cd05606 246 GRGAQEVKE 254 (278)
T ss_pred CCCHHHHHh
Confidence 8888863
No 366
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.91 E-value=0.00044 Score=72.42 Aligned_cols=25 Identities=16% Similarity=0.271 Sum_probs=22.7
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++||||+||++.|++||+.|.
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~~f 216 (317)
T cd07868 192 HYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCc
Confidence 4678999999999999999999885
No 367
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.90 E-value=0.00043 Score=71.96 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=22.9
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++||||+||++.|++||+.|.+
T Consensus 180 ~~~~~~DiwslG~il~~l~~g~~pf~ 205 (303)
T cd07869 180 EYSTCLDMWGVGCIFVEMIQGVAAFP 205 (303)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999999953
No 368
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.90 E-value=0.00036 Score=72.85 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=22.0
Q ss_pred cccccceeeeehhhhhhhhCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
.+.++|||||||++.|++||+.|.
T Consensus 186 ~~~~~DvwslG~il~el~~g~~~f 209 (309)
T cd07845 186 YTTAIDMWAVGCILAELLAHKPLL 209 (309)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCC
Confidence 578999999999999999999885
No 369
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.90 E-value=0.0006 Score=65.31 Aligned_cols=62 Identities=26% Similarity=0.286 Sum_probs=26.9
Q ss_pred CCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCC--CCcccCCccCCCCCCccEEECCCCCCc
Q 003931 27 SLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLN--ELTLEFPSFILTCRNLTYLDLSLNKLS 90 (785)
Q Consensus 27 ~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n--~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 90 (785)
.+..|+.+++.+..++... .|..+++|+.|.++.| .+.+..+-....+++|+++++++|+|.
T Consensus 41 ~~~~le~ls~~n~gltt~~--~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTLT--NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred cccchhhhhhhccceeecc--cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 3344444444444333322 3444455555555555 333333333333445555555555443
No 370
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.88 E-value=0.0002 Score=73.49 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=46.6
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|.......+.++||||||+++.|++||+.|..-..... ....+.+.....+. .. -..+..+...|.+.+|++|
T Consensus 192 e~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~-~~---~~~~~~li~~~l~~~p~~R 264 (280)
T cd05581 192 ELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---TFQKILKLEYSFPP-NF---PPDAKDLIEKLLVLDPQDR 264 (280)
T ss_pred HHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHhcCCCCCC-cc---CHHHHHHHHHHhcCCHhhC
Confidence 43344557889999999999999999999954111000 00111111111000 00 1224567788999999999
Q ss_pred CChH
Q 003931 751 PSMR 754 (785)
Q Consensus 751 p~m~ 754 (785)
|++.
T Consensus 265 ~~~~ 268 (280)
T cd05581 265 LGVN 268 (280)
T ss_pred CCcc
Confidence 9993
No 371
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.88 E-value=0.00048 Score=77.50 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=45.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc--hhhhc---cCcc----cccccccCCCCCCCchhHH----HHHHHHHHHhhcC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE--LITSL---SGEL----FLKDVLDQRLPPPTGQLAE----AVVLTINVALACT 743 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~--~~~~~---~~~~----~~~~~~d~~l~~~~~~~~~----~~~~~~~ial~C~ 743 (785)
..+.|+||||||||++||++|.-|.+ +..+. ...+ .....+++..........+ .-....++.-.|.
T Consensus 355 ~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 355 NLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 35678999999999999999887754 11111 0000 0011111111000000000 0011235677899
Q ss_pred CCCCCCCCChHHHHH
Q 003931 744 STTPDTRPSMRFVAQ 758 (785)
Q Consensus 744 ~~~p~~Rp~m~~vv~ 758 (785)
+.+|++||++.|+.+
T Consensus 435 ~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 435 RFKGRQRISAKAALA 449 (566)
T ss_pred cCCcccCCCHHHHhC
Confidence 999999999999865
No 372
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=96.87 E-value=0.00034 Score=73.90 Aligned_cols=82 Identities=17% Similarity=0.227 Sum_probs=47.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|+......+.++|||||||++.||+||+.|..-.... .....+.+....-+. ..... +.++.-.|.+.+|++
T Consensus 197 PE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~i~~~~~~~p~-~~~~~---~~~li~~~l~~dp~~ 269 (340)
T PTZ00426 197 PEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---LIYQKILEGIIYFPK-FLDNN---CKHLMKKLLSHDLTK 269 (340)
T ss_pred HHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---HHHHHHhcCCCCCCC-CCCHH---HHHHHHHHcccCHHH
Confidence 35444555678999999999999999999995311000 000111111110000 11111 234566799999999
Q ss_pred CC-----ChHHHHH
Q 003931 750 RP-----SMRFVAQ 758 (785)
Q Consensus 750 Rp-----~m~~vv~ 758 (785)
|+ ++.++.+
T Consensus 270 R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 270 RYGNLKKGAQNVKE 283 (340)
T ss_pred cCCCCCCCHHHHHc
Confidence 95 6777644
No 373
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.85 E-value=0.00031 Score=72.08 Aligned_cols=76 Identities=13% Similarity=0.186 Sum_probs=45.4
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccc---cccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCC-
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKD---VLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRP- 751 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~---~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp- 751 (785)
...+.++|||||||++.|++||+.|..-.... ......+ ..++.+.. ....+ +.++...|...+|++||
T Consensus 171 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~---~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 171 TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-DKHEIDRMTLTVNVELPD---SFSPE---LKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc-CHHHHHHHhhcCCcCCcc---ccCHH---HHHHHHHHhcCCHHHhcC
Confidence 34678999999999999999999995311100 0000000 11112211 11122 33445689999999999
Q ss_pred ----ChHHHHH
Q 003931 752 ----SMRFVAQ 758 (785)
Q Consensus 752 ----~m~~vv~ 758 (785)
+++|+.+
T Consensus 244 ~~~~~~~~~~~ 254 (279)
T cd05633 244 CLGRGAQEVKE 254 (279)
T ss_pred CCCCCHHHHHh
Confidence 5888765
No 374
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.85 E-value=0.00064 Score=74.55 Aligned_cols=82 Identities=17% Similarity=0.168 Sum_probs=47.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc-------hhhhcc--Ccccc--cccccCC-----CCCCCch-hHH-----HHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE-------LITSLS--GELFL--KDVLDQR-----LPPPTGQ-LAE-----AVVL 734 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~-------~~~~~~--~~~~~--~~~~d~~-----l~~~~~~-~~~-----~~~~ 734 (785)
..+.++|||||||++.||+||+.|.. +...+. ..... ....++. ....... ... .-..
T Consensus 247 ~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 326 (440)
T PTZ00036 247 NYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDD 326 (440)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHH
Confidence 56889999999999999999998853 111100 00000 0001110 0000000 000 0123
Q ss_pred HHHHHhhcCCCCCCCCCChHHHHH
Q 003931 735 TINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 735 ~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
+.++.-.|...+|++||+..|+.+
T Consensus 327 ~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 327 AINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHHHCCCChhHCcCHHHHhC
Confidence 556778899999999999999874
No 375
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.85 E-value=0.00088 Score=70.68 Aligned_cols=79 Identities=18% Similarity=0.321 Sum_probs=43.9
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccC----CCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQ----RLPPPTGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~----~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
..+.++|||||||++.|++||+.|..-..... ....+... ...........++..+++ .+.|..+.+..||+
T Consensus 184 ~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~---~~~~i~~~~~~~~~p~~~~~~s~~~~~li~-~ll~~~~~r~~r~~ 259 (332)
T cd05623 184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVE---TYGKIMNHKERFQFPAQVTDVSEDAKDLIR-RLICSREHRLGQNG 259 (332)
T ss_pred CCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH---HHHHHhCCCccccCCCccccCCHHHHHHHH-HHccChhhhcCCCC
Confidence 46789999999999999999999953110000 00001000 010000011123333333 35587777777899
Q ss_pred hHHHHHH
Q 003931 753 MRFVAQE 759 (785)
Q Consensus 753 m~~vv~~ 759 (785)
+.|+.+.
T Consensus 260 ~~~~~~h 266 (332)
T cd05623 260 IEDFKQH 266 (332)
T ss_pred HHHHhCC
Confidence 9888543
No 376
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.83 E-value=0.00049 Score=73.71 Aligned_cols=26 Identities=31% Similarity=0.521 Sum_probs=23.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++|||||||++.|++||+.|..
T Consensus 223 ~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 223 YYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred CCCCceeeeehhHHHHHHHhCCCCcC
Confidence 46789999999999999999999953
No 377
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=96.82 E-value=0.00087 Score=70.65 Aligned_cols=80 Identities=23% Similarity=0.360 Sum_probs=44.4
Q ss_pred cccccccceeeeehhhhhhhhCCCCCch---hhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGEL---ITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
...+.++|||||||++.|++||+.|..- ......-....+..+ +........+++..+++ .+.|....|..||+
T Consensus 183 ~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~li~-~ll~~~~~r~~r~~ 259 (331)
T cd05597 183 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ--FPPDVTDVSEEAKDLIR-RLICSPETRLGRNG 259 (331)
T ss_pred cCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc--CCCccCCCCHHHHHHHH-HHccCcccccCCCC
Confidence 3467899999999999999999999531 111000000000010 10000011123333443 35587778888999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
+.++..
T Consensus 260 ~~~~l~ 265 (331)
T cd05597 260 LQDFKD 265 (331)
T ss_pred HHHHhc
Confidence 988865
No 378
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.82 E-value=0.0003 Score=74.27 Aligned_cols=82 Identities=21% Similarity=0.237 Sum_probs=47.1
Q ss_pred ccccccceeeeehhhhhhhhCCCCCch----------hhhccC--cccccccccCC-------CCC-CCchhH----HHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGEL----------ITSLSG--ELFLKDVLDQR-------LPP-PTGQLA----EAV 732 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~----------~~~~~~--~~~~~~~~d~~-------l~~-~~~~~~----~~~ 732 (785)
..+.++|||||||++.|+++|+.|.+- +..... +....++.++. ... +..... ..-
T Consensus 186 ~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (332)
T cd07857 186 SYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNAN 265 (332)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCC
Confidence 467899999999999999999988531 000000 00000111100 000 000000 001
Q ss_pred HHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 733 VLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 733 ~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
..+.++...|.+.+|++||++.|+++
T Consensus 266 ~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 266 PLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhc
Confidence 24557788999999999999999864
No 379
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=96.81 E-value=0.00081 Score=69.31 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=22.9
Q ss_pred cccccccceeeeehhhhhhhhCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
...+.++||||+||++.|++||+.|.
T Consensus 179 ~~~~~~~DiwslG~~l~~l~~g~~pf 204 (288)
T cd07871 179 TEYSTPIDMWGVGCILYEMATGRPMF 204 (288)
T ss_pred cccCcHHHHHHHHHHHHHHHhCCCCC
Confidence 34578899999999999999999884
No 380
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=96.76 E-value=0.0012 Score=70.01 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=58.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhh--CCCCCc-hh-hhccCcccccccccCC-CCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMM--GRHPGE-LI-TSLSGELFLKDVLDQR-LPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLEllt--gk~p~~-~~-~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
|--.-++.|+++|||.|||-+.|+++ ..+|.. +. +.+. +...++++.. ..........|-..++++.+.|+..
T Consensus 709 EsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv--en~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~ 786 (807)
T KOG1094|consen 709 ESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV--ENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRR 786 (807)
T ss_pred HHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH--HhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhch
Confidence 44556899999999999999999987 466742 10 0000 0111222211 0000001123455677999999999
Q ss_pred CCCCCCChHHHHHHHHhc
Q 003931 746 TPDTRPSMRFVAQELSAK 763 (785)
Q Consensus 746 ~p~~Rp~m~~vv~~l~~~ 763 (785)
+.++||+..++..-|++.
T Consensus 787 es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 787 ESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhcCCCHHHHHHHHHHh
Confidence 999999999999888763
No 381
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=96.72 E-value=0.00066 Score=67.68 Aligned_cols=71 Identities=18% Similarity=0.243 Sum_probs=43.2
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
....+.++||||+||++.|++||+.|.+.... .........+... ... .+.++.-.|.+.+|++||+++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~-----~~~~~~~~~~~~~---~~~---~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPS-----GINTHTTLNIPEW---VSE---EARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCch-----hcccccccCCccc---CCH---HHHHHHHHHccCCHHHhcCCC
Confidence 34567899999999999999999977431100 0000001111110 011 233456679999999999986
Q ss_pred HH
Q 003931 755 FV 756 (785)
Q Consensus 755 ~v 756 (785)
++
T Consensus 225 ~~ 226 (237)
T cd05576 225 VA 226 (237)
T ss_pred cc
Confidence 55
No 382
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.66 E-value=0.00039 Score=71.74 Aligned_cols=68 Identities=18% Similarity=0.296 Sum_probs=40.0
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCcccc-cccc--cCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFL-KDVL--DQRLPPPTGQLAEAVVLTINVALACTSTTPDTRP 751 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~-~~~~--d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp 751 (785)
.+.++|||||||++.|++||+.|.+........... ..+. ++.... . .-..+..+...|.+.+|++||
T Consensus 185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~ll~~~l~~~p~~R~ 255 (290)
T cd05613 185 HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ---E---MSALAKDIIQRLLMKDPKKRL 255 (290)
T ss_pred CCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCc---c---CCHHHHHHHHHHhcCCHHHhc
Confidence 467899999999999999999996421110000000 0111 111110 0 112344667889999999998
No 383
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.64 E-value=0.00095 Score=71.81 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=27.3
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+......+.++|||||||++.||+||+.|..
