BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003932
(785 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|B Chain B, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|C Chain C, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|D Chain D, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
Length = 356
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 202/343 (58%), Gaps = 12/343 (3%)
Query: 40 ISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQG 99
++ I+ LFTHL C+ AD+NS T Q+++S +++ + + F TV+++NPS+ T+LSIG G
Sbjct: 18 VTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQTVQRRNPSVKTLLSIGGG 76
Query: 100 KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEW 159
+ + Y+SM N + RKSFIDSSIR+AR YGF GLD W P+++T+M N G L EW
Sbjct: 77 I-ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREW 135
Query: 160 RIAATKLDAKNSTRQQSLLILTARFRYSPPANS--YLLNSIQRNLNWIHAVTASYYEPVS 217
R A A+ S+ + L+L A YS S Y ++++ +L+W++ + +Y P
Sbjct: 136 RSAVV---AEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGW 192
Query: 218 TNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI 277
+ T PPAAL+ + S D ++WI+ GL A K V+ P+YGYAW L +
Sbjct: 193 SRVTGPPAALFDPSNA--GPSGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSY 250
Query: 278 GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
A G A+ G + Y +I+ I G +YNST +Y GT W G+DD +++
Sbjct: 251 YAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTNWIGYDDNQSIV 308
Query: 338 AKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQKDSITSASV 380
K+ YAK++ LLGY++W V DD+ LS+AA+Q T+A+
Sbjct: 309 TKVRYAKQRGLLGYFSWHVGADDNS-GLSRAASQAWDATTATT 350
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From
Nicotiana Tobaccum In Complex With Nag4
Length = 353
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 203/351 (57%), Gaps = 17/351 (4%)
Query: 27 IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
++ GY ++ I+ LFTHL C+ AD+N QL +S P +++ +F TV++K
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62
Query: 87 NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
NPS+ T LSI G+ N + Y M R + RKSFIDSSIR+AR GF GLD W P ++
Sbjct: 63 NPSVKTFLSIAGGR-ANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWQYPLSA 121
Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
DM N+G L +EWR A +A+NS R + L+LTA SP N +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWR-TAINTEARNSGR--AALLLTAAVSNSPRVNGLNYPVESLARNLDW 178
Query: 205 IHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
I+ + +Y P S + T A L+ ++ S + AWI+ G+ KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIPFY 235
Query: 264 GYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
GYAW LV +G+ A AAG + D G +TY +I+++I +YN+T +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDY 293
Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
+G+ W +DD + VR K+ Y K + LLGY+AW V+ D +W LS+ A+Q
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVA-GDQNWGLSRTASQ 343
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana
Tobaccum
Length = 353
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 203/351 (57%), Gaps = 17/351 (4%)
Query: 27 IRVGYLNLSEVSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKK 86
++ GY ++ I+ LFTHL C+ AD+N QL +S P +++ +F TV++K
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRK 62
Query: 87 NPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTS 146
NPS+ T LSI G+ N + Y M R + RKSFIDSSIR+AR GF GLD W P ++
Sbjct: 63 NPSVKTFLSIAGGR-ANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSA 121
Query: 147 TDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN--SYLLNSIQRNLNW 204
DM N+G L +EWR A +A+NS R + L+LTA SP N +Y + S+ RNL+W
Sbjct: 122 ADMTNLGTLLNEWR-TAINTEARNSGR--AALLLTAAVSNSPRVNGLNYPVESLARNLDW 178
Query: 205 IHAVTASYYEP-VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFY 263
I+ + +Y P S + T A L+ ++ S + AWI+ G+ KLV+ +PFY
Sbjct: 179 INLMAYDFYGPNWSPSQTNSHAQLFDPVN---HVSGSDGINAWIQAGVPTKKLVLGIPFY 235
Query: 264 GYAWTLVKPEDNGIGAAAAGPA---LYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNY 320
GYAW LV +G+ A AAG + D G +TY +I+++I +YN+T +Y
Sbjct: 236 GYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDY 293
Query: 321 FSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWLLSQAAAQ 371
+G+ W +DD + VR K+ Y K + LLGY+AW V+ D +W LS+ A+Q
Sbjct: 294 CYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVA-GDQNWGLSRTASQ 343
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 177/298 (59%), Gaps = 5/298 (1%)
Query: 447 NVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE- 505
++ L+ +SL +++ A++ FS +N LG GG+G VYKG L G ++AVK+L + QG E
Sbjct: 21 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL 80
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL-DCYLFDPIRKLILDWKK 564
+F+ EV + + H NL+R+ GFC+ ER+L+Y YM N S+ C P + LDW K
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
R I G +GL YL ++ IIHRD+K +NILL E + + DFG+A++ +
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HV 199
Query: 625 TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI--NENLSILEH 682
V GTIG+I PEY + G S K+DVF +GV+LL++I+G+R L + ++++ +L+
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 683 AYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 740
L K K VD L ++ + +++ALLC Q +P +RP M EV ML+ +
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 176/298 (59%), Gaps = 5/298 (1%)
Query: 447 NVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE- 505
++ L+ +SL +++ A++ F +N LG GG+G VYKG L G ++AVK+L + TQG E
Sbjct: 13 HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL 72
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL-DCYLFDPIRKLILDWKK 564
+F+ EV + + H NL+R+ GFC+ ER+L+Y YM N S+ C P + LDW K
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
R I G +GL YL ++ IIHRD+K +NILL E + + DFG+A++ +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HV 191
Query: 625 TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI--NENLSILEH 682
V G IG+I PEY + G S K+DVF +GV+LL++I+G+R L + ++++ +L+
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 683 AYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 740
L K K VD L ++ + +++ALLC Q +P +RP M EV ML+ +
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 4/279 (1%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
L D+E AT F + +G G +G VYKGVL G +A+K+ + S+QG EEF+ E+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF-DPIRKLILDWKKRVHIIEGITQ 574
+H +L+ ++GFC + E +LIY+YM N +L +L+ + + + W++R+ I G +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL YL + IIHRD+K NILL E PKI+DFG+++ + V GT+GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVE 694
I PEY KG + KSDV+SFGV+L +++ + + E +++ E A E G+ +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
VD L D+ P L + + A+ C+ + DRPSM +V
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 161/279 (57%), Gaps = 4/279 (1%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTA 515
L D+E AT F + +G G +G VYKGVL G +A+K+ + S+QG EEF+ E+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF-DPIRKLILDWKKRVHIIEGITQ 574
+H +L+ ++GFC + E +LIY+YM N +L +L+ + + + W++R+ I G +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL YL + IIHRD+K NILL E PKI+DFG+++ + V GT+GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVE 694
I PEY KG + KSDV+SFGV+L +++ + + E +++ E A E G+ +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
VD L D+ P L + + A+ C+ + DRPSM +V
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK+GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPIRKLI 559
++F E+ + AK QH NL+ +LGF D ++ L+Y YMPN SL C P
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---- 129
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE 619
L W R I +G G+ +L E IHRD+K +NILL EA KISDFG+AR K
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--- 676
+ ++VGT Y+ PE A +G + KSD++SFGV+LL+II+G L ++E+
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREP 240
Query: 677 -LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
L + + +++D ++D +S + +A C+ E N RP + +V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 736 MLKNETTN 743
+L+ T +
Sbjct: 300 LLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK+GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPIRKLI 559
++F E+ + AK QH NL+ +LGF D ++ L+Y YMPN SL C P
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---- 129
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE 619
L W R I +G G+ +L E IHRD+K +NILL EA KISDFG+AR K
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--- 676
+ ++VGT Y+ PE A +G + KSD++SFGV+LL+II+G L ++E+
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREP 240
Query: 677 -LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
L + + +++D ++D +S + +A C+ E N RP + +V
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 736 MLKNETTN 743
+L+ T +
Sbjct: 300 LLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 33/308 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK+GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 67
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPIRKLI 559
++F E+ + AK QH NL+ +LGF D ++ L+Y YMPN SL C P
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP---- 123
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE 619
L W R I +G G+ +L E IHRD+K +NILL EA KISDFG+AR K
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--- 676
+ ++VGT Y+ PE A +G + KSD++SFGV+LL+II+G L ++E+
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREP 234
Query: 677 -LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
L + + +++D ++D +S + +A C+ E N RP + +V
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
Query: 736 MLKNETTN 743
+L+ T +
Sbjct: 294 LLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 158/308 (51%), Gaps = 33/308 (10%)
Query: 454 YSLADIEAATERFSIR------NKLGEGGYGPVYKGVLPCGEVIAVKKLSK----TSTQG 503
+S +++ T F R NK GEGG+G VYKG + +AVKKL+ T+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 64
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPIRKLI 559
++F E+ + AK QH NL+ +LGF D ++ L+Y Y PN SL C P
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP---- 120
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE 619
L W R I +G G+ +L E IHRD+K +NILL EA KISDFG+AR K
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--- 676
+ ++VGT Y PE A +G + KSD++SFGV+LL+II+G L ++E+
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG-----LPAVDEHREP 231
Query: 677 -LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
L + + +++D +D +S + +A C+ E N RP + +V
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDKKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
Query: 736 MLKNETTN 743
+L+ T +
Sbjct: 291 LLQEXTAS 298
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase
Length = 366
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 159/330 (48%), Gaps = 31/330 (9%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 29 LCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNFGTQK 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 85 FTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFTTLVQ 139
Query: 167 DAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY---YEP 215
D N+ +Q++ R S P +Y+ ++ I +NL++++ + + +E
Sbjct: 140 DLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEK 199
Query: 216 VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
V T +P + + D ++ W+E+G A KL++ +P YG ++TL D
Sbjct: 200 V-TGHNSPLYKRQEESGAAASLNVDAAVQQWLEKGTPASKLILGMPTYGRSFTLASSSDT 258
Query: 276 GIGAAAA-----GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
+GA A GP + G++ Y ++ + +Q +V Y W GF
Sbjct: 259 RVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQ-----DQKVPYIFRDNQWVGF 313
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
DDVE+ + K++Y K+K L G W + DD
Sbjct: 314 DDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Glucoallosamidin B
pdb|1HKJ|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Methylallosamidin
pdb|1HKM|A Chain A, High Resolution Crystal Structure Of Human Chitinase In
Complex With Demethylallosamidin
Length = 365
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 31/330 (9%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 29 LCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNFGTQK 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 85 FTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFTTLVQ 139
Query: 167 DAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY---YEP 215
D N+ +Q++ R S P +Y+ ++ I +NL++++ + + +E
Sbjct: 140 DLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEK 199
Query: 216 VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
V T +P + + D ++ W+++G A KL++ +P YG ++TL D
Sbjct: 200 V-TGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDT 258
Query: 276 GIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
+GA A G P + G++ Y ++ + +Q +V Y W GF
Sbjct: 259 RVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQ-----KVPYIFRDNQWVGF 313
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
DDVE+ + K++Y K+K L G W + DD
Sbjct: 314 DDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Chitobiose
pdb|1LG2|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Ethylene Glycol
pdb|1LQ0|A Chain A, Crystal Structure Of Human Chitotriosidase At 2.2 Angstrom
Resolution
Length = 365
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 31/330 (9%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 29 LCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNFGTQK 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 85 FTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFTTLVQ 139
Query: 167 DAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY---YEP 215
D N+ +Q++ R S P +Y+ ++ I +NL++++ + + +E
Sbjct: 140 DLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEK 199
Query: 216 VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
V T +P + + D ++ W+++G A KL++ +P YG ++TL D
Sbjct: 200 V-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDT 258
Query: 276 GIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
+GA A G P + G++ Y ++ + +Q +V Y W GF
Sbjct: 259 RVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQ-----KVPYIFRDNQWVGF 313
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
DDVE+ + K++Y K+K L G W + DD
Sbjct: 314 DDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In
Complex With Allosamidin
Length = 364
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 31/330 (9%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 29 LCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNFGTQK 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 85 FTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFTTLVQ 139
Query: 167 DAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY---YEP 215
D N+ +Q++ R S P +Y+ ++ I +NL++++ + + +E
Sbjct: 140 DLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEK 199
Query: 216 VSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
V T +P + + D ++ W+++G A KL++ +P YG ++TL D
Sbjct: 200 V-TGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDT 258
Query: 276 GIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
+GA A G P + G++ Y ++ + +Q +V Y W GF
Sbjct: 259 RVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQ-----KVPYIFRDNQWVGF 313
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
DDVE+ + K++Y K+K L G W + DD
Sbjct: 314 DDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Human
Chitinase
pdb|1WB0|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argifin Against Human
Chitinase
Length = 445
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 31/334 (9%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
++ L THLI + A + T +QLS + +DE +F + +KK NP + T+L+IG G +
Sbjct: 25 LDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEF-NGLKKMNPKLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIA 162
++ MV +++R++F++S+IR R Y F GLD W P + D+ R
Sbjct: 81 GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSP-----AVDKERFT 135
Query: 163 ATKLDAKNSTRQQSLLILTARFRYS---PPANSYL-----LNSIQRNLNWIHAVTASY-- 212
D N+ +Q++ R S P +Y+ ++ I +NL++++ + +
Sbjct: 136 TLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 213 -YEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVK 271
+E V T +P + + D ++ W+++G A KL++ +P YG ++TL
Sbjct: 196 SWEKV-TGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 272 PEDNGIGAAAAG-----PALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTV 326
D +GA A G P + G++ Y ++ + +Q +V Y
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQ-----KVPYIFRDNQ 309
Query: 327 WFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
W GFDDVE+ + K++Y K+K L G W + DD
Sbjct: 310 WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|B Chain B, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|C Chain C, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|D Chain D, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|E Chain E, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|F Chain F, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|G Chain G, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|H Chain H, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|I Chain I, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|J Chain J, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|K Chain K, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|L Chain L, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
Length = 365
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 18/322 (5%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L +HLI S A I + + E + + +++K KNP + +LSIG G
Sbjct: 30 LCSHLIYSFASIENNKVIIK---DKSEVMLYQTINSLKTKNPKLKILLSIG-GYLFGSKG 85
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+ MV +S+ R FI+S I R + F GLD +W P+ + + +L E A K
Sbjct: 86 FHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQKENT-HFTVLIHELAEAFQK- 143
Query: 167 DAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVT----ASYYEPVSTNFTA 222
D ST+++ LL NSY + + ++L++I+ ++ S+ +P+ T +
Sbjct: 144 DFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNS 203
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN----GIG 278
P + + + + + WI +G+ ++K+VM +P YG+++TL E G
Sbjct: 204 PLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASAETTVGAPASG 263
Query: 279 AAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRA 338
AAGP SG + Y +I +K G + + + +V Y G W G+DDV+++
Sbjct: 264 PGAAGPITESSGFLAYYEICQFLK--GAKITRLQDQ--QVPYAVKGNQWVGYDDVKSMET 319
Query: 339 KIAYAKEKRLLGYYAWQVSFDD 360
K+ + K L G W + DD
Sbjct: 320 KVQFLKNLNLGGAMIWSIDMDD 341
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 68
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 69 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 126
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 127 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 182
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 230
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 231 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 125
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 181
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 229
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 230 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 69
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 70 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 127
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 128 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 183
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 231
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 232 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 268
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 73
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 74 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 131
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGYI 635
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +E+N E I +
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWT 183
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVE 694
PE G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------- 235
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 236 -----VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 272
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 125
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGYI 635
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +E+N E I +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWT 177
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVE 694
PE G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------- 229
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 230 -----VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 72
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 73 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 130
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGYI 635
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +E+N E I +
Sbjct: 131 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWT 182
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVE 694
PE G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 183 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------- 234
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 235 -----VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 271
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 74 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 131
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 187
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 235
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 236 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 125
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 181
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 229
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 230 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 75
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 76 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 133
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 134 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 189
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 237
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 238 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 77
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 78 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 135
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGYI 635
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +E+N E I +
Sbjct: 136 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWT 187
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVE 694
PE G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 188 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------- 239
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 240 -----VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 276
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 62
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 63 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGYI 635
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +E+N E I +
Sbjct: 121 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWT 172
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVE 694
PE G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------- 224
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 225 -----VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 261
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 76
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 77 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 134
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 135 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 190
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 238
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 239 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 275
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 24/281 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 68 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 125
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+E + IHRDL+ +NIL+ + + KI+DFG+AR+ +++ E I + PE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEA 181
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFVDS 698
G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------ 229
Query: 699 FLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 230 -VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 266
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|B Chain B, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|C Chain C, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|D Chain D, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FY1|A Chain A, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3FY1|B Chain B, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3RM4|A Chain A, Amcase In Complex With Compound 1
pdb|3RM4|B Chain B, Amcase In Complex With Compound 1
pdb|3RM8|A Chain A, Amcase In Complex With Compound 2
pdb|3RM8|B Chain B, Amcase In Complex With Compound 2
pdb|3RM9|A Chain A, Amcase In Complex With Compound 3
pdb|3RM9|B Chain B, Amcase In Complex With Compound 3
pdb|3RME|A Chain A, Amcase In Complex With Compound 5
pdb|3RME|B Chain B, Amcase In Complex With Compound 5
Length = 395
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
IN L THLI + A + + ++ ++ + + + +K KN + T+L+IG G +
Sbjct: 25 INPCLCTHLIYAFAGMQNNEI---TTIEWNDVTLYQAFNGLKNKNSQLKTLLAIG-GWNF 80
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDE 158
+ +++MV +R++FI S I+ R Y F GLDF W P + D +L E
Sbjct: 81 GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQE 140
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
R A + +AK + + ++ S + Y + + + L++IH +T +
Sbjct: 141 MR-EAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWE- 198
Query: 219 NFTAPPAALY--GSISGRFAR-STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
+T + LY + +G A + D V+ W + G A+KL++ P YG+ + L P +
Sbjct: 199 GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNT 258
Query: 276 GI-----GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
GI GA AGP +SG+ Y +I +K +++ EV Y G VW G+
Sbjct: 259 GIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNVWVGY 315
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
D+V++ K + K + G W + DD
Sbjct: 316 DNVKSFDIKAQWLKHNKFGGAMVWAIDLDD 345
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBU|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
Length = 381
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 43 INYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDT 102
IN L THLI + A + + ++ ++ + + + +K KN + T+L+IG G +
Sbjct: 29 INPCLCTHLIYAFAGMQNNEI---TTIEWNDVTLYQAFNGLKNKNSQLKTLLAIG-GWNF 84
Query: 103 NYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDE 158
+ +++MV +R++FI S I+ R Y F GLDF W P + D +L E
Sbjct: 85 GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQE 144
Query: 159 WRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVST 218
R A + +AK + + ++ S + Y + + + L++IH +T +
Sbjct: 145 MR-EAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWE- 202
Query: 219 NFTAPPAALYG--SISGRFAR-STDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDN 275
+T + LY + +G A + D V+ W + G A+KL++ P YG+ + L P +
Sbjct: 203 GYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNT 262
Query: 276 GI-----GAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGF 330
GI GA AGP +SG+ Y +I +K +++ EV Y G VW G+
Sbjct: 263 GIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNVWVGY 319
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
D++++ K + K + G W + DD
Sbjct: 320 DNIKSFDIKAQWLKHNKFGGAMVWAIDLDD 349
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L + S + F E L +LQH
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQH 63
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
L+R+ + E +I EYM N SL +L P + L K + + I +G+ ++
Sbjct: 64 QRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGYI 635
+E + IHR+L+ +NIL+ + + KI+DFG+AR+ +E+N E I +
Sbjct: 122 EERN---YIHRNLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWT 173
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVE 694
PE G ++ KSDV+SFG+LL +I++ R+ N E + LE Y +
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------- 225
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ N P +L + + LC +E P DRP+ + S+L++
Sbjct: 226 -----VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVLED 262
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 20/283 (7%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN 509
NL S+ E ++++KLG G YG VY GV + K K T EEF
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK 77
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + +++H NL+++LG C ++ EYMP +L YL + R+ + +++
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMA 136
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
I+ + YL+ + IHRDL N L+GE K++DFG++R+ ++ +
Sbjct: 137 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKG 689
I + PE +S KSDV++FGVLL +I + +S GI+ L Y+L +
Sbjct: 194 -PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYDLLEK 246
Query: 690 GKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
G +E P K+ E+ C + +P DRPS E
Sbjct: 247 GYRME------QPEGCPPKV---YELMRACWKWSPADRPSFAE 280
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 136
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 195
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +E R
Sbjct: 196 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYELLEKDYRME--------RPEG 241
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 242 CP-EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 131
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 190
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 191 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 236
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 237 CP-EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 136
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFS 195
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 196 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 241
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 242 CP-EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 136
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 195
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 196 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 241
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 242 CP-EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 135
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 194
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 195 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 240
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 241 CP-EKVYELMRACWQWNPSDRPSFAEI 266
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEY 582
G C +I E+M +L YL + R+ ++L +++ I+ + YL+
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE-- 335
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATK 642
+ IHR+L N L+GE K++DFG++R+ ++ + I + PE
Sbjct: 336 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 393
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDD 702
+S KSDV++FGVLL +I + +S GI+ L YEL + +
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRME 439
Query: 703 RNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
R C + E+ C Q NP+DRPS E+
Sbjct: 440 RPEGCP-EKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 131
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 190
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 191 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 236
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 237 CP-EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 335
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHR+L N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 394
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 395 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 440
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 441 CP-EKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 133
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 192
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 193 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 238
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 239 CP-EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 132
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFS 191
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 192 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 237
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 238 CP-EKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 136
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 195
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 196 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 241
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 242 CP-EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 20/272 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 377
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHR+L N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 436
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 437 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 482
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 738
C + E+ C Q NP+DRPS E+ +
Sbjct: 483 CP-EKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 133
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 192
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 193 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 238
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 239 CP-EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEY 582
G C +I E+M +L YL + R+ ++L +++ I+ + YL+
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE-- 133
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATK 642
+ IHRDL N L+GE K++DFG++R+ ++ + I + PE
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 191
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDD 702
+S KSDV++FGVLL +I + +S GI+ L YEL + +
Sbjct: 192 NKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRME 237
Query: 703 RNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
R C + E+ C Q NP+DRPS E+
Sbjct: 238 RPEGCP-EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEY 582
G C +I E+M +L YL + R+ ++L +++ I+ + YL+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE-- 128
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATK 642
+ IHRDL N L+GE K++DFG++R+ ++ + I + PE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDD 702
+S KSDV++FGVLL +I + +S GI+ L YEL + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRME 232
Query: 703 RNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
R C + E+ C Q NP+DRPS E+
Sbjct: 233 RPEGCP-EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEY 582
G C +I E+M +L YL + R+ ++L +++ I+ + YL+
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE-- 128
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATK 642
+ IHRDL N L+GE K++DFG++R+ ++ + I + PE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDD 702
+S KSDV++FGVLL +I + +S GI+ L YEL + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRME 232
Query: 703 RNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
R C + E+ C Q NP+DRPS E+
Sbjct: 233 RPEGCP-EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 144
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ + I + PE +S
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFS 203
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 204 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 249
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 250 CP-EKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEY 582
G C +I E+M +L YL + R+ ++L +++ I+ + YL+
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE-- 128
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATK 642
+ IHRDL N L+GE K++DFG++R+ ++ + I + PE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDD 702
+S KSDV++FGVLL +I + +S GI+ L YEL + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRME 232
Query: 703 RNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
R C + E+ C Q NP+DRPS E+
Sbjct: 233 RPEGCP-EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEY 582
G C +I E+M +L YL + R+ ++L +++ I+ + YL+
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE-- 128
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATK 642
+ IHRDL N L+GE K++DFG++R+ ++ + I + PE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 186
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDD 702
+S KSDV++FGVLL +I + +S GI+ L YEL + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRME 232
Query: 703 RNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
R C + E+ C Q NP+DRPS E+
Sbjct: 233 RPEGCP-EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 42/328 (12%)
Query: 452 RVYSLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF 504
+ S++D+ E + ++ LG G +G VY+G + P +AVK L + ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 505 E-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLI 559
E +F E ++ +KL H N++R +G + S R ++ E M L +L + P +
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIF 616
L +H+ I G YL+E IHRD+ N LL G KI DFGMAR
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ S + + ++PPE +G++++K+D +SFGVLL +I S + N+
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 677 LSILEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---M 730
+ +EFV S +N P + R I C Q P DRP+ +
Sbjct: 255 V---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAII 296
Query: 731 LEVSSMLKNETTNINTPKKPAFSKQVDE 758
LE + INT + V+E
Sbjct: 297 LERIEYCTQDPDVINTALPIEYGPLVEE 324
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +KL H N++R +G + S R ++ E M L +L + P + L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 269
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 270 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 313
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 314 IEYCTQDPDVINTALPIEYGPLVEE 338
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 135/285 (47%), Gaps = 32/285 (11%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
SL E ++++KLG G YG VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIE 570
+++H NL+++LG C +I E+M +L YL + R+ ++L +++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMAT 116
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I+ + YL+ + IHRDL N L+GE K++DFG++R+ ++ +
Sbjct: 117 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF- 172
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--LSILEHAYELWK 688
I + PE +S KSDV++FGVLL +I + +S GI+ + +LE Y +
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDPSQVYELLEKDYRM-- 229
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+R C + E+ C Q NP+DRPS E+
Sbjct: 230 -------------ERPEGCP-EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 322 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAY 378
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 433
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 483
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 484 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 532
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 135/285 (47%), Gaps = 32/285 (11%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
SL E ++++KLG G YG VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIE 570
+++H NL+++LG C +I E+M +L YL + R+ ++L +++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMAT 116
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I+ + YL+ + IHRDL N L+GE K++DFG++R+ ++ +
Sbjct: 117 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF- 172
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--LSILEHAYELWK 688
I + PE +S KSDV++FGVLL +I + +S GI+ + +LE Y +
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDPSQVYELLEKDYRM-- 229
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+R C + E+ C Q NP+DRPS E+
Sbjct: 230 -------------ERPEGCP-EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|C Chain C, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|D Chain D, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJW|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJW|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJX|A Chain A, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|B Chain B, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|C Chain C, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|D Chain D, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1NWR|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWS|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWT|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWU|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
Length = 362
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 23/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHIIYSFANISNDHID---TWEWNDVTLYGMLNTLKNRNPNLKTLLSVG-GWNFGSQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + N+ R++FI S R +GF GLD AW P D + L E + K
Sbjct: 85 FSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKQHFTTLIKEMKAEFIK- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPV--STNFTA 222
+A+ +Q L+L+A +SY + I ++L++I +T ++ +T +
Sbjct: 143 EAQPGKKQ---LLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHS 199
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
P S +TD + + G A KLVM +P +G ++TL E G+GA +
Sbjct: 200 PLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSE-TGVGAPIS 258
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + ++G + Y +I + ++ G V + +V Y + G W G+DD E+V+
Sbjct: 259 GPGIPGRFTKEAGTLAYYEICDFLR--GATVHRILGQ--QVPYATKGNQWVGYDDQESVK 314
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
+K+ Y K+++L G W + DD
Sbjct: 315 SKVQYLKDRQLAGAMVWALDLDD 337
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 132
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ I + PE +S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFS 191
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 192 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 237