T Consensus 213 PE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 245 (376)
T cd05598 213 PEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL 245 (376)
T ss_pred HHHHcCCCCCcceeeeeccceeeehhhCCCCCC
Confidence 355455567889999999999999999999953
No 384
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.64 E-value=0.001 Score=63.75 Aligned_cols=84 Identities=31% Similarity=0.409 Sum_probs=44.2
Q ss_pred CCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCC--CCcccCCccccCCCCCcEEEcCCCcccccCCcC---CCCC
Q 003931 75 TCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTEN--QFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGD---IGSM 149 (785)
Q Consensus 75 ~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n--~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~---l~~l 149 (785)
....|+.+.+.+..++ .+.. |..+++|++|.++.| ++.+..+.-...+++|+++++++|++.. +.. +..+
T Consensus 41 ~~~~le~ls~~n~glt-t~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l 115 (260)
T KOG2739|consen 41 EFVELELLSVINVGLT-TLTN--FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKEL 115 (260)
T ss_pred cccchhhhhhhcccee-eccc--CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhh
Confidence 3345555555555544 2221 355666777777776 4444444444455666666666666652 112 2344
Q ss_pred CCCCEEEcccCccc
Q 003931 150 SNLQLVELFNNSFT 163 (785)
Q Consensus 150 ~~L~~L~L~~n~~~ 163 (785)
.+|..|++.+|..+
T Consensus 116 ~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 116 ENLKSLDLFNCSVT 129 (260)
T ss_pred cchhhhhcccCCcc
Confidence 45555555555444
No 385
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.64 E-value=0.00051 Score=72.83 Aligned_cols=26 Identities=23% Similarity=0.434 Sum_probs=23.4
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++|||||||++.|+++|+.|..
T Consensus 192 ~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 192 HYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 46789999999999999999999853
No 386
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.62 E-value=0.00019 Score=80.22 Aligned_cols=189 Identities=22% Similarity=0.146 Sum_probs=93.8
Q ss_pred cCCCCCCEEeCCCCC-CCCCC-ccccCCCCCCcEEEccCC-CCcccC----CccCCCCCCccEEECCCCC-CcccCChhh
Q 003931 26 SSLRKVRYLDLGGNF-LETPD-WSKFSSMPSLTHLGLYLN-ELTLEF----PSFILTCRNLTYLDLSLNK-LSGLIPERL 97 (785)
Q Consensus 26 ~~l~~L~~L~L~~n~-i~~~~-~~~f~~l~~L~~L~L~~n-~i~~~~----~~~~~~l~~L~~L~Ls~n~-i~~~~~~~~ 97 (785)
..++.|+.+.+.++. +.... ......+++|+.|+++++ ...... ......+++|+.|+++++. +++..-..+
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 346777777777663 33211 123456677777777762 111111 1233456777778887776 443322333
Q ss_pred hcCCCCCcEEECCCCC-CcccCC-ccccCCCCCcEEEcCCCccccc--CCcCCCCCCCCCEEEcccCcccccCCccccCC
Q 003931 98 FTNLGKLEYLNLTENQ-FQGKLS-PNVSKLSNLIDLRLATNKFSGP--IPGDIGSMSNLQLVELFNNSFTGQIPSSLGQL 173 (785)
Q Consensus 98 f~~l~~L~~L~Ls~n~-i~~~~~-~~~~~l~~L~~L~L~~n~~~~~--~~~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l 173 (785)
...+++|++|.+.++. ++...- .....+++|+.|+++++..... +.....++++++.+.+....- +
T Consensus 265 ~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~----------c 334 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG----------C 334 (482)
T ss_pred HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC----------C
Confidence 2347778888766665 443222 2234567788888887664311 111233456665554433221 2
Q ss_pred CCCCEEEcccCcCc---ccCCccccCCcccCeeeccccccccCC-chhccCCCCC
Q 003931 174 KNLQHLDLRMNALN---YTIPPELGLCTNLSYLALAVNQLSGGL-PLSLSNLSKL 224 (785)
Q Consensus 174 ~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L 224 (785)
+.++.+.+...... .........++.++.+.+..+.+.... ...+.+++.|
T Consensus 335 ~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 335 PSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred ccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 33333333332211 122223455666777766666633222 2334445544
No 387
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.57 E-value=0.0011 Score=70.40 Aligned_cols=25 Identities=24% Similarity=0.449 Sum_probs=22.6
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.|+|||||||++.|++||+.|.
T Consensus 194 ~~~~~~DvwslG~il~el~~g~~pf 218 (345)
T cd07877 194 HYNQTVDIWSVGCIMAELLTGRTLF 218 (345)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCC
Confidence 4577999999999999999999885
No 388
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=96.53 E-value=0.0015 Score=69.88 Aligned_cols=33 Identities=27% Similarity=0.516 Sum_probs=27.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+......+.++|||||||++.||+||+.|..
T Consensus 208 PE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 208 PEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred HHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 355455567899999999999999999999953
No 389
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.51 E-value=0.00067 Score=70.03 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=42.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTR 750 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~R 750 (785)
|+......+.++|||||||++.|++||+.|..-..... ....+.+....-+. .... .+.++.-.|+..+|.+|
T Consensus 168 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~-~~~~---~l~~li~~~l~~~p~~R 240 (290)
T cd05580 168 EIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---IYEKILEGKVRFPS-FFSP---DAKDLIRNLLQVDLTKR 240 (290)
T ss_pred hhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhcCCccCCc-cCCH---HHHHHHHHHccCCHHHc
Confidence 43334456789999999999999999999953111100 00111111111010 1111 23355677999999999
Q ss_pred C
Q 003931 751 P 751 (785)
Q Consensus 751 p 751 (785)
|
T Consensus 241 ~ 241 (290)
T cd05580 241 L 241 (290)
T ss_pred c
Confidence 9
No 390
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=96.50 E-value=0.0018 Score=69.91 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=27.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+......+.++|||||||++.||+||+.|..
T Consensus 217 PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (382)
T cd05625 217 PEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFL 249 (382)
T ss_pred HHHhcCCCCCCeeeEEechHHHHHHHhCCCCCC
Confidence 354445567789999999999999999999953
No 391
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=96.49 E-value=0.0025 Score=67.16 Aligned_cols=26 Identities=31% Similarity=0.589 Sum_probs=23.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++|||||||++.||+||+.|..
T Consensus 184 ~~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 184 KYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCCCcccEEeeehhhhhhhhCCCCcc
Confidence 45789999999999999999999953
No 392
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.30 E-value=0.0038 Score=64.11 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=49.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCccc----ccccccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELF----LKDVLDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
+|+-...-...|+|+||.|+...||.+|..|.- +.. +.+ +.+--=|.+.+..... +=+..-.|...
T Consensus 180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s--~~h--PmrvlflIpk~~PP~L~~~~S~~------~kEFV~~CL~k 249 (467)
T KOG0201|consen 180 PEVIKQSGYDTKADIWSLGITAIELAKGEPPHS--KLH--PMRVLFLIPKSAPPRLDGDFSPP------FKEFVEACLDK 249 (467)
T ss_pred hhhhccccccchhhhhhhhHHHHHHhcCCCCCc--ccC--cceEEEeccCCCCCccccccCHH------HHHHHHHHhhc
Confidence 355555566899999999999999999999832 110 111 1111223333322121 22334469999
Q ss_pred CCCCCCChHHHHH
Q 003931 746 TPDTRPSMRFVAQ 758 (785)
Q Consensus 746 ~p~~Rp~m~~vv~ 758 (785)
+|+.||+..+..+
T Consensus 250 ~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 250 NPEFRPSAKELLK 262 (467)
T ss_pred CcccCcCHHHHhh
Confidence 9999999998754
No 393
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.21 E-value=0.0023 Score=68.43 Aligned_cols=32 Identities=28% Similarity=0.536 Sum_probs=26.8
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-.....+.++|||||||++.||+||+.|.
T Consensus 205 PE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 205 PEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred HHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 35444556788999999999999999999995
No 394
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.20 E-value=0.00018 Score=68.92 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=14.0
Q ss_pred CCCCCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCC
Q 003931 27 SLRKVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNE 64 (785)
Q Consensus 27 ~l~~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~ 64 (785)
+++.|++|.||-|+|+.+. .|..|++|+.|.|..|.
T Consensus 39 kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~ 74 (388)
T KOG2123|consen 39 KMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNC 74 (388)
T ss_pred hcccceeEEeeccccccch--hHHHHHHHHHHHHHhcc
Confidence 3344444444444443332 23333444444444333
No 395
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.20 E-value=0.0023 Score=71.36 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=24.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
|+-.....+.++|||||||+++||++|+.|
T Consensus 338 E~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 338 EILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 444445678899999999999999999743
No 396
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.19 E-value=0.0037 Score=66.94 Aligned_cols=26 Identities=31% Similarity=0.521 Sum_probs=23.5
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+.++|||||||++.||+||+.|..
T Consensus 223 ~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 223 YYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred cCCCccceeehhHHHHHHHhCCCCCC
Confidence 36789999999999999999999964
No 397
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.14 E-value=0.0041 Score=66.93 Aligned_cols=32 Identities=25% Similarity=0.538 Sum_probs=26.9
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-.....+.++|||||||++.|++||+.|.
T Consensus 217 PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf 248 (377)
T cd05629 217 PEIFLQQGYGQECDWWSLGAIMFECLIGWPPF 248 (377)
T ss_pred HHHHccCCCCCceeeEecchhhhhhhcCCCCC
Confidence 35544556789999999999999999999995
No 398
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=96.11 E-value=0.005 Score=65.93 Aligned_cols=25 Identities=32% Similarity=0.604 Sum_probs=22.9
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
..+.++||||+||++.||+||+.|.
T Consensus 223 ~~~~~~DiwSlG~ilyell~G~~Pf 247 (370)
T cd05621 223 YYGRECDWWSVGVFLFEMLVGDTPF 247 (370)
T ss_pred CCCcccCEEeehHHHHHHHhCCCCC
Confidence 3678999999999999999999995
No 399
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=96.07 E-value=0.0021 Score=65.21 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=26.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
|+-.....+.++|||||||++.|++||+.|..
T Consensus 179 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 210 (264)
T cd06653 179 EVISGEGYGRKADVWSVACTVVEMLTEKPPWA 210 (264)
T ss_pred hhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 44444566789999999999999999999953
No 400
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.07 E-value=0.00055 Score=76.53 Aligned_cols=173 Identities=22% Similarity=0.139 Sum_probs=83.1
Q ss_pred CCCccEEECCCCCCcccC-ChhhhcCCCCCcEEECCCC-CCcccC----CccccCCCCCcEEEcCCCc-ccccCCcCCC-
Q 003931 76 CRNLTYLDLSLNKLSGLI-PERLFTNLGKLEYLNLTEN-QFQGKL----SPNVSKLSNLIDLRLATNK-FSGPIPGDIG- 147 (785)
Q Consensus 76 l~~L~~L~Ls~n~i~~~~-~~~~f~~l~~L~~L~Ls~n-~i~~~~----~~~~~~l~~L~~L~L~~n~-~~~~~~~~l~- 147 (785)
++.|+.+.+.++.-.... -..+...+++|+.|+++++ ...... ......+++|+.|+++++. ++...-..++
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 566666666666322111 1123356677777777652 111111 1233445677777777766 4433222222
Q ss_pred CCCCCCEEEcccCc-ccccC-CccccCCCCCCEEEcccCcCcc--cCCccccCCcccCeeeccccccccCCchhccCCCC
Q 003931 148 SMSNLQLVELFNNS-FTGQI-PSSLGQLKNLQHLDLRMNALNY--TIPPELGLCTNLSYLALAVNQLSGGLPLSLSNLSK 223 (785)
Q Consensus 148 ~l~~L~~L~L~~n~-~~~~~-~~~l~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 223 (785)
.+++|++|.+.+|. ++... -.....++.|++|+++++.... .+.....++++++.+.+.... .+..
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~----------~c~~ 336 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN----------GCPS 336 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------CCcc
Confidence 26777777766665 33221 1123456678888887765421 111223345555554433221 1333
Q ss_pred CCEEEccCCCCcc--ccCccccCCCCCCCEEEeecCc
Q 003931 224 LNDLGLSDNFLSG--EISANLIGNWTELESLQIQNNS 258 (785)
Q Consensus 224 L~~L~L~~n~l~~--~~~~~~~~~l~~L~~L~L~~n~ 258 (785)
++.+.+....-.. .........+++++.+.+..+.
T Consensus 337 l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 337 LTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCG 373 (482)
T ss_pred HHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhh
Confidence 3444433332211 1222224566677777776666
No 401
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.68 E-value=0.0053 Score=66.51 Aligned_cols=70 Identities=27% Similarity=0.408 Sum_probs=44.1
Q ss_pred ccccceeeeehhhhhhhhCCCCCc-hhhhccCcccc----cccccCCCCCCCchhHHHH-HHHHHHHhhcCCCCCCCCCC
Q 003931 679 TDKCDVFSFGVVALEVMMGRHPGE-LITSLSGELFL----KDVLDQRLPPPTGQLAEAV-VLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 679 t~k~DVYSfGvvlLElltgk~p~~-~~~~~~~~~~~----~~~~d~~l~~~~~~~~~~~-~~~~~ial~C~~~~p~~Rp~ 752 (785)
-..+|+||||+-..||.|||.|.- +.. .+..+ +--+.|.+. +++ .+.-...+.|-.++|.+||+
T Consensus 756 G~aADIWS~GCT~vEMATGrPPF~Elgs---pqAAMFkVGmyKvHP~iP-------eelsaeak~FilrcFepd~~~R~s 825 (1226)
T KOG4279|consen 756 GKAADIWSFGCTMVEMATGRPPFVELGS---PQAAMFKVGMYKVHPPIP-------EELSAEAKNFILRCFEPDPCDRPS 825 (1226)
T ss_pred CchhhhhhccceeEeeccCCCCeeecCC---hhHhhhhhcceecCCCCc-------HHHHHHHHHHHHHHcCCCcccCcc
Confidence 345799999999999999999941 100 00000 011222221 122 22334578999999999999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
.++.++
T Consensus 826 A~~LL~ 831 (1226)
T KOG4279|consen 826 AKDLLQ 831 (1226)
T ss_pred HHHhcc
Confidence 999855
No 402
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.62 E-value=0.0041 Score=72.37 Aligned_cols=21 Identities=38% Similarity=0.749 Sum_probs=19.3
Q ss_pred ccceeeeehhhhhhhhCCCCC
Q 003931 681 KCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 681 k~DVYSfGvvlLElltgk~p~ 701 (785)
..||||.|+|++||+|||||.
T Consensus 1421 A~DiWslGCVVlEM~tGkrPW 1441 (1509)
T KOG4645|consen 1421 AADIWSLGCVVLEMATGKRPW 1441 (1509)
T ss_pred chhhhcccceEEEeecCCCch
Confidence 469999999999999999994
No 403
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.47 E-value=0.0072 Score=57.82 Aligned_cols=77 Identities=18% Similarity=0.305 Sum_probs=51.4
Q ss_pred ccccceeeeehhhhhhhhCCCCCchhhhccCcc---cccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 679 TDKCDVFSFGVVALEVMMGRHPGELITSLSGEL---FLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 679 t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
-..+|.|||.|++-|+.|..-|. ..|-..+- ...|=+.+.+.+. .... +.++.-.|-.++|.+||....
T Consensus 367 ~raadmwsfaillwel~trevpf--adlspmecgmkialeglrv~ippg---is~h---m~klm~icmnedpgkrpkfdm 438 (448)
T KOG0195|consen 367 IRAADMWSFAILLWELNTREVPF--ADLSPMECGMKIALEGLRVHIPPG---ISRH---MNKLMNICMNEDPGKRPKFDM 438 (448)
T ss_pred hhhhhHHHHHHHHHHhhcccccc--ccCCchhhhhhhhhccccccCCCC---ccHH---HHHHHHHHhcCCCCcCCCcce
Confidence 35789999999999999999884 33322211 1123334444321 1122 345556799999999999999
Q ss_pred HHHHHHhc
Q 003931 756 VAQELSAK 763 (785)
Q Consensus 756 vv~~l~~~ 763 (785)
||-.|+++
T Consensus 439 ivpilekm 446 (448)
T KOG0195|consen 439 IVPILEKM 446 (448)
T ss_pred ehhhHHHh
Confidence 99888765
No 404
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.42 E-value=0.016 Score=62.74 Aligned_cols=65 Identities=18% Similarity=0.403 Sum_probs=40.8
Q ss_pred cccceeeeehhhhhhhhCCCCCc------hhhhccCcccccccccCCCCCC-CchhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGE------LITSLSGELFLKDVLDQRLPPP-TGQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~------~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
.++||||-||||..++||+-|.| +..-|++.. ++ +... ..+..+-+.+| .+.+|+.|-|
T Consensus 191 ~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~-----f~--MPs~Is~eaQdLLr~m-------l~VDp~~RiT 256 (786)
T KOG0588|consen 191 RPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV-----FE--MPSNISSEAQDLLRRM-------LDVDPSTRIT 256 (786)
T ss_pred CccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc-----cc--CCCcCCHHHHHHHHHH-------hccCcccccc
Confidence 58999999999999999999976 333343321 11 1110 11111222233 4568999999
Q ss_pred hHHHHH
Q 003931 753 MRFVAQ 758 (785)
Q Consensus 753 m~~vv~ 758 (785)
|+||.+
T Consensus 257 ~~eI~k 262 (786)
T KOG0588|consen 257 TEEILK 262 (786)
T ss_pred HHHHhh
Confidence 999865
No 405
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=95.35 E-value=0.013 Score=56.46 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=42.5
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCccccccccc---CCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLD---QRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
..-.+|||||||-+.|+.||+-|...-.- .-+-...|++ |.+.+..+.. -...+..-.|...++.+||.-.
T Consensus 271 YDiRaDVWSlGITlveLaTg~yPy~~c~t--dFe~ltkvln~ePP~L~~~~gFS----p~F~~fv~~CL~kd~r~RP~Y~ 344 (391)
T KOG0983|consen 271 YDIRADVWSLGITLVELATGQYPYKGCKT--DFEVLTKVLNEEPPLLPGHMGFS----PDFQSFVKDCLTKDHRKRPKYN 344 (391)
T ss_pred cchhhhhhhhccchhhhhcccCCCCCCCc--cHHHHHHHHhcCCCCCCcccCcC----HHHHHHHHHHhhcCcccCcchH
Confidence 34579999999999999999999531000 0000112222 2332211111 1233455679999999999765
Q ss_pred HH
Q 003931 755 FV 756 (785)
Q Consensus 755 ~v 756 (785)
+.
T Consensus 345 ~L 346 (391)
T KOG0983|consen 345 KL 346 (391)
T ss_pred HH
Confidence 54
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=95.15 E-value=0.0088 Score=57.82 Aligned_cols=45 Identities=22% Similarity=0.410 Sum_probs=38.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
..+.+.|+|++|++++|+ ..+.++...|.+.+|++||++.++
T Consensus 170 ~~~~~~D~~~lg~~~~~l--------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l 211 (215)
T cd00180 170 YYSEKSDIWSLGVILYEL--------------------------------------PELKDLIRKMLQKDPEKRPSAKEI 211 (215)
T ss_pred CCCchhhhHHHHHHHHHH--------------------------------------HHHHHHHHHHhhCCcccCcCHHHH
Confidence 667889999999999998 234566778999999999999998
Q ss_pred HHH
Q 003931 757 AQE 759 (785)
Q Consensus 757 v~~ 759 (785)
++.
T Consensus 212 ~~~ 214 (215)
T cd00180 212 LEH 214 (215)
T ss_pred hhC
Confidence 764
No 407
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=94.98 E-value=0.021 Score=64.06 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=58.9
Q ss_pred hhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCC-chhHHHHHHHHHHHhhcCCCCCCCCCC
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPT-GQLAEAVVLTINVALACTSTTPDTRPS 752 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~ial~C~~~~p~~Rp~ 752 (785)
...-+++|+|+|+.||+|.-|.-...|.+ +..-..|++....-+. ....+++. .+...|.+++|++||+
T Consensus 231 sg~pI~eKsDIWALGclLYkLCy~t~PFe-------~sg~laIlng~Y~~P~~p~ys~~l~---~LI~~mL~~nP~~RPn 300 (738)
T KOG1989|consen 231 SGLPIGEKSDIWALGCLLYKLCYFTTPFE-------ESGKLAILNGNYSFPPFPNYSDRLK---DLIRTMLQPNPDERPN 300 (738)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHhCCCcC-------cCcceeEEeccccCCCCccHHHHHH---HHHHHHhccCcccCCC
Confidence 34557899999999999999999999953 1112345555543222 12223333 4456799999999999
Q ss_pred hHHHHHHHHhcccc
Q 003931 753 MRFVAQELSAKTQA 766 (785)
Q Consensus 753 m~~vv~~l~~~~~~ 766 (785)
+-+|+..+.++...
T Consensus 301 I~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 301 IYQVLEEIFELANK 314 (738)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999998877654
No 408
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.97 E-value=0.015 Score=61.44 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=43.6
Q ss_pred ccccceeeeehhhhhhhhCCCCCch------hhhccC-cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCC
Q 003931 679 TDKCDVFSFGVVALEVMMGRHPGEL------ITSLSG-ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRP 751 (785)
Q Consensus 679 t~k~DVYSfGvvlLElltgk~p~~~------~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp 751 (785)
..++||||+||+|.-|++|+-|.+- ...... +-.+.+.++ . ..+..+.-.|...+|.+|+
T Consensus 201 g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~---------S----~~~~~Li~~mL~~~P~~R~ 267 (370)
T KOG0583|consen 201 GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL---------S----PEARSLIEKMLVPDPSTRI 267 (370)
T ss_pred CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC---------C----HHHHHHHHHHcCCCcccCC
Confidence 4789999999999999999999651 000000 111111111 1 1233456678999999999
Q ss_pred ChHHHH
Q 003931 752 SMRFVA 757 (785)
Q Consensus 752 ~m~~vv 757 (785)
++.|+.
T Consensus 268 t~~~i~ 273 (370)
T KOG0583|consen 268 TLLEIL 273 (370)
T ss_pred CHHHHh
Confidence 999997
No 409
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.97 E-value=0.02 Score=55.52 Aligned_cols=86 Identities=19% Similarity=0.103 Sum_probs=50.4
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
+|.-.....+.|+||||.|+|+.||..=+.|..--.+..-..++...--|.+. .+.---.+-+++-.|.+.+|+.
T Consensus 197 PE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p-----~~~YS~~l~~li~~ci~vd~~~ 271 (375)
T KOG0591|consen 197 PERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP-----DEHYSTDLRELINMCIAVDPEQ 271 (375)
T ss_pred HHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc-----HHHhhhHHHHHHHHHccCCccc
Confidence 35556677789999999999999999999985300000000111111011111 0111123456677899999999
Q ss_pred CCChHHHHHHH
Q 003931 750 RPSMRFVAQEL 760 (785)
Q Consensus 750 Rp~m~~vv~~l 760 (785)
||+....|+.+
T Consensus 272 RP~t~~~v~di 282 (375)
T KOG0591|consen 272 RPDTVPYVQDI 282 (375)
T ss_pred CCCcchHHHHH
Confidence 99965444444
No 410
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.89 E-value=0.012 Score=63.45 Aligned_cols=68 Identities=21% Similarity=0.322 Sum_probs=44.8
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc-------hhhhccC---cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE-------LITSLSG---ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTST 745 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~-------~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~ 745 (785)
-...+..||||||+=+|||+|+.=|.. +-+-|-+ +..+..|=||. |-++.-.|...
T Consensus 218 E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPe--------------vr~fIekCl~~ 283 (632)
T KOG0584|consen 218 ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPE--------------VREFIEKCLAT 283 (632)
T ss_pred hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHH--------------HHHHHHHHhcC
Confidence 456789999999999999999988843 2222222 12222333332 22445568888
Q ss_pred CCCCCCChHHHHH
Q 003931 746 TPDTRPSMRFVAQ 758 (785)
Q Consensus 746 ~p~~Rp~m~~vv~ 758 (785)
.++||+..|.++
T Consensus 284 -~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 284 -KSERLSAKELLK 295 (632)
T ss_pred -chhccCHHHHhh
Confidence 889999998754
No 411
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=94.75 E-value=0.019 Score=58.15 Aligned_cols=35 Identities=23% Similarity=0.500 Sum_probs=28.2
Q ss_pred CCCchhhhhhhcccccccceeeeehhhhhhhhCCC
Q 003931 665 SDNELTELAVTMRVTDKCDVFSFGVVALEVMMGRH 699 (785)
Q Consensus 665 ~~n~l~e~~~~~~~t~k~DVYSfGvvlLElltgk~ 699 (785)
.+.+-+|+-.+.--+..|||||+|+||.|+.||..
T Consensus 273 RHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~ 307 (415)
T KOG0671|consen 273 RHYRAPEVILGLGWSQPCDVWSIGCILVELYTGET 307 (415)
T ss_pred cccCCchheeccCcCCccCceeeeeEEEEeeccce
Confidence 34455676666677899999999999999999964
No 412
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=94.72 E-value=0.0074 Score=57.81 Aligned_cols=78 Identities=19% Similarity=0.136 Sum_probs=46.0
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCccccccc--ccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDV--LDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
..-++||||.||-|.|+.||+-|.+ +|-.--+.+..| =||..........+--..+....-.|+-.+-..||.-.+
T Consensus 246 yDiRSDvWSLGITL~EvAtG~fPyr--~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~ 323 (361)
T KOG1006|consen 246 YDIRSDVWSLGITLYEVATGNFPYR--KWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDD 323 (361)
T ss_pred cchhhhhhhhcceEeeeecCCCCcc--hHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhh
Confidence 3467999999999999999999964 221100001111 122221111111112234556667899999999999877
Q ss_pred HH
Q 003931 756 VA 757 (785)
Q Consensus 756 vv 757 (785)
..
T Consensus 324 Lk 325 (361)
T KOG1006|consen 324 LK 325 (361)
T ss_pred hh
Confidence 53
No 413
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.69 E-value=0.011 Score=63.46 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=44.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc--hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE--LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~--~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+....--+-.+||||.|||+.-|++||.|-+ -++-....-...+..=|.- -..... .+.-.-.+.+|.
T Consensus 188 EVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~---ls~~A~------dLI~~lL~~~P~ 258 (592)
T KOG0575|consen 188 EVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSH---LSAEAK------DLIRKLLRPNPS 258 (592)
T ss_pred hHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccc---cCHHHH------HHHHHHhcCCcc
Confidence 44444445667899999999999999999964 1111000000111111111 011111 222234689999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+||+..+|+.
T Consensus 259 ~Rpsl~~vL~ 268 (592)
T KOG0575|consen 259 ERPSLDEVLD 268 (592)
T ss_pred cCCCHHHHhc
Confidence 9999999975
No 414
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=94.48 E-value=0.016 Score=67.25 Aligned_cols=69 Identities=20% Similarity=0.290 Sum_probs=42.1
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc-----hhhhccCcccc---cccccCCCCCCCchhHHHHHHHHHHHhhcCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE-----LITSLSGELFL---KDVLDQRLPPPTGQLAEAVVLTINVALACTSTTP 747 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~-----~~~~~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p 747 (785)
.+.+.|.|.||.|||++||+-- -+|. ...-.+. +.+ .+..|++. ..-..+.-+-++.+|
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~yP-F~TsMERa~iL~~LR~-g~iP~~~~f~~~~~-----------~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLYP-FGTSMERASILTNLRK-GSIPEPADFFDPEH-----------PEEASLIRWLLSHDP 859 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhcc-CCchHHHHHHHHhccc-CCCCCCcccccccc-----------hHHHHHHHHHhcCCC
Confidence 3689999999999999999965 3332 1111121 111 12223222 122233445678999
Q ss_pred CCCCChHHHH
Q 003931 748 DTRPSMRFVA 757 (785)
Q Consensus 748 ~~Rp~m~~vv 757 (785)
.+|||..|+.
T Consensus 860 ~kRPtA~eLL 869 (1351)
T KOG1035|consen 860 SKRPTATELL 869 (1351)
T ss_pred ccCCCHHHHh
Confidence 9999999875
No 415
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.44 E-value=0.024 Score=60.35 Aligned_cols=80 Identities=20% Similarity=0.306 Sum_probs=48.2
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc-----hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE-----LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTS 744 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~-----~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~ 744 (785)
+|.......-.|.||||+|+++.||+-|..|.= -+-|. +..---|++.... ....+. =+.--.|..