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 238 CP-EKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 162/368 (44%), Gaps = 44/368 (11%)
Query: 413 KYNQMKRLNLIEEDSAKASNTRANNETEAGDFNRNVPNL-RVYSLADI-EAATERFSIRN 470
K+ +++ + + E S + ++ T D+N N + S++D+ E + ++
Sbjct: 5 KHQELQAMQM-ELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIR 63
Query: 471 KLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
LG G +G VY+G + P +AVK L + ++ E +F E ++ +K H N++
Sbjct: 64 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDWKKRVHIIEGITQGLLYL 579
R +G + S R ++ E M L +L + P + L +H+ I G YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 580 QEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+E IHRD+ N LL G KI DFGMAR + S + + ++P
Sbjct: 184 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFV 696
PE +G++++K+D +SFGVLL +I S + N+ + +EFV
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---------------LEFV 285
Query: 697 DS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEVSSMLKNETTNINTPKKP 750
S +N P + R I C Q P DRP+ +LE + INT
Sbjct: 286 TSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPI 342
Query: 751 AFSKQVDE 758
+ V+E
Sbjct: 343 EYGPLVEE 350
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 20/267 (7%)
Query: 467 SIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
++++KLG G YG VY+GV + K K T EEF E + +++H NL+++L
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +I E+M +L YL + R+ + + +++ I+ + YL+ +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKN 133
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IHRDL N L+GE K++DFG++R+ ++ I + PE +S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFS 192
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
KSDV++FGVLL +I + +S GI+ L YEL + +R
Sbjct: 193 IKSDVWAFGVLLWEIAT-YGMSPYPGID-----LSQVYEL--------LEKDYRMERPEG 238
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEV 733
C + E+ C Q NP+DRPS E+
Sbjct: 239 CP-EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 20/275 (7%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L K + KK + I +G+
Sbjct: 66 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMD 122
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E KI DFG+A + ++ S EQ+ G+I ++ P
Sbjct: 123 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVE 694
E YS +SDV++FG++L ++++G+ IN I+E G+G
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL--PYSNINNRDQIIEMV------GRGSL 231
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
D N P ++ R + C+++ ++RPS
Sbjct: 232 SPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPS 263
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 9/226 (3%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 14 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 73
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
+ FKNEV + K +HVN++ +G+ + ++ ++ SL +L I + +
Sbjct: 74 QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEM 130
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K + I QG+ YL S IIHRDLK +NI L E + KI DFG+A + ++ S
Sbjct: 131 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 187
Query: 623 ENTEQVVGTIGYIPPE---YATKGVYSTKSDVFSFGVLLLQIISGK 665
EQ+ G+I ++ PE K YS +SDV++FG++L ++++G+
Sbjct: 188 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 118/226 (52%), Gaps = 9/226 (3%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 15 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
+ FKNEV + K +HVN++ +G+ + ++ ++ SL +L I + +
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEM 131
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K + I QG+ YL S IIHRDLK +NI L E + KI DFG+A + ++ S
Sbjct: 132 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 188
Query: 623 ENTEQVVGTIGYIPPE---YATKGVYSTKSDVFSFGVLLLQIISGK 665
EQ+ G+I ++ PE K YS +SDV++FG++L ++++G+
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 452 RVYSLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF 504
+ S++D+ E + ++ LG G +G VY+G + P +AVK L + ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 505 E-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLI 559
E +F E ++ +K H N++R +G + S R ++ E M L +L + P +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIF 616
L +H+ I G YL+E IHRD+ N LL G KI DFGMAR
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ S + + ++PPE +G++++K+D +SFGVLL +I S + N+
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 677 LSILEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---M 730
+ +EFV S +N P + R I C Q P DRP+ +
Sbjct: 255 V---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAII 296
Query: 731 LEVSSMLKNETTNINTPKKPAFSKQVDE 758
LE + INT + V+E
Sbjct: 297 LERIEYCTQDPDVINTALPIEYGPLVEE 324
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAY 295
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 400
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 401 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +K H N++R +G + S R ++ E M L +L + P + L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 147 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 261
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 262 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 305
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 306 IEYCTQDPDVINTALPIEYGPLVEE 330
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 9/211 (4%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + + ++ ++ SL +L I + + K + I QG+
Sbjct: 62 RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 118
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E + KI DFG+A + ++ S EQ+ G+I ++ P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGK 665
E K YS +SDV++FG++L ++++G+
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +K H N++R +G + S R ++ E M L +L + P + L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 269
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 270 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 313
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 314 IEYCTQDPDVINTALPIEYGPLVEE 338
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERMLIY-EYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + I EYM SL +L K L + V + I G+ Y
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAY 295
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 400
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 401 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L I + + K + I QG+
Sbjct: 67 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 123
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E + KI DFG+A + ++ S EQ+ G+I ++ P
Sbjct: 124 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGK 665
E K YS +SDV++FG++L ++++G+
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L I + + K + I QG+
Sbjct: 67 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 123
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E + KI DFG+A + ++ S EQ+ G+I ++ P
Sbjct: 124 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGK 665
E K YS +SDV++FG++L ++++G+
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L I + + K + I QG+
Sbjct: 64 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 120
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E + KI DFG+A + ++ S EQ+ G+I ++ P
Sbjct: 121 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGK 665
E K YS +SDV++FG++L ++++G+
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +K H N++R +G + S R ++ E M L +L + P + L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 132 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 246
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 247 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 290
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 291 IEYCTQDPDVINTALPIEYGPLVEE 315
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAY 295
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 400
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 401 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 449
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +K H N++R +G + S R ++ E M L +L + P + L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 254
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 255 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 298
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 299 IEYCTQDPDVINTALPIEYGPLVEE 323
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1
Suggests A Saccharide Binding Site
pdb|1VF8|A Chain A, The Crystal Structure Of Ym1 At 1.31 A Resolution
Length = 377
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 25/328 (7%)
Query: 47 LFTHLICSSADI--NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY 104
L THLI + A + N TY L E + +K KN + T+L+IG G
Sbjct: 29 LCTHLIYAFAGMQNNEITYTHEQDLRDYEA-----LNGLKDKNTELKTLLAIG-GWKFGP 82
Query: 105 SIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT----STDMFNIGLLFDEWR 160
+ +S+MV +R+ FI S IR R Y F GL+ W P + D +L E R
Sbjct: 83 APFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMR 142
Query: 161 IAATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRNLNWIHAVTASYYEPVSTNF 220
A + + + LL T + Y + + ++L++I +T ++P +
Sbjct: 143 KAFEEESVEKDIPRL-LLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDP-KDGY 200
Query: 221 TAPPAALYGS---ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI 277
T + LY S I + D ++ W + G +++KL++ P YG+ + L P GI
Sbjct: 201 TGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFILSDPSKTGI 260
Query: 278 GA---AAAGPALY--DSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDD 332
GA + P Y +SGL+ Y ++ + +V +++ EV Y G W G+D+
Sbjct: 261 GAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEV---WDAPQEVPYAYQGNEWVGYDN 317
Query: 333 VEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
V + + K + K+ L G W + DD
Sbjct: 318 VRSFKLKAQWLKDNNLGGAVVWPLDMDD 345
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 452 RVYSLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF 504
+ S++D+ E + ++ LG G +G VY+G + P +AVK L + ++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 505 E-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLI 559
E +F E ++ +K H N++R +G + S R ++ E M L +L + P +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIF 616
L +H+ I G YL+E IHRD+ N LL G KI DFGMAR
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ S + + ++PPE +G++++K+D +SFGVLL +I S + N+
Sbjct: 194 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Query: 677 LSILEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---M 730
+ +EFV S +N P + R I C Q P DRP+ +
Sbjct: 254 V---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAII 295
Query: 731 LEVSSMLKNETTNINTPKKPAFSKQVDE 758
LE + INT + V+E
Sbjct: 296 LERIEYCTQDPDVINTALPIEYGPLVEE 323
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKT-STQGFEE 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + S Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +K H N++R +G + S R ++ E M L +L + P + L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 269
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 270 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 313
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 314 IEYCTQDPDVINTALPIEYGPLVEE 338
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 455 SLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGFE-E 506
S++D+ E + ++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 507 FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLILDW 562
F E ++ +K H N++R +G + S R ++ E M L +L + P + L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKE 619
+H+ I G YL+E IHRD+ N LL G KI DFGMAR +
Sbjct: 157 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 620 SLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
S + + ++PPE +G++++K+D +SFGVLL +I S + N+ +
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-- 271
Query: 680 LEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---MLEV 733
+EFV S +N P + R I C Q P DRP+ +LE
Sbjct: 272 -------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILER 315
Query: 734 SSMLKNETTNINTPKKPAFSKQVDE 758
+ INT + V+E
Sbjct: 316 IEYCTQDPDVINTALPIEYGPLVEE 340
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L I + + K + I QG+
Sbjct: 62 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 118
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E + KI DFG+A + ++ S EQ+ G+I ++ P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGK 665
E K YS +SDV++FG++L ++++G+
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 64 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 120
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 175
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 225
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 226 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 274
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 32/285 (11%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
SL E ++++KLG G +G VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRK----LILDWKKRVHIIE 570
+++H NL+++LG C +I E+M +L YL + R+ ++L +++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMAT 116
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I+ + YL+ + IHRDL N L+GE K++DFG++R+ ++ +
Sbjct: 117 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF- 172
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN--LSILEHAYELWK 688
I + PE +S KSDV++FGVLL +I + +S GI+ + +LE Y +
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDPSQVYELLEKDYRM-- 229
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+R C + E+ C Q NP+DRPS E+
Sbjct: 230 -------------ERPEGCP-EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 62 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 118
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 173
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 223
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 224 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 272
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 26/294 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKH 63
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L D + L V + + G+ Y
Sbjct: 64 DKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAY 120
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ IHRDL+ +NIL+G + KI+DFG+AR+ E E Q I + P
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAP 175
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVD 697
E A G ++ KSDV+SFG+LL ++++ R+ G+N N +LE VE
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGRVP-YPGMN-NREVLEQ----------VERGY 223
Query: 698 SFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
++ P L E+ + C +++P +RP+ + S L++ T +P
Sbjct: 224 RMPCPQDCPISLH---ELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 33/286 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + +LG G +G V+ G +AVK L K T + F E L LQH
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 67
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSL-DCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+R+ E +I EYM SL D D K++L K + I +G+ Y
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAY 125
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGY 634
++ R IHRDL+ +N+L+ E++ KI+DFG+AR+ +E+N E I +
Sbjct: 126 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARV-----IEDNEYTAREGAKFPIKW 177
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN-LSILEHAYELWKGGKGV 693
PE G ++ KSDV+SFG+LL +I++ ++ N + ++ L Y + + V
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPR----V 233
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
E N P +L +I +C +E +RP+ + S+L +
Sbjct: 234 E---------NCPDEL---YDIMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 20/275 (7%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + + ++ ++ SL +L K + KK + I +G+
Sbjct: 78 RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMD 134
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E KI DFG+A ++ S EQ+ G+I ++ P
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVE 694
E YS +SDV++FG++L ++++G+ IN I+E G+G
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL--PYSNINNRDQIIEMV------GRGSL 243
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
D N P ++ R + C+++ ++RPS
Sbjct: 244 SPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPS 275
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K E F E + KL+H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRH 239
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 240 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAY 296
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+ R+ E E Q I + P
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAP 351
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 352 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 401
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 402 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPG 450
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 452 RVYSLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF 504
+ S++D+ E + ++ LG G +G VY+G + P +AVK L + ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 505 E-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLI 559
E +F E ++ +K H N++R +G + S R ++ E M L +L + P +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIF 616
L +H+ I G YL+E IHRD+ N LL G KI DFGMA+
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI 194
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ S + + ++PPE +G++++K+D +SFGVLL +I S + N+
Sbjct: 195 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 677 LSILEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---M 730
+ +EFV S +N P + R I C Q P DRP+ +
Sbjct: 255 V---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAII 296
Query: 731 LEVSSMLKNETTNINTPKKPAFSKQVDE 758
LE + INT + V+E
Sbjct: 297 LERIEYCTQDPDVINTALPIEYGPLVEE 324
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 144/328 (43%), Gaps = 42/328 (12%)
Query: 452 RVYSLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF 504
+ S++D+ E + ++ LG G +G VY+G + P +AVK L + ++
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117
Query: 505 E-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLI 559
E +F E ++ +K H N++R +G + S R ++ E M L +L + P +
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIF 616
L +H+ I G YL+E IHRD+ N LL G KI DFGMAR
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ + + ++PPE +G++++K+D +SFGVLL +I S + N+
Sbjct: 235 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 294
Query: 677 LSILEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---M 730
+ +EFV S +N P + R I C Q P DRP+ +
Sbjct: 295 V---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAII 336
Query: 731 LEVSSMLKNETTNINTPKKPAFSKQVDE 758
LE + INT + V+E
Sbjct: 337 LERIEYCTQDPDVINTALPIEYGPLVEE 364
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 144/328 (43%), Gaps = 42/328 (12%)
Query: 452 RVYSLADI-EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTSTQGF 504
+ S++D+ E + ++ LG G +G VY+G + P +AVK L + ++
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 94
Query: 505 E-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFD----PIRKLI 559
E +F E ++ +K H N++R +G + S R ++ E M L +L + P +
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 560 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIF 616
L +H+ I G YL+E IHRD+ N LL G KI DFGMAR
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 211
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ + + ++PPE +G++++K+D +SFGVLL +I S + N+
Sbjct: 212 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 271
Query: 677 LSILEHAYELWKGGKGVEFVDS---FLDDRNSPCKLMRCLEIALLCVQENPNDRPS---M 730
+ +EFV S +N P + R I C Q P DRP+ +
Sbjct: 272 V---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAII 313
Query: 731 LEVSSMLKNETTNINTPKKPAFSKQVDE 758
LE + INT + V+E
Sbjct: 314 LERIEYCTQDPDVINTALPIEYGPLVEE 341
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 9/226 (3%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 15 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
+ FKNEV + K +HVN++ +G+ + ++ ++ SL +L I + +
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEM 131
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K + I QG+ YL S IIHRDLK +NI L E + KI DFG+A ++ S
Sbjct: 132 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 188
Query: 623 ENTEQVVGTIGYIPPE---YATKGVYSTKSDVFSFGVLLLQIISGK 665
EQ+ G+I ++ PE K YS +SDV++FG++L ++++G+
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + K++H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 9/226 (3%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQ 502
D NR R S D E + ++ ++G G +G VYKG + + ++ + Q
Sbjct: 7 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 66
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
+ FKNEV + K +HVN++ +G+ + ++ ++ SL +L I + +
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEM 123
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K + I QG+ YL S IIHRDLK +NI L E + KI DFG+A ++ S
Sbjct: 124 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 180
Query: 623 ENTEQVVGTIGYIPPE---YATKGVYSTKSDVFSFGVLLLQIISGK 665
EQ+ G+I ++ PE K YS +SDV++FG++L ++++G+
Sbjct: 181 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 142/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 63 EKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAY 119
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 174
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 175 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 224
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 225 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 273
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 20/275 (7%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L K + KK + I +G+
Sbjct: 78 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMD 134
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E KI DFG+A ++ S EQ+ G+I ++ P
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVE 694
E YS +SDV++FG++L ++++G+ IN I+E G+G
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL--PYSNINNRDQIIEMV------GRGSL 243
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
D N P ++ R + C+++ ++RPS
Sbjct: 244 SPDLSKVRSNCPKRMKRLMA---ECLKKKRDERPS 275
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 36/289 (12%)
Query: 468 IRNKLGEGGYGPVYKGVL--PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ C E ++AVK L S ++F E L LQH +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL--FDPIRKLI--------LDWKKRVHIIEG 571
+++ G C++ + ++++EYM + L+ +L P L+ L + +HI +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I G++YL + +HRDL N L+GE + KI DFGM+R +
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGG 690
I ++PPE ++T+SDV+S GV+L +I + GK+ NE + + L +
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR-- 251
Query: 691 KGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
R P ++ E+ L C Q P+ R ++ + ++L+N
Sbjct: 252 -----------PRTCPQEV---YELMLGCWQREPHMRKNIKGIHTLLQN 286
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 66 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAY 122
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 177
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 178 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 227
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 228 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 276
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM L +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM L +L + K L + V + I G+ Y
Sbjct: 73 EKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAY 129
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 234
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C +++P +RP+ + + L++ T+ +P
Sbjct: 235 ---------PCP-PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 38/290 (13%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ +LP + ++AVK L + S ++F+ E L LQH +
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL--FDPIRKLI----------LDWKKRVHII 569
++R G C + ++++EYM + L+ +L P KL+ L + + +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
+ G++YL + L +HRDL N L+G+ + KI DFGM+R + +
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWK 688
I ++PPE ++T+SDV+SFGV+L +I + GK+ E + + EL
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL-- 250
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 738
+R C I C Q P R S+ +V + L+
Sbjct: 251 -------------ERPRACP-PEVYAIMRGCWQREPQQRHSIKDVHARLQ 286
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 9/211 (4%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
D E + ++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + ++ ++ SL +L I + + K + I QG+
Sbjct: 62 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 118
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL S IIHRDLK +NI L E + KI DFG+A ++ S EQ+ G+I ++ P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGK 665
E K YS +SDV++FG++L ++++G+
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAY 126
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAP 181
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 231
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 232 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 38/290 (13%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ +LP + ++AVK L + S ++F+ E L LQH +
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL--FDPIRKLI----------LDWKKRVHII 569
++R G C + ++++EYM + L+ +L P KL+ L + + +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
+ G++YL + L +HRDL N L+G+ + KI DFGM+R + +
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWK 688
I ++PPE ++T+SDV+SFGV+L +I + GK+ E + + EL
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL-- 279
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 738
+R C I C Q P R S+ +V + L+
Sbjct: 280 -------------ERPRACP-PEVYAIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 38/290 (13%)
Query: 468 IRNKLGEGGYGPVY----KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ +LP + ++AVK L + S ++F+ E L LQH +
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL--FDPIRKLI----------LDWKKRVHII 569
++R G C + ++++EYM + L+ +L P KL+ L + + +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
+ G++YL + L +HRDL N L+G+ + KI DFGM+R + +
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWK 688
I ++PPE ++T+SDV+SFGV+L +I + GK+ E + + EL
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL-- 256
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 738
+R C I C Q P R S+ +V + L+
Sbjct: 257 -------------ERPRACP-PEVYAIMRGCWQREPQQRHSIKDVHARLQ 292
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 33/286 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ G +AVK L K T + F E L LQH
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSL-DCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+R+ E +I E+M SL D D K++L K + I +G+ Y
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAY 124
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVVGTIGY 634
++ R IHRDL+ +N+L+ E++ KI+DFG+AR+ +E+N E I +
Sbjct: 125 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARV-----IEDNEYTAREGAKFPIKW 176
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN-LSILEHAYELWKGGKGV 693
PE G ++ KS+V+SFG+LL +I++ ++ N + +S L Y + +
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRM---- 232
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
N P +L +I +C +E +RP+ + S+L +
Sbjct: 233 ---------ENCPDEL---YDIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 36/299 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 520 VNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
L+++ + + SEE + ++ EYM SL +L K L + V + I G+ Y
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAY 126
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG-TIGYIPP 637
++ R+ +HRDL+ +NIL+GE + K++DFG+AR+ E E Q I + P
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 181
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKGVEFV 696
E A G ++ KSDV+SFG+LL ++ + R+ +N E L +E Y +
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------- 231
Query: 697 DSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
PC C E + C ++ P +RP+ + + L++ T+ +P
Sbjct: 232 ---------PCP-PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 66
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 122
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 180 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 228
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 229 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 283
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 284 IISSIKEE 291
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+IEA+ S R +G G +G VYKG + + K+ + + F+ F+NEV + K
Sbjct: 32 EIEASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+HVN++ +G+ + + ++ ++ SL +L +++ + + I QG+
Sbjct: 90 RHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMD 146
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL + IIHRD+K +NI L E + KI DFG+A + ++ S + EQ G++ ++ P
Sbjct: 147 YLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 638 E---YATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVE 694
E +S +SDV+S+G++L ++++G+ IN I ++ G+G
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL--PYSHINNRDQI------IFMVGRGYA 255
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNIN 745
D +N P + R + + V+E P +L +L++ IN
Sbjct: 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKIN 306
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 62
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILD--- 561
EF NE + + +++R+LG + ++I E M L YL +R + +
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMANNPV 121
Query: 562 -----WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
K + + I G+ YL +HRDL N ++ E KI DFGM R
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-------------- 224
Query: 677 LSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE+ S
Sbjct: 225 -TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIIS 282
Query: 736 MLKNE 740
+K E
Sbjct: 283 SIKEE 287
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 44/301 (14%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE-EFKNEV 511
E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++ EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK-------- 563
+ + +++R+LG + ++I E M L YL R L + +
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPP 120
Query: 564 ---KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKES 620
K + + I G+ YL +HRDL N ++ E KI DFGM R +
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 621 LEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSIL 680
+ + + ++ PE GV++T SDV+SFGV+L +I ++
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA---------------TLA 222
Query: 681 EHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
E Y+ + + FV + L D+ C M LE+ +C Q NP RPS LE+ S +K
Sbjct: 223 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSIKE 281
Query: 740 E 740
E
Sbjct: 282 E 282
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 72
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILD--- 561
EF NE + + +++R+LG + ++I E M L YL +R + +
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPAMANNPV 131
Query: 562 -----WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
K + + I G+ YL +HRDL N ++ E KI DFGM R
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-------------- 234
Query: 677 LSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE+ S
Sbjct: 235 -TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIIS 292
Query: 736 MLKNE 740
+K E
Sbjct: 293 SIKEE 297
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 66
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 122
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 180 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 228
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 229 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 283
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 284 IISSIKEE 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 94
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 150
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 151 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 207
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 208 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 256
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 257 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 311
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 312 IISSIKEE 319
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 65
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 121
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 227
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 228 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 282
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 283 IISSIKEE 290
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 65
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 121
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 227
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 228 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 282
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 283 IISSIKEE 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 59
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 115
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N + E KI DFGM
Sbjct: 116 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMT 172
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 173 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 221
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M LE+ +C Q NP RPS LE
Sbjct: 222 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLE 276
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 277 IISSIKEE 284
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
VY + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 72
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 128
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 234
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 235 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 289
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 290 IISSIKEE 297
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE 505
V+ + E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRER 63
Query: 506 -EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK- 563
EF NE + + +++R+LG + ++I E M L YL R L + +
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMEN 119
Query: 564 ----------KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
K + + I G+ YL +HRDL N ++ E KI DFGM
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGI 673
R + + + + ++ PE GV++T SDV+SFGV+L +I
Sbjct: 177 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------- 225
Query: 674 NENLSILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLE 732
++ E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE
Sbjct: 226 ----TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLE 280
Query: 733 VSSMLKNE 740
+ S +K E
Sbjct: 281 IISSIKEE 288
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 22/215 (10%)
Query: 468 IRNKLGEGGYGPVYKG----VLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ +LGEG +G V+ + P + ++AVK L + ++F+ E L LQH +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYL--FDPIRKLILDWKKR-----------VHI 568
+++ G C D + ++++EYM + L+ +L P +++D + R +HI
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 569 IEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQV 628
I G++YL + +HRDL N L+G + KI DFGM+R
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 629 VGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ I ++PPE ++T+SDV+SFGV+L +I +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 44/301 (14%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEV-------IAVKKLSKTSTQGFE-EFKNEV 511
E A E+ ++ +LG+G +G VY+GV G V +A+K +++ ++ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK-------- 563
+ + +++R+LG + ++I E M L YL R L + +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPP 122
Query: 564 ---KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKES 620
K + + I G+ YL +HRDL N ++ E KI DFGM R +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 621 LEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSIL 680
+ + + ++ PE GV++T SDV+SFGV+L +I ++
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA---------------TLA 224
Query: 681 EHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
E Y+ + + FV + L D+ C M E+ +C Q NP RPS LE+ S +K
Sbjct: 225 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKE 283
Query: 740 E 740
E
Sbjct: 284 E 284
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40)
At 3.0a Resolution Using Crystal Grown In The Presence
Of Polysaccharides
pdb|1ZBK|A Chain A, Recognition Of Specific Peptide Sequences By Signalling
Protein From Sheep Mammary Gland (Sps-40): Crystal
Structure Of The Complex Of Sps-40 With A Peptide
Trp-Pro-Trp At 2.9a Resolution
pdb|1ZL1|A Chain A, Crystal Structure Of The Complex Of Signalling Protein
From Sheep (Sps-40) With A Designed Peptide Trp-His-Trp
Reveals Significance Of Asn79 And Trp191 In The Complex
Formation
pdb|2FDM|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Glycoprotein Frm Sheep (Sps-40)with Hexasaccharide
(Nag6) And Peptide Trp-Pro-Trp At 3.0a Resolution
pdb|2G41|A Chain A, Crystal Structure Of The Complex Of Sheep Signalling
Glycoprotein With Chitin Trimer At 3.0a Resolution
pdb|2G8Z|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Protein From Sheep (Sps-40) With Trimer And Designed
Peptide At 2.5a Resolution
pdb|2DPE|A Chain A, Crystal Structure Of A Secretory 40kda Glycoprotein From
Sheep At 2.0a Resolution
pdb|2DSU|A Chain A, Binding Of Chitin-Like Polysaccharide To Protective
Signalling Factor: Crystal Structure Of The Complex
Formed Between Signalling Protein From Sheep (Sps-40)
With A Tetrasaccharide At 2.2 A Resolution
pdb|2DSV|A Chain A, Interactions Of Protective Signalling Factor With
Chitin-like Polysaccharide: Crystal Structure Of The
Complex Between Signalling Protein From Sheep (sps-40)
And A Hexasaccharide At 2.5a Resolution
pdb|2DSW|A Chain A, Binding Of Chitin-Like Polysaccharides To Protective
Signalling Factor: Crystal Structure Of The Complex Of
Signalling Protein From Sheep (Sps-40) With A
Pentasaccharide At 2.8 A Resolution
Length = 361
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S++ + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTTLVKEMKAEFIR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEP--VSTNFTA 222
+A+ T Q L+L+A A Y + I R+L++I +T ++ + +
Sbjct: 143 EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
P A S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFAGNEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTD-VGAPVS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGVPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
VY + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HRDL N ++ KI DFGM R
Sbjct: 126 PPT-LQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 226
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NPN RP+ LE+ ++
Sbjct: 227 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNL 285
Query: 737 LKNE 740
LK++
Sbjct: 286 LKDD 289
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG+AR+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQG---FEEFKNEVMLT 514
I E F + N LG+G + VY+ + G +A+K + K + + +NEV +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
+L+H +++ + + DS L+ E N ++ YL + ++ + + H + I
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIIT 123
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+LYL + I+HRDL +SN+LL M KI+DFG+A E + GT Y
Sbjct: 124 GMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--HEKHYTLCGTPNY 178
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
I PE AT+ + +SDV+S G + ++ G+
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary
Gland Protein (Mgp-40) Secreted During Involution
Length = 361
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S++ + R++FI S R +GF GLD AW P D ++ L E + A
Sbjct: 85 FSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T + L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ G RF+ + D + + G A+KLVM +P +G ++TL + +G GA +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTDG-GAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
++ L++E+M + L YL ++ + + + + + +G+ YL+E S +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+GE K+SDFGM R L++ GT + + PE + YS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
+KSDV+SFGVL+ ++ S ++ YE + VE + +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKI---------------PYENRSNSEVVEDISTGFRLYKPR 227
Query: 707 CKLMRCLEIALLCVQENPNDRPSM 730
+I C +E P DRP+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAF 251
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 222 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 282 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 314
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 141/321 (43%), Gaps = 51/321 (15%)
Query: 442 GDFNRNVPNLRVY----SLADIEAATERF---------SIRNKLGEGGYGPVYKGVLPCG 488
G+ + +P LR Y + D F SI +G G +G V G L
Sbjct: 10 GNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLP 69
Query: 489 EVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMP 543
+ KT G+ E F E + + H N+IR+ G S+ M++ EYM
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129
Query: 544 NKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAM 603
N SLD +L + + + V ++ GI G+ YL S + +HRDL NIL+ +
Sbjct: 130 NGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNL 184
Query: 604 KPKISDFGMARIFAKESLEENTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVL 657
K+SDFG++R+ LE++ E T G + PE +++ SDV+S+G++
Sbjct: 185 VCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 658 LLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIA 716
L +++S G+R + + ++ Y L + P L ++
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRL-------------PPPMDCPAAL---YQLM 283
Query: 717 LLCVQENPNDRPSMLEVSSML 737
L C Q++ N+RP ++ S+L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From
Porcine (spp-40) At 2.89a Resolution
pdb|1XRV|A Chain A, Crystal Structure Of The Novel Secretory Signalling
Protein From Porcine (Spp-40) At 2.1a Resolution.