T Consensus 438 PEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL-----Ia~ng~P~lk~~~-klS~~~---kdFL~~cL~ 508 (550)
T KOG0578|consen 438 PEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----IATNGTPKLKNPE-KLSPEL---KDFLDRCLV 508 (550)
T ss_pred hhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH-----HhhcCCCCcCCcc-ccCHHH---HHHHHHHhh
Confidence 354444455689999999999999999999841 01111 1111112222110 111111 234567999
Q ss_pred CCCCCCCChHHHHH
Q 003931 745 TTPDTRPSMRFVAQ 758 (785)
Q Consensus 745 ~~p~~Rp~m~~vv~ 758 (785)
.+|++||+..|.++
T Consensus 509 ~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 509 VDVEQRASAKELLE 522 (550)
T ss_pred cchhcCCCHHHHhc
Confidence 99999999998754
No 416
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.79 E-value=0.022 Score=32.26 Aligned_cols=11 Identities=73% Similarity=1.020 Sum_probs=4.6
Q ss_pred CEEECcCCccc
Q 003931 298 ENLDLSGNQLS 308 (785)
Q Consensus 298 ~~L~Ls~n~l~ 308 (785)
++||+++|+++
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 34444444443
No 417
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.65 E-value=0.022 Score=62.07 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=49.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCC--c-hhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPT--G-QLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~--~-~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+......|...|=|||||++.||++|..|- ..+...|++|.-+.... + ....+.+ .|.-.-...+
T Consensus 537 PEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF-------~gddEee~FdsI~~d~~~yP~~ls~ea~---~il~~ll~k~ 606 (694)
T KOG0694|consen 537 PEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF-------PGDDEEEVFDSIVNDEVRYPRFLSKEAI---AIMRRLLRKN 606 (694)
T ss_pred hhhhccCcccchhhHHHHHHHHHHHHcCCCCC-------CCCCHHHHHHHHhcCCCCCCCcccHHHH---HHHHHHhccC
Confidence 36777788899999999999999999999994 22233444443332110 0 1111222 2223335788
Q ss_pred CCCCCCh----HHHHH
Q 003931 747 PDTRPSM----RFVAQ 758 (785)
Q Consensus 747 p~~Rp~m----~~vv~ 758 (785)
|++|-.| .++|+
T Consensus 607 p~kRLG~~e~d~~~i~ 622 (694)
T KOG0694|consen 607 PEKRLGSGERDAEDIK 622 (694)
T ss_pred cccccCCCCCCchhhh
Confidence 9999988 55554
No 418
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=92.90 E-value=0.045 Score=31.01 Aligned_cols=19 Identities=47% Similarity=0.716 Sum_probs=9.9
Q ss_pred CcEEECcCccccccCChhcc
Q 003931 273 LQYLFLYRNNFSGPIPSEIE 292 (785)
Q Consensus 273 L~~L~L~~n~l~~~~p~~~~ 292 (785)
|++|++++|+++ .+|.+|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 4444443
No 419
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=92.77 E-value=0.099 Score=57.64 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=19.6
Q ss_pred ccccceeeeehhhhhhhhCCC-CC
Q 003931 679 TDKCDVFSFGVVALEVMMGRH-PG 701 (785)
Q Consensus 679 t~k~DVYSfGvvlLElltgk~-p~ 701 (785)
..+.||||+|||++||++|+. |.
T Consensus 410 ~~~~DvwSlGvil~em~~~~l~p~ 433 (507)
T PLN03224 410 PDLFDSYTAGVLLMQMCVPELRPV 433 (507)
T ss_pred CCccchhhHHHHHHHHHhCCCCCc
Confidence 456899999999999999975 54
No 420
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=92.19 E-value=0.12 Score=54.54 Aligned_cols=83 Identities=12% Similarity=0.119 Sum_probs=52.1
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC-cccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-ELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
+|+-...-...|+|+||+|+++-|+.+=|++.+--.+..- .......++|--... ..++. .+.-.|++.+|+
T Consensus 175 PEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~y----s~el~---~lv~~~l~~~P~ 247 (426)
T KOG0589|consen 175 PEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMY----SSELR---SLVKSMLRKNPE 247 (426)
T ss_pred HHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccc----cHHHH---HHHHHHhhcCCc
Confidence 4666667778999999999999999999988531110000 001112223322111 12222 334578999999
Q ss_pred CCCChHHHHHH
Q 003931 749 TRPSMRFVAQE 759 (785)
Q Consensus 749 ~Rp~m~~vv~~ 759 (785)
.||+..+++.+
T Consensus 248 ~RPsa~~LL~~ 258 (426)
T KOG0589|consen 248 HRPSALELLRR 258 (426)
T ss_pred cCCCHHHHhhC
Confidence 99999999876
No 421
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.56 E-value=0.16 Score=30.06 Aligned_cols=22 Identities=32% Similarity=0.354 Sum_probs=14.3
Q ss_pred CCCCEEeCCCCCCCCCCccccC
Q 003931 29 RKVRYLDLGGNFLETPDWSKFS 50 (785)
Q Consensus 29 ~~L~~L~L~~n~i~~~~~~~f~ 50 (785)
++|++|+|++|.|+.++.++|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4666677777766666666554
No 422
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.56 E-value=0.16 Score=30.06 Aligned_cols=22 Identities=32% Similarity=0.354 Sum_probs=14.3
Q ss_pred CCCCEEeCCCCCCCCCCccccC
Q 003931 29 RKVRYLDLGGNFLETPDWSKFS 50 (785)
Q Consensus 29 ~~L~~L~L~~n~i~~~~~~~f~ 50 (785)
++|++|+|++|.|+.++.++|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4666677777766666666554
No 423
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=91.22 E-value=0.15 Score=52.34 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=41.3
Q ss_pred cccceeeeehhhhhhhhCCCCCchhhhccCcccc-cccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHHHH
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGELITSLSGELFL-KDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFVAQ 758 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~vv~ 758 (785)
.|.|+||.||||.=.+||-.|.. +.. ..... ..+.-.+..-....+.+--.++..+.-.-...+|++||+..|+++
T Consensus 360 ~kVDiWSlGcvLfvcLsG~pPFS--~~~-~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 360 SKVDIWSLGCVLFVCLSGYPPFS--EEY-TDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred chheeeeccceEEEEeccCCCcc--ccc-CCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 57899999999999999999942 000 00000 011111111000111111122334444556789999999999865
No 424
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=91.15 E-value=0.39 Score=47.42 Aligned_cols=86 Identities=23% Similarity=0.388 Sum_probs=49.8
Q ss_pred hhhhh-cccccccceeeeehhhhhhhhCC--CCCc--------hhhhcc-----------CcccccccccCCCCCCCchh
Q 003931 671 ELAVT-MRVTDKCDVFSFGVVALEVMMGR--HPGE--------LITSLS-----------GELFLKDVLDQRLPPPTGQL 728 (785)
Q Consensus 671 e~~~~-~~~t~k~DVYSfGvvlLElltgk--~p~~--------~~~~~~-----------~~~~~~~~~d~~l~~~~~~~ 728 (785)
|+-.+ .+.-...|||+.|+|+-||+||. +|.+ ++.-+. .......+.=|....+. ..
T Consensus 171 ELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~e-pL 249 (396)
T KOG0593|consen 171 ELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPE-PL 249 (396)
T ss_pred hhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCcc-ch
Confidence 44333 45556789999999999999997 5643 111111 11112222222221110 01
Q ss_pred HH----HHHHHHHHHhhcCCCCCCCCCChHHHH
Q 003931 729 AE----AVVLTINVALACTSTTPDTRPSMRFVA 757 (785)
Q Consensus 729 ~~----~~~~~~~ial~C~~~~p~~Rp~m~~vv 757 (785)
+. .--.++.++-.|.+.+|.+|++-.+..
T Consensus 250 e~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 250 ERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred hhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 11 112456788899999999999988764
No 425
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=91.02 E-value=0.11 Score=56.73 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=30.8
Q ss_pred CCCchhhhhhhcccccccceeeeehhhhhhhhCCCC
Q 003931 665 SDNELTELAVTMRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 665 ~~n~l~e~~~~~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
++.+-+|+-.+....++.|+||+|+|+-||+|| +|
T Consensus 352 RfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~P 386 (586)
T KOG0667|consen 352 RFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EP 386 (586)
T ss_pred cccccchhhccCCCCCccceeehhhhHHhHhcC-cc
Confidence 445567888899999999999999999999999 56
No 426
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=90.92 E-value=0.22 Score=29.47 Aligned_cols=22 Identities=50% Similarity=0.606 Sum_probs=13.4
Q ss_pred CCccEEECCCCCCcccCChhhhc
Q 003931 77 RNLTYLDLSLNKLSGLIPERLFT 99 (785)
Q Consensus 77 ~~L~~L~Ls~n~i~~~~~~~~f~ 99 (785)
++|++|+|++|.++ .+|..+|.
T Consensus 2 ~~L~~L~L~~N~l~-~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLS-SLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCC-cCCHHHcc
Confidence 45666666666666 55665543
No 427
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=90.92 E-value=0.22 Score=29.47 Aligned_cols=22 Identities=50% Similarity=0.606 Sum_probs=13.4
Q ss_pred CCccEEECCCCCCcccCChhhhc
Q 003931 77 RNLTYLDLSLNKLSGLIPERLFT 99 (785)
Q Consensus 77 ~~L~~L~Ls~n~i~~~~~~~~f~ 99 (785)
++|++|+|++|.++ .+|..+|.
T Consensus 2 ~~L~~L~L~~N~l~-~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLS-SLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCC-cCCHHHcc
Confidence 45666666666666 55665543
No 428
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.85 E-value=0.15 Score=52.98 Aligned_cols=86 Identities=17% Similarity=0.323 Sum_probs=54.7
Q ss_pred cccceeeeehhhhhhhhCCCCCc--------hhhhccCccc---ccccc-cCCCCC---CCchhHHHHHHHHHHHhhcCC
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGE--------LITSLSGELF---LKDVL-DQRLPP---PTGQLAEAVVLTINVALACTS 744 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~--------~~~~~~~~~~---~~~~~-d~~l~~---~~~~~~~~~~~~~~ial~C~~ 744 (785)
..+||||||.|+-|+.-.-.-.+ +..||..+.. +.+|+ ..++.+ ......+++..+.++.-.|+.
T Consensus 405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~ 484 (513)
T KOG2052|consen 405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWY 484 (513)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 34799999999999963321111 2344444222 22222 223322 122345678888999999999
Q ss_pred CCCCCCCChHHHHHHHHhccc
Q 003931 745 TTPDTRPSMRFVAQELSAKTQ 765 (785)
Q Consensus 745 ~~p~~Rp~m~~vv~~l~~~~~ 765 (785)
.+|..|-|.-.+-+.|.++.+
T Consensus 485 ~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 485 ANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCchhhhHHHHHHHHHHHHhc
Confidence 999999998888777776643
No 429
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=90.81 E-value=0.12 Score=55.09 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=48.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc-hhhhccCcccccccccCCCCCCCc--hhHHHHHHHHHHHhhcCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE-LITSLSGELFLKDVLDQRLPPPTG--QLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~-~~~~~~~~~~~~~~~d~~l~~~~~--~~~~~~~~~~~ial~C~~~~ 746 (785)
+|+-....++..||+|+||+++..|+.|+.|-. --+| ...+.|++-...-+.+ .....+++ .-...+
T Consensus 256 PElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----liFqkI~~l~y~fp~~fp~~a~dLv~------KLLv~d 325 (604)
T KOG0592|consen 256 PELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----LIFQKIQALDYEFPEGFPEDARDLIK------KLLVRD 325 (604)
T ss_pred HHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----HHHHHHHHhcccCCCCCCHHHHHHHH------HHHccC
Confidence 466667788899999999999999999999942 0011 1234454444332211 11122222 124578
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|.+|++.+++-+
T Consensus 326 p~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 326 PSDRLTSQQIKA 337 (604)
T ss_pred ccccccHHHHhh
Confidence 999999966543
No 430
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=90.78 E-value=0.0067 Score=56.87 Aligned_cols=86 Identities=17% Similarity=0.167 Sum_probs=41.0
Q ss_pred ccCCCCCCcEEEccCCCCcccCCccCCCCCCccEEECCCCCCcccCChhhhcCCCCCcEEECCCCCCcccCCccccCCCC
Q 003931 48 KFSSMPSLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNKLSGLIPERLFTNLGKLEYLNLTENQFQGKLSPNVSKLSN 127 (785)
Q Consensus 48 ~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~f~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 127 (785)
.+......+.||++.|.+. ....-|..++.|..|+++.|.+. ..|.++ ..+..++.+++..|+.+ ..|..+...++
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~-~q~~e~~~~~~~~n~~~-~~p~s~~k~~~ 112 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDA-KQQRETVNAASHKNNHS-QQPKSQKKEPH 112 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhH-HHHHHHHHHHhhccchh-hCCccccccCC
Confidence 3444445555555555443 12223444445555555555554 444443 44555555555544444 34444455555
Q ss_pred CcEEEcCCCc
Q 003931 128 LIDLRLATNK 137 (785)
Q Consensus 128 L~~L~L~~n~ 137 (785)
++++++..|.
T Consensus 113 ~k~~e~k~~~ 122 (326)
T KOG0473|consen 113 PKKNEQKKTE 122 (326)
T ss_pred cchhhhccCc
Confidence 5555444444
No 431
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=90.54 E-value=0.00099 Score=72.30 Aligned_cols=38 Identities=32% Similarity=0.315 Sum_probs=17.8
Q ss_pred CCCCEEECcCCcccccCC----ccCcCCCCCCEEEccccccc
Q 003931 295 TSLENLDLSGNQLSGTIP----PTLWNLTNLLSLQLFSNNLS 332 (785)
Q Consensus 295 ~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~L~~n~l~ 332 (785)
..+++++++.|.+++... ..+..++.++++.++.|.+.
T Consensus 262 ~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 262 ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 344555555555543321 22334445555555555544
No 432
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.00 E-value=0.2 Score=54.30 Aligned_cols=71 Identities=18% Similarity=0.331 Sum_probs=44.3
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc-------hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE-------LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDT 749 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~-------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~ 749 (785)
-...|+|||||||-|.||.-|..|-. +.+-++. --|.+..+. .+.... -.+--.|...+|+.