pdb|1ZBC|A Chain A, Crystal Structure Of The Porcine Signalling Protein
Liganded With The Peptide Trp-Pro-Trp (Wpw) At 2.3 A
Resolution
pdb|1ZB5|A Chain A, Recognition Of Peptide Ligands By Signalling Protein From
Porcine Mammary Gland (Spp-40): Crystal Structure Of The
Complex Of Spp-40 With A Peptide Trp-Pro-Trp At 2.45a
Resolution
Length = 361
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGPQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTTLVKEMKAEFIR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGQEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGKSFTLASSKTD-VGAPVS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + ++ G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGILAYYEICDFLQ--GATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 251 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 283
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 198 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 257
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 258 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 290
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 196 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 255
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 256 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 288
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG+ R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 197 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 256
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 257 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 289
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 29 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ EYM N SLD +L + +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--I 145
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 146 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 197
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 258 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 737 L 737
L
Sbjct: 302 L 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 254 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 286
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 251 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 283
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein
(Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a
Resolution Reveals Specific Binding Characteristics Of
Sps-40
Length = 361
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 81 DTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAW 140
+T+K +NP + T+LS+G G + +S + + R++FI S R +GF GLD AW
Sbjct: 60 NTLKNRNPKLKTLLSVG-GWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAW 118
Query: 141 TAPNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA--NSYLLNSI 198
P D ++ L E + + +A+ T Q L+L+A A Y + I
Sbjct: 119 LYPGRR-DKRHLTTLVKEMKAEFIR-EAQAGTEQ---LLLSAAVSAGKIAIDRGYDIAQI 173
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGS--ISGRFARSTDQVLKAWIERGLSADKL 256
R+L++I +T ++ G+ S RF+ + D + + G A+KL
Sbjct: 174 SRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNEDASSRFSNA-DYAVSYMLRLGAPANKL 232
Query: 257 VMCLPFYGYAWTLVKPEDNGIGAAAAGPAL-----YDSGLVTYKKIKNHIKTYGPDVQVM 311
VM +P +G ++TL + + +GA +GP + + G++ Y +I + + +G
Sbjct: 233 VMGIPTFGRSFTLASSKTD-VGAPVSGPGIPGRFTKEKGILAYYEICDFL--HGATTHRF 289
Query: 312 YNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFDD 360
+ +V Y + G W +DD E+V+ K Y K ++L G W + DD
Sbjct: 290 RDQ--QVPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 190 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 249
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 250 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 282
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 195 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 254
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 255 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 287
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL + +D K + I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL--- 133
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 254 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 286
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE-SLEENTEQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ + E I + PE T
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 251 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 283
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 189 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 248
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 249 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 281
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
SI +G G +G V G L + KT G+ E F E + + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N+IR+ G S+ M++ EYM N SLD +L + + + V ++ GI G+ YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL- 134
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG------Y 634
S + +HRDL NIL+ + K+SDFG++R+ LE++ E T G +
Sbjct: 135 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRW 187
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGV 693
PE +++ SDV+S+G++L +++S G+R + + ++ Y L
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------- 240
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
+ P L ++ L C Q++ N+RP ++ S+L
Sbjct: 241 ------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 268
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 269 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 301
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40
In The Presense Of N,n',n''-triacetyl-chitotriose At
2.6a Resolution
Length = 361
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + A
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T + L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ S RF+ + D + + G A+KLVM +P +G ++TL + +G GA +
Sbjct: 200 PLFRGNSDASSRFS-NADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTDG-GAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYAT 641
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 268
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 269 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 301
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
SI +G G +G V G L + KT G+ E F E + + H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N+IR+ G S+ M++ EYM N SLD +L + + + V ++ GI G+ YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL- 151
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG------Y 634
S + +HRDL NIL+ + K+SDFG++R+ LE++ E T G +
Sbjct: 152 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRW 204
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGV 693
PE +++ SDV+S+G++L +++S G+R + + ++ Y L
Sbjct: 205 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------- 257
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
+ P L ++ L C Q++ N+RP ++ S+L
Sbjct: 258 ------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 449 PNLRVYSLA-DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE- 506
PN V+ A +IEA+ +I +G G +G V G L + KT G+ E
Sbjct: 8 PNQAVHEFAKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK 65
Query: 507 ----FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
F E + + H N+I + G S+ M++ EYM N SLD +L + +
Sbjct: 66 QRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV-- 123
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
+ V ++ GI+ G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE
Sbjct: 124 IQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LE 175
Query: 623 ENTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINE 675
++ E T G + PE +++ SDV+S+G+++ +++S G+R +
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD 235
Query: 676 NLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
+ +E Y L S +D P L ++ L C Q+ N RP E+ +
Sbjct: 236 VIKAVEEGYRL----------PSPMD---CPAAL---YQLMLDCWQKERNSRPKFDEIVN 279
Query: 736 MLKNETTN 743
ML N
Sbjct: 280 MLDKLIRN 287
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling
Protein From Bovine (Spc-40) At 2.1 A Resolution
Length = 361
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGSER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHGGWRGTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ G RF+ + D + + G A+KLVM +P +G ++TL +GA +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSSTR-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 46/287 (16%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 236
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF------DPIRKLILDWKKRVHIIEGIT 573
L++ L + E +I E+M SL +L P+ KLI D+ + I
Sbjct: 237 DKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-DFSAQ------IA 288
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
+G+ ++++ + IHRDL+ +NIL+ ++ KI+DFG+AR+ AK I
Sbjct: 289 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIK 334
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWKGGKG 692
+ PE G ++ KSDV+SFG+LL++I++ R+ N E + LE Y + +
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR---- 390
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
N P +L I + C + P +RP+ + S+L +
Sbjct: 391 ---------PENCPEEL---YNIMMRCWKNRPEERPTFEYIQSVLDD 425
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
++ L++E+M + L YL ++ + + + + + +G+ YL+E +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 129
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+GE K+SDFGM R L++ GT + + PE + YS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 647 TKSDVFSFGVLLLQIISGKRL 667
+KSDV+SFGVL+ ++ S ++
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKI 206
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 114/202 (56%), Gaps = 20/202 (9%)
Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE + A+K L++T+ + EF +E ++ A + H +L+R+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLF---DPI-RKLILDWKKRVHIIEGITQGLLYLQE 581
LG C+ S L+ + MP+ L Y+ D I +L+L+W + I +G++YL+E
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
++HRDL N+L+ KI+DFG+AR+ + E N + I ++ E
Sbjct: 136 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 642 KGVYSTKSDVFSFGVLLLQIIS 663
++ +SDV+S+GV + ++++
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 41/314 (13%)
Query: 449 PNLRVYSLA-DIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTST-Q 502
PN V A +I+A+ I +G G +G V G L +A+K L T +
Sbjct: 15 PNQAVREFAKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK 72
Query: 503 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
+F +E + + H N+I + G + M+I EYM N SLD +L + +
Sbjct: 73 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-- 130
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
+ V ++ GI G+ YL S ++ +HRDL NIL+ + K+SDFGM+R+ LE
Sbjct: 131 IQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV-----LE 182
Query: 623 ENTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINE 675
++ E T G + PE +++ SDV+S+G+++ +++S G+R +
Sbjct: 183 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 242
Query: 676 NLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS 735
+ +E Y L + P L ++ L C Q+ +DRP ++ +
Sbjct: 243 VIKAIEEGYRL-------------PPPMDCPIALH---QLMLDCWQKERSDRPKFGQIVN 286
Query: 736 MLKNETTNINTPKK 749
ML N N+ K+
Sbjct: 287 MLDKLIRNPNSLKR 300
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF------DPIRKLILDWKKRVHIIEGIT 573
L++ L + E +I E+M SL +L P+ KLI D+ + I
Sbjct: 243 DKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-DFSAQ------IA 294
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVV 629
+G+ ++++ + IHRDL+ +NIL+ ++ KI+DFG+AR+ +E+N E
Sbjct: 295 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV-----IEDNEYTAREGAK 346
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWK 688
I + PE G ++ KSDV+SFG+LL++I++ R+ N E + LE Y + +
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 406
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
N P +L I + C + P +RP+ + S+L +
Sbjct: 407 -------------PENCPEEL---YNIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
++ L++E+M + L YL ++ + + + + + +G+ YL+E +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 126
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+GE K+SDFGM R + +T GT + + PE + YS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 182
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
+KSDV+SFGVL+ ++ S ++ YE + VE + +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKI---------------PYENRSNSEVVEDISTGFRLYKPR 227
Query: 707 CKLMRCLEIALLCVQENPNDRPSM 730
+I C +E P DRP+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAF 251
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40)
Secreted During Involution
Length = 361
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNFGSER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVPAGKIAIDRGYDIAQISRHLDFISLLTYDFHGGWRGTVGHHS 199
Query: 225 AALYGSISG--RFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ G RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGNSDGSSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSKTD-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G + Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGQFTKEKGTLAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 127/281 (45%), Gaps = 31/281 (11%)
Query: 471 KLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 526 LGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYS 583
G C + R LI E++P SL YL K +D K + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT-EQVVGTIGYIPPEYATK 642
IHRDL NIL+ + KI DFG+ ++ ++ E I + PE T+
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 643 GVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKGV 693
+S SDV+SFGV+L ++ + + + M+ + I+ H EL K +
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
D D+ I C N N RPS +++
Sbjct: 255 PRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
++ L++E+M + L YL ++ + + + + + +G+ YL+E +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 124
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+GE K+SDFGM R + +T GT + + PE + YS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 180
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
+KSDV+SFGVL+ ++ S ++ YE + VE + +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKI---------------PYENRSNSEVVEDISTGFRLYKPR 225
Query: 707 CKLMRCLEIALLCVQENPNDRPSM 730
+I C +E P DRP+
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAF 249
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein
(Spb-40) Secreted During Involution
pdb|2O9O|A Chain A, Crystal Structure Of The Buffalo Secretory Signalling
Glycoprotein At 2.8 A Resolution
pdb|2QF8|A Chain A, Crystal Structure Of The Complex Of Buffalo Secretory
Glycoprotein With Tetrasaccharide At 2.8a Resolution
Length = 361
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP++ T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPNLKTLLSVG-GWNYGSQR 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + +
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLWPGWR-DKRHLTTLVKEMKAEFVR- 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T Q L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTEQ---LLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGNEDASSRFSNA-DYAVSYMLRLGAPANKLVMGIPTFGRSYTLASSKTD-VGAPIS 257
Query: 283 GPALYD-----SGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKWKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV---LPCGEV---IAVKKLSKT-STQGFE 505
VY + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HR+L N ++ KI DFGM R
Sbjct: 127 PPT-LQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 227
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NPN RP+ LE+ ++
Sbjct: 228 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNL 286
Query: 737 LKNE 740
LK++
Sbjct: 287 LKDD 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV---LPCGEV---IAVKKLSKT-STQGFE 505
VY + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HR+L N ++ KI DFGM R
Sbjct: 126 PP-TLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 226
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NPN RP+ LE+ ++
Sbjct: 227 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNL 285
Query: 737 LKNE 740
LK++
Sbjct: 286 LKDD 289
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 114/202 (56%), Gaps = 20/202 (9%)
Query: 472 LGEGGYGPVYKGV-LPCGEVI----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE + A+K L++T+ + EF +E ++ A + H +L+R+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLF---DPI-RKLILDWKKRVHIIEGITQGLLYLQE 581
LG C+ S L+ + MP+ L Y+ D I +L+L+W + I +G++YL+E
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
++HRDL N+L+ KI+DFG+AR+ + E N + I ++ E
Sbjct: 159 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 642 KGVYSTKSDVFSFGVLLLQIIS 663
++ +SDV+S+GV + ++++
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40)
Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a
Resolution
pdb|1ZBW|A Chain A, Crystal Structure Of The Complex Formed Between Signalling
Protein From Goat Mammary Gland (Spg-40) And A
Tripeptide Trp-Pro-Trp At 2.8a Resolution
pdb|1ZU8|A Chain A, Crystal Structure Of The Goat Signalling Protein With A
Bound Trisaccharide Reveals That Trp78 Reduces The
Carbohydrate Binding Site To Half
pdb|2AOS|A Chain A, Protein-protein Interactions Of Protective Signalling
Factor: Crystal Structure Of Ternary Complex Involving
Signalling Protein From Goat (spg-40), Tetrasaccharide
And A Tripeptide Trp-pro-trp At 2.9 A Resolution
pdb|2B31|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 3.1 A
Resolution Reveals Large Scale Conformational Changes In
The Residues Of Tim Barrel
pdb|2DSZ|A Chain A, Three Dimensional Structure Of A Goat Signalling Protein
Secreted During Involution
pdb|2DT0|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With The Trimer Of N-acetylglucosamine At 2.45a
Resolution
pdb|2DT1|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With Tetrasaccharide At 2.09 A Resolution
pdb|2DT2|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 2.9a
Resolution
pdb|2DT3|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein And The Hexasaccharide At 2.28 A
Resolution
pdb|2O92|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Tetrasaccharide At 3.0a Resolution
pdb|2OLH|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Cellobiose At 2.78 A Resolution
Length = 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 24/323 (7%)
Query: 47 LFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNYSI 106
L TH+I S A+I++ + ++ + +T+K +NP + T+LS+G G +
Sbjct: 29 LCTHVIYSFANISNNEID---TWEWNDVTLYDTLNTLKNRNPKLKTLLSVG-GWNFGPER 84
Query: 107 YSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNTSTDMFNIGLLFDEWRIAATKL 166
+S + + R++FI S R +GF GLD AW P D ++ L E + A
Sbjct: 85 FSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-DKRHLTALVKEMK-AEFAR 142
Query: 167 DAKNSTRQQSLLILTARFRYSPPA--NSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPP 224
+A+ T + L+L+A A Y + I R+L++I +T ++
Sbjct: 143 EAQAGTER---LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHS 199
Query: 225 AALYGS--ISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
G+ S RF+ + D + + G A+KLVM +P +G ++TL + + +GA +
Sbjct: 200 PLFRGNSDASSRFS-NADYAVSYMLRLGAPANKLVMGIPTFGRSFTLASSKTD-VGAPIS 257
Query: 283 GPAL-----YDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVR 337
GP + + G++ Y +I + + +G + +V Y + G W +DD E+V+
Sbjct: 258 GPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQ--QVPYATKGNQWVAYDDQESVK 313
Query: 338 AKIAYAKEKRLLGYYAWQVSFDD 360
K Y K ++L G W + DD
Sbjct: 314 NKARYLKNRQLAGAMVWALDLDD 336
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E E + KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 69
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF------DPIRKLILDWKKRVHIIEGIT 573
L++ L + E +I E+M SL +L P+ KLI D+ + I
Sbjct: 70 DKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI-DFSAQ------IA 121
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT----EQVV 629
+G+ ++++ + IHRDL+ +NIL+ ++ KI+DFG+AR+ +E+N E
Sbjct: 122 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV-----IEDNEYTAREGAK 173
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN-ENLSILEHAYELWK 688
I + PE G ++ KSDV+SFG+LL++I++ R+ N E + LE Y + +
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 233
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
N P +L I + C + P +RP+ + S+L +
Sbjct: 234 -------------PENCPEEL---YNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HRDL N ++ KI DFGM R
Sbjct: 126 PPT-LQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 226
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NP RP+ LE+ ++
Sbjct: 227 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 737 LKNE 740
LK++
Sbjct: 286 LKDD 289
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 28/263 (10%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + K + ++F E + KL H L+++ G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
++ L++E+M + L YL ++ + + + + + +G+ YL+E +IH
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 146
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+GE K+SDFGM R + +T GT + + PE + YS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 202
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
+KSDV+SFGVL+ ++ S ++ YE + VE + +
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKI---------------PYENRSNSEVVEDISTGFRLYKPR 247
Query: 707 CKLMRCLEIALLCVQENPNDRPS 729
+I C +E P DRP+
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPA 270
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HRDL N ++ KI DFGM R
Sbjct: 123 PPT-LQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 179 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 223
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NP RP+ LE+ ++
Sbjct: 224 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNL 282
Query: 737 LKNE 740
LK++
Sbjct: 283 LKDD 286
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 31/282 (10%)
Query: 470 NKLGEGGYGPV----YKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+LG+G +G V Y + GEV+AVKKL ++ + +F+ E+ + LQH N+++
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 525 VLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G C + R LI EY+P SL YL K +D K + I +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE-SLEENTEQVVGTIGYIPPEYAT 641
IHR+L NIL+ + KI DFG+ ++ ++ + E I + PE T
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 642 KGVYSTKSDVFSFGVLLLQIIS---------GKRLSMLCGINENLSILEHAYELWKGGKG 692
+ +S SDV+SFGV+L ++ + + + M+ + I+ H EL K
Sbjct: 192 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 251
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVS 734
+ D D+ I C N N RPS +++
Sbjct: 252 LPRPDGCPDE---------IYMIMTECWNNNVNQRPSFRDLA 284
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ E M N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 142/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV---LPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HRDL N ++ KI DFGM R
Sbjct: 126 PP-TLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 182 ETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 226
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NP RP+ LE+ ++
Sbjct: 227 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 737 LKNE 740
LK++
Sbjct: 286 LKDD 289
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 39/301 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
P V+ A AT SI +G G +G V G L + KT G+ E
Sbjct: 31 PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N+IR+ G S+ M++ E M N SLD +L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--I 147
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL S + +HRDL NIL+ + K+SDFG++R+ LE+
Sbjct: 148 QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LED 199
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E T G + PE +++ SDV+S+G++L +++S G+R +
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ ++ Y L + P L ++ L C Q++ N+RP ++ S+
Sbjct: 260 IKAVDEGYRL-------------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 737 L 737
L
Sbjct: 304 L 304
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
++G G +G V+ G + +A+K + + E+F E + KL H L+++ G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
++ L+ E+M + L YL ++ + + + + + +G+ YL+E +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 127
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+GE K+SDFGM R + +T GT + + PE + YS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYS 183
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSP 706
+KSDV+SFGVL+ ++ S ++ YE + VE + +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKI---------------PYENRSNSEVVEDISTGFRLYKPR 228
Query: 707 CKLMRCLEIALLCVQENPNDRPSM 730
+I C +E P DRP+
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAF 252
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 38/296 (12%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPC-GE---VIAVKKLSKTST-QGFEEFKNEVMLTAKLQHV 520
I +G G +G V G L G+ +A+K L T + +F +E + + H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N+I + G + M+I EYM N SLD +L + + + V ++ GI G+ YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL- 132
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG------Y 634
S ++ +HRDL NIL+ + K+SDFGM+R+ LE++ E T G +
Sbjct: 133 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAYTTRGGKIPIRW 185
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGV 693
PE +++ SDV+S+G+++ +++S G+R + + +E Y L
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------- 238
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNINTPKK 749
+ P L ++ L C Q+ +DRP ++ +ML N N+ K+
Sbjct: 239 ------PPPMDCPIALH---QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 285
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFE 505
V+ + E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 506 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRK 557
EF NE + +++R+LG + +++ E M + L YL +P R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFA 617
++ + + I G+ YL +HRDL N ++ KI DFGM R
Sbjct: 126 PPT-LQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENL 677
+ + + + ++ PE GV++T SD++SFGV+L +I
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------------- 226
Query: 678 SILEHAYELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
S+ E Y+ + ++FV D D+ C R ++ +C Q NP RP+ LE+ ++
Sbjct: 227 SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 737 LKNE 740
LK++
Sbjct: 286 LKDD 289
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 38/296 (12%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSKTST-QGFEEFKNEVMLTAKLQHV 520
I +G G +G V G L +A+K L T + +F +E + + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N+I + G + M+I EYM N SLD +L + + + V ++ GI G+ YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL- 126
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG------Y 634
S ++ +HRDL NIL+ + K+SDFGM+R+ LE++ E T G +
Sbjct: 127 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAYTTRGGKIPIRW 179
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGV 693
PE +++ SDV+S+G+++ +++S G+R + + +E Y L
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------- 232
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNINTPKK 749
+ P L ++ L C Q+ +DRP ++ +ML N N+ K+
Sbjct: 233 ------PPPMDCPIALH---QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 279
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 38/284 (13%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHV 520
SI +G G +G V G L + KT G+ E F E + + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N+IR+ G S+ M++ E M N SLD +L + + + V ++ GI G+ YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL- 134
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG------Y 634
S + +HRDL NIL+ + K+SDFG++R+ LE++ E T G +
Sbjct: 135 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRW 187
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGV 693
PE +++ SDV+S+G++L +++S G+R + + ++ Y L
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------- 240
Query: 694 EFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
+ P L ++ L C Q++ N+RP ++ S+L
Sbjct: 241 ------PPPMDCPAAL---YQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 36/297 (12%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKG---VLPCGEV---IAVKKLSKT-STQGFEEFKNEVM 512
E + E+ ++ +LG+G +G VY+G + GE +AVK ++++ S + EF NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF--------DPIRKLILDWKK 564
+ +++R+LG + +++ E M + L YL +P R ++
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-LQE 130
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
+ + I G+ YL +HRDL N ++ KI DFGM R +
Sbjct: 131 MIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 187
Query: 625 TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAY 684
+ + + ++ PE GV++T SD++SFGV+L +I S+ E Y
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPY 232
Query: 685 ELWKGGKGVEFV-DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 740
+ + ++FV D D+ C R ++ +C Q NP RP+ LE+ ++LK++
Sbjct: 233 QGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 34/241 (14%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVL--PC-GE---VIAVKKLSKTSTQGF-EEFK 508
L +I + RF +LGE +G VYKG L P GE +A+K L + EEF+
Sbjct: 20 LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF-------------DPI 555
+E ML A+LQH N++ +LG + +I+ Y + L +L D
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 556 RKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARI 615
K L+ VH++ I G+ YL + ++H+DL N+L+ + + KISD G+ R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR- 193
Query: 616 FAKESLEENTEQVVGT----IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLC 671
E + +++G I ++ PE G +S SD++S+GV+L ++ S L C
Sbjct: 194 ---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-YGLQPYC 249
Query: 672 G 672
G
Sbjct: 250 G 250
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 26/237 (10%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVL--PC-GE---VIAVKKLSKTSTQGF-EEFK 508
L +I + RF +LGE +G VYKG L P GE +A+K L + EEF+
Sbjct: 3 LKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF-------------DPI 555
+E ML A+LQH N++ +LG + +I+ Y + L +L D
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 556 RKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARI 615
K L+ VH++ I G+ YL + ++H+DL N+L+ + + KISD G+ R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 616 FAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCG 672
+ + I ++ PE G +S SD++S+GV+L ++ S L CG
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-YGLQPYCG 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 136/304 (44%), Gaps = 31/304 (10%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQ-G 503
PN V A E I +G G +G V +G L +A+K L T+
Sbjct: 2 PNEAVREFAK-EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
EF +E + + +H N+IR+ G +S M++ E+M N +LD +L +
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVI 118
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL E ++ +HRDL NIL+ + K+SDFG++R + S +
Sbjct: 119 QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 624 NTEQVVG---TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSI 679
+G I + PE +++ SD +S+G+++ +++S G+R + ++
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINA 235
Query: 680 LEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 739
+E Y L + P L ++ L C Q++ N RP +V S L
Sbjct: 236 IEQDYRL-------------PPPPDCPTSLH---QLMLDCWQKDRNARPRFPQVVSALDK 279
Query: 740 ETTN 743
N
Sbjct: 280 MIRN 283
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 34/287 (11%)
Query: 468 IRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNL 522
I +G G +G V +G L +A+K L T+ EF +E + + +H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLF--DPIRKLILDWKKRVHIIEGITQGLLYLQ 580
IR+ G +S M++ E+M N +LD +L D +I + V ++ GI G+ YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI----QLVGMLRGIASGMRYLA 133
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG---TIGYIPP 637
E ++ +HRDL NIL+ + K+SDFG++R + S + +G I + P
Sbjct: 134 E---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGVEFV 696
E +++ SD +S+G+++ +++S G+R + ++ +E Y L
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL---------- 240
Query: 697 DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTN 743
+ P L ++ L C Q++ N RP +V S L N
Sbjct: 241 ---PPPPDCPTSLH---QLMLDCWQKDRNARPRFPQVVSALDKMIRN 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLI 523
+I+ K+G G +G V++ G +AVK L + + EF EV + +L+H N++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYS 583
+G ++ EY+ SL L + LD ++R+ + + +G+ YL +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKG 643
I+HRDLK N+L+ + K+ DFG++R+ A L ++ GT ++ PE
Sbjct: 158 P-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEVLRDE 214
Query: 644 VYSTKSDVFSFGVLLLQIIS 663
+ KSDV+SFGV+L ++ +
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 64/304 (21%)
Query: 472 LGEGGYGPVYK----GVLPCGE--VIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIR 524
+GEG +G V++ G+LP ++AVK L + ++ + +F+ E L A+ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYL--FDP------------IRKLI-------LDWK 563
+LG C + L++EYM L+ +L P R + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE 622
+++ I + G+ YL E +HRDL N L+GE M KI+DFG++R I++ + +
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEH 682
+ + I ++PPE Y+T+SDV+++GV+L +I S L+
Sbjct: 232 ADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG--------------LQP 276
Query: 683 AYELWKGGKGVEFVDSFLDDRNSPCKLMRCLE--------IALLCVQENPNDRPSMLEVS 734
Y G E V ++ D N ++ C E + LC + P DRPS +
Sbjct: 277 YY-----GMAHEEVIYYVRDGN----ILACPENCPLELYNLMRLCWSKLPADRPSFCSIH 327
Query: 735 SMLK 738
+L+
Sbjct: 328 RILQ 331
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 29/223 (13%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS----TQGFEEFKNEVMLT 514
+E ++ +G GG+G VY+ G+ +AVK +Q E + E L
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMP----NKSLDCYLFDPIRKLILDWKKRVHIIE 570
A L+H N+I + G C+ L+ E+ N+ L P ++++W +
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DILVNWAVQ----- 113
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP--------KISDFGMARIFAKESLE 622
I +G+ YL + + + IIHRDLK SNIL+ + ++ KI+DFG+AR + + +
Sbjct: 114 -IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-- 170
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
G ++ PE ++S SDV+S+GVLL ++++G+
Sbjct: 171 --KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 147
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S ++ + GT+ Y+P
Sbjct: 148 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDD---LCGTLDYLP 200
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 122
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + + GT+ Y+P
Sbjct: 123 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRDTLCGTLDYLP 175
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 23/208 (11%)
Query: 472 LGEGGYGPVYKGVLPCG----EV-IAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIRV 525
+G G +G VYKG+L EV +A+K L T+ +F E + + H N+IR+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
G + M+I EYM N +LD +L + + + + V ++ GI G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL---ANM 166
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG------YIPPEY 639
+HRDL NIL+ + K+SDFG++R+ LE++ E T G + PE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRV-----LEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS-GKR 666
+ +++ SDV+SFG+++ ++++ G+R
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVM 512
A + A E F I LG+G +G VY + ++A+K L K + G E + + EV
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEG 571
+ + L+H N++R+ G+ DS LI EY P ++ + ++KL D ++ I
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ L Y +IHRD+K N+LLG A + KI+DFG + + A S + GT
Sbjct: 117 LANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRAALCGT 169
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 42/275 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---EVMLTAKLQHVN 521
FS ++G G +G VY + EV+A+KK+S + Q E++++ EV KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
I+ G + L+ EY + D + K L + + G QGL YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY-- 639
++ +IHRD+K NILL E K+ DFG A I A VGT ++ PE
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVIL 223
Query: 640 -ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYE----LWKGGKGVE 694
+G Y K DV+S G+ +++ +R L +N +S L H + + G E
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNA-MSALYHIAQNESPALQSGHWSE 280
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
+ +F+D C+Q+ P DRP+
Sbjct: 281 YFRNFVDS----------------CLQKIPQDRPT 299
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 16/215 (7%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEV 511
L + A E F I LG+G +G VY + ++A+K L K + G E + + EV
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIE 570
+ + L+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYIT 118
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+ L Y +IHRD+K N+LLG A + KI+DFG + + A S ++ + G
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDD---LCG 171
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 42/275 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKN---EVMLTAKLQHVN 521
FS ++G G +G VY + EV+A+KK+S + Q E++++ EV KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
I+ G + L+ EY + D + K L + + G QGL YL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY-- 639
++ +IHRD+K NILL E K+ DFG A I A VGT ++ PE
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVIL 184
Query: 640 -ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYE----LWKGGKGVE 694
+G Y K DV+S G+ +++ +R L +N +S L H + + G E
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNA-MSALYHIAQNESPALQSGHWSE 241
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
+ +F+D C+Q+ P DRP+
Sbjct: 242 YFRNFVDS----------------CLQKIPQDRPT 260
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P + + ++KL D ++ I + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 127 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 179
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P + + ++KL D ++ I + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANAL 126
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 127 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLXGTLDYLP 179
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHVNLI 523
+I+ K+G G +G V++ G +AVK L + + EF EV + +L+H N++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYS 583
+G ++ EY+ SL L + LD ++R+ + + +G+ YL +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKG 643
I+HR+LK N+L+ + K+ DFG++R+ A L +++ GT ++ PE
Sbjct: 158 P-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDE 214
Query: 644 VYSTKSDVFSFGVLLLQIIS 663
+ KSDV+SFGV+L ++ +
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S ++ GT+ Y+P
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTELCGTLDYLP 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 122
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + + GT+ Y+P
Sbjct: 123 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLP 175
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + + GT+ Y+P
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLP 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 126
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + + GT+ Y+P
Sbjct: 127 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLP 179
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + + GT+ Y+P
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTD---LCGTLDYLP 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 123
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 124 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLCGTLDYLP 176
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 125 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRAALCGTLDYLP 177
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 125 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 177
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 24/241 (9%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPC-GE---VIAVKKLSKTSTQ-GFEEFKNEVM 512
+IEA+ R I +G G G V G L G+ +A+K L T+ +F +E
Sbjct: 45 EIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
+ + H N+IR+ G M++ EYM N SLD +L + + + V ++ G+
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGV 160
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
G+ YL S L +HRDL N+L+ + K+SDFG++R+ LE++ + T
Sbjct: 161 GAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-----LEDDPDAAXTTT 212
Query: 633 G------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYE 685
G + PE +S+ SDV+SFGV++ ++++ G+R + +S +E Y
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR 272
Query: 686 L 686
L
Sbjct: 273 L 273
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 138
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 139 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 191
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 24/241 (9%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPC-GE---VIAVKKLSKTSTQ-GFEEFKNEVM 512
+IEA+ R I +G G G V G L G+ +A+K L T+ +F +E
Sbjct: 45 EIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
+ + H N+IR+ G M++ EYM N SLD +L + + + V ++ G+
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGV 160
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
G+ YL S L +HRDL N+L+ + K+SDFG++R+ LE++ + T
Sbjct: 161 GAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-----LEDDPDAAYTTT 212
Query: 633 G------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYE 685
G + PE +S+ SDV+SFGV++ ++++ G+R + +S +E Y
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR 272
Query: 686 L 686
L
Sbjct: 273 L 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 147
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 148 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 200
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 126
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 127 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 179
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 55/327 (16%)
Query: 446 RNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKKLSK-TST 501
+N P+ +Y + D ++ +GEG +G V K + + A+K++ + S
Sbjct: 1 KNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 56
Query: 502 QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------FD 553
+F E+ + KL H N+I +LG C L EY P+ +L +L D
Sbjct: 57 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 116
Query: 554 PIRKL------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKI 607
P + L ++ +H + +G+ YL S+ IHRDL NIL+GE KI
Sbjct: 117 PAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKI 173
Query: 608 SDFGMARIFAKESLEENTEQVVG--TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
+DFG++R E ++ +G + ++ E VY+T SDV+S+GVLL +I+S
Sbjct: 174 ADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 228
Query: 666 RLSMLCGIN--ENLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQEN 723
+ CG+ E L Y L K + D D LMR C +E
Sbjct: 229 G-TPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYD-------LMR------QCWREK 271
Query: 724 PNDRPS----MLEVSSMLKNETTNINT 746
P +RPS ++ ++ ML+ T +NT
Sbjct: 272 PYERPSFAQILVSLNRMLEERKTYVNT 298
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 55/327 (16%)
Query: 446 RNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKKLSK-TST 501
+N P+ +Y + D ++ +GEG +G V K + + A+K++ + S
Sbjct: 11 KNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 66
Query: 502 QGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------FD 553
+F E+ + KL H N+I +LG C L EY P+ +L +L D
Sbjct: 67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 126
Query: 554 PIRKL------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKI 607
P + L ++ +H + +G+ YL S+ IHRDL NIL+GE KI
Sbjct: 127 PAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKI 183
Query: 608 SDFGMARIFAKESLEENTEQVVG--TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
+DFG++R E ++ +G + ++ E VY+T SDV+S+GVLL +I+S
Sbjct: 184 ADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 238
Query: 666 RLSMLCGIN--ENLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQEN 723
+ CG+ E L Y L K + D D LMR C +E
Sbjct: 239 G-TPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYD-------LMR------QCWREK 281
Query: 724 PNDRPS----MLEVSSMLKNETTNINT 746
P +RPS ++ ++ ML+ T +NT
Sbjct: 282 PYERPSFAQILVSLNRMLEERKTYVNT 308
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 16/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVM 512
A + A E F I LG+G +G VY + ++A+K L K + G E + + EV
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEG 571
+ + L+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ L Y +IHRD+K N+LLG A + KI+DFG + + A S + GT
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRAALCGT 169
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLCGTLDYLP 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 125 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRXXLCGTLDYLP 177
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 121
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 122 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTXLCGTLDYLP 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 120
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 121 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 173
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 125
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 126 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 178
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 125 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 177
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 126
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 127 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 179
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE + K D++S GVL + + GK
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 118
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG + + A S + GT+ Y+P
Sbjct: 119 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS---RRTTLCGTLDYLP 171
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
LG+G +G K GEV+ +K+L + + F EV + L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 531 DSEERMLIYEYMPNKSLDCYLFDPIRKLI------LDWKKRVHIIEGITQGLLYLQEYSR 584
+ I EY+ +L R +I W +RV + I G+ YL
Sbjct: 78 KDKRLNFITEYIKGGTL--------RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS--- 126
Query: 585 LTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE--------SLEENTEQ----VVGTI 632
+ IIHRDL N L+ E ++DFG+AR+ E SL++ + VVG
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKG 692
++ PE Y K DVFSFG++L +II +N + L + +G
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIG--------RVNADPDYLPRTMDFGLNVRG 238
Query: 693 VEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPAF 752
FLD P I + C +P RPS +++ L ET ++
Sbjct: 239 ------FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL--ETLRMHLAGHLPL 290
Query: 753 SKQVDEI 759
Q++++
Sbjct: 291 GPQLEQL 297
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 149/305 (48%), Gaps = 63/305 (20%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
P R+ +LAD E E+ ++G+GG+G V+KG L + V+A+K L ++G
Sbjct: 9 PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLIL 560
F+EF+ EV + + L H N++++ G + + RM++ E++P L L D + +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLD--KAHPI 119
Query: 561 DWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL-----GEAMKPKISDFGMARI 615
W ++ ++ I G+ Y+Q + I+HRDL+ NI L + K++DFG++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-- 176
Query: 616 FAKESLEENTEQVVGTIG---YIPPEY--ATKGVYSTKSDVFSFGVLLLQIISGKRLSML 670
+++ V G +G ++ PE A + Y+ K+D +SF ++L I++G
Sbjct: 177 ------QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG------ 224
Query: 671 CGINENLSILEHAYELWKGGKGVEFVDSFLDD-------RNSPCKLMRCLEIALLCVQEN 723
E ++ + GK ++F++ ++ + P +L +E LC +
Sbjct: 225 ----------EGPFDEYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNVIE---LCWSGD 270
Query: 724 PNDRP 728
P RP
Sbjct: 271 PKKRP 275
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 122
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI+DFG ++ + + GT+ Y+P
Sbjct: 123 SYCHSKR---VIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLP 175
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 150/334 (44%), Gaps = 58/334 (17%)
Query: 442 GDFNRNV---PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV---IAVKK 495
G NR V P+ +Y + D ++ +GEG +G V K + + A+K+
Sbjct: 1 GALNRKVKNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKR 56
Query: 496 LSK-TSTQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-- 551
+ + S +F E+ + KL H N+I +LG C L EY P+ +L +L
Sbjct: 57 MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 116
Query: 552 -----FDPIRKL------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG 600
DP + L ++ +H + +G+ YL S+ IHR+L NIL+G
Sbjct: 117 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVG 173
Query: 601 EAMKPKISDFGMARIFAKESLEENTEQVVG--TIGYIPPEYATKGVYSTKSDVFSFGVLL 658
E KI+DFG++R E ++ +G + ++ E VY+T SDV+S+GVLL
Sbjct: 174 ENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 659 LQIISGKRLSMLCGIN--ENLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIA 716
+I+S + CG+ E L Y L K + D D LMR
Sbjct: 229 WEIVSLGG-TPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYD-------LMR----- 272
Query: 717 LLCVQENPNDRPS----MLEVSSMLKNETTNINT 746
C +E P +RPS ++ ++ ML+ T +NT
Sbjct: 273 -QCWREKPYERPSFAQILVSLNRMLEERKTYVNT 305
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 123
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI++FG + + A S + GT+ Y+P
Sbjct: 124 SYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSS---RRTTLCGTLDYLP 176
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 35/314 (11%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
PN V A E I +G G +G V G L + KT G+ E
Sbjct: 19 PNEAVREFAK-EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ 77
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F +E + + H N+I + G S M+I E+M N SLD +L + +
Sbjct: 78 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--I 135
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL + + +HRDL NIL+ + K+SDFG++R ++ +
Sbjct: 136 QLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 624 NTEQVVGTIGYIP-----PEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENL 677
+G G IP PE +++ SDV+S+G+++ +++S G+R + +
Sbjct: 193 TYTSALG--GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
Query: 678 SILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
+ +E Y L + P L ++ L C Q++ N RP ++ + L
Sbjct: 251 NAIEQDYRL-------------PPPMDCPSALH---QLMLDCWQKDRNHRPKFGQIVNTL 294
Query: 738 KNETTNINTPKKPA 751
N N+ K A
Sbjct: 295 DKMIRNPNSLKAMA 308
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 63/305 (20%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
P R+ +LAD E E+ ++G+GG+G V+KG L + V+A+K L ++G
Sbjct: 9 PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLIL 560
F+EF+ EV + + L H N++++ G + + RM++ E++P L L D + +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLD--KAHPI 119
Query: 561 DWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL-----GEAMKPKISDFGMARI 615
W ++ ++ I G+ Y+Q + I+HRDL+ NI L + K++DFG +
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-- 176
Query: 616 FAKESLEENTEQVVGTIG---YIPPEY--ATKGVYSTKSDVFSFGVLLLQIISGKRLSML 670
+++ V G +G ++ PE A + Y+ K+D +SF ++L I++G
Sbjct: 177 ------QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG------ 224
Query: 671 CGINENLSILEHAYELWKGGKGVEFVDSFLDD-------RNSPCKLMRCLEIALLCVQEN 723
E ++ + GK ++F++ ++ + P +L +E LC +
Sbjct: 225 ----------EGPFDEYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNVIE---LCWSGD 270
Query: 724 PNDRP 728
P RP
Sbjct: 271 PKKRP 275
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 517
A E F I LG+G +G VY + ++A+K L K + G E + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL-ILDWKKRVHIIEGITQGL 576
+H N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANAL 124
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
Y +IHRD+K N+LLG A + KI++FG + + A S + GT+ Y+P
Sbjct: 125 SYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS-VHAPSS---RRTTLCGTLDYLP 177
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE ++ K D++S GVL + + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 16/206 (7%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKLQH 519
E F I LG+G +G VY + ++A+K L KT + G E + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLY 578
N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSY 127
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
+IHRD+K N+LLG + KI+DFG + + A S + + GT+ Y+PPE
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSNGELKIADFGWS-VHAPSS---RRDTLCGTLDYLPPE 180
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++ K D++S GVL + + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 29/222 (13%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL-----SKTSTQGFEEFKN 509
LA I TE ++ LG G +G V+KGV +P GE I + K+ Q F+ +
Sbjct: 24 LARIFKETELRKLK-VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRK--------LILD 561
++ L H +++R+LG C S + L+ +Y+P SL D +R+ L+L+
Sbjct: 83 HMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLN 137
Query: 562 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL 621
W + I +G+ YL+E+ ++HR+L N+LL + +++DFG+A + +
Sbjct: 138 WGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 188
Query: 622 EENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ + I ++ E G Y+ +SDV+S+GV + ++++
Sbjct: 189 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 29/222 (13%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKL-----SKTSTQGFEEFKN 509
LA I TE ++ LG G +G V+KGV +P GE I + K+ Q F+ +
Sbjct: 6 LARIFKETELRKLKV-LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRK--------LILD 561
++ L H +++R+LG C S + L+ +Y+P SL D +R+ L+L+
Sbjct: 65 HMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLN 119
Query: 562 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL 621
W + I +G+ YL+E+ ++HR+L N+LL + +++DFG+A + +
Sbjct: 120 WGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 622 EENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ + I ++ E G Y+ +SDV+S+GV + ++++
Sbjct: 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 63/305 (20%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQG---- 503
P R+ +LAD E E+ ++G+GG+G V+KG L + V+A+K L ++G
Sbjct: 9 PKSRLPTLADNEIEYEK-----QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 504 ---FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLIL 560
F+EF+ EV + + L H N++++ G + + RM++ E++P L L D + +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLD--KAHPI 119
Query: 561 DWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL-----GEAMKPKISDFGMARI 615
W ++ ++ I G+ Y+Q + I+HRDL+ NI L + K++DF ++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-- 176
Query: 616 FAKESLEENTEQVVGTIG---YIPPEY--ATKGVYSTKSDVFSFGVLLLQIISGKRLSML 670
+++ V G +G ++ PE A + Y+ K+D +SF ++L I++G
Sbjct: 177 ------QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG------ 224
Query: 671 CGINENLSILEHAYELWKGGKGVEFVDSFLDD-------RNSPCKLMRCLEIALLCVQEN 723
E ++ + GK ++F++ ++ + P +L +E LC +
Sbjct: 225 ----------EGPFDEYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNVIE---LCWSGD 270
Query: 724 PNDRP 728
P RP
Sbjct: 271 PKKRP 275
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 87 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 135
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 136 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 85 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 134 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 84 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 132
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 133 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 86 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 134
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 135 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 89 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 137
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 138 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 83 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 131
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 132 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 86 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 134
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 135 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 80 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAEGMN 128
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 129 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 77 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 125
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 126 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 86 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 134
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 135 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 93 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 141
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 142 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 83 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 131
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 132 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 85 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 134 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
++ + ++ N++ L + +E ++ EY+ SL D + + +D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
Q L +L +IHRD+K NILLG K++DFG E + +T +VGT
Sbjct: 125 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
++ PE T+ Y K D++S G++ +++I G+
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 86 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 134
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 135 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 108 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 156
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 157 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 39/310 (12%)
Query: 449 PNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-- 506
PN V+ A E I +G G +G V G L V KT G+ E
Sbjct: 29 PNRAVHQFAK-ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ 87
Query: 507 ---FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
F E + + H N++ + G + M++ E+M N +LD +L + +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--I 145
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ V ++ GI G+ YL + + +HRDL NIL+ + K+SDFG++R+ +E+
Sbjct: 146 QLVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRV-----IED 197
Query: 624 NTEQVVGTIG------YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINEN 676
+ E V T G + PE +++ SDV+S+G+++ +++S G+R +
Sbjct: 198 DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 257
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ +E Y L + P L ++ L C Q+ +RP ++ +
Sbjct: 258 IKAIEEGYRL-------------PAPMDCPAGLH---QLMLDCWQKERAERPKFEQIVGI 301
Query: 737 LKNETTNINT 746
L N N+
Sbjct: 302 LDKMIRNPNS 311
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 90 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 138
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 139 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 141/328 (42%), Gaps = 50/328 (15%)
Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKK 495
G + +V ++ E + + LGEG +G V K +AVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 496 LSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDP 554
L + S + +E + ++ H ++I++ G C +LI EY SL +L +
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 555 IRKL--------------ILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 592
RK+ LD + G I+QG+ YL E ++++HRDL
Sbjct: 121 -RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDL 176
Query: 593 KVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVF 652
NIL+ E K KISDFG++R +E Q + ++ E +Y+T+SDV+
Sbjct: 177 AARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 653 SFGVLLLQIISGKRLSMLCGINENLSI-LEHAYELWKGGKGVEFVDSFLDDRNSPCKLMR 711
SFGVLL +I++ G N I E + L K G +E D N ++ R
Sbjct: 237 SFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPD------NCSEEMYR 283
Query: 712 CLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ L C ++ P+ RP ++S L+
Sbjct: 284 LM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQ--GFE-EFKNEVMLTAKLQH 519
E F I LG+G +G VY + ++A+K L KT + G E + + EV + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLY 578
N++R+ G+ D+ LI EY P ++ + ++KL D ++ I + L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSY 127
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
+IHRD+K N+LLG + KI+DFG + + A S + GT+ Y+PPE
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSNGELKIADFGWS-VHAPSS---RRTTLCGTLDYLPPE 180
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++ K D++S GVL + + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 83 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 131
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 132 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 110/202 (54%), Gaps = 20/202 (9%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL----ILDWKKRVHIIEGITQGLLYLQE 581
LG C+ S + LI + MP L Y+ + + +L+W + I +G+ YL++
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLED 136
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
++HRDL N+L+ KI+DFG+A++ E E + E I ++ E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 642 KGVYSTKSDVFSFGVLLLQIIS 663
+Y+ +SDV+S+GV + ++++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMT 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
++ + ++ N++ L + +E ++ EY+ SL D + + +D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGM-ARIFAKESLEENTEQVVG 630
Q L +L +IHRD+K NILLG K++DFG A+I ++S ++VG
Sbjct: 125 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSEMVG 178
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T ++ PE T+ Y K D++S G++ +++I G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 34/295 (11%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-----FKNEVMLTAKLQHVNL 522
I +G G +G V G L + KT G+ E F +E + + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + G S M+I E+M N SLD +L + + + V ++ GI G+ YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD- 127
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP-----P 637
+ +HR L NIL+ + K+SDFG++R ++ + +G G IP P
Sbjct: 128 --MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAP 183
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGVEFV 696
E +++ SDV+S+G+++ +++S G+R + ++ +E Y L
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL---------- 233
Query: 697 DSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNINTPKKPA 751
+ P L ++ L C Q++ N RP ++ + L N N+ K A
Sbjct: 234 ---PPPMDCPSALH---QLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMA 282
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 110/202 (54%), Gaps = 20/202 (9%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL----ILDWKKRVHIIEGITQGLLYLQE 581
LG C+ S + LI + MP L Y+ + + +L+W + I +G+ YL++
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLED 135
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
++HRDL N+L+ KI+DFG+A++ E E + E I ++ E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 642 KGVYSTKSDVFSFGVLLLQIIS 663
+Y+ +SDV+S+GV + ++++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 87 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 135
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG A++ E E + E I ++
Sbjct: 136 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 85 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG A++ E E + E I ++
Sbjct: 134 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 85 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG A++ E E + E I ++
Sbjct: 134 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 85 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG A++ E E + E I ++
Sbjct: 134 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 140/328 (42%), Gaps = 50/328 (15%)
Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKK 495
G + +V ++ E + + LGEG +G V K +AVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 496 LSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDP 554
L + S + +E + ++ H ++I++ G C +LI EY SL +L +
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 555 IRKL--------------ILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 592
RK+ LD + G I+QG+ YL E + ++HRDL
Sbjct: 121 -RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDL 176
Query: 593 KVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVF 652
NIL+ E K KISDFG++R +E Q + ++ E +Y+T+SDV+
Sbjct: 177 AARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 653 SFGVLLLQIISGKRLSMLCGINENLSI-LEHAYELWKGGKGVEFVDSFLDDRNSPCKLMR 711
SFGVLL +I++ G N I E + L K G +E D N ++ R
Sbjct: 237 SFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPD------NCSEEMYR 283
Query: 712 CLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ L C ++ P+ RP ++S L+
Sbjct: 284 LM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 90 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 138
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG A++ E E + E I ++
Sbjct: 139 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 83 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 131
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG A++ E E + E I ++
Sbjct: 132 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 141/328 (42%), Gaps = 50/328 (15%)
Query: 442 GDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKK 495
G + +V ++ E + + LGEG +G V K +AVK
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 496 LSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDP 554
L + ++ + +E + ++ H ++I++ G C +LI EY SL +L +
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 555 IRKL--------------ILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 592
RK+ LD + G I+QG+ YL E + ++HRDL
Sbjct: 121 -RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDL 176
Query: 593 KVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVF 652
NIL+ E K KISDFG++R +E Q + ++ E +Y+T+SDV+
Sbjct: 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 653 SFGVLLLQIISGKRLSMLCGINENLSI-LEHAYELWKGGKGVEFVDSFLDDRNSPCKLMR 711
SFGVLL +I++ G N I E + L K G +E D N ++ R
Sbjct: 237 SFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPD------NCSEEMYR 283
Query: 712 CLEIALLCVQENPNDRPSMLEVSSMLKN 739
+ L C ++ P+ RP ++S L+