T Consensus 211 PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS-------ePPTLlqPS-~Ws~~F---~DfLk~cL~Knp~~ 279 (1187)
T KOG0579|consen 211 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-------EPPTLLQPS-HWSRSF---SDFLKRCLVKNPRN 279 (1187)
T ss_pred CchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc-------CCCcccCcc-hhhhHH---HHHHHHHHhcCCcc
Confidence 34568999999999999999998843 1111111 112332221 222222 23445699999999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
||+..++.+
T Consensus 280 Rp~aaqll~ 288 (1187)
T KOG0579|consen 280 RPPAAQLLK 288 (1187)
T ss_pred CCCHHHHhh
Confidence 999887643
No 433
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=89.99 E-value=0.085 Score=51.61 Aligned_cols=27 Identities=26% Similarity=0.492 Sum_probs=23.4
Q ss_pred hcccccccceeeeehhhhhhhhCCCCC
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
....+.++|||+||++++|++||+.|.
T Consensus 174 ~~~~~~~~Dv~~lG~~~~~l~~g~~pf 200 (225)
T smart00221 174 GKGYGEAVDIWSLGVILYELLWGPEPF 200 (225)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCc
Confidence 345567999999999999999999985
No 434
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=89.73 E-value=0.11 Score=53.21 Aligned_cols=33 Identities=21% Similarity=0.502 Sum_probs=31.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
+|+.+..+...|+|.||-|+|+.|++|||.|.+
T Consensus 183 PEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 183 PEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred HHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 588889999999999999999999999999976
No 435
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=88.87 E-value=0.24 Score=52.52 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=48.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhhhccC-cccccccccCCCC--CCC-chhHHHHHHHHHHHhhcCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSG-ELFLKDVLDQRLP--PPT-GQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~-~~~~~~~~d~~l~--~~~-~~~~~~~~~~~~ial~C~~~~ 746 (785)
|.......+..+||||-||++..|+.|..|.. ... .+...++...+.. .+. ....+... .....+...+
T Consensus 208 Evl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~----~~~~~~~~~~i~~~~~~f~~~~w~~is~~ak---d~i~~ll~~d 280 (382)
T KOG0032|consen 208 EVLGGRPYGDEVDVWSIGVILYILLSGVPPFW----GETEFEIFLAILRGDFDFTSEPWDDISESAK---DFIRKLLEFD 280 (382)
T ss_pred hhhcCCCCCcccchhHHHHHHHHHhhCCCCCc----CCChhHHHHHHHcCCCCCCCCCccccCHHHH---HHHHHhcccC
Confidence 44444677899999999999999999999952 111 0111122222211 110 11111111 2334577888
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|.+|++..+|.+
T Consensus 281 p~~R~ta~~~L~ 292 (382)
T KOG0032|consen 281 PRKRLTAAQALQ 292 (382)
T ss_pred cccCCCHHHHhc
Confidence 999999999976
No 436
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=88.38 E-value=0.0031 Score=68.49 Aligned_cols=135 Identities=23% Similarity=0.240 Sum_probs=70.3
Q ss_pred CCcEEEcCCCccccc----CCcCCCCCCCCCEEEcccCcccc----cCCccc----cCCCCCCEEEcccCcCcccCC---
Q 003931 127 NLIDLRLATNKFSGP----IPGDIGSMSNLQLVELFNNSFTG----QIPSSL----GQLKNLQHLDLRMNALNYTIP--- 191 (785)
Q Consensus 127 ~L~~L~L~~n~~~~~----~~~~l~~l~~L~~L~L~~n~~~~----~~~~~l----~~l~~L~~L~l~~n~l~~~~~--- 191 (785)
.+++|++..|.+++. +...+.....+++++++.|.+.. .++.++ ....++++|.+++|.++....
T Consensus 145 ~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l 224 (478)
T KOG4308|consen 145 LLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALL 224 (478)
T ss_pred HHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHH
Confidence 344455555544432 12233345555556666555421 112222 235566777777766652111
Q ss_pred -ccccCCcc-cCeeeccccccccCC----chhccCC-CCCCEEEccCCCCccccCcc---ccCCCCCCCEEEeecCcCcc
Q 003931 192 -PELGLCTN-LSYLALAVNQLSGGL----PLSLSNL-SKLNDLGLSDNFLSGEISAN---LIGNWTELESLQIQNNSFMG 261 (785)
Q Consensus 192 -~~~~~l~~-L~~L~l~~n~i~~~~----~~~l~~l-~~L~~L~L~~n~l~~~~~~~---~~~~l~~L~~L~L~~n~l~~ 261 (785)
..+...+. +..++++.|.+.+.. ...+..+ ..+++++++.|.+...-... .+..++.++.+.+++|.+..
T Consensus 225 ~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 225 DEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 12233344 556777777765431 2233344 56678888888776432221 24456678888888887654
No 437
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=87.94 E-value=0.29 Score=25.62 Aligned_cols=10 Identities=60% Similarity=0.677 Sum_probs=3.2
Q ss_pred ccEEECCCCC
Q 003931 79 LTYLDLSLNK 88 (785)
Q Consensus 79 L~~L~Ls~n~ 88 (785)
|+.|++++|+
T Consensus 3 L~~L~l~~n~ 12 (17)
T PF13504_consen 3 LRTLDLSNNR 12 (17)
T ss_dssp -SEEEETSS-
T ss_pred cCEEECCCCC
Confidence 3344444443
No 438
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.81 E-value=0.3 Score=51.29 Aligned_cols=86 Identities=19% Similarity=0.277 Sum_probs=48.1
Q ss_pred hhcccccccceeeeehhhhhhhhCCC--C----Cc-h--hhhccC----ccc-----ccccccCCCCCCCchh-----HH
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMMGRH--P----GE-L--ITSLSG----ELF-----LKDVLDQRLPPPTGQL-----AE 730 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLElltgk~--p----~~-~--~~~~~~----~~~-----~~~~~d~~l~~~~~~~-----~~ 730 (785)
.++..|.+.|+|+||+|+.|+.+=|. | +| + ++.|-. +.| ....+.-++....+.. ..
T Consensus 183 rs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~ 262 (538)
T KOG0661|consen 183 RSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPN 262 (538)
T ss_pred hccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcc
Confidence 34667889999999999999987652 2 22 1 111111 001 1112221211100000 01
Q ss_pred HHHHHHHHHhhcCCCCCCCCCChHHHHHH
Q 003931 731 AVVLTINVALACTSTTPDTRPSMRFVAQE 759 (785)
Q Consensus 731 ~~~~~~~ial~C~~~~p~~Rp~m~~vv~~ 759 (785)
+-.+.+++.-.|.+-+|.+|||..++++.
T Consensus 263 ~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 263 ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 22334566678999999999999998764
No 439
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=87.78 E-value=0.031 Score=52.54 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=26.3
Q ss_pred cccCCCCCeecccCCcccCcCCcccccCCCCCeEecCCCcCccCCCccccccCCCcEEeCCCCc
Q 003931 532 LGKLVKLFNLNLSNNHLTGEIPKSISNLTELAYLDLSNNKLTGDVPQELGRFDKLLSLNLSHND 595 (785)
Q Consensus 532 l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ls~N~ 595 (785)
|+.++.|..|+++.|++. ..|..++....+..+++.+|..+ ..|.+++..++++.+++.+|.
T Consensus 61 ~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~k~~~ 122 (326)
T KOG0473|consen 61 FSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQKKTE 122 (326)
T ss_pred hHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhhccCc
Confidence 333334444444444443 33344444444444444444333 334444444444444444444
No 440
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=87.22 E-value=0.2 Score=46.57 Aligned_cols=26 Identities=35% Similarity=0.538 Sum_probs=23.6
Q ss_pred ccccccceeeeehhhhhhhhCCCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+-|+||||.|+-+.|+.|||.|.+
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred cceeehhhhhhhhhhhhhhhcccccc
Confidence 45789999999999999999999965
No 441
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=86.51 E-value=0.42 Score=45.60 Aligned_cols=79 Identities=16% Similarity=0.121 Sum_probs=50.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCchhh--hccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGELIT--SLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|...+.--..+.|+|+.||+..|.+.|..|.+-.. -....-.-.++.+|.-. + . .+..+...|...+|.
T Consensus 192 Emv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~i--s----~---~a~dlI~~ll~~~p~ 262 (281)
T KOG0580|consen 192 EMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTI--S----G---GAADLISRLLVKNPI 262 (281)
T ss_pred hhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCccc--C----h---hHHHHHHHHhccCcc
Confidence 44445556778999999999999999999964111 00001111234444211 1 1 123456679999999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+|++-.||++
T Consensus 263 ~r~~l~~v~~ 272 (281)
T KOG0580|consen 263 ERLALTEVMD 272 (281)
T ss_pred ccccHHHHhh
Confidence 9999999875
No 442
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=85.08 E-value=0.58 Score=49.56 Aligned_cols=78 Identities=21% Similarity=0.273 Sum_probs=52.4
Q ss_pred cccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHHHH-
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFVAQ- 758 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~vv~- 758 (785)
...||||.||+|.-++-|+.|.+ -+-..+...-++|.....+.-...+| ..++ -.....+|++|-+..|++.
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFq---eANDSETLTmImDCKYtvPshvS~eC-rdLI---~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQ---EANDSETLTMIMDCKYTVPSHVSKEC-RDLI---QSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccc---cccchhhhhhhhcccccCchhhhHHH-HHHH---HHHHhcCchhhccHHHHhcc
Confidence 46799999999999999999952 11124556778888876543222222 2222 2345689999999999875
Q ss_pred -HHHhcc
Q 003931 759 -ELSAKT 764 (785)
Q Consensus 759 -~l~~~~ 764 (785)
||+.+.
T Consensus 271 ~Wlq~~D 277 (864)
T KOG4717|consen 271 SWLQAGD 277 (864)
T ss_pred ccccCCC
Confidence 565543
No 443
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=84.41 E-value=0.53 Score=48.77 Aligned_cols=28 Identities=32% Similarity=0.631 Sum_probs=25.4
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCc
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
..+++.|.||||.||++..-+-||+|.+
T Consensus 658 PPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 658 PPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred CCccccceeeEeeehhhhhhhccCCCCC
Confidence 3578999999999999999999999964
No 444
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.01 E-value=0.13 Score=47.71 Aligned_cols=81 Identities=17% Similarity=0.106 Sum_probs=47.9
Q ss_pred CCCEEeCCCCCCCCCCccccCCCCCCcEEEccCCC-CcccCCccCC-CCCCccEEECCCC-CCcccCChhhhcCCCCCcE
Q 003931 30 KVRYLDLGGNFLETPDWSKFSSMPSLTHLGLYLNE-LTLEFPSFIL-TCRNLTYLDLSLN-KLSGLIPERLFTNLGKLEY 106 (785)
Q Consensus 30 ~L~~L~L~~n~i~~~~~~~f~~l~~L~~L~L~~n~-i~~~~~~~~~-~l~~L~~L~Ls~n-~i~~~~~~~~f~~l~~L~~ 106 (785)
.++.+|-++..|.......+.+++.++.|.+.+|. +..-.-+.++ -.++|+.|++++| +|+..--.. +.++++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~-L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLAC-LLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHH-HHHhhhhHH
Confidence 46677777777766666667777777777776664 1111111111 2467888888877 455322222 356777777
Q ss_pred EECCC
Q 003931 107 LNLTE 111 (785)
Q Consensus 107 L~Ls~ 111 (785)
|.+.+
T Consensus 181 L~l~~ 185 (221)
T KOG3864|consen 181 LHLYD 185 (221)
T ss_pred HHhcC
Confidence 76654
No 445
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=82.51 E-value=0.51 Score=47.96 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=26.4
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
|+-...-.+..+|-||.||++.||+||+.|-
T Consensus 195 Eil~~~gy~~~vDWWsLGillYeML~G~pPF 225 (357)
T KOG0598|consen 195 EILLGKGYDKAVDWWSLGILLYEMLTGKPPF 225 (357)
T ss_pred HHHhcCCCCcccchHhHHHHHHHHhhCCCCC
Confidence 5555556678899999999999999999995
No 446
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=81.35 E-value=2.5 Score=45.11 Aligned_cols=25 Identities=20% Similarity=0.424 Sum_probs=22.1
Q ss_pred cccccccceeeeehhhhhhhhCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
.+.+...|+||-|+|+.||++||..
T Consensus 295 t~Yg~aVDlWS~GCIl~El~~gkPI 319 (560)
T KOG0600|consen 295 TSYGTAVDLWSVGCILAELFLGKPI 319 (560)
T ss_pred cccccceeehhhhHHHHHHHcCCCC
Confidence 3567889999999999999999965
No 447
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=79.98 E-value=1.4 Score=43.45 Aligned_cols=82 Identities=22% Similarity=0.323 Sum_probs=45.3
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCCc-hhhhccCcccccccccCCCCCCC-chhHHHHHHHHHHHhhcCCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPGE-LITSLSGELFLKDVLDQRLPPPT-GQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~~-~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
|+-...-..+++|+||.|+...||.-||.|.. ++- .+..- +=|.=.++. ...++---..-...-.|.-..|+
T Consensus 199 EVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP-----MRAIF-MIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE 272 (502)
T KOG0574|consen 199 EVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP-----MRAIF-MIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPE 272 (502)
T ss_pred HHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc-----cceeE-eccCCCCCCCCChHhhhhHHHHHHHHHhcCCHH
Confidence 33333344589999999999999999999952 210 00000 011111111 11111112234556678888999
Q ss_pred CCCChHHHHH
Q 003931 749 TRPSMRFVAQ 758 (785)
Q Consensus 749 ~Rp~m~~vv~ 758 (785)
+|-|.-.+++
T Consensus 273 ~R~TA~~L~~ 282 (502)
T KOG0574|consen 273 ERKTALRLCE 282 (502)
T ss_pred HHHHHHHHhh
Confidence 8887655443
No 448
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=79.83 E-value=1.5 Score=47.43 Aligned_cols=78 Identities=18% Similarity=0.292 Sum_probs=47.6
Q ss_pred hcccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChH
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMR 754 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~ 754 (785)
.++.+.|.||||.||.-.|+.-.|.|.--......--.+..---|.+.. ..+.+... ...=.|.+.-|.+|||-.