Sbjct: 284 LM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
++ + ++ N++ L + +E ++ EY+ SL D + + +D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGM-ARIFAKESLEENTEQVVG 630
Q L +L +IHRD+K NILLG K++DFG A+I ++S +VG
Sbjct: 125 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSXMVG 178
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T ++ PE T+ Y K D++S G++ +++I G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 13 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
++ + ++ N++ L + +E ++ EY+ SL D + + +D + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGM-ARIFAKESLEENTEQVVG 630
Q L +L +IHRD+K NILLG K++DFG A+I ++S +VG
Sbjct: 126 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSXMVG 179
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T ++ PE T+ Y K D++S G++ +++I G+
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
L G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 90 LGICLTSTVQ-LIMQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 138
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 139 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
L G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 83 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 131
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 132 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
+ S+ D + RF K+G+G G VY + + G+ +A+++++ E NE+
Sbjct: 13 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
++ + ++ N++ L + +E ++ EY+ SL D + + +D + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
Q L +L +IHR++K NILLG K++DFG E + +T +VGT
Sbjct: 126 CLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 180
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
++ PE T+ Y K D++S G++ +++I G+
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+ +L + TS + +E +E + A + + ++ R+
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 117 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 165
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 166 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 223 ESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 28/206 (13%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
L G +G VYKG+ +P GE +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIR--------KLILDWKKRVHIIEGITQGLL 577
LG C+ S + LI + MP C L D +R + +L+W + I +G+
Sbjct: 90 LGICLTSTVQ-LITQLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMN 138
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
YL++ ++HRDL N+L+ KI+DFG+A++ E E + E I ++
Sbjct: 139 YLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIIS 663
E +Y+ +SDV+S+GV + ++++
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 22/202 (10%)
Query: 471 KLGEGGYGPVYKGVLPC-------GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
K+GEG G V C G +AVK + Q E NEV++ QH N++
Sbjct: 52 KIGEGSTGIV------CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV 105
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYS 583
+ + EE ++ E++ +L D + ++ L+ ++ + E + Q L YL
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG 161
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKG 643
+IHRD+K +ILL + K+SDFG +K+ + +VGT ++ PE ++
Sbjct: 162 ---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKXLVGTPYWMAPEVISRS 216
Query: 644 VYSTKSDVFSFGVLLLQIISGK 665
+Y+T+ D++S G+++++++ G+
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGE 238
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 445 NRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF 504
++N P+ E + + +LG G +G V G +A+K + K +
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSE 63
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKK 564
+EF E + L H L+++ G C +I EYM N L YL + + ++
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 121
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
+ + + + + + YL+ +HRDL N L+ + K+SDFG++R L++
Sbjct: 122 LLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDE 174
Query: 625 TEQVVGT---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 175 ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 34/227 (14%)
Query: 465 RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS---KTSTQGFEEFKNEVMLTAKLQHV 520
++ + KLG+G YG V+K + GEV+AVKK+ + ST F+ ++LT H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 521 NLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
N++ +L +R L+++YM + L IR IL+ + +++ + + + Y
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKY 124
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAK---------ESLEENTEQV- 628
L ++HRD+K SNILL K++DFG++R F S+ ENTE
Sbjct: 125 LHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 629 ---------VGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGK 665
V T Y PE TK D++S G +L +I+ GK
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 445 NRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF 504
++N P+ E + + +LG G +G V G +A+K + K +
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSE 63
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKK 564
+EF E + L H L+++ G C +I EYM N L YL + + ++
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 121
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
+ + + + + + YL+ +HRDL N L+ + K+SDFG++R L++
Sbjct: 122 LLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDE 174
Query: 625 TEQVVGT---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKL---SKTSTQGFEEFKNEVMLTAKLQH 519
ER+ I +KLG GG VY + +A+K + + + + F+ EV +++L H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL--FDPIRKLILDWKKRVHIIEGITQGLL 577
N++ ++ + + L+ EY+ +L Y+ P L ++ I G+
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-----LSVDTAINFTNQILDGIK 125
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + + I+HRD+K NIL+ KI DFG+A+ ++ SL + T V+GT+ Y P
Sbjct: 126 HAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSP 181
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGK 665
E A +D++S G++L +++ G+
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTSTQGFEE--FKNEVMLTAK 516
ER++I LG+G +G V L C + I AVK ++K S + + EV L K
Sbjct: 22 ERYNIVCMLGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKR------VHIIE 570
L H N++++ DS ++ E L FD I K +KR II+
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIK-----RKRFSEHDAARIIK 128
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQ 627
+ G+ Y+ +++ I+HRDLK NILL K KI DFG++ F + + +
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKD 182
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+GT YI PE +G Y K DV+S GV+L ++SG
Sbjct: 183 RIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTSTQGFEE--FKNEVMLTAK 516
ER++I LG+G +G V L C + I AVK ++K S + + EV L K
Sbjct: 22 ERYNIVCMLGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKR------VHIIE 570
L H N++++ DS ++ E L FD I K +KR II+
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIK-----RKRFSEHDAARIIK 128
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQ 627
+ G+ Y+ +++ I+HRDLK NILL K KI DFG++ F + + +
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKD 182
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+GT YI PE +G Y K DV+S GV+L ++SG
Sbjct: 183 RIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTSTQGFEE--FKNEVMLTAK 516
ER++I LG+G +G V L C + I AVK ++K S + + EV L K
Sbjct: 22 ERYNIVCMLGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKR------VHIIE 570
L H N++++ DS ++ E L FD I K +KR II+
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIK-----RKRFSEHDAARIIK 128
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQ 627
+ G+ Y+ +++ I+HRDLK NILL K KI DFG++ F + + +
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKD 182
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+GT YI PE +G Y K DV+S GV+L ++SG
Sbjct: 183 RIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
+E E ++ +LG G +G V G +AVK + K + +EF E K
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMK 59
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
L H L++ G C ++ EY+ N L YL + L+ + + + + +G+
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGM 117
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IG 633
+L+ + IHRDL N L+ + K+SDFGM R L++ VGT +
Sbjct: 118 AFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYV----LDDQYVSSVGTKFPVK 170
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ PE YS+KSDV++FG+L+ ++ S
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 446 RNVPNLRVYSLAD---IEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTST 501
RN P ++ L + + E F + KLGEG YG VYK + G+++A+K++ S
Sbjct: 8 RNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD 67
Query: 502 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILD 561
+E E+ + + ++++ G + + ++ EY S+ + +R L
Sbjct: 68 --LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLT 123
Query: 562 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL 621
+ I++ +GL YL + IHRD+K NILL K++DFG+A
Sbjct: 124 EDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA 180
Query: 622 EENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
+ N V+GT ++ PE + Y+ +D++S G+ +++ GK
Sbjct: 181 KRNX--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 120 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 14/214 (6%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFK-NEVMLTAKLQ 518
+++ +F KLG G Y VYKG+ G +A+K++ S +G E+ L +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCY-LFDPIRKLILDWKKRVHIIEGITQ 574
H N++R+ + L++E+M N K +D + + R L L+ K + + Q
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK--YFQWQLLQ 119
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + E I+HRDLK N+L+ + + K+ DFG+AR F ++E V T+ Y
Sbjct: 120 GLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWY 174
Query: 635 IPPEYATKG-VYSTKSDVFSFGVLLLQIISGKRL 667
P+ YST D++S G +L ++I+GK L
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 21/225 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKLQ 518
AT R+ ++G G YG VYK P G +A+K + +G EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 519 ---HVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
H N++R++ C D E ++ L++E++ ++ L YL D L + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+GL +L I+HRDLK NIL+ K++DFG+ARI+ S + + VV
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVV 173
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 675
T+ Y PE + Y+T D++S G + ++ +R + CG +E
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG YG V V E +AVK + K + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 122 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEVI-----AVKKLSKTS--TQGFEEFKNEVMLTA 515
+E + KLG G YG V L C + + A+K + KTS T + EV +
Sbjct: 36 SEMYQRVKKLGSGAYGEV----LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCY----LFDPI-RKLILDWKKRVHIIE 570
L H N++++ F D L+ E CY LFD I ++ + II+
Sbjct: 92 LLDHPNIMKLYDFFEDKRNYYLVME--------CYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQ 627
+ G+ YL +++ I+HRDLK N+LL K KI DFG++ +F ++ ++
Sbjct: 144 QVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN---QKKMKE 197
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+GT YI PE K Y K DV+S GV+L +++G
Sbjct: 198 RLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G +A+K + K + +EF E + L H L+++ G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+I EYM N L YL + + ++ + + + + + + YL+ +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQ---FLH 127
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+ + K+SDFG++R L++ VG+ + + PPE +S
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 647 TKSDVFSFGVLLLQIIS 663
+KSD+++FGVL+ +I S
Sbjct: 184 SKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 15 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+I EYM N L YL + + ++ + + + + + + YL+ +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+ + K+SDFG++R L++ VG+ + + PPE +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 647 TKSDVFSFGVLLLQIIS 663
+KSD+++FGVL+ +I S
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G +A+K + K + +EF E + L H L+++ G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+I EYM N L YL + + ++ + + + + + + YL+ +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQ---FLH 134
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+ + K+SDFG++R L++ VG+ + + PPE +S
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 647 TKSDVFSFGVLLLQIIS 663
+KSD+++FGVL+ +I S
Sbjct: 191 SKSDIWAFGVLMWEIYS 207
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKLQ 518
AT R+ ++G G YG VYK P G +A+K + +G EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 519 ---HVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
H N++R++ C D E ++ L++E++ ++ L YL D L + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+GL +L I+HRDLK NIL+ K++DFG+ARI+ S + VV
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVV 173
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 675
T+ Y PE + Y+T D++S G + ++ +R + CG +E
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+I EYM N L YL + + ++ + + + + + + YL+ +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQ---FLH 123
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+ + K+SDFG++R L++ VG+ + + PPE +S
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 647 TKSDVFSFGVLLLQIIS 663
+KSD+++FGVL+ +I S
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKL--SKTSTQGFE-EFKNEVMLTAKLQHVN 521
F I LG+G +G VY ++A+K L S+ +G E + + E+ + A L H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRK-LILDWKKRVHIIEGITQGLLYLQ 580
++R+ + D LI EY P L + ++K D ++ I+E + L+Y
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
+IHRD+K N+LLG + KI+DFG + SL T + GT+ Y+PPE
Sbjct: 141 GKK---VIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPEMI 193
Query: 641 TKGVYSTKSDVFSFGVLLLQIISG 664
+++ K D++ GVL +++ G
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
E F+ +++G+G +G VYKG+ EV+A+K + + + E+ + E+ + ++
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKS-LDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
+ R G + S + +I EY+ S LD P+ + + I+ I +GL YL
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLH 133
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
+ IHRD+K +N+LL E K++DFG+A ++ N VGT ++ PE
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVI 188
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y K+D++S G+ +++ G+
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGE 213
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 21/228 (9%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYK----GV--LPCGEVIAVKKLSKTSTQG-FEE 506
Y + E +R ++ LG G +G V + G+ +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 507 FKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIRKL 558
+E+ + + H+N++ +LG C M+I E+ +L YL F P + L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 559 ILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARI 615
D+ H+I + +G+ +L SR IHRDL NILL E KI DFG+AR
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLA--SR-KXIHRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 616 FAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G+G +G V G G +AVK + +T + F E + +L+H NL+
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 68
Query: 524 RVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
++LG ++ + + ++ EYM SL YL R +L + + + + YL+
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--IGYIPPEYA 640
+ +HRDL N+L+ E K+SDFG+ + E ++ Q G + + PE
Sbjct: 128 N---FVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEAL 177
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGKRL 667
+ +STKSDV+SFG+LL +I S R+
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 469 RNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
R LG+G YG VY G +V IA+K++ + ++ + E+ L L+H N+++ LG
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
++ + E +P SL L L + + + I +GL YL + I
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---I 143
Query: 588 IHRDLKVSNILLGE-AMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGV-- 644
+HRD+K N+L+ + KISDFG ++ A + TE GT+ Y+ PE KG
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 645 YSTKSDVFSFGVLLLQIISGK 665
Y +D++S G ++++ +GK
Sbjct: 202 YGKAADIWSLGCTIIEMATGK 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKLQ 518
AT R+ ++G G YG VYK P G +A+K + +G EV L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 519 ---HVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
H N++R++ C D E ++ L++E++ ++ L YL D L + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+GL +L I+HRDLK NIL+ K++DFG+ARI+ S + VV
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVV 173
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 675
T+ Y PE + Y+T D++S G + ++ +R + CG +E
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans
Wl-12
Length = 419
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 54/318 (16%)
Query: 74 NQIAKFADTVKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF 133
NQ+ K +K+ NP++ TI+S+G +N +S + ++ R+ F +S++ R Y F
Sbjct: 111 NQLNK----LKQTNPNLKTIISVGGWTWSNR--FSDVAATAATREVFANSAVDFLRKYNF 164
Query: 134 RGLDFAWTAPNTST---------DMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARF 184
G+D W P + D N LL + R KLDA + + L+ A
Sbjct: 165 DGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIR---EKLDAAGAVDGKKYLLTIASG 221
Query: 185 RYSPPANSYLLNSIQRNLNWIHAVTASY---------------YEPVSTNFTAPPAALYG 229
+ A + L I ++WI+ +T + Y+P ++ P A +
Sbjct: 222 ASATYAANTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFN 281
Query: 230 SISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNG-----IGAAAAGP 284
+G ++ G+ A KLV+ +PFYG W NG G ++ G
Sbjct: 282 VAAGAQGH---------LDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVG- 331
Query: 285 ALYDSGLVTYKKIK-NHIKTYGPDVQVMYNSTYEVNYF--STGTVWFGFDDVEAVRAKIA 341
+++G + ++ N+I G +N T +V Y ++ + +DD E+V K A
Sbjct: 332 -TWEAGSFDFYDLEANYINKNG--YTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTA 388
Query: 342 YAKEKRLLGYYAWQVSFD 359
Y K K L G W++S D
Sbjct: 389 YIKSKGLGGAMFWELSGD 406
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 469 RNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
R LG+G YG VY G +V IA+K++ + ++ + E+ L L+H N+++ LG
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
++ + E +P SL L L + + + I +GL YL + I
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---I 129
Query: 588 IHRDLKVSNILLGE-AMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGV-- 644
+HRD+K N+L+ + KISDFG ++ A + TE GT+ Y+ PE KG
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 645 YSTKSDVFSFGVLLLQIISGK 665
Y +D++S G ++++ +GK
Sbjct: 188 YGKAADIWSLGCTIIEMATGK 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 21/228 (9%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYK----GV--LPCGEVIAVKKLSKTSTQG-FEE 506
Y + E +R ++ LG G +G V + G+ +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 507 FKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIRKL 558
+E+ + + H+N++ +LG C M+I E+ +L YL F P + L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 559 ILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARI 615
D+ H+I + +G+ +L SR IHRDL NILL E KI DFG+AR
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLA--SR-KXIHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 616 FAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 114/221 (51%), Gaps = 15/221 (6%)
Query: 447 NVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGF 504
VP ++ ++AD E E F+ ++G+G +G V+KG+ +V+A+K + + +
Sbjct: 10 QVPGMQ-NNIADPE---ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI 65
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKK 564
E+ + E+ + ++ + + G + + +I EY+ S D +R D +
Sbjct: 66 EDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQ 121
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
+++ I +GL YL + IHRD+K +N+LL E K++DFG+A ++ N
Sbjct: 122 IATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 178
Query: 625 TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T VGT ++ PE + Y +K+D++S G+ +++ G+
Sbjct: 179 T--FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVN 521
E + ++G G +G V+ G L ++AVK +T + +F E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
++R++G C + ++ E + +L +L + K + ++ G+ YL+
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV--KTLLQMVGDAAAGMEYLES 231
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP----- 636
IHRDL N L+ E KISDFGM+R A + G + +P
Sbjct: 232 K---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA-----DGVXAASGGLRQVPVKWTA 283
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIIS 663
PE G YS++SDV+SFG+LL + S
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E++ K+GEG YG VYK G ++A+K++ +G E+ L +L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N++ ++ L++E+M K L L D + + D + ++++ + + +G+
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVA 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ ++ I+HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 134 HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAP 188
Query: 638 EYATKG-VYSTKSDVFSFGVLLLQIISGKRL 667
+ YST D++S G + ++I+GK L
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E++ K+GEG YG VYK G ++A+K++ +G E+ L +L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N++ ++ L++E+M K L L D + + D + ++++ + + +G+
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVA 133
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ ++ I+HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 134 HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAP 188
Query: 638 EYATKG-VYSTKSDVFSFGVLLLQIISGKRL 667
+ YST D++S G + ++I+GK L
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHV 520
E + + LGEG G V V E +AVK + K + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYL 579
N+++ G + + L EY L FD I I + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL E KISDFG+A +F + E ++ GT+ Y+ PE
Sbjct: 121 HG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 640 ATKGVYSTKS-DVFSFGVLLLQIISGK 665
+ + + DV+S G++L +++G+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVN 521
E + ++G G +G V+ G L ++AVK +T + +F E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
++R++G C + ++ E + +L +L + K + ++ G+ YL+
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV--KTLLQMVGDAAAGMEYLES 231
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
IHRDL N L+ E KISDFGM+R A + + + PE
Sbjct: 232 K---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 642 KGVYSTKSDVFSFGVLLLQIIS 663
G YS++SDV+SFG+LL + S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 470 NKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+LG G +G V G G+ K+ K + +EF E + L H L+++ G C
Sbjct: 15 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+I EYM N L YL + + ++ + + + + + + YL+ +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---IGYIPPEYATKGVYS 646
RDL N L+ + K+SDFG++R L++ G+ + + PPE +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 647 TKSDVFSFGVLLLQIIS 663
+KSD+++FGVL+ +I S
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G +G V G G +AVK + +T + F E + +L+H NL+++LG ++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 532 SEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 590
+ + ++ EYM SL YL R +L + + + + YL+ + +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 591 DLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--IGYIPPEYATKGVYSTK 648
DL N+L+ E K+SDFG+ + E ++ Q G + + PE + +STK
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 649 SDVFSFGVLLLQIISGKRL 667
SDV+SFG+LL +I S R+
Sbjct: 195 SDVWSFGILLWEIYSFGRV 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 109/202 (53%), Gaps = 20/202 (9%)
Query: 472 LGEGGYGPVYKGV-LPCGE----VIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LG G +G VYKG+ +P GE +A+K L + TS + +E +E + A + + R+
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL----ILDWKKRVHIIEGITQGLLYLQE 581
LG C+ S + L+ + MP L ++ + +L +L+W + I +G+ YL++
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED 137
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ ++HRDL N+L+ KI+DFG+AR+ + E + + I ++ E
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 642 KGVYSTKSDVFSFGVLLLQIIS 663
+ ++ +SDV+S+GV + ++++
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G +G V G G +AVK + +T + F E + +L+H NL+++LG ++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 532 SEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 590
+ + ++ EYM SL YL R +L + + + + YL+ + +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 591 DLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--IGYIPPEYATKGVYSTK 648
DL N+L+ E K+SDFG+ + E ++ Q G + + PE + +STK
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 649 SDVFSFGVLLLQIISGKRL 667
SDV+SFG+LL +I S R+
Sbjct: 367 SDVWSFGILLWEIYSFGRV 385
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL---SKTSTQGFE-EFKNEVMLTAKLQHVN 521
F I LG+G +G VY + I K+ S+ +G E + + E+ + + L+H N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
++R+ + D + L+ E+ P L L R D ++ +E + L Y E
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHE 133
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+IHRD+K N+L+G + KI+DFG ++ + + GT+ Y+PPE
Sbjct: 134 RK---VIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 642 KGVYSTKSDVFSFGVLLLQIISG 664
+ K D++ GVL + + G
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 24/228 (10%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEF-----KNEVMLTA 515
AT R+ ++G G YG VYK P G +A+K + + G EV L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 516 KLQ---HVNLIRVLGFC----IDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
+L+ H N++R++ C D E ++ L++E++ ++ L YL D L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
++ +GL +L I+HRDLK NIL+ K++DFG+ARI+ S +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTP 178
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 675
VV T+ Y PE + Y+T D++S G + ++ +R + CG +E
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 470 NKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLG 527
+KLGEG Y VYKG + ++A+K++ +G EV L L+H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
+ L++EY+ +K L YL D I++ + + +GL Y R +
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGV-YS 646
+HRDLK N+L+ E + K++DFG+AR AK + + V T+ Y PP+ YS
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 647 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSIL 680
T+ D++ G + ++ +G+ L + E L +
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL---SKTSTQGFE-EFKNEVMLTAKLQHVN 521
F I LG+G +G VY + I K+ S+ +G E + + E+ + + L+H N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
++R+ + D + L+ E+ P L L R D ++ +E + L Y E
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHE 132
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+IHRD+K N+L+G + KI+DFG ++ + + GT+ Y+PPE
Sbjct: 133 RK---VIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 642 KGVYSTKSDVFSFGVLLLQIISG 664
+ K D++ GVL + + G
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKL---SKTSTQGFE-EFKNEVMLTAKLQHVN 521
F I LG+G +G VY + I K+ S+ +G E + + E+ + + L+H N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
++R+ + D + L+ E+ P L L R D ++ +E + L Y E
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHE 132
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+IHRD+K N+L+G + KI+DFG ++ + + GT+ Y+PPE
Sbjct: 133 RK---VIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 642 KGVYSTKSDVFSFGVLLLQIISG 664
+ K D++ GVL + + G
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G +G V G G +AVK + +T + F E + +L+H NL+++LG ++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 532 SEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 590
+ + ++ EYM SL YL R +L + + + + YL+ + +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 591 DLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--IGYIPPEYATKGVYSTK 648
DL N+L+ E K+SDFG+ + E ++ Q G + + PE + +STK
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 649 SDVFSFGVLLLQIISGKRL 667
SDV+SFG+LL +I S R+
Sbjct: 180 SDVWSFGILLWEIYSFGRV 198
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
E F+ K+G+G +G V+KG+ +V+A+K + + + E+ + E+ + ++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKS-LDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
+ + G + + +I EY+ S LD P LD + I+ I +GL YL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 121
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
+ IHRD+K +N+LL E + K++DFG+A ++ NT VGT ++ PE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVI 176
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y +K+D++S G+ +++ G+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
E F+ K+G+G +G V+KG+ +V+A+K + + + E+ + E+ + ++
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKS-LDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
+ + G + + +I EY+ S LD P LD + I+ I +GL YL
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 141
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
+ IHRD+K +N+LL E + K++DFG+A ++ NT VGT ++ PE
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVI 196
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y +K+D++S G+ +++ G+
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGE 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 472 LGEGGYGPVYKG-VLPCGE-----VIAVKKLSKTSTQGFEE-FKNEVMLTAKL-QHVNLI 523
LG G +G V + G+ +AVK L T+ +E +E+ + + L QH N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL--------FDP---IRKLILDWKKRVHIIEGI 572
+LG C ++I EY L +L DP I L + +H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
QG+ +L + IHRD+ N+LL KI DFG+AR +S +
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGG 690
++ PE VY+ +SDV+S+G+LL +I S G+N IL ++ Y+L K
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK-- 281
Query: 691 KGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNET 741
G + +N I C P RP+ ++ S L+ +
Sbjct: 282 DGYQMAQPAFAPKN-------IYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 115
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWY 170
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 472 LGEGGYGPVYKG-VLPCGE-----VIAVKKLSKTSTQGFEE-FKNEVMLTAKL-QHVNLI 523
LG G +G V + G+ +AVK L T+ +E +E+ + + L QH N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL-------FDPIRKLILDWKKRVHIIEGITQGL 576
+LG C ++I EY L +L D L+ + +H + QG+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+L + IHRD+ N+LL KI DFG+AR +S + ++
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGVE 694
PE VY+ +SDV+S+G+LL +I S G+N IL ++ Y+L K G +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK--DGYQ 273
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNET 741
+N I C P RP+ ++ S L+ +
Sbjct: 274 MAQPAFAPKN-------IYSIMQACWALEPTHRPTFQQICSFLQEQA 313
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 472 LGEGGYGPVYKG-VLPCGE-----VIAVKKLSKTSTQGFEE-FKNEVMLTAKL-QHVNLI 523
LG G +G V + G+ +AVK L T+ +E +E+ + + L QH N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL-------FDPIRKLILDWKKRVHIIEGITQGL 576
+LG C ++I EY L +L D L+ + +H + QG+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+L + IHRD+ N+LL KI DFG+AR +S + ++
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGVE 694
PE VY+ +SDV+S+G+LL +I S G+N IL ++ Y+L K G +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK--DGYQ 281
Query: 695 FVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNET 741
+N I C P RP+ ++ S L+ +
Sbjct: 282 MAQPAFAPKN-------IYSIMQACWALEPTHRPTFQQICSFLQEQA 321
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + Q L L +IH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 650 DVFSFGVLLLQIISGK 665
D++S G+++++++ G+
Sbjct: 198 DIWSLGIMVIEMVDGE 213
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 117
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 638 EYAT-KGVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + Q L L +IH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 650 DVFSFGVLLLQIISGK 665
D++S G+++++++ G+
Sbjct: 202 DIWSLGIMVIEMVDGE 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 114/218 (52%), Gaps = 20/218 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL 517
A +++ ++GEG YG V+K + G +A+K++ +T +G EV + L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 518 Q---HVNLIRVLGFCI----DSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
+ H N++R+ C D E ++ L++E++ ++ L YL D + + + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
+ +GL +L + ++HRDLK NIL+ + + K++DFG+ARI+ S + VV
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
T+ Y PE + Y+T D++S G + ++ K L
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + Q L L +IH
Sbjct: 98 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 650 DVFSFGVLLLQIISGK 665
D++S G+++++++ G+
Sbjct: 209 DIWSLGIMVIEMVDGE 224
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 117
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 117
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 116
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + Q L L +IH
Sbjct: 96 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 650 DVFSFGVLLLQIISGK 665
D++S G+++++++ G+
Sbjct: 207 DIWSLGIMVIEMVDGE 222
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 116
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYLAS 150
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 151 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 46/279 (16%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVK------KLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV 525
LGEG +G V +G L + ++K KL +S + EEF +E H N+IR+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 526 LGFCIDSEER-----MLIYEYMPNKSLDCYLF----------DPIRKLILDWKKRVHIIE 570
LG CI+ + M+I +M L YL P++ L+ +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL-------KFMV 154
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I G+ YL S +HRDL N +L + M ++DFG+++
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGG 690
+ +I E VY++KSDV++FGV + +I + + ++ G+ + Y+ G
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT-RGMTPYPGVQNH-----EMYDYLLHG 265
Query: 691 KGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
++ + LD+ EI C + +P DRP+
Sbjct: 266 HRLKQPEDCLDE---------LYEIMYSCWRTDPLDRPT 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 124
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 179
Query: 638 EYAT-KGVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 40/291 (13%)
Query: 472 LGEGGYGPVYKG-VLPCGE-----VIAVKKLSKTSTQGFEE-FKNEVMLTAKL-QHVNLI 523
LG G +G V + G+ +AVK L T+ +E +E+ + + L QH N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILD-----------WKKRVHIIEGI 572
+LG C ++I EY L +L R L D + +H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
QG+ +L + IHRD+ N+LL KI DFG+AR +S +
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGG 690
++ PE VY+ +SDV+S+G+LL +I S G+N IL ++ Y+L K
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK-- 281
Query: 691 KGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNET 741
G + +N I C P RP+ ++ S L+ +
Sbjct: 282 DGYQMAQPAFAPKN-------IYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 121
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 176
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 124
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 179
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
H N++++L + L++E++ D + + L K + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 118
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
+ ++HRDLK N+L+ K++DFG+AR F E V T+ Y PE
Sbjct: 119 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 173
Query: 639 YATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
YST D++S G + ++++ + L
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 60
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
LQH N++R+ + L+++ + L D + + H I+ I + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 117
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIG 633
Y I+HR+LK N+LL K K++DFG+A I +S E GT G
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDS--EAWHGFAGTPG 171
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE K YS D+++ GV+L ++ G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLS 117
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N++++L + L++E++ D + + L K + + QGL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLA 119
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F E V T+ Y P
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 114/218 (52%), Gaps = 20/218 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL 517
A +++ ++GEG YG V+K + G +A+K++ +T +G EV + L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 518 Q---HVNLIRVLGFCI----DSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
+ H N++R+ C D E ++ L++E++ ++ L YL D + + + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
+ +GL +L + ++HRDLK NIL+ + + K++DFG+ARI+ S + VV
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
T+ Y PE + Y+T D++S G + ++ K L
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
LQH N++R+ + L+++ + L D + + H I+ I + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 118
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIG 633
Y I+HR+LK N+LL K K++DFG+A I +S E GT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDS--EAWHGFAGTPG 172
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE K YS D+++ GV+L ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + Q L L +IH
Sbjct: 218 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 650 DVFSFGVLLLQIISGK 665
D++S G+++++++ G+
Sbjct: 329 DIWSLGIMVIEMVDGE 344
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 84
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
LQH N++R+ + L+++ + L D + + H I+ I + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 141
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIG 633
Y I+HR+LK N+LL K K++DFG+A I +S E GT G
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDS--EAWHGFAGTPG 195
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE K YS D+++ GV+L ++ G
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 114/218 (52%), Gaps = 20/218 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG--VLPCGEVIAVKKLS-KTSTQGFE-EFKNEVMLTAKL 517
A +++ ++GEG YG V+K + G +A+K++ +T +G EV + L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 518 Q---HVNLIRVLGFCI----DSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
+ H N++R+ C D E ++ L++E++ ++ L YL D + + + + ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
+ +GL +L + ++HRDLK NIL+ + + K++DFG+ARI+ S + VV
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
T+ Y PE + Y+T D++S G + ++ K L
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
++ + ++ +LG+G + V + G+ ++I KKLS + F++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
LQH N++R+ + L+++ + L D + + H I+ I + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 118
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIG 633
Y I+HR+LK N+LL K K++DFG+A I +S E GT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDS--EAWHGFAGTPG 172
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE K YS D+++ GV+L ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-FDPIRKLILDWKKRVHIIEGITQGLLYL 579
N++++L + L++E++ ++ L ++ + + L K + + QGL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSY--LFQLLQGLAFC 118
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 173
Query: 640 ATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
YST D++S G + ++++ + L
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYLAS 169
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 170 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+ +HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+ +HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPV-YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + Q L L +IH
Sbjct: 141 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 650 DVFSFGVLLLQIISGK 665
D++S G+++++++ G+
Sbjct: 252 DIWSLGIMVIEMVDGE 267
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
E F+ K+G+G +G V+KG+ +V+A+K + + + E+ + E+ + ++
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKS-LDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
+ + G + + +I EY+ S LD P LD + I+ I +GL YL
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 136
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
+ IHRD+K +N+LL E + K++DFG+A ++ N VGT ++ PE
Sbjct: 137 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVI 191
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y +K+D++S G+ +++ G+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGE 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N++++L + L++E++ D + + L K + + QGL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLA 120
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F E V T+ Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 144
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+ +HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+ +HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYLAS 170
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 171 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 23/230 (10%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYK----GV--LPCGEVIAVKKLSKTSTQG-FEE 506
Y + E +R + LG G +G V + G+ +AVK L + +T
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 507 FKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIRK- 557
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 558 -LILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA 613
L D+ H+I + +G+ +L SR IHRDL NILL E KI DFG+A
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLA--SR-KXIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 614 RIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
R K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 147
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+ +HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYLAS 143
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 144 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYLAS 148
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKESLE-ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR ++ KE N + ++ E
Sbjct: 149 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHVN 521
E F+ K+G+G +G V+KG+ +V+A+K + + + E+ + E+ + ++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKS-LDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
+ + G + + +I EY+ S LD P LD + I+ I +GL YL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 121
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
+ IHRD+K +N+LL E + K++DFG+A ++ N VGT ++ PE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVI 176
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGK 665
+ Y +K+D++S G+ +++ G+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGE 201
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R ++ LG G +G V + C +AVK L + +T
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 76
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 77 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT 136
Query: 557 --KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFG 611
L D+ H+I + +G+ +L SR IHRDL NILL E KI DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 612 MARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP---NKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 115
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 115
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
H N++++L + L++E++ K +D I ++ + ++ + + QG
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQG 115
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 636 PPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 116
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 117 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 117
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 116
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 117 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 116
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 117 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 115
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMP---NKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 117
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 117
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
H N++++L + L++E++ K +D I ++ + ++ + + QG
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQG 115
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 636 PPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 118
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 119 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 173
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 51/285 (17%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVL----PCGEVIAVKKL--SKTSTQGFEEFKNEVMLTA 515
+ E++ K+GEG +G K +L G +K++ S+ S++ EE + EV + A
Sbjct: 22 SMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL-------DCYLFDPIRKLILDWKKRVHI 568
++H N+++ ++ ++ +Y L LF ILDW
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ--EDQILDW------ 130
Query: 569 IEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQV 628
Q L L+ I+HRD+K NI L + ++ DFG+AR+ S E
Sbjct: 131 ---FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARAC 185
Query: 629 VGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+GT Y+ PE Y+ KSD+++ G +L + L L+HA+E
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYE----------------LCTLKHAFE--- 226
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQ---ENPNDRPSM 730
G V + P L ++ L Q NP DRPS+
Sbjct: 227 AGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSV 271
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
H N++++L + L++E++ K +D I ++ + ++ + + QG
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQG 115
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 636 PPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 17/213 (7%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 518
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
H N++++L + L++E++ K +D I ++ + ++ + + QG
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQG 115
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 636 PPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 11/211 (5%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N++++L + L++E++ ++ L ++ I + ++ + + QGL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQ-LLQGLA 120
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F E V T+ Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEE--FKNEVMLTAKL 517
+ E + + +G G YG K G+++ K+L S E+ +EV L +L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 518 QHVNLIRVLGFCIDSEERML--IYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
+H N++R ID L + EY L + ++ + ++ +TQ
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER--QYLDEEFVLRVMTQL 120
Query: 576 LLYLQEYSRL-----TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
L L+E R T++HRDLK +N+ L K+ DFG+ARI + E+ ++ VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEFVG 178
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
T Y+ PE + Y+ KSD++S G LL ++ +
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 38/221 (17%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGE-------VIAVKKLS-----------KTSTQGFEEF 507
F +R KLG G YG V L C E I V K S K + EE
Sbjct: 39 FKVR-KLGSGAYGEV----LLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDP-IRKLILDWKKRV 566
NE+ L L H N+I++ D + L+ E+ LF+ I + D
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQIINRHKFDECDAA 149
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKESLEE 623
+I++ I G+ YL +++ I+HRD+K NILL + KI DFG++ F+K+
Sbjct: 150 NIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--- 203
Query: 624 NTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+GT YI PE K Y+ K DV+S GV++ ++ G
Sbjct: 204 KLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 118
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F E V T+ Y P
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 116
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F E V T+ Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLI 523
+ ++ +LG GG+G V + + GE +A+K+ + S + E + E+ + KL H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 524 RV------LGFCIDSEERMLIYEYMPNKSLDCYL--FD--------PIRKLILDWKKRVH 567
L ++ +L EY L YL F+ PIR L+ D
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD------ 130
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLEEN 624
I+ L YL E IIHRDLK NI+L + + KI D G A+ + L
Sbjct: 131 ----ISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--- 180
Query: 625 TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKR 666
+ VGT+ Y+ PE + Y+ D +SFG L + I+G R
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLI 523
+ ++ +LG GG+G V + + GE +A+K+ + S + E + E+ + KL H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 524 RV------LGFCIDSEERMLIYEYMPNKSLDCYL--FD--------PIRKLILDWKKRVH 567
L ++ +L EY L YL F+ PIR L+ D
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD------ 129
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLEEN 624
I+ L YL E IIHRDLK NI+L + + KI D G A+ + L
Sbjct: 130 ----ISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--- 179
Query: 625 TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKR 666
+ VGT+ Y+ PE + Y+ D +SFG L + I+G R
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFLAS 152
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE--ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR + + N + ++ E
Sbjct: 153 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFLAS 151
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKE--SLEENTEQVVGTIGYIPPE 638
+HRDL N +L E K++DFG+AR ++ KE S+ T + + ++ E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-PVKWMALE 207
Query: 639 YATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFLAS 149
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE--ENTEQVVGTIGYIPPEY 639
+HRDL N +L E K++DFG+AR + + N + ++ E
Sbjct: 150 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 640 ATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFLAS 152
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKE--SLEENTEQVVGTIGYIPPE 638
+HRDL N +L E K++DFG+AR ++ KE S+ T + + ++ E
Sbjct: 153 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-PVKWMALE 208
Query: 639 YATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFLAS 156
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKE--SLEENTEQVVGTIGYIPPE 638
+HRDL N +L E K++DFG+AR ++ KE S+ T + + ++ E
Sbjct: 157 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-PVKWMALE 212
Query: 639 YATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 116
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F E V T+ Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+ K+ T T+G E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 117
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
E F K+GEG YG VYK GEV+A+ K+ T T+G E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N++++L + L++E++ K +D I ++ + ++ + + QGL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLA 116
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+ + ++HRDLK N+L+ K++DFG+AR F + T +VV T+ Y P
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 638 EYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
E YST D++S G + ++++ + L
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 75
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 192
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 66
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 183
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLI-YEYMPNKSLDCYLFDPIRKL--ILDWKKRVHII 569
+ ++L H ++ L FC +E++ Y N L Y IRK+ + R +
Sbjct: 90 VMSRLDHPFFVK-LYFCFQDDEKLYFGLSYAKNGELLKY----IRKIGSFDETCTRFYTA 144
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
E I L YL IIHRDLK NILL E M +I+DFG A++ + ES + V
Sbjct: 145 E-IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT Y+ PE T+ SD+++ G ++ Q+++G
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 77
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIRK 557
+E+ + + H+N++ +LG C M+I E+ +L YL F P ++
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE 137
Query: 558 LILDWKKRVHIIEG-------ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
D K +E + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 138 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 194
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 195 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFLAS 151
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKE--SLEENTEQVVGTIGYIPPE 638
+HRDL N +L E K++DFG+AR ++ KE S+ T + + ++ E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-PVKWMALE 207
Query: 639 YATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVL--PCGEVI--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNLIRVL 526
+G G +G VY G L G+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 527 GFCIDSE-ERMLIYEYMPNKSLDCYL----FDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
G C+ SE +++ YM + L ++ +P K ++ + +V +G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 208
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKE--SLEENTEQVVGTIGYIPPE 638
+ +HRDL N +L E K++DFG+AR ++ KE S+ T + + ++ E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-PVKWMALE 266
Query: 639 YATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 66
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 183
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKL 517
+ E F K+GEG YG VYK GEV+A+KK+ T T+G E+ L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPN---KSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N++++L + L++E++ K +D I ++ + ++ + + Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLI----KSYLFQ-LLQ 117
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
GL + + ++HRDLK N+L+ K++DFG+AR F E V T+ Y
Sbjct: 118 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 635 IPPEYATK-GVYSTKSDVFSFGVLLLQIISGKRL 667
PE YST D++S G + ++++ + L
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+ S
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+NT + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 75
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 192
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 193 GLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea
pdb|3G6M|A Chain A, Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea In Complex With
A Potent Inhibitor Caffeine
Length = 406
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 83 VKKKNPSITTILSIGQGK-DTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWT 141
+KK N S+ +LSIG TN+ +S + R +F +++ + +GF G+D W
Sbjct: 98 LKKANRSLKIMLSIGGWTWSTNFPAAAS---TEATRATFAKTAVEFMKDWGFDGIDVDWE 154
Query: 142 APNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL-----LN 196
P + TD N+ LL R +LD+ ++T + + P++ + L
Sbjct: 155 YPASETDANNMVLLLQRVR---QELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLG 211
Query: 197 SIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSAD 254
S+ N+N + A ++ VS + T LY S S + ST + A+I G+ A
Sbjct: 212 SVLDNINLMAYDYAGSWDSVSGHQT----NLYPSTSNPSSTPFSTKAAVDAYIAAGVPAS 267
Query: 255 KLVMCLPFYGYAWTLVKPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMYNS 314
K+++ +P YG A V + G + G ++SG+ YK + T D +
Sbjct: 268 KIILGMPIYGRA--FVGTDGPGKPYSTIGEGSWESGIWDYKVLPKAGATVITDSAA--GA 323
Query: 315 TYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
TY +Y S+ +D + VR K++YAK L G W+ S D
Sbjct: 324 TY--SYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASAD 366
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKG--------VLPCGEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNL 522
+G+G +G VY G + C A+K LS+ T Q E F E +L L H N+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQC----AIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 523 IRVLGFCIDSEE-RMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+ ++G + E ++ YM + L ++ P R + K + + +G+ YL E
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAE 142
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IFAKE--SLEENTEQVVGTIGYIPPE 638
+HRDL N +L E+ K++DFG+AR I +E S++++ + + + E
Sbjct: 143 QK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL-PVKWTALE 198
Query: 639 YATKGVYSTKSDVFSFGVLLLQIIS 663
++TKSDV+SFGVLL ++++
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 472 LGEGGYGPVYKGVLPCGEV-----IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
LG G +G V+K C E +A K + + EE KNE+ + +L H NLI++
Sbjct: 97 LGGGRFGQVHK----CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYLQEYSRL 585
+ +L+ EY+ L + D L LD + ++ I +G+ ++ + +
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQ---M 206
Query: 586 TIIHRDLKVSNILL--GEAMKPKISDFGMARIFA-KESLEENTEQVVGTIGYIPPEYATK 642
I+H DLK NIL +A + KI DFG+AR + +E L+ N GT ++ PE
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLAPEVVNY 262
Query: 643 GVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 675
S +D++S GV+ ++SG LS G N+
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSG--LSPFLGDND 293
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 472 LGEGGYGPVYKG-VLPCGE-----VIAVKKLSKTSTQGFEE-FKNEVMLTAKL-QHVNLI 523
LG G +G V + G+ +AVK L T+ +E +E+ + + L QH N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR--KLILDWKKRVHIIE 570
+LG C ++I EY L +L ++P + L + +H
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+ QG+ +L + IHRD+ N+LL KI DFG+AR +S
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWK 688
+ ++ PE VY+ +SDV+S+G+LL +I S G+N IL ++ Y+L K
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK 283
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNET 741
G + +N I C P RP+ ++ S L+ +
Sbjct: 284 --DGYQMAQPAFAPKN-------IYSIMQACWALEPTHRPTFQQICSFLQEQA 327
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC--GEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
A E + LGEG +G VY+GV GE I AVK K T E+F +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL---FDPIRKLILDWKKRVHIIEGIT 573
L H ++++++G I+ E +I E P L YL + ++ L L V I
Sbjct: 70 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-----VLYSLQIC 123
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
+ + YL+ + +HRD+ V NIL+ K+ DFG++R E + + + I
Sbjct: 124 KAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIK 179
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKR 666
++ PE ++T SDV+ F V + +I+S GK+
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 471 KLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
K+GEG G V G+ +AVKK+ Q E NEV++ H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
+ +E ++ E++ +L D + ++ ++ + + + L YL +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 590 RDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKS 649
RD+K +ILL + K+SDFG +KE + +VGT ++ PE ++ Y T+
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 650 DVFSFGVLLLQIISGK 665
D++S G++++++I G+
Sbjct: 223 DIWSLGIMVIEMIDGE 238
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G G YG VYKG L +AVK S + Q F KN + ++H N+ R F +
Sbjct: 21 IGRGRYGAVYKGSLD-ERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIAR---FIVG 75
Query: 532 SE--------ERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ--- 580
E E +L+ EY PN SL YL DW + +T+GL YL
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 581 ---EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL----EENTEQV--VGT 631
++ + I HRDL N+L+ ISDFG++ L EE+ + VGT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 632 IGYIPPEYATKGV-------YSTKSDVFSFGVLLLQII 662
I Y+ PE V + D+++ G++ +I
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC--GEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
A E + LGEG +G VY+GV GE I AVK K T E+F +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF---DPIRKLILDWKKRVHIIEGIT 573
L H ++++++G I+ E +I E P L YL + ++ L L V I
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-----VLYSLQIC 119
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
+ + YL+ + +HRD+ V NIL+ K+ DFG++R E + + + I
Sbjct: 120 KAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIK 175
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKR 666
++ PE ++T SDV+ F V + +I+S GK+
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVN 521
E++ K+GEG YG VYK GE A+KK+ + +G E+ + +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG----ITQGLL 577
++++ + +L++E++ D KK + + EG +T
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSF 105
Query: 578 YLQEYSRLT------IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
LQ + + ++HRDLK N+L+ + KI+DFG+AR F + + T +VV T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-T 163
Query: 632 IGYIPPEYATKG-VYSTKSDVFSFGVLLLQIISGKRL 667
+ Y P+ YST D++S G + ++++G L
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPL 200
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC--GEVI--AVKKLSKTST-QGFEEFKNEVMLTAK 516
A E + LGEG +G VY+GV GE I AVK K T E+F +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL---FDPIRKLILDWKKRVHIIEGIT 573
L H ++++++G I+ E +I E P L YL + ++ L L V I
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL-----VLYSLQIC 135
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
+ + YL+ + +HRD+ V NIL+ K+ DFG++R E + + + I
Sbjct: 136 KAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIK 191
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS-GKR 666
++ PE ++T SDV+ F V + +I+S GK+
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVN 521
E++ K+GEG YG VYK GE A+KK+ + +G E+ + +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG----ITQGLL 577
++++ + +L++E++ D KK + + EG +T
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSF 105
Query: 578 YLQEYSRLT------IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
LQ + + ++HRDLK N+L+ + KI+DFG+AR F + + T +VV T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVV-T 163
Query: 632 IGYIPPEYATKG-VYSTKSDVFSFGVLLLQIISGKRL 667
+ Y P+ YST D++S G + ++++G L
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 75
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 192
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 66
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 183
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 66
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 183
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHVN 521
E++ K+GEG YG VYK GE A+KK+ + +G E+ + +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG----ITQGLL 577
++++ + +L++E++ D KK + + EG +T
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSF 105
Query: 578 YLQEYSRLT------IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
LQ + + ++HRDLK N+L+ + KI+DFG+AR F + + T ++V T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIV-T 163
Query: 632 IGYIPPEYATKG-VYSTKSDVFSFGVLLLQIISGKRL 667
+ Y P+ YST D++S G + ++++G L
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 27/233 (11%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYKG-------VLPCGEVIAVKKLSKTSTQG-FE 505
Y + E +R + LG G +G V + C +AVK L + +T
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC-RTVAVKMLKEGATHSEHR 112
Query: 506 EFKNEVMLTAKL-QHVNLIRVLGFCID-SEERMLIYEYMPNKSLDCYL------FDPIR- 556
+E+ + + H+N++ +LG C M+I E+ +L YL F P +
Sbjct: 113 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 172
Query: 557 ---KLILDWKKRVHIIE---GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDF 610
L D+ H+I + +G+ +L SR IHRDL NILL E KI DF
Sbjct: 173 APEDLYKDFLTLEHLICYSFQVAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDF 229
Query: 611 GMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
G+AR K+ + ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 230 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 459 IEAATERFSIRNK-LGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVML 513
++ T + +R + LG+GG+ Y+ + EV A K + K+ E+ E+ +
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
L + +++ GF D + ++ E +SL RK + + + R + + I
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI- 152
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
QG+ YL +IHRDLK+ N+ L + M KI DFG+A + E + + GT
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 207
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
YI PE K +S + D++S G +L ++ GK
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 459 IEAATERFSIRNK-LGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVML 513
++ T + +R + LG+GG+ Y+ + EV A K + K+ E+ E+ +
Sbjct: 20 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 79
Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
L + +++ GF D + ++ E +SL RK + + + R + + I
Sbjct: 80 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI- 136
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
QG+ YL +IHRDLK+ N+ L + M KI DFG+A + E + + GT
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 191
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
YI PE K +S + D++S G +L ++ GK
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 41/308 (13%)
Query: 452 RVYSLADIEAATER-FSIRNKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTSTQGFE 505
++Y+ D ER ++LG+G +G V P G+ ++AVK+L +
Sbjct: 10 QLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69
Query: 506 EFKNEVMLTAKLQHVNLI---RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
+F+ E+ + L H + I R + + + L+ EY+P+ L +L + LD
Sbjct: 70 DFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDA 126
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
+ + I +G+ YL SR +HRDL NIL+ KI+DFG+A++ L+
Sbjct: 127 SRLLLYSSQICKGMEYLG--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP---LD 180
Query: 623 EN----TEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII---------SGKRLSM 669
++ E I + PE + ++S +SDV+SFGV+L ++ S + L M
Sbjct: 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 240
Query: 670 LCGINENLSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPS 729
+ G ++ L EL + G+ + P E+ LC +P DRPS
Sbjct: 241 M-GCERDVPALSRLLELLEEGQRLP---------APPACPAEVHELMKLCWAPSPQDRPS 290
Query: 730 MLEVSSML 737
+ L
Sbjct: 291 FSALGPQL 298
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 459 IEAATERFSIRNK-LGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVML 513
++ T + +R + LG+GG+ Y+ + EV A K + K+ E+ E+ +
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
L + +++ GF D + ++ E +SL RK + + + R + + I
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI- 152
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
QG+ YL +IHRDLK+ N+ L + M KI DFG+A + E + + GT
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPN 207
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
YI PE K +S + D++S G +L ++ GK
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQGFEE--FKNEVMLT 514
+ E++ +GEG YG V K C G ++A+KK ++ + E+ L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMK----CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
+L+H NL+ +L C + L++E++ + LD P LD++ + I
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIIN 135
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ + ++ IIHRD+K NIL+ ++ K+ DFG AR A E + V T Y