T Consensus 199 EGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs--~eWS~~F~---~Fvd~CLqKipqeRptse 273 (948)
T KOG0577|consen 199 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS--NEWSDYFR---NFVDSCLQKIPQERPTSE 273 (948)
T ss_pred ccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC--chhHHHHH---HHHHHHHhhCcccCCcHH
Confidence 5788899999999999999998888842000000000111112244432 23334333 344579999999999987
Q ss_pred HHH
Q 003931 755 FVA 757 (785)
Q Consensus 755 ~vv 757 (785)
+..
T Consensus 274 ~ll 276 (948)
T KOG0577|consen 274 ELL 276 (948)
T ss_pred HHh
Confidence 653
No 449
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=79.64 E-value=1.4 Score=44.18 Aligned_cols=81 Identities=22% Similarity=0.318 Sum_probs=46.2
Q ss_pred chhhhhhhcccccccceeeeehhhhhhhhCCC-CCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCC
Q 003931 668 ELTELAVTMRVTDKCDVFSFGVVALEVMMGRH-PGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTT 746 (785)
Q Consensus 668 ~l~e~~~~~~~t~k~DVYSfGvvlLElltgk~-p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~ 746 (785)
.-.+|+.+...+..+|+|+||.-.||+-.|.- |++--..+.-+..+..++-- + ..+.. ....--|....
T Consensus 249 ~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~-l--en~lq-------r~~i~kcl~~e 318 (458)
T KOG1266|consen 249 SAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG-L--ENGLQ-------RGSITKCLEGE 318 (458)
T ss_pred ccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee-c--cCccc-------cCcCcccccCC
Confidence 34588889999999999999998899876652 22211111111111111000 0 00000 01123499999
Q ss_pred CCCCCChHHHHH
Q 003931 747 PDTRPSMRFVAQ 758 (785)
Q Consensus 747 p~~Rp~m~~vv~ 758 (785)
|..||+|++...
T Consensus 319 P~~rp~ar~llf 330 (458)
T KOG1266|consen 319 PNGRPDARLLLF 330 (458)
T ss_pred CCCCcchhhhhc
Confidence 999999998643
No 450
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.73 E-value=0.25 Score=45.80 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=21.1
Q ss_pred CCcEEEccCCCCcccCCccCCCCCCccEEECCCCC
Q 003931 54 SLTHLGLYLNELTLEFPSFILTCRNLTYLDLSLNK 88 (785)
Q Consensus 54 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 88 (785)
.++.++-++..|..+.-+.+..++.++.|.+.+|.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck 136 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCK 136 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheecccc
Confidence 35556666666665555556666666666666654
No 451
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=77.80 E-value=1.7 Score=49.12 Aligned_cols=83 Identities=24% Similarity=0.249 Sum_probs=49.2
Q ss_pred chhhhhhhcccccccceeeeehhhhhhhhC-CCCCc--hhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCC
Q 003931 668 ELTELAVTMRVTDKCDVFSFGVVALEVMMG-RHPGE--LITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTS 744 (785)
Q Consensus 668 ~l~e~~~~~~~t~k~DVYSfGvvlLElltg-k~p~~--~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~ 744 (785)
.-+|.-...+-+...|+||+|+|+.-.+|| ++|-+ +.+.+ .......+-....+. .++ ...++.-.-.+
T Consensus 681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---NIl~~~~~L~~L~~~---~d~--eA~dLI~~ml~ 752 (903)
T KOG1027|consen 681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---NILTGNYTLVHLEPL---PDC--EAKDLISRMLN 752 (903)
T ss_pred cCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---hhhcCccceeeeccC---chH--HHHHHHHHhcC
Confidence 345666667777889999999999999997 89954 21111 011111110000010 111 22334445578
Q ss_pred CCCCCCCChHHHHH
Q 003931 745 TTPDTRPSMRFVAQ 758 (785)
Q Consensus 745 ~~p~~Rp~m~~vv~ 758 (785)
.+|..||+..+|..
T Consensus 753 ~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 753 PDPQLRPSATDVLN 766 (903)
T ss_pred CCcccCCCHHHHhC
Confidence 99999999999964
No 452
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=75.98 E-value=1 Score=49.93 Aligned_cols=27 Identities=33% Similarity=0.500 Sum_probs=24.2
Q ss_pred hcccccccceeeeehhhhhhhhCCCCC
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
....+.-+|.|||||.+.|..||..|.
T Consensus 198 q~~y~~tVDLWS~GvtlY~caTG~lPF 224 (732)
T KOG4250|consen 198 QKKYTATVDLWSFGVTLYECATGELPF 224 (732)
T ss_pred ccCcCceeehhhhhhHHHHHhccCCCC
Confidence 366788899999999999999999995
No 453
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=75.04 E-value=2.6 Score=24.98 Aligned_cols=16 Identities=25% Similarity=0.297 Sum_probs=9.3
Q ss_pred CCCCEEeCCCCCCCCC
Q 003931 29 RKVRYLDLGGNFLETP 44 (785)
Q Consensus 29 ~~L~~L~L~~n~i~~~ 44 (785)
.+|+.|+++.|+|+.+
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 4566666666665544
No 454
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=73.63 E-value=2.2 Score=43.48 Aligned_cols=93 Identities=16% Similarity=0.166 Sum_probs=52.8
Q ss_pred Cchhhhhhh-cccccccceeeeehhhhhhhhCCC--CCc-----hhhhccC------------cccccccccCCCCCCCc
Q 003931 667 NELTELAVT-MRVTDKCDVFSFGVVALEVMMGRH--PGE-----LITSLSG------------ELFLKDVLDQRLPPPTG 726 (785)
Q Consensus 667 n~l~e~~~~-~~~t~k~DVYSfGvvlLElltgk~--p~~-----~~~~~~~------------~~~~~~~~d~~l~~~~~ 726 (785)
.+-+|+-.+ ...|++-||||-|+|+-||+-|+. |.+ ++.-++- ...-.+.-.|.+.....
T Consensus 191 YRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~ 270 (364)
T KOG0658|consen 191 YRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPW 270 (364)
T ss_pred ccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccc
Confidence 333454433 356889999999999999999873 222 2222111 00111222233322110
Q ss_pred ---hhHHHHHHHHHHHhhcCCCCCCCCCChHHHHHH
Q 003931 727 ---QLAEAVVLTINVALACTSTTPDTRPSMRFVAQE 759 (785)
Q Consensus 727 ---~~~~~~~~~~~ial~C~~~~p~~Rp~m~~vv~~ 759 (785)
.....-...+++.-.+..-+|.+|.+..|+++.
T Consensus 271 ~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 271 HKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred eeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 000111245677888999999999999988763
No 455
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=72.92 E-value=0.78 Score=26.45 Aligned_cols=11 Identities=73% Similarity=0.990 Sum_probs=3.5
Q ss_pred CCEEECcCCcc
Q 003931 297 LENLDLSGNQL 307 (785)
Q Consensus 297 L~~L~Ls~n~l 307 (785)
|+.|+|++|++
T Consensus 4 L~~L~l~~n~i 14 (24)
T PF13516_consen 4 LETLDLSNNQI 14 (24)
T ss_dssp -SEEE-TSSBE
T ss_pred CCEEEccCCcC
Confidence 33333333333
No 456
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=69.51 E-value=1.7 Score=44.25 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=21.0
Q ss_pred cccccccceeeeehhhhhhhhCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRH 699 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~ 699 (785)
...|...||||-|+++-||+|||.
T Consensus 203 ~~Yt~aiDiWSvGCI~AEmL~gkp 226 (359)
T KOG0660|consen 203 SEYTKAIDIWSVGCILAEMLTGKP 226 (359)
T ss_pred ccccchhhhhhhhHHHHHHHcCCC
Confidence 456788899999999999999983
No 457
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=68.56 E-value=1.6 Score=44.97 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=21.1
Q ss_pred ccccceeeeehhhhhhhhCCCCCc
Q 003931 679 TDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 679 t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
....|-|||||+|.||+.|..|.|
T Consensus 528 gksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 528 GKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred ccchhHHHHHHHHHHHHcCCCCCC
Confidence 456799999999999999999964
No 458
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=67.25 E-value=3 Score=44.25 Aligned_cols=29 Identities=21% Similarity=0.368 Sum_probs=25.0
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGR 698 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk 698 (785)
.|+-.+...++.+|+|||.++..||.||.
T Consensus 420 pEVllGsgY~~~ADiWS~AC~~FELaTGD 448 (590)
T KOG1290|consen 420 PEVLLGSGYSTSADIWSTACMAFELATGD 448 (590)
T ss_pred cceeecCCCCCchhHHHHHHHHHHhhcCc
Confidence 35556677889999999999999999996
No 459
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=63.88 E-value=3 Score=44.84 Aligned_cols=31 Identities=26% Similarity=0.518 Sum_probs=26.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
|+-........||-||.|+|+.|++.|-.|-
T Consensus 358 EVll~kgY~~~cDwWSLG~ImyEmLvGyPPF 388 (550)
T KOG0605|consen 358 EVLLGKGYGKECDWWSLGCIMYEMLVGYPPF 388 (550)
T ss_pred HHHhcCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 5545555678899999999999999999994
No 460
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=63.61 E-value=3.1 Score=43.25 Aligned_cols=27 Identities=33% Similarity=0.443 Sum_probs=23.8
Q ss_pred hcccccccceeeeehhhhhhhhCCCCC
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
...-|++.||||-|||+|-+++++.|.
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PF 278 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPF 278 (418)
T ss_pred ccCcCCccceeeccceeehhhcccccc
Confidence 346689999999999999999999983
No 461
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=63.13 E-value=2.5 Score=45.71 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=27.7
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+..+.-....+|.||.|+|+.|+.+|+.|.
T Consensus 169 PElv~e~pyd~~sDlWslGcilYE~~~G~PPF 200 (808)
T KOG0597|consen 169 PELVEEQPYDHTSDLWSLGCILYELYVGQPPF 200 (808)
T ss_pred HHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence 46666677788899999999999999999994
No 462
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=62.01 E-value=3.6 Score=39.60 Aligned_cols=32 Identities=19% Similarity=0.338 Sum_probs=27.5
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-..-.++...|||+-||||.=++.|+-|.
T Consensus 181 PEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF 212 (355)
T KOG0033|consen 181 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 212 (355)
T ss_pred HHHhhcCCCCCcchhhhhhHHHHHHHhCCCCC
Confidence 46656667888999999999999999999994
No 463
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=60.28 E-value=3 Score=40.79 Aligned_cols=27 Identities=22% Similarity=0.602 Sum_probs=23.5
Q ss_pred cccccccceeeeehhhhhhhhCCCCCc
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~ 702 (785)
.++....|||-||||+.-.+||+-|..
T Consensus 200 ~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 200 LVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred eEecccccchheeeeeeeeecCCCcch
Confidence 456677899999999999999999964
No 464
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=59.76 E-value=2.9 Score=41.83 Aligned_cols=27 Identities=30% Similarity=0.567 Sum_probs=23.2
Q ss_pred cccceeeeehhhhhhhhCCCCCchhhh
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGELITS 706 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~~~~~ 706 (785)
-..|-|+.||++.||+.||.|.|+|..
T Consensus 430 fsvdwwalgvlmfemmagrspfdivgm 456 (593)
T KOG0695|consen 430 FSVDWWALGVLMFEMMAGRSPFDIVGM 456 (593)
T ss_pred ceehHHHHHHHHHHHHcCCCCcceecC
Confidence 346889999999999999999987753
No 465
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=59.11 E-value=23 Score=37.84 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=17.9
Q ss_pred CCEEECcCCcccccCCc---cCcCCCCCCEEEccccccc
Q 003931 297 LENLDLSGNQLSGTIPP---TLWNLTNLLSLQLFSNNLS 332 (785)
Q Consensus 297 L~~L~Ls~n~l~~~~p~---~l~~l~~L~~L~L~~n~l~ 332 (785)
++.+.++.|.+....-. .+..-+.+..|++++|...
T Consensus 415 l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mg 453 (553)
T KOG4242|consen 415 LAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMG 453 (553)
T ss_pred ccCcccCCCcccccHHHHHHhhccCcccccccccCCCcc
Confidence 45555666555422111 1233355666777766543
No 466
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=57.64 E-value=3.7 Score=40.15 Aligned_cols=77 Identities=12% Similarity=0.204 Sum_probs=43.5
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCccc-ccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELF-LKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFV 756 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~v 756 (785)
.+...|.|+.||++.-++.|-.|. |.+.+.- ..-++.-...-..+++.+--..+-.+.-.|.+.+|.+|-|..|+
T Consensus 205 Ys~EVD~Wa~GVImyTLLaGcpPF----wHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~ 280 (411)
T KOG0599|consen 205 YSKEVDEWACGVIMYTLLAGCPPF----WHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEA 280 (411)
T ss_pred ccchhhHHHHHHHHHHHHcCCCch----hHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHH
Confidence 345689999999999999999985 3221100 00001111100001111111122345567889999999999998
Q ss_pred HH
Q 003931 757 AQ 758 (785)
Q Consensus 757 v~ 758 (785)
++
T Consensus 281 La 282 (411)
T KOG0599|consen 281 LA 282 (411)
T ss_pred hc
Confidence 65
No 467
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=56.33 E-value=9.3 Score=43.86 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=46.0
Q ss_pred ccccccceeeeehhhhhhhhCCCCC-chhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG-ELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRF 755 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~-~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~ 755 (785)
..+-.|||||.|+..+||--|+.|- |++-. +.=-.+.--=-|.+.. .+.--.+..+....|...+-++||+|.+
T Consensus 204 tyd~R~D~WsLGITaIEladG~PPl~DmHPm-raLF~IpRNPPPkLkr----p~kWs~~FndFIs~cL~Kd~e~RP~~~~ 278 (953)
T KOG0587|consen 204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-RALFLIPRNPPPKLKR----PKKWSKKFNDFISTCLVKDYEQRPSTEE 278 (953)
T ss_pred CcccccchhhccceeehhcCCCCCccCcchh-hhhccCCCCCCccccc----hhhHHHHHHHHHHHHHhhccccCcchhh
Confidence 3456799999999999999999883 21100 0000000000112221 2222334567778899999999999987
Q ss_pred HHH
Q 003931 756 VAQ 758 (785)
Q Consensus 756 vv~ 758 (785)
.++
T Consensus 279 ll~ 281 (953)
T KOG0587|consen 279 LLK 281 (953)
T ss_pred hcc
Confidence 653
No 468
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=56.02 E-value=4.5 Score=44.46 Aligned_cols=31 Identities=32% Similarity=0.572 Sum_probs=26.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
|+-...-.+.-||-||-||||.||+.|+-|.