Sbjct: 136 GIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYDDEVATRWY 190
Query: 635 IPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
PE V Y DV++ G L+ ++ G+ L
Sbjct: 191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 459 IEAATERFSIRNK-LGEGGYGPVYKGV-LPCGEVIAVKKLSKT---STQGFEEFKNEVML 513
++ T + +R + LG+GG+ Y+ + EV A K + K+ E+ E+ +
Sbjct: 36 VDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI 95
Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
L + +++ GF D + ++ E +SL RK + + + R + + I
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI- 152
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
QG+ YL +IHRDLK+ N+ L + M KI DFG+A + E + + GT
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKTLCGTPN 207
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
YI PE K +S + D++S G +L ++ GK
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 43/275 (15%)
Query: 491 IAVKKLSKTSTQGFEE-FKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
+AVK L T+ +E +E+ + + L QH N++ +LG C ++I EY L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 549 CYLFDPIRKLI--------------------LDWKKRVHIIEGITQGLLYLQEYSRLTII 588
+L ++ L+ + +H + QG+ +L + I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCI 180
Query: 589 HRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTK 648
HRD+ N+LL KI DFG+AR +S + ++ PE VY+ +
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 649 SDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGVEFVDSFLDDRNSP 706
SDV+S+G+LL +I S G+N IL ++ Y+L K G + +N
Sbjct: 241 SDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK--DGYQMAQPAFAPKN-- 289
Query: 707 CKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNET 741
I C P RP+ ++ S L+ +
Sbjct: 290 -----IYSIMQACWALEPTHRPTFQQICSFLQEQA 319
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 470 NKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI- 523
++LG+G +G V P G+ ++AVK+L + +F+ E+ + L H + I
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 71
Query: 524 --RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
R + + E L+ EY+P+ L +L + LD + + I +G+ YL
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLG- 128
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP----- 636
SR +HRDL NIL+ KI+DFG+A++ + VV G P
Sbjct: 129 -SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPL----DKDXXVVREPGQSPIFWYA 182
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQII---------SGKRLSMLCGINENLSILEHAYELW 687
PE + ++S +SDV+SFGV+L ++ S + L M+ G ++ L EL
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM-GCERDVPALCRLLELL 241
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
+ G+ + P E+ LC +P DRPS + L
Sbjct: 242 EEGQRLP---------APPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 282
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 188 KSSDLWALGCIIYQLVAG 205
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 189 KSSDLWALGCIIYQLVAG 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 195 KSSDLWALGCIIYQLVAG 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 190 KSSDLWALGCIIYQLVAG 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEE--FKNEVMLTAKL 517
+ E + + +G G YG K G+++ K+L S E+ +EV L +L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 518 QHVNLIRVLGFCIDSEERML--IYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
+H N++R ID L + EY L + ++ + ++ +TQ
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER--QYLDEEFVLRVMTQL 120
Query: 576 LLYLQEYSRL-----TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
L L+E R T++HRDLK +N+ L K+ DFG+ARI ++ T VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVG 178
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
T Y+ PE + Y+ KSD++S G LL ++ +
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 191 KSSDLWALGCIIYQLVAG 208
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 463 TERFSIRNKLGEGGYGPVY--KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
++R+ KLG G YG V K L E + +KK S T+T +EV + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGITQGL 576
H N++++ F D L+ E LFD I R+ + V I++ + G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAV-IMKQVLSGT 117
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIG 633
YL +++ I+HRDLK N+LL + KI DFG++ F + ++ +GT
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAY 171
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
YI PE K Y K DV+S GV+L ++ G
Sbjct: 172 YIAPEVLRKK-YDEKCDVWSCGVILYILLCG 201
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 216 KSSDLWALGCIIYQLVAG 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
IIHRDLK NILL E M +I+DFG A++ + ES + VGT Y+ PE T+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 647 TKSDVFSFGVLLLQIISG 664
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 459 IEAATERFSIRNKLGEGGYGPVY--KGVLPCGE--VIAVKKLSKTSTQGFEEFKNEVMLT 514
+ ++R+ KLG G YG V K L E + +KK S T+T +EV +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
+L H N++++ F D L+ E LFD I R+ + V I++ +
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAV-IMKQV 130
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVV 629
G YL +++ I+HRDLK N+LL + KI DFG++ F + ++ +
Sbjct: 131 LSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERL 184
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT YI PE K Y K DV+S GV+L ++ G
Sbjct: 185 GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 218
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 470 NKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI- 523
++LG+G +G V P G+ ++AVK+L + +F+ E+ + L H + I
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 74
Query: 524 --RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
R + + + L+ EY+P+ L +L + LD + + I +G+ YL
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLG- 131
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN----TEQVVGTIGYIPP 637
SR +HRDL NIL+ KI+DFG+A++ L+++ E I + P
Sbjct: 132 -SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWYAP 186
Query: 638 EYATKGVYSTKSDVFSFGVLLLQII---------SGKRLSMLCGINENLSILEHAYELWK 688
E + ++S +SDV+SFGV+L ++ S + L M+ G ++ L EL +
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM-GSERDVPALSRLLELLE 245
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
G+ + P E+ LC +P DRPS + L
Sbjct: 246 EGQRLP---------APPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 461 AATERFSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEE--FKNEVMLTAKL 517
+ E + + +G G YG K G+++ K+L S E+ +EV L +L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 518 QHVNLIRVLGFCIDSEERML--IYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
+H N++R ID L + EY L + ++ + ++ +TQ
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER--QYLDEEFVLRVMTQL 120
Query: 576 LLYLQEYSRL-----TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
L L+E R T++HRDLK +N+ L K+ DFG+ARI ++ + VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT--SFAKAFVG 178
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
T Y+ PE + Y+ KSD++S G LL ++ +
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 466 FSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQGFEE-FKNEVMLTAKLQHV 520
F + LG G + V VL G++ AVK + K + +G E +NE+ + K++H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGITQGLLYL 579
N++ + L+ + + L FD I K K +I + + YL
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 580 QEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
R+ I+HRDLK N+L E K ISDFG++++ K + GT GY+
Sbjct: 137 H---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVA 190
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + YS D +S GV+ ++ G
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 472 LGEGGYGPVYK-GVLPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLG 527
LG+GG+ ++ EV A K + K+ E+ E+ + L H +++ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
F D++ ++ E +SL RK + + + R ++ + I G YL R +
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 142
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYST 647
IHRDLK+ N+ L E ++ KI DFG+A + E + + GT YI PE +K +S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 648 KSDVFSFGVLLLQIISGK 665
+ DV+S G ++ ++ GK
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 472 LGEGGYGPVYK-GVLPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLG 527
LG+GG+ ++ EV A K + K+ E+ E+ + L H +++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
F D++ ++ E +SL RK + + + R ++ + I G YL R +
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 138
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYST 647
IHRDLK+ N+ L E ++ KI DFG+A + E + + GT YI PE +K +S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 648 KSDVFSFGVLLLQIISGK 665
+ DV+S G ++ ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL F+P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 472 LGEGGYGPVYK-GVLPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLG 527
LG+GG+ ++ EV A K + K+ E+ E+ + L H +++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
F D++ ++ E +SL RK + + + R ++ + I G YL R +
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 138
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYST 647
IHRDLK+ N+ L E ++ KI DFG+A + E + + GT YI PE +K +S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 648 KSDVFSFGVLLLQIISGK 665
+ DV+S G ++ ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 470 NKLGEGGYGPVYKGVL-PCGE----VIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI- 523
++LG+G +G V P G+ ++AVK+L + +F+ E+ + L H + I
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 75
Query: 524 --RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
R + + + L+ EY+P+ L +L + LD + + I +G+ YL
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLG- 132
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN----TEQVVGTIGYIPP 637
SR +HRDL NIL+ KI+DFG+A++ L+++ E I + P
Sbjct: 133 -SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWYAP 187
Query: 638 EYATKGVYSTKSDVFSFGVLLLQII---------SGKRLSMLCGINENLSILEHAYELWK 688
E + ++S +SDV+SFGV+L ++ S + L M+ G ++ L EL +
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM-GCERDVPALCRLLELLE 246
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSML 737
G+ + P E+ LC +P DRPS + L
Sbjct: 247 EGQRLP---------APPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 286
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 33/283 (11%)
Query: 466 FSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLS---KTSTQGFEEFKNEVMLTAKLQHVN 521
F I K+G G + VY+ L G +A+KK+ + + E+ L +L H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+I+ I+ E ++ E L ++I +KK+ +I T ++Q
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLS--------RMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 582 YSRLT------IIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
S L ++HRD+K +N+ + K+ D G+ R F+ ++ ++ +VGT Y+
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYM 203
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGVEF 695
PE + Y+ KSD++S G LL ++ + + S G NL Y L K + ++
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYGDKMNL------YSLCKKIEQCDY 255
Query: 696 VDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 738
D + + ++ +C+ +P RP + V + K
Sbjct: 256 PPLPSDHYSEELR-----QLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYA 117
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGK 173
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 31/232 (13%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK----GVLPCGEVI--AVKKL-SKTSTQGFEEFKNEV- 511
E E LG G +G V G+ G I AVK L K + E +E+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL------------- 558
M+T H N++ +LG C S LI+EY L YL K
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 559 -------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFG 611
+L ++ + + +G+ +L+ S +HRDL N+L+ KI DFG
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFG 217
Query: 612 MARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+AR +S + ++ PE +G+Y+ KSDV+S+G+LL +I S
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQ---GFEEFKNEVMLT 514
++R+ + LG+G +G V + C G+ AVK +SK + E EV L
Sbjct: 25 SDRYKGQRVLGKGSFGEV----ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
+L H N++++ F D L+ E L FD I RK + II +
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-ARIIRQV 135
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVV 629
G+ Y+ + I+HRDLK N+LL K +I DFG++ F + + +
Sbjct: 136 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKI 189
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT YI PE G Y K DV+S GV+L ++SG
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 472 LGEGGYGPVYK-GVLPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLG 527
LG+GG+ ++ EV A K + K+ E+ E+ + L H +++ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
F D++ ++ E +SL RK + + + R ++ + I G YL R +
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 160
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYST 647
IHRDLK+ N+ L E ++ KI DFG+A + E + + GT YI PE +K +S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 648 KSDVFSFGVLLLQIISGK 665
+ DV+S G ++ ++ GK
Sbjct: 219 EVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 472 LGEGGYGPVYK-GVLPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLG 527
LG+GG+ ++ EV A K + K+ E+ E+ + L H +++ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
F D++ ++ E +SL RK + + + R ++ + I G YL R +
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 162
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYST 647
IHRDLK+ N+ L E ++ KI DFG+A + E + + GT YI PE +K +S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 648 KSDVFSFGVLLLQIISGK 665
+ DV+S G ++ ++ GK
Sbjct: 221 EVDVWSIGCIMYTLLVGK 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 472 LGEGGYGPVYK-GVLPCGEVIAVKKLSKT---STQGFEEFKNEVMLTAKLQHVNLIRVLG 527
LG+GG+ ++ EV A K + K+ E+ E+ + L H +++ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 528 FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
F D++ ++ E +SL RK + + + R ++ + I G YL R +
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 136
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYST 647
IHRDLK+ N+ L E ++ KI DFG+A + E + + GT YI PE +K +S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 648 KSDVFSFGVLLLQIISGK 665
+ DV+S G ++ ++ GK
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 464 ERFSIR-NKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTST-QGFEEFKNEVMLTAK 516
+RF R LGEG +G V GE +AVK L S + K E+ +
Sbjct: 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN 79
Query: 517 LQHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
L H N+++ G C + LI E++P+ SL YL P K ++ K+++ I +
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICK 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV----- 629
G+ YL SR +HRDL N+L+ + KI DFG+ + ++E + E
Sbjct: 138 GMDYLG--SR-QYVHRDLAARNVLVESEHQVKIGDFGLTK-----AIETDKEXXTVKDDR 189
Query: 630 -GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ + PE + + SDV+SFGV L ++++
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQ---GFEEFKNEVMLT 514
++R+ + LG+G +G V + C G+ AVK +SK + E EV L
Sbjct: 48 SDRYKGQRVLGKGSFGEV----ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 103
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
+L H N++++ F D L+ E L FD I RK + II +
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-ARIIRQV 158
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVV 629
G+ Y+ + I+HRDLK N+LL K +I DFG++ F + + +
Sbjct: 159 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKI 212
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT YI PE G Y K DV+S GV+L ++SG
Sbjct: 213 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 464 ERFSIR-NKLGEGGYGPVYKGVLP-----CGEVIAVKKLSKTST-QGFEEFKNEVMLTAK 516
+RF R LGEG +G V GE +AVK L S + K E+ +
Sbjct: 8 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN 67
Query: 517 LQHVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
L H N+++ G C + LI E++P+ SL YL P K ++ K+++ I +
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICK 125
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV----- 629
G+ YL SR +HRDL N+L+ + KI DFG+ + ++E + E
Sbjct: 126 GMDYLG--SR-QYVHRDLAARNVLVESEHQVKIGDFGLTK-----AIETDKEXXTVKDDR 177
Query: 630 -GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ + PE + + SDV+SFGV L ++++
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQ---GFEEFKNEVMLT 514
++R+ + LG+G +G V + C G+ AVK +SK + E EV L
Sbjct: 49 SDRYKGQRVLGKGSFGEV----ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 104
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
+L H N++++ F D L+ E L FD I RK + II +
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-ARIIRQV 159
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVV 629
G+ Y+ + I+HRDLK N+LL K +I DFG++ F + + +
Sbjct: 160 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKI 213
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT YI PE G Y K DV+S GV+L ++SG
Sbjct: 214 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E +I+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 115/292 (39%), Gaps = 62/292 (21%)
Query: 471 KLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNLI 523
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NLI
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQG 575
R+ G + +M + E P SL D +RK + H + G + +G
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAEG 127
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT---- 631
+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHYVMQEHRK 179
Query: 632 --IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKG 689
+ PE +S SD + FGV L ++ + + E W G
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWIG 221
Query: 690 GKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G + + + + C + + + C P DRP+ + + L
Sbjct: 222 LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I EY +L YL + +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL IHRDL N+L+ E KI+DFG+AR
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 127
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 128 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 62/293 (21%)
Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNL 522
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQ 574
IR+ G + +M + E P SL D +RK + H + G + +
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAE 122
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--- 631
G+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 123 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHXVMQEHR 174
Query: 632 ---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+ PE +S SD + FGV L ++ + + E W
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWI 216
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G G + + + + C + + + C P DRP+ + + L
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G G +G V K +V A+K++ S + + F E+ +++ H N++
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLF--DPIRKLILDWKKRVHIIE---GITQGLLY 578
++ G C++ L+ EY SL L +P L + H + +QG+ Y
Sbjct: 66 KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEP-----LPYYTAAHAMSWCLQCSQGVAY 118
Query: 579 LQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L +IHRDLK N+LL G +K I DFG A ++ + G+ ++
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLK--ICDFGTAC-----DIQTHMTNNKGSAAWM 171
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKR 666
PE YS K DVFS+G++L ++I+ ++
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 125
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
+ + +G G +G V K +V A+K++ S + + F E+ +++ H N++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLF--DPIRKLILDWKKRVHIIE---GITQGLLY 578
++ G C++ L+ EY SL L +P L + H + +QG+ Y
Sbjct: 65 KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEP-----LPYYTAAHAMSWCLQCSQGVAY 117
Query: 579 LQEYSRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L +IHRDLK N+LL G +K I DFG A ++ + G+ ++
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLK--ICDFGTAC-----DIQTHMTNNKGSAAWM 170
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKR 666
PE YS K DVFS+G++L ++I+ ++
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 145
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 205 FSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 147
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEE-FKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 147
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYA 117
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGK 173
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 62/293 (21%)
Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNL 522
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQ 574
IR+ G + +M + E P SL D +RK + H + G + +
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAE 122
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--- 631
G+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 123 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHYVMQEHR 174
Query: 632 ---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+ PE +S SD + FGV L ++ + + E W
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWI 216
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G G + + + + C + + + C P DRP+ + + L
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC------GEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
T+ + + +G+G + V + V C ++I KKLS Q E E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
L+H N++R+ + L+++ + L D + + H I+ I + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 116
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQ-----V 628
L+ + + ++HRDLK N+LL K K++DFG+A +E +Q
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-------IEVQGDQQAWFGF 166
Query: 629 VGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT GY+ PE K Y D+++ GV+L ++ G
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 62/293 (21%)
Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNL 522
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQ 574
IR+ G + +M + E P SL D +RK + H + G + +
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAE 132
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--- 631
G+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 133 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHXVMQEHR 184
Query: 632 ---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+ PE +S SD + FGV L ++ + + E W
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWI 226
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G G + + + + C + + + C P DRP+ + + L
Sbjct: 227 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 131
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQ---GFEEFKNEVMLT 514
++R+ + LG+G +G V + C G+ AVK +SK + E EV L
Sbjct: 31 SDRYKGQRVLGKGSFGEV----ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 86
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
+L H N++++ F D L+ E L FD I RK + II +
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-ARIIRQV 141
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVV 629
G+ Y+ + I+HRDLK N+LL K +I DFG++ F + + +
Sbjct: 142 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKI 195
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT YI PE G Y K DV+S GV+L ++SG
Sbjct: 196 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 62/293 (21%)
Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNL 522
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQ 574
IR+ G + +M + E P SL D +RK + H + G + +
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAE 126
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--- 631
G+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 127 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHYVMQEHR 178
Query: 632 ---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+ PE +S SD + FGV L ++ + + E W
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWI 220
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G G + + + + C + + + C P DRP+ + + L
Sbjct: 221 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 131
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 62/293 (21%)
Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNL 522
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQ 574
IR+ G + +M + E P SL D +RK + H + G + +
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAE 122
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--- 631
G+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 123 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHYVMQEHR 174
Query: 632 ---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+ PE +S SD + FGV L ++ + + E W
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWI 216
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G G + + + + C + + + C P DRP+ + + L
Sbjct: 217 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 45/308 (14%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK--TSTQGFEEFKN 509
L D+ ++F++ LG+G +G V + L + +AVK L ++ EEF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEER------MLIYEYMPNKSLDCYLF------DPIRK 557
E + H ++ +++G + S + M+I +M + L +L +P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN- 133
Query: 558 LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR-IF 616
L + V + I G+ YL S IHRDL N +L E M ++DFG++R I+
Sbjct: 134 --LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+ + + + + ++ E +Y+ SDV++FGV + +I++ + + GI EN
Sbjct: 189 SGDYYRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT-RGQTPYAGI-EN 245
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
I Y GG + + P + ++ C +P RPS +
Sbjct: 246 AEI----YNYLIGGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSF----TC 288
Query: 737 LKNETTNI 744
L+ E NI
Sbjct: 289 LRMELENI 296
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGE-----VIAVKKLSKTSTQGFEEFKNEVMLTAK 516
TE + + +LG+G + V + V + G+ +I KKLS Q E E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
L+H N++R+ + LI++ + L D + + H I+ I + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIG 633
L+ + + ++HR+LK N+LL +K K++DFG+A E ++ GT G
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPG 178
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE K Y D+++ GV+L ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q +K E+ + L
Sbjct: 19 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
H ++I+ G C D E+ L+ EY+P SL YL P + L + + + I +G+
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGM 130
Query: 577 LYL--QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAK-ESLEENTEQVVGTIG 633
YL Q Y IHR+L N+LL KI DFG+A+ + E +
Sbjct: 131 AYLHAQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ PE + + SDV+SFGV L ++++
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFE-EFKNEVMLTA----KLQHVNLIRV 525
+LG G +G V KG +V+ + + + K+E++ A +L + ++R+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+G C ++E ML+ E L+ YL + + D K + ++ ++ G+ YL+E +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEESN-- 137
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGV 644
+HRDL N+LL KISDFG+++ A E+ + + + PE
Sbjct: 138 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 645 YSTKSDVFSFGVLLLQIIS 663
+S+KSDV+SFGVL+ + S
Sbjct: 197 FSSKSDVWSFGVLMWEAFS 215
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKK 564
+E E + +L + ++R++G C ++E ML+ E L+ YL + + D K
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 470
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEE 623
+ ++ ++ G+ YL+E + +HRDL N+LL KISDFG+++ A E+ +
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 624 NTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q +K E+ + L
Sbjct: 19 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
H ++I+ G C D E+ L+ EY+P SL YL P + L + + + I +G+
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGM 130
Query: 577 LYL--QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAK-ESLEENTEQVVGTIG 633
YL Q Y IHR+L N+LL KI DFG+A+ + E +
Sbjct: 131 AYLHSQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ PE + + SDV+SFGV L ++++
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKK 564
+E E + +L + ++R++G C ++E ML+ E L+ YL + + D K
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 471
Query: 565 RVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEE 623
+ ++ ++ G+ YL+E + +HRDL N+LL KISDFG+++ A E+ +
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 624 NTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 62/293 (21%)
Query: 470 NKLGEGGYGPVYKGVL--PCGEVI--AVKKLSK---TSTQGFEEFKNEVMLTAKLQHVNL 522
KLG+G +G V +G P G+ + AVK L + + ++F EV L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--------ITQ 574
IR+ G + +M + E P SL D +RK + H + G + +
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRK------HQGHFLLGTLSRYAVQVAE 132
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT--- 631
G+ YL+ IHRDL N+LL KI DFG+ R +L +N + V
Sbjct: 133 GMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR-----ALPQNDDHYVMQEHR 184
Query: 632 ---IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWK 688
+ PE +S SD + FGV L ++ + + E W
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT------------------YGQEPWI 226
Query: 689 GGKGVEFVDSFLDDRNSPCKLMRCLE----IALLCVQENPNDRPSMLEVSSML 737
G G + + + + C + + + C P DRP+ + + L
Sbjct: 227 GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 441 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYA 497
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 498 YQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGK 553
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 475 GGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE 534
G +G V+K L + +AVK Q ++ + E+ T ++H NL++ I +E+
Sbjct: 26 GRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQF----IAAEK 79
Query: 535 R--------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE----- 581
R LI + SL YL + I+ W + H+ E +++GL YL E
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 582 ---YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
+ +I HRD K N+LL + ++DFG+A F +T VGT Y+ PE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 639 YATKGVYSTKS-----DVFSFGVLLLQIIS 663
+ + D+++ G++L +++S
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E +R + LGEG +G V K +AVK L +T+ + +E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-----------FDPIR-- 556
+ M+ +H N+I +LG C +I EY +L YL ++P
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE +Y+ +SDV+SFGVLL +I +
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQ---GFEEFKNEVMLT 514
++R+ + LG+G +G V + C G+ AVK +SK + E EV L
Sbjct: 25 SDRYKGQRVLGKGSFGEV----ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
+L H N+ ++ F D L+ E L FD I RK + II +
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-ARIIRQV 135
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVV 629
G+ Y + I+HRDLK N+LL K +I DFG++ F + + +
Sbjct: 136 LSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKI 189
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT YI PE G Y K DV+S GV+L ++SG
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I Y +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYA 122
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 123 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 178
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 173
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VGT+ Y+PPE A
Sbjct: 174 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AI 228
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 286
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 287 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 318
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 173
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VGT+ Y+PPE A
Sbjct: 174 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AI 228
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 286
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 287 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 318
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYA 145
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 146 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 201
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
F +++ LGEG YG V P GE++A+KK+ F E+ + +H N+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 524 RVLGFC-IDSEERM----LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
+ DS E +I E M D + + L D HI I Q L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQMLSDD-----HIQYFIYQTLRA 124
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE---------QVV 629
++ +IHRDLK SN+L+ K+ DFG+ARI ES +N+E + V
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMTEXV 183
Query: 630 GTIGYIPPEYA-TKGVYSTKSDVFSFGVLLLQI 661
T Y PE T YS DV+S G +L ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYA 117
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 173
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
F +++ LGEG YG V P GE++A+KK+ F E+ + +H N+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 524 RVLGFC-IDSEERM----LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
+ DS E +I E M D + + L D HI I Q L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQMLSDD-----HIQYFIYQTLRA 124
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE---------QVV 629
++ +IHRDLK SN+L+ K+ DFG+ARI ES +N+E + V
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMVEFV 183
Query: 630 GTIGYIPPEYA-TKGVYSTKSDVFSFGVLLLQI 661
T Y PE T YS DV+S G +L ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYA 117