T Consensus 841 evl~r~g~~q~cdwws~gvil~em~~g~~pf 871 (1034)
T KOG0608|consen 841 EVLARTGYTQLCDWWSVGVILYEMLVGQPPF 871 (1034)
T ss_pred HHhcccCccccchhhHhhHHHHHHhhCCCCc
Confidence 5544555788999999999999999999883
No 469
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=55.16 E-value=7.3 Score=41.37 Aligned_cols=86 Identities=12% Similarity=0.239 Sum_probs=47.8
Q ss_pred cccceeeeehhhhhhhhCCCCCc---hhhh-------ccCcc---cccc-ccc----CCCCCCCchhHHHHHHHHHHHhh
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGE---LITS-------LSGEL---FLKD-VLD----QRLPPPTGQLAEAVVLTINVALA 741 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~---~~~~-------~~~~~---~~~~-~~d----~~l~~~~~~~~~~~~~~~~ial~ 741 (785)
-..||||.|-|+-|++++-...+ ...| +.... .+.+ |+. |.+... ......+..+-+..=.
T Consensus 403 kr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~-W~~h~~~~~l~et~Ee 481 (534)
T KOG3653|consen 403 KRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDA-WRKHAGMAVLCETIEE 481 (534)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhh-hhcCccHHHHHHHHHH
Confidence 46799999999999998743321 0000 00000 0111 111 111110 0001223334456668
Q ss_pred cCCCCCCCCCChHHHHHHHHhcccc
Q 003931 742 CTSTTPDTRPSMRFVAQELSAKTQA 766 (785)
Q Consensus 742 C~~~~p~~Rp~m~~vv~~l~~~~~~ 766 (785)
|++.+|+.|-|.+-|-+++.++...
T Consensus 482 CWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 482 CWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred HcCCchhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999998887665443
No 470
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=54.80 E-value=5.6 Score=42.82 Aligned_cols=23 Identities=17% Similarity=0.573 Sum_probs=20.1
Q ss_pred hhcccccccceeeeehhhhhhhh
Q 003931 674 VTMRVTDKCDVFSFGVVALEVMM 696 (785)
Q Consensus 674 ~~~~~t~k~DVYSfGvvlLEllt 696 (785)
.+...+.|.|+||.|++|.|+++
T Consensus 435 ~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 435 RGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhhhhcchhhHHHHHHHHHH
Confidence 34567899999999999999987
No 471
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=54.54 E-value=6.3 Score=41.87 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=42.3
Q ss_pred cccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHHH
Q 003931 678 VTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFVA 757 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~vv 757 (785)
...+-||||.||-|.=++-|+-|.- ..+ . -+....++...+.-+......+..+-+-..+ ...+|++|.+..||.
T Consensus 296 ~g~a~DiWalGVTLYCllfG~~PF~-~~~-~-~~l~~KIvn~pL~fP~~pe~~e~~kDli~~l--L~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 296 SGFALDIWALGVTLYCLLFGQLPFF-DDF-E-LELFDKIVNDPLEFPENPEINEDLKDLIKRL--LEKDPEQRITLPDIK 370 (576)
T ss_pred cchhhhhhhhhhhHHHhhhccCCcc-cch-H-HHHHHHHhcCcccCCCcccccHHHHHHHHHH--hhcChhheeehhhhe
Confidence 3467899999999999999999941 000 0 0011222222222111111122333222334 457899999999986
Q ss_pred HH
Q 003931 758 QE 759 (785)
Q Consensus 758 ~~ 759 (785)
.-
T Consensus 371 ~H 372 (576)
T KOG0585|consen 371 LH 372 (576)
T ss_pred ec
Confidence 43
No 472
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=53.13 E-value=7.2 Score=39.70 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=46.4
Q ss_pred ccccccceeeeehhhhhhhhCCCC--Cc--------hhhhccC---cccccc--cccCCCC--CCC-c-hhHHH----HH
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHP--GE--------LITSLSG---ELFLKD--VLDQRLP--PPT-G-QLAEA----VV 733 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p--~~--------~~~~~~~---~~~~~~--~~d~~l~--~~~-~-~~~~~----~~ 733 (785)
..++..|+||.|+++.||++++.= .+ +.+-+.. +.|... .-|.... ... . ....+ .-
T Consensus 197 ~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~ 276 (323)
T KOG0594|consen 197 SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDP 276 (323)
T ss_pred cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCc
Confidence 578889999999999999996632 22 1110000 111111 1111110 000 0 00010 12
Q ss_pred HHHHHHhhcCCCCCCCCCChHHHHHH
Q 003931 734 LTINVALACTSTTPDTRPSMRFVAQE 759 (785)
Q Consensus 734 ~~~~ial~C~~~~p~~Rp~m~~vv~~ 759 (785)
...++...|.+.+|..|.+...++.+
T Consensus 277 ~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 277 DGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cHHHHHHHHhccCcccCcCHHHHhcC
Confidence 45677888999999999999988765
No 473
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=53.02 E-value=4.7 Score=40.09 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=24.0
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
|+-.+.-.....|=|+|||+..||+.|..|-
T Consensus 211 Eii~sk~ynkavDWWalGVLIYEMlaG~pPF 241 (355)
T KOG0616|consen 211 EIIQSKGYNKAVDWWALGVLIYEMLAGYPPF 241 (355)
T ss_pred HHhhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 4444444455679999999999999999994
No 474
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=51.27 E-value=9.6 Score=22.56 Aligned_cols=12 Identities=67% Similarity=0.797 Sum_probs=5.7
Q ss_pred CCeecccCCccc
Q 003931 538 LFNLNLSNNHLT 549 (785)
Q Consensus 538 L~~L~ls~n~l~ 549 (785)
|+.|++++|+++
T Consensus 4 L~~L~vs~N~Lt 15 (26)
T smart00364 4 LKELNVSNNQLT 15 (26)
T ss_pred cceeecCCCccc
Confidence 444444444444
No 475
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=50.21 E-value=5.6 Score=39.98 Aligned_cols=32 Identities=22% Similarity=0.463 Sum_probs=26.5
Q ss_pred CchhhhhhhcccccccceeeeehhhhhhhhCC
Q 003931 667 NELTELAVTMRVTDKCDVFSFGVVALEVMMGR 698 (785)
Q Consensus 667 n~l~e~~~~~~~t~k~DVYSfGvvlLElltgk 698 (785)
.+.+|.-.++...++.|+||-|+++-||++|+
T Consensus 183 yrapevil~~~~ke~vdiwSvGci~gEli~~~ 214 (369)
T KOG0665|consen 183 YRAPEVILGMGYKENVDIWSVGCIMGELILGT 214 (369)
T ss_pred ccCchheeccCCcccchhhhhhhHHHHHhhce
Confidence 34456666666889999999999999999997
No 476
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=49.86 E-value=10 Score=43.22 Aligned_cols=83 Identities=16% Similarity=0.242 Sum_probs=43.4
Q ss_pred cccceeeeehhhhhhhhCCCCCchhhhccCcccccccc--cC-CCCCCCchhHHHHHHHHHHH-hhcCCCCCCCCCChHH
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVL--DQ-RLPPPTGQLAEAVVLTINVA-LACTSTTPDTRPSMRF 755 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~--d~-~l~~~~~~~~~~~~~~~~ia-l~C~~~~p~~Rp~m~~ 755 (785)
.-.||||-|||+..|++|+.|.....- .+....+.. +. ............+-.-.+.+ ..-.+.+|.+|-+|.+
T Consensus 504 r~vDiwS~~ii~~~m~~~~~~Wk~a~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~ 581 (601)
T KOG0590|consen 504 RAVDVWSCGIIYICMILGRFPWKVAKK--SDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQ 581 (601)
T ss_pred chhhhhhccceEEEEecCCCccccccc--cccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHH
Confidence 457999999999999999998421100 011000000 00 00000011111111112333 3445899999999999
Q ss_pred HHH--HHHhcc
Q 003931 756 VAQ--ELSAKT 764 (785)
Q Consensus 756 vv~--~l~~~~ 764 (785)
+.+ |+++|.
T Consensus 582 i~~d~W~~~i~ 592 (601)
T KOG0590|consen 582 ILNDEWIRSIE 592 (601)
T ss_pred HhhChHhhhcc
Confidence 976 455543
No 477
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=49.73 E-value=14 Score=22.27 Aligned_cols=14 Identities=57% Similarity=0.776 Sum_probs=9.0
Q ss_pred CCCCEEECcCCccc
Q 003931 295 TSLENLDLSGNQLS 308 (785)
Q Consensus 295 ~~L~~L~Ls~n~l~ 308 (785)
++|++|||++|.+.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 45666777776664
No 478
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=46.84 E-value=6.5 Score=39.81 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=20.8
Q ss_pred cccccccceeeeehhhhhhhhCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRH 699 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~ 699 (785)
...++..|+||+|+|+-|++++|.
T Consensus 253 ~tyst~iDMWSvGCI~aE~l~~kP 276 (419)
T KOG0663|consen 253 KTYSTAVDMWSVGCIFAELLTQKP 276 (419)
T ss_pred cccCcchhhhhHHHHHHHHHhcCC
Confidence 345788999999999999999873
No 479
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=43.72 E-value=7 Score=40.75 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=21.4
Q ss_pred ccccccceeeeehhhhhhhhCCCCC
Q 003931 677 RVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
--.-..|=|.|||++.||+-|+.|-
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPF 335 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPF 335 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCc
Confidence 3455679999999999999999994
No 480
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=43.69 E-value=31 Score=34.61 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=42.6
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhhccCcccccccccCCCC-C----CCchhHHHHHHHHHHHhhc-CCCCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITSLSGELFLKDVLDQRLP-P----PTGQLAEAVVLTINVALAC-TSTTPDT 749 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~~~~~~~~~~~~d~~l~-~----~~~~~~~~~~~~~~ial~C-~~~~p~~ 749 (785)
-+....||.||.||++.=|+-|-.|.--- ....+.-=+..++. + +.+++ .|+.+..+=-+.| ...+|.+
T Consensus 238 eKydkscdmwSlgVimYIlLCGyPPFYS~----hg~aispgMk~rI~~gqy~FP~pEW-s~VSe~aKdlIR~LLkt~Pte 312 (400)
T KOG0604|consen 238 EKYDKSCDMWSLGVIMYILLCGYPPFYSN----HGLAISPGMKRRIRTGQYEFPEPEW-SCVSEAAKDLIRKLLKTEPTE 312 (400)
T ss_pred hhcCCCCCccchhHHHHHhhcCCCccccc----CCccCChhHHhHhhccCccCCChhH-hHHHHHHHHHHHHHhcCCchh
Confidence 34556799999999999999999884200 00000000011110 1 11111 2333333333333 4778999
Q ss_pred CCChHHHHH
Q 003931 750 RPSMRFVAQ 758 (785)
Q Consensus 750 Rp~m~~vv~ 758 (785)
|-|+.+|+.
T Consensus 313 RlTI~~~m~ 321 (400)
T KOG0604|consen 313 RLTIEEVMD 321 (400)
T ss_pred heeHHHhhc
Confidence 999999865
No 481
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=41.42 E-value=7.8 Score=36.98 Aligned_cols=21 Identities=19% Similarity=0.460 Sum_probs=19.0
Q ss_pred ccceeeeehhhhhhhhCCCCC
Q 003931 681 KCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 681 k~DVYSfGvvlLElltgk~p~ 701 (785)
.-|.||||+++-+|+..|.|.
T Consensus 213 SLD~WS~GcmlA~miFrkepF 233 (338)
T KOG0668|consen 213 SLDMWSLGCMLASMIFRKEPF 233 (338)
T ss_pred cHHHHHHHHHHHHHHhccCcc
Confidence 359999999999999999994
No 482
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=39.84 E-value=10 Score=38.20 Aligned_cols=27 Identities=26% Similarity=0.531 Sum_probs=23.3
Q ss_pred hcccccccceeeeehhhhhhhhCCCCC
Q 003931 675 TMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 675 ~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
......+||.||.|||+.=|+.|-.|.
T Consensus 265 A~~YDKrCDlwSLGvIlYImLsGYpPF 291 (463)
T KOG0607|consen 265 ATFYDKRCDLWSLGVILYIMLSGYPPF 291 (463)
T ss_pred cccccccccHHHHHHHHHHHHhCCCCc
Confidence 345567899999999999999999994
No 483
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=37.36 E-value=25 Score=36.62 Aligned_cols=23 Identities=26% Similarity=0.521 Sum_probs=21.1
Q ss_pred cccceeeeehhhhhhhhCCCCCc
Q 003931 680 DKCDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 680 ~k~DVYSfGvvlLElltgk~p~~ 702 (785)
...|.||.||+|.-++-|-.|.|
T Consensus 232 PEVDsWsLGvLLYtLVyGtMPFD 254 (668)
T KOG0611|consen 232 PEVDSWSLGVLLYTLVYGTMPFD 254 (668)
T ss_pred CccchhhHHHHHHHHhhcccccC
Confidence 45799999999999999999987
No 484
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=36.19 E-value=23 Score=34.93 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=22.1
Q ss_pred hhhhhh-cccccccceeeeehhhhhhhhCC
Q 003931 670 TELAVT-MRVTDKCDVFSFGVVALEVMMGR 698 (785)
Q Consensus 670 ~e~~~~-~~~t~k~DVYSfGvvlLElltgk 698 (785)
+|+-.+ .+.....|+||-|+|+-|++-|+
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~ 199 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRV 199 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccC
Confidence 454443 34577889999999999999765
No 485
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=36.19 E-value=42 Score=32.79 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=21.0
Q ss_pred cccccccceeeeehhhhhhhhCCCC
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHP 700 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p 700 (785)
...+.+-|||.-|+|+-||.||..-
T Consensus 204 r~yg~~iDiWgAgCimaeMwtrspi 228 (376)
T KOG0669|consen 204 REYGPPIDIWGAGCIMAEMWTRSPI 228 (376)
T ss_pred cccCCcchhHhHHHHHHHHHccCcc
Confidence 3456788999999999999998754
No 486
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=35.01 E-value=20 Score=42.74 Aligned_cols=68 Identities=28% Similarity=0.330 Sum_probs=43.0
Q ss_pred cccccceeeeehhhhhhhhC-CCCCc---hhhhccCcc-----cccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCC
Q 003931 678 VTDKCDVFSFGVVALEVMMG-RHPGE---LITSLSGEL-----FLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPD 748 (785)
Q Consensus 678 ~t~k~DVYSfGvvlLElltg-k~p~~---~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~ 748 (785)
.+.+.|+||-|+|+.|+++- +.|.+ +..|-+.+. -..++-|+. +-++.+.-.+.+|+
T Consensus 215 L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~--------------~Rnlil~Mi~rdPs 280 (1431)
T KOG1240|consen 215 LTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKIEDVS--------------LRNLILSMIQRDPS 280 (1431)
T ss_pred cChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhCcCcc--------------HHHHHHHHHccCch
Confidence 67889999999999999985 54444 333322110 011122221 22344556789999
Q ss_pred CCCChHHHHHH
Q 003931 749 TRPSMRFVAQE 759 (785)
Q Consensus 749 ~Rp~m~~vv~~ 759 (785)
+|-+..|+.+.
T Consensus 281 ~RlSAedyL~~ 291 (1431)
T KOG1240|consen 281 KRLSAEDYLQK 291 (1431)
T ss_pred hccCHHHHHHh
Confidence 99999998765
No 487
>PF05953 Allatostatin: Allatostatin; InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=33.15 E-value=16 Score=16.83 Aligned_cols=8 Identities=38% Similarity=0.987 Sum_probs=5.6
Q ss_pred cceeeeeh
Q 003931 682 CDVFSFGV 689 (785)
Q Consensus 682 ~DVYSfGv 689 (785)
...|+||.
T Consensus 3 ~~~Y~FGL 10 (11)
T PF05953_consen 3 SPMYSFGL 10 (11)
T ss_pred CCccccCc
Confidence 45599984
No 488
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=32.69 E-value=1e+02 Score=33.14 Aligned_cols=274 Identities=18% Similarity=0.131 Sum_probs=122.7
Q ss_pred CCCcEEECCCCCCcccCCccccCCCCCcEEEcCCCcccccCCcCC---CCCCCCCEEEcccCcccccCCccccC---CCC
Q 003931 102 GKLEYLNLTENQFQGKLSPNVSKLSNLIDLRLATNKFSGPIPGDI---GSMSNLQLVELFNNSFTGQIPSSLGQ---LKN 175 (785)
Q Consensus 102 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l---~~l~~L~~L~L~~n~~~~~~~~~l~~---l~~ 175 (785)
+.+++++++.|.+....+.++..-. --+.++.|..+...-..+ ..=..+.+++++.|.....+|..+.. -..
T Consensus 165 pr~r~~dls~npi~dkvpihl~~p~--~pl~lr~c~lsskfis~l~~qsg~~~lteldls~n~~Kddip~~~n~~a~~~v 242 (553)
T KOG4242|consen 165 PRARQHDLSPNPIGDKVPIHLPQPG--NPLSLRVCELSSKFISKLLIQSGRLWLTELDLSTNGGKDDIPRTLNKKAGTLV 242 (553)
T ss_pred chhhhhccCCCcccccCCccccCCC--CccchhhhhhhhhHHHHhhhhhccccccccccccCCCCccchhHHHHhhhhhh
Confidence 4456667776666655544443211 013444444332111000 11123566677776666555543322 123
Q ss_pred CCEEEcccCcCc---ccCCccccCCcccCeeecccccccc----CCc----hhccCCCCCCEEEccCCCCccccCccccC
Q 003931 176 LQHLDLRMNALN---YTIPPELGLCTNLSYLALAVNQLSG----GLP----LSLSNLSKLNDLGLSDNFLSGEISANLIG 244 (785)
Q Consensus 176 L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~i~~----~~~----~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 244 (785)
+++++.+...+. ...+-..+.-+.++..+++.|..+. ..+ ..+..-.++ +|++..+....+-+.+++-
T Consensus 243 l~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k~~fS~~~sg-hln~~~~~~psE~lks~LL 321 (553)
T KOG4242|consen 243 LFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEKDTFSPDPSG-HLNSRPRYTPSEKLKSMLL 321 (553)
T ss_pred hhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccccccCcCccc-ccccccccCchhhhhhhhc
Confidence 555665555443 1122223344556666666554421 111 112223344 5555555443222221111
Q ss_pred CC-----CCCCEEEeecCcCccc-CCccCcCCCCCcEEECcCccccccCCh--hccCCCCCCEEECcCCcccc-cCCccC
Q 003931 245 NW-----TELESLQIQNNSFMGN-IPPEIGLLTKLQYLFLYRNNFSGPIPS--EIEKLTSLENLDLSGNQLSG-TIPPTL 315 (785)
Q Consensus 245 ~l-----~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~-~~p~~l 315 (785)
.+ +.=-.+++..|...+. .-.+-..=.+++++....|++.|.... .+..-++.+.+++..-.-.. ..+...
T Consensus 322 gla~ne~t~g~rldl~~cp~~~a~vleaci~g~R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~ 401 (553)
T KOG4242|consen 322 GLAENEATLGARLDLRRCPLERAEVLEACIFGQRVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTE 401 (553)
T ss_pred ccccccccccccCChhhccccccchhhccccceeeeEeeccccccccccccccceeeccccccccccccCCceecccccc
Confidence 00 0011234444333221 111112224578888888877654433 23344566666665432210 111111
Q ss_pred c--------CCCCCCEEEcccccccCCCC---CCCCCCCCCCEEEccCCcCcc----ccCccccccCCCcEEEecCcc
Q 003931 316 W--------NLTNLLSLQLFSNNLSGTIP---PEIGSMASLVAFDVNTNQLHG----ELPENISRLVKLNKFSVFTNN 378 (785)
Q Consensus 316 ~--------~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~l~l~~n~ 378 (785)
. .-.-+..+.++.|......- .....-+.+..+++++|.... .+|.....-..++....+.|.
T Consensus 402 a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~ 479 (553)
T KOG4242|consen 402 APPVSKKSRTHGVLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNL 479 (553)
T ss_pred chhhhhhhcccccccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCC
Confidence 1 11235677777777653222 223455788999999997643 234444444445544444443
No 489
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=31.89 E-value=13 Score=40.05 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=24.9
Q ss_pred hhhhhhcccccc-----cceeeeehhhhhhhhCCCCCc
Q 003931 670 TELAVTMRVTDK-----CDVFSFGVVALEVMMGRHPGE 702 (785)
Q Consensus 670 ~e~~~~~~~t~k-----~DVYSfGvvlLElltgk~p~~ 702 (785)
+||-..-.+-.| .|.|+.||++-|++||+.|..
T Consensus 583 pEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 583 PEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred cccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 466544444444 599999999999999999953
No 490
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=29.86 E-value=26 Score=35.51 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=25.0
Q ss_pred cccccccceeeeehhhhhhhhCCCCCchhhh
Q 003931 676 MRVTDKCDVFSFGVVALEVMMGRHPGELITS 706 (785)
Q Consensus 676 ~~~t~k~DVYSfGvvlLElltgk~p~~~~~~ 706 (785)
..+|.+.|.|+.|+++..|-.|+-|.++...
T Consensus 225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~ 255 (288)
T PF14531_consen 225 APYTFATDAWQLGITLYSLWCGRLPFGLSSP 255 (288)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHSS-STCCCGG
T ss_pred ceeeeccCHHHHHHHHHHHHHccCCCCCCCc
Confidence 4678999999999999999999999875543
No 491
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=27.31 E-value=1.2e+02 Score=32.43 Aligned_cols=26 Identities=31% Similarity=0.598 Sum_probs=22.2
Q ss_pred ccccccceeeeehhhhhhhhC-CCCCc
Q 003931 677 RVTDKCDVFSFGVVALEVMMG-RHPGE 702 (785)
Q Consensus 677 ~~t~k~DVYSfGvvlLElltg-k~p~~ 702 (785)
..+...|-|..||++.|++.| |+|..
T Consensus 197 ~r~~~hD~FGLavLiF~lL~ggrHPys 223 (637)
T COG4248 197 ERTANHDNFGLAVLIFHLLFGGRHPYS 223 (637)
T ss_pred CCCccccchhHHHHHHHHHhcCCCCCC
Confidence 456788999999999999998 99954
No 492
>PF15574 Imm28: Immunity protein 28
Probab=25.20 E-value=61 Score=27.55 Aligned_cols=64 Identities=20% Similarity=0.385 Sum_probs=37.1
Q ss_pred eeeeehhh-hhhhhCCCCCchhhhccCcccccccccCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCChHHHHHH
Q 003931 684 VFSFGVVA-LEVMMGRHPGELITSLSGELFLKDVLDQRLPPPTGQLAEAVVLTINVALACTSTTPDTRPSMRFVAQE 759 (785)
Q Consensus 684 VYSfGvvl-LElltgk~p~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ial~C~~~~p~~Rp~m~~vv~~ 759 (785)
+|+||++- +-.=.++.|+|+....-+ +.-..+ ....++..++.+.+..||+.+ .-|||-.++.+
T Consensus 31 ~Y~FGmln~la~e~~~sp~diqa~mI~------ili~~l----~ys~~~A~~~~qf~I~~Tdk~--fhPT~~aIIHR 95 (123)
T PF15574_consen 31 AYIFGMLNGLAHEESISPTDIQAAMIR------ILIEKL----GYSTEAAAQFCQFVIDCTDKE--FHPTMYAIIHR 95 (123)
T ss_pred HHHHHhhHHHHHHccCCHHHHHHHHHH------HHHHHc----CCCHHHHHHHHHHHHhccccc--cCccHHHHHHc
Confidence 69999872 334446677663221110 110111 133455667778889999874 45999988764
No 493
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=24.84 E-value=52 Score=19.20 Aligned_cols=12 Identities=50% Similarity=0.722 Sum_probs=6.8
Q ss_pred CCCCEEECcCCc
Q 003931 295 TSLENLDLSGNQ 306 (785)
Q Consensus 295 ~~L~~L~Ls~n~ 306 (785)
++|++|+|++|.
T Consensus 2 ~~L~~L~l~~C~ 13 (26)
T smart00367 2 PNLRELDLSGCT 13 (26)
T ss_pred CCCCEeCCCCCC
Confidence 455666666653
No 494
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=24.57 E-value=34 Score=37.44 Aligned_cols=14 Identities=36% Similarity=0.622 Sum_probs=6.8
Q ss_pred CCCCCEEEeecCcC
Q 003931 246 WTELESLQIQNNSF 259 (785)
Q Consensus 246 l~~L~~L~L~~n~l 259 (785)
.+.+..++|++|++
T Consensus 217 ~p~i~sl~lsnNrL 230 (585)
T KOG3763|consen 217 FPEILSLSLSNNRL 230 (585)
T ss_pred Ccceeeeecccchh
Confidence 34445555555544
No 495
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=24.32 E-value=30 Score=36.81 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=27.6
Q ss_pred hhhhhhcccccccceeeeehhhhhhhhCCCCC
Q 003931 670 TELAVTMRVTDKCDVFSFGVVALEVMMGRHPG 701 (785)
Q Consensus 670 ~e~~~~~~~t~k~DVYSfGvvlLElltgk~p~ 701 (785)
+|+-...+.+-..|-||+|+++.||+-|+.|.
T Consensus 355 PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPF 386 (591)
T KOG0986|consen 355 PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPF 386 (591)
T ss_pred HHHHcCCcccCCccHHHHHhHHHHHHcccCch
Confidence 46666677788889999999999999999995
No 496
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=22.68 E-value=45 Score=36.48 Aligned_cols=66 Identities=24% Similarity=0.143 Sum_probs=40.3
Q ss_pred cCCCCCCEEeCCCCCCCCCCcc-cc-CCCCCCcEEEccCCCCcccCCccCCC--CCCccEEECCCCCCcc
Q 003931 26 SSLRKVRYLDLGGNFLETPDWS-KF-SSMPSLTHLGLYLNELTLEFPSFILT--CRNLTYLDLSLNKLSG 91 (785)
Q Consensus 26 ~~l~~L~~L~L~~n~i~~~~~~-~f-~~l~~L~~L~L~~n~i~~~~~~~~~~--l~~L~~L~Ls~n~i~~ 91 (785)
.+.+.+..++|++|++..++.- ++ ...|.|+.|+|++|.........+.+ ...|+.|-+.+|.+..
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCcccc
Confidence 4567777788888887766421 11 34578888888888221111122322 3467888888887753
No 497
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=21.63 E-value=59 Score=43.13 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=18.4
Q ss_pred EccCCCCCCCccccccCCCCCCEEeCCCCC
Q 003931 11 SVYDNNLNGAIPFQLSSLRKVRYLDLGGNF 40 (785)
Q Consensus 11 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 40 (785)
||++|+|+.+.+..|..+++|+.|+|++|.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNP 30 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNP 30 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCc
Confidence 355666666666666666666666666654
No 498
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=20.90 E-value=34 Score=37.14 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=23.8
Q ss_pred hhhhhcccccccceeeeehhhhhhhhCCC
Q 003931 671 ELAVTMRVTDKCDVFSFGVVALEVMMGRH 699 (785)
Q Consensus 671 e~~~~~~~t~k~DVYSfGvvlLElltgk~ 699 (785)
|+-.+......-|.||.||-|.|+-|||-
T Consensus 605 EIiLG~~yd~~iD~WSvgctLYElYtGkI 633 (752)
T KOG0670|consen 605 EIILGLPYDYPIDTWSVGCTLYELYTGKI 633 (752)
T ss_pred ceeecCcccCCccceeeceeeEEeeccce
Confidence 55555666778899999999999999983
No 499
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=20.59 E-value=67 Score=42.67 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=19.8
Q ss_pred EccCCCCcccCCccCCCCCCccEEECCCCCCc
Q 003931 59 GLYLNELTLEFPSFILTCRNLTYLDLSLNKLS 90 (785)
Q Consensus 59 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 90 (785)
||++|.|+.+.+..|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 35666666666666666666666666666543
Done!