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 173
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + I +LG+G +G VYK G + A K + S + E++ E+ + A H +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+++LG + ++ E+ P ++D + + R L + ++ ++ Q L L
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVV--CRQMLEALNFL 133
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT- 641
IIHRDLK N+L+ +++DFG++ K + + +GT ++ PE
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMC 191
Query: 642 ----KGVYSTKSDVFSFGVLLLQI 661
Y K+D++S G+ L+++
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
pdb|1JNE|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
Length = 420
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 71/375 (18%)
Query: 49 THLICSSADI---NSTTYQLSLSLPSDENQIAKFADTVKKKNPSITTILSIGQGKDTNY- 104
+HL+ A + N Y ++ +L ++Q ++ ++K+K P + +LS+G D +
Sbjct: 34 SHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVLLSVGGDHDIDPD 92
Query: 105 --SIYSSMVRNSSHRK-SFIDSSIRIARLYGFRGLDFAWTAPNTST-------------- 147
+ Y ++ R+ FI S+ + + YGF GLD A+ P
Sbjct: 93 HPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSI 152
Query: 148 -DMFNIGLLFD------EWRIAATKLDAKNSTRQQSLLI-------LTARFRYSPPANSY 193
+F + D + + A D K+S R L+ + + + + PA +
Sbjct: 153 KKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVNSTWYFDIPALNG 212
Query: 194 LLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARSTDQVLKAWIERGLSA 253
L++ + NL +T + P +++AP GS + D ++ W+ +G +
Sbjct: 213 LVDFV--NLATFDFLTPAR-NPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPS 269
Query: 254 DKLVMCLPFYGYAWTLVKPEDNGI----------GAAAAGPALYDSGLVTYKKIKNHIKT 303
+K+ + + YG AW L K D+G+ G A G GL++Y +I +
Sbjct: 270 NKINLGVATYGNAWKLTK--DSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKLSN 327
Query: 304 YGPDVQVMYNSTYEVNYFSTGT------------------VWFGFDDVEAVRAKIAYAKE 345
P Q + + + S T +W +DD ++ K AYA+
Sbjct: 328 --PQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARV 385
Query: 346 KRLLGYYAWQVSFDD 360
K L G + +S+DD
Sbjct: 386 KNLGGVALFDLSYDD 400
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 441 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYA 497
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 498 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 553
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYA 120
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 121 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 176
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + I +LG+G +G VYK G + A K + S + E++ E+ + A H +
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+++LG + ++ E+ P ++D + + R L + ++ ++ Q L L
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVV--CRQMLEALNFL 125
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT- 641
IIHRDLK N+L+ +++DFG++ K + + +GT ++ PE
Sbjct: 126 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMC 183
Query: 642 ----KGVYSTKSDVFSFGVLLLQI 661
Y K+D++S G+ L+++
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKN 509
S D E ER + +GEG +G V++G+ E +A+K TS E+F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
E + + H ++++++G I +I E L +L +RK LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYA 119
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVV 629
++ L YL+ +HRD+ N+L+ K+ DFG++R + ++S +
Sbjct: 120 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 175
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
I ++ PE +++ SDV+ FGV + +I+
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHVNLI 523
F +++ LGEG YG V P GE++A+KK+ F E+ + +H N+I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 524 RVLGFC-IDSEERM----LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
+ DS E +I E M D + + L D HI I Q L
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQMLSDD-----HIQYFIYQTLRA 124
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE---------QVV 629
++ +IHRDLK SN+L+ K+ DFG+ARI ES +N+E + V
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMTEYV 183
Query: 630 GTIGYIPPEYA-TKGVYSTKSDVFSFGVLLLQI 661
T Y PE T YS DV+S G +L ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVY--------KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNE 510
E ++ ++ LGEG +G V K +AVK L +T+ + +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 511 V-MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL-------------FDPIR 556
+ M+ +H N+I +LG C +I Y +L YL + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ + +K V + +G+ YL + IHRDL N+L+ E KI+DFG+AR
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV------YKGVLPCGEVIAVKKLSKTSTQGFEEFK 508
SLAD A + I LGEG +G V G ++I K L+K+ QG +
Sbjct: 5 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 61
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRV 566
E+ L+H ++I++ +E +++ EY N+ LFD I R + + + R
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEAR- 115
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE 626
+ I + Y R I+HRDLK N+LL E + KI+DFG++ I + + +
Sbjct: 116 RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS- 171
Query: 627 QVVGTIGYIPPEYATKGVYS-TKSDVFSFGVLL 658
G+ Y PE + +Y+ + DV+S GV+L
Sbjct: 172 --CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKL-SKTSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q +K E+ + L
Sbjct: 36 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY 91
Query: 519 HVNLIRVLGFCIDS--EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
H ++I+ G C D+ L+ EY+P SL YL P + L + + + I +G+
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGM 147
Query: 577 LYL--QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAK-ESLEENTEQVVGTIG 633
YL Q Y IHRDL N+LL KI DFG+A+ + E +
Sbjct: 148 AYLHAQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ PE + + SDV+SFGV L ++++
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 471 KLGEGGYGPVYKGVLPCGEV---IAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
+LG G +G V +GV + +A+K L + T EE E + +L + ++R++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +E ML+ E L +L ++ + ++ ++ G+ YL+E +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN--- 130
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGVY 645
+HRDL N+LL KISDFG+++ A +S + + PE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 646 STKSDVFSFGVLLLQIIS 663
S++SDV+S+GV + + +S
Sbjct: 191 SSRSDVWSYGVTMWEALS 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQHVNL 522
+ + +LG+G + V + V + G+ A K ++ K S + ++ + E + L+H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+R+ + LI++ + L D + + H I+ I + +L+ +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ- 139
Query: 583 SRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ ++HRDLK N+LL +K K++DFG+A E ++ GT GY+ PE
Sbjct: 140 --MGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEV 195
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISG 664
K Y D+++ GV+L ++ G
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 71 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 126
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VGT+ Y+PPE A
Sbjct: 127 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AI 181
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 239
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 240 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 271
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV------YKGVLPCGEVIAVKKLSKTSTQGFEEFK 508
SLAD A + I LGEG +G V G ++I K L+K+ QG +
Sbjct: 6 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 62
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRV 566
E+ L+H ++I++ +E +++ EY N+ LFD I R + + + R
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEAR- 116
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE 626
+ I + Y R I+HRDLK N+LL E + KI+DFG++ I + + +
Sbjct: 117 RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS- 172
Query: 627 QVVGTIGYIPPEYATKGVYS-TKSDVFSFGVLL 658
G+ Y PE + +Y+ + DV+S GV+L
Sbjct: 173 --CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGE----VIAVKKLSK-TSTQGFEEFKNEVM 512
D E ER + +GEG +G V++G+ E +A+K TS E+F E +
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
+ H ++++++G I +I E L +L +RK LD + +
Sbjct: 61 TMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQL 117
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
+ L YL+ +HRD+ N+L+ K+ DFG++R + ++S + I
Sbjct: 118 STALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 173
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
++ PE +++ SDV+ FGV + +I+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 450 NLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGV--LPCGE----VIAVKKLSKTSTQG 503
NL +A T+ + + +LG+G + V + V P E +I KKLS Q
Sbjct: 17 NLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK 76
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK 563
E E + L+H N++R+ + L+++ + L D + +
Sbjct: 77 LE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEA 130
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKES 620
H I I + + ++ ++ I+HRDLK N+LL K K++DFG+A
Sbjct: 131 DASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLA------- 180
Query: 621 LEENTEQ-----VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+E EQ GT GY+ PE K Y D+++ GV+L ++ G
Sbjct: 181 IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 19/233 (8%)
Query: 441 AGDFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTS 500
A F R ++ L + + E+ I +G+G +G VY G I + + + +
Sbjct: 11 ARSFPRKASQTSIF-LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDN 69
Query: 501 TQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLIL 560
+ FK EVM + +H N++ +G C+ +I ++L + D K++L
Sbjct: 70 EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA--KIVL 127
Query: 561 DWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGM---ARIFA 617
D K I + I +G+ YL I+H+DLK N+ K I+DFG+ + +
Sbjct: 128 DVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQ 183
Query: 618 KESLEENTEQVVGTIGYIPPEY---------ATKGVYSTKSDVFSFGVLLLQI 661
E+ G + ++ PE K +S SDVF+ G + ++
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 90 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 145
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VGT+ Y+PPE A
Sbjct: 146 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AI 200
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 258
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 259 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 290
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG+G +G VYK V+A K+ T S + E++ E+ + A H N+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII-EGITQGLLYLQEYS 583
+L ++ E+ ++D + + R L + ++ ++ + L YL +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNK 155
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-ENTEQVVGTIGYIPPEY--- 639
IIHRDLK NIL K++DFG++ AK + + + +GT ++ PE
Sbjct: 156 ---IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 640 --ATKGVYSTKSDVFSFGVLLLQI 661
+ Y K+DV+S G+ L+++
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG+G +G VYK V+A K+ T S + E++ E+ + A H N+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII-EGITQGLLYLQEYS 583
+L ++ E+ ++D + + R L + ++ ++ + L YL +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNK 155
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-ENTEQVVGTIGYIPPEY--- 639
IIHRDLK NIL K++DFG++ AK + + + +GT ++ PE
Sbjct: 156 ---IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 640 --ATKGVYSTKSDVFSFGVLLLQI 661
+ Y K+DV+S G+ L+++
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 74 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 129
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VGT+ Y+PPE A
Sbjct: 130 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AI 184
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 242
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 243 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 466 FSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV-MLTAKLQHVNLI 523
F + +G G YG VYKG + G++ A+K + T + EE K E+ ML H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 524 RVLGFCID------SEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
G I ++ L+ E+ S+ L + L + +I I +GL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+L ++ +IHRD+K N+LL E + K+ DFG++ + NT +GT ++ P
Sbjct: 144 HLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMAP 198
Query: 638 EYAT-----KGVYSTKSDVFSFGVLLLQIISG 664
E Y KSD++S G+ +++ G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG+G +G VYK V+A K+ T S + E++ E+ + A H N+++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII-EGITQGLLYLQEYS 583
+L ++ E+ ++D + + R L + ++ ++ + L YL +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNK 155
Query: 584 RLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-ENTEQVVGTIGYIPPEY--- 639
IIHRDLK NIL K++DFG++ AK + + + +GT ++ PE
Sbjct: 156 ---IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 640 --ATKGVYSTKSDVFSFGVLLLQI 661
+ Y K+DV+S G+ L+++
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVY---KGVLP-CGEVIAVKKLSKTSTQGFEEF--KNEVML 513
+A F + LG+G +G V+ K P G + A+K L K + + + K E +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 514 TAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
A + H +++ L + +E ++ LI +++ L F + K ++ ++ V +
Sbjct: 84 LADVNHPFVVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--L 136
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL--EENTEQVVG 630
+ L L L II+RDLK NILL E K++DFG+ +KE++ E+ G
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL----SKEAIDHEKKAYSFCG 192
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T+ Y+ PE + +S +D +S+GVL+ ++++G
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 70 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 125
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VGT+ Y+PPE A
Sbjct: 126 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AI 180
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 238
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 239 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 270
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed
With Octa-N- Acetylchitooctaose (Nag)8
Length = 540
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D AW
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIAWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST 501
+ N+ P+L+ I+ E F + LG+G +G V+ + A+K L K
Sbjct: 3 ELNKERPSLQ------IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV 56
Query: 502 QGFEEFK----NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL-----DCYLF 552
++ + + +L+ +H L + E + EY+ L C+ F
Sbjct: 57 LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF 116
Query: 553 DPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGM 612
D R I GL +L I++RDLK+ NILL + KI+DFGM
Sbjct: 117 DLSRA--------TFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM 165
Query: 613 ARIFAKESL--EENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
KE++ + T + GT YI PE Y+ D +SFGVLL +++ G+
Sbjct: 166 ----CKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a
pdb|1X6L|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a
pdb|1X6N|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a In Complex With Allosamidin
Length = 563
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 259 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 315
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L A+ + + ++A +
Sbjct: 316 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 372
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 373 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 423
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 424 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 483
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 484 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 540
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 541 IDADNGDILNSMNASLGNS 559
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
+ + I +LG G +G V++ G A K + E + E+ + L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+ + D E ++IYE+M L + D K+ D + V + + +GL ++ E
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN 168
Query: 583 SRLTIIHRDLKVSNILL--GEAMKPKISDFGM-ARIFAKESLEENTEQVVGTIGYIPPEY 639
+ +H DLK NI+ + + K+ DFG+ A + K+S++ T GT + PE
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEV 221
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
A +D++S GVL ++SG LS G N++ ++
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSG--LSPFGGENDDETL 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 53/227 (23%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
+G GG+G V+K G+ ++++ + E+ + EV AKL HVN++ G C
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNG-CW 74
Query: 531 DSEERMLIYEYMP---NKSLDCYLFDP---------------IRKLILD------W--KK 564
D ++Y P + SL+ +DP I+ D W K+
Sbjct: 75 DG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 565 R---------VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARI 615
R + + E IT+G+ Y+ +IHRDLK SNI L + + KI DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 616 FAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
+ ++ GT+ Y+ PE + Y + D+++ G++L +++
Sbjct: 186 LKNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K+ + +I Q L + + IIHRD+K +NIL+ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 623 -ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T V+GT Y+ PE A +SDV+S G +L ++++G+
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-----GEVIAVKKLSKTSTQGFEE--FKNEVMLTAK 516
E++ K+GEG YG V+K C G+++A+KK ++ + E+ + +
Sbjct: 3 EKYEKIGKIGEGSYGVVFK----CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ 58
Query: 517 LQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT-QG 575
L+H NL+ +L L++EY + L + D ++ + + H+++ IT Q
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPE-----HLVKSITWQT 111
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L + + IHRD+K NIL+ + K+ DFG AR+ S + E V T Y
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYR 169
Query: 636 PPEYATKGV-YSTKSDVFSFGVLLLQIISG 664
PE Y DV++ G + +++SG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 90 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 145
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A + + VGT+ Y+PPE A
Sbjct: 146 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE-AI 200
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 258
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 259 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 290
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 135/286 (47%), Gaps = 43/286 (15%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHVN-- 521
+SI ++G GG V++ + ++ A+K L + Q + ++NE+ KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+IR+ + I + IY M ++D + +K I W+++ + + + + + + +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQ 173
Query: 582 YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
+ I+H DLK +N L+ + M K+ DFG+A ++ + VG + Y+PPE A
Sbjct: 174 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE-AI 228
Query: 642 KGVYSTKS------------DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELW 687
K + S++ DV+S G +L + GK ++ I++ +I++ +E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-- 286
Query: 688 KGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 733
+EF D D +++C C++ +P R S+ E+
Sbjct: 287 -----IEFPDIPEKDLQD---VLKC------CLKRDPKQRISIPEL 318
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
+ + I +LG G +G V++ G A K + E + E+ + L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+ + D E ++IYE+M L + D K+ D + V + + +GL ++ E
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN 274
Query: 583 SRLTIIHRDLKVSNILL--GEAMKPKISDFGM-ARIFAKESLEENTEQVVGTIGYIPPEY 639
+ +H DLK NI+ + + K+ DFG+ A + K+S++ T GT + PE
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEV 327
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
A +D++S GVL ++SG LS G N++ ++
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSG--LSPFGGENDDETL 365
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitotrio-Thiazoline.
pdb|2WLZ|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitobio-Thiazoline.
pdb|2WM0|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitobio-Thiazoline Thioamide
Length = 548
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L A+ + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRV----L 526
+G GG+G V+K G+ +K++ + E+ + EV AKL HVN++
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWD 74
Query: 527 GFCIDSEER------------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
GF D E + E+ +L+ ++ + R LD + + E IT+
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITK 133
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ Y+ +I+RDLK SNI L + + KI DFG+ + ++ GT+ Y
Sbjct: 134 GVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK---GTLRY 187
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQII 662
+ PE + Y + D+++ G++L +++
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTS---TQGFEEFKNE-VM 512
+I FS+ +G GG+G VY G++ A+K L K QG NE +M
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 513 LT-AKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
L+ I + + + +++ I + M L +L + + R + E
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAE 300
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I L L+ +++RDLK +NILL E +ISD G+A F+K + VG
Sbjct: 301 II----LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----KKPHASVG 352
Query: 631 TIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISG 664
T GY+ PE KGV Y + +D FS G +L +++ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTS---TQGFEEFKNE-VM 512
+I FS+ +G GG+G VY G++ A+K L K QG NE +M
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 513 LT-AKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
L+ I + + + +++ I + M L +L + + R + E
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAE 299
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I L L+ +++RDLK +NILL E +ISD G+A F+K + VG
Sbjct: 300 II----LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----KKPHASVG 351
Query: 631 TIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISG 664
T GY+ PE KGV Y + +D FS G +L +++ G
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQ 518
++R+ + LG GG V+ L +AVK L + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-----LDWKKRVHIIEGIT 573
H ++ V D+ E +P ++ +R ++ + K+ + +I
Sbjct: 71 HPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-ENTEQVVGTI 632
Q L + + IIHRD+K +NI++ K+ DFG+AR A T V+GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE A +SDV+S G +L ++++G+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 475 GGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE 534
G +G V+K L E +AVK Q ++ + EV ++H N+++ +G +E+
Sbjct: 35 GRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIG----AEK 88
Query: 535 R--------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE----- 581
R LI + SL D ++ ++ W + HI E + +GL YL E
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLS----DFLKANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 582 --YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY 639
+ I HRD+K N+LL + I+DFG+A F +T VGT Y+ PE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 640 ATKGVYSTKS-----DVFSFGVLLLQIIS 663
+ + D+++ G++L ++ S
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 466 FSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLI 523
+ ++ +G G V P E +A+K+++ Q +E E+ ++ H N++
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI---------LDWKKRVHIIEGITQ 574
+ +E L+ + + S+ D I+ ++ LD I+ + +
Sbjct: 72 SYYTSFVVKDELWLVMKLLSGGSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE---SLEENTEQVVGT 631
GL YL + + IHRD+K NILLGE +I+DFG++ A + + + VGT
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 632 IGYIPPEY--ATKGVYSTKSDVFSFGVLLLQIISGK---------RLSMLCGINENLSIL 680
++ PE +G Y K+D++SFG+ +++ +G ++ ML N+ S+
Sbjct: 185 PCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL- 242
Query: 681 EHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCL-EIALLCVQENPNDRPSMLEV 733
++ + D+ K + ++ LC+Q++P RP+ E+
Sbjct: 243 ----------------ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQ 518
++R+ + LG GG V+ L +AVK L + + F+ E A L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-----LDWKKRVHIIEGIT 573
H ++ V ++E Y+ + +D +R ++ + K+ + +I
Sbjct: 71 HPAIVAVYATG-EAETPAGPLPYIVMEYVDGVT---LRDIVHTEGPMTPKRAIEVIADAC 126
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-ENTEQVVGTI 632
Q L + + IIHRD+K +NI++ K+ DFG+AR A T V+GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE A +SDV+S G +L ++++G+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitotrio-Thiazoline Dithioamide
Length = 540
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L A+ + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTS---TQGFEEFKNE-VM 512
+I FS+ +G GG+G VY G++ A+K L K QG NE +M
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 513 LT-AKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
L+ I + + + +++ I + M L +L + + R + E
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAE 300
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I L L+ +++RDLK +NILL E +ISD G+A F+K + VG
Sbjct: 301 II----LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----KKPHASVG 352
Query: 631 TIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISG 664
T GY+ PE KGV Y + +D FS G +L +++ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTS---TQGFEEFKNE-VM 512
+I FS+ +G GG+G VY G++ A+K L K QG NE +M
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 513 LT-AKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
L+ I + + + +++ I + M L +L + + R + E
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAE 300
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
I L L+ +++RDLK +NILL E +ISD G+A F+K + VG
Sbjct: 301 II----LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----KKPHASVG 352
Query: 631 TIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISG 664
T GY+ PE KGV Y + +D FS G +L +++ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 466 FSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLI 523
+ ++ +G G V P E +A+K+++ Q +E E+ ++ H N++
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI---------LDWKKRVHIIEGITQ 574
+ +E L+ + + S+ D I+ ++ LD I+ + +
Sbjct: 77 SYYTSFVVKDELWLVMKLLSGGSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKE---SLEENTEQVVGT 631
GL YL + + IHRD+K NILLGE +I+DFG++ A + + + VGT
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 632 IGYIPPEY--ATKGVYSTKSDVFSFGVLLLQIISGK---------RLSMLCGINENLSIL 680
++ PE +G Y K+D++SFG+ +++ +G ++ ML N+ S+
Sbjct: 190 PCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL- 247
Query: 681 EHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIAL-LCVQENPNDRPSMLEV 733
++ + D+ K + + LC+Q++P RP+ E+
Sbjct: 248 ----------------ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQG---FEEFKNEVMLTAKLQ 518
++R+ + LG GG V+ L +AVK L + + F+ E A L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 519 HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI-----LDWKKRVHIIEGIT 573
H ++ V D+ E +P ++ +R ++ + K+ + +I
Sbjct: 88 HPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 143
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-ENTEQVVGTI 632
Q L + + IIHRD+K +NI++ K+ DFG+AR A T V+GT
Sbjct: 144 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE A +SDV+S G +L ++++G+
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 470 NKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFE---EFKNEVMLTAKLQHVNLIRV 525
+ LG G +G V G G +AVK L++ + + + + E+ +H ++I++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+ ++ EY+ L Y+ R LD K+ + + I G+ Y R
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH---RH 135
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVY 645
++HRDLK N+LL M KI+DFG++ + + E G+ Y PE + +Y
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRXSCGSPNYAAPEVISGRLY 192
Query: 646 S-TKSDVFSFGVLLLQIISG 664
+ + D++S GV+L ++ G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q ++ E+ + L
Sbjct: 14 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 69
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
H ++++ G C D E+ L+ EY+P SL YL + + + + + I +G+
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGM 125
Query: 577 LYL--QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAK-ESLEENTEQVVGTIG 633
YL Q Y IHR L N+LL KI DFG+A+ + E +
Sbjct: 126 AYLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 180
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ PE + + SDV+SFGV L ++++
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution
pdb|1LL4|A Chain A, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|B Chain B, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|C Chain C, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|D Chain D, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
Length = 392
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK N ++ T+LSIG T + + RK F D+S+++ + GF G+D W
Sbjct: 80 LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA----NSYLLNSI 198
P + LL R A AK+ ++ LL + SP N L +
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIA-----SPAGPQNYNKLKLAEM 192
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIER 249
+ L+ ++ ++ +F+ + G +S F +T D+ +K +I+
Sbjct: 193 DKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKA 244
Query: 250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGPD 307
G+ A+K+V+ +P YG A+ +GIG + G +++G+ YK + G
Sbjct: 245 GVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GAQ 296
Query: 308 VQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
V + + +Y +D V+ K Y + + G W+ S D
Sbjct: 297 VTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
pdb|1LL7|B Chain B, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK N ++ T+LSIG T + + RK F D+S+++ + GF G+D W
Sbjct: 80 LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA----NSYLLNSI 198
P + LL R A AK+ ++ LL + SP N L +
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIA-----SPAGPQNYNKLKLAEM 192
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIER 249
+ L+ ++ ++ +F+ + G +S F +T D+ +K +I+
Sbjct: 193 DKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKA 244
Query: 250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGPD 307
G+ A+K+V+ +P YG A+ +GIG + G +++G+ YK + G
Sbjct: 245 GVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GAQ 296
Query: 308 VQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
V + + +Y +D V+ K Y + + G W+ S D
Sbjct: 297 VTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 468 IRNKLGEGGYGPVYKGVLPC--------GEVIAVKKLSK-TSTQGFEEFKNEVMLTAKLQ 518
IR+ LGEG +G V L C GE++AVK L + Q ++ E+ + L
Sbjct: 13 IRD-LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 68
Query: 519 HVNLIRVLGFCIDSEER--MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
H ++++ G C D E+ L+ EY+P SL YL + + + + + I +G+
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGM 124
Query: 577 LYL--QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAK-ESLEENTEQVVGTIG 633
YL Q Y IHR L N+LL KI DFG+A+ + E +
Sbjct: 125 AYLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 179
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ PE + + SDV+SFGV L ++++
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG--- 527
LG+G +G V K A+KK+ T + +EVML A L H ++R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 528 ---------FCIDSEERMLI-YEYMPNKSLDCYLFDPIRKLILDWKKRVH--IIEGITQG 575
+ + + I EY N++L +D I L+ ++ + + I +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE------------- 622
L Y+ IIHRDLK NI + E+ KI DFG+A+ + SL+
Sbjct: 129 LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR-SLDILKLDSQNLPGSS 184
Query: 623 ENTEQVVGTIGYIPPEYAT-KGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+N +GT Y+ E G Y+ K D++S G++ ++I M E ++IL+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGM-----ERVNILK 239
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRP 728
+ +EF F D++ K +I L + +PN RP
Sbjct: 240 KLRSV-----SIEFPPDFDDNKMKVEK-----KIIRLLIDHDPNKRP 276
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 623 -ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T V+GT Y+ PE A +SDV+S G +L ++++G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 623 -ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
T V+GT Y+ PE A +SDV+S G +L ++++G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|B Chain B, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|C Chain C, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|D Chain D, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK N ++ T+LSIG T + + RK F D+S+++ + GF G+D W
Sbjct: 80 LKKNNRNLKTLLSIGGW--TYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDINWEY 137
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPA----NSYLLNSI 198
P + LL R A AK+ ++ LL + SP N L +
Sbjct: 138 PEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIA-----SPAGPQNYNKLKLAEM 192
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFARST---------DQVLKAWIER 249
+ L+ ++ ++ +F+ + G +S F +T D+ +K +I+
Sbjct: 193 DKYLD--------FWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKA 244
Query: 250 GLSADKLVMCLPFYGYAWTLVKPEDNGIGAA--AAGPALYDSGLVTYKKIKNHIKTYGPD 307
G+ A+K+V+ +P YG A+ +GIG + G +++G+ YK + G
Sbjct: 245 GVPANKIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GAQ 296
Query: 308 VQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
V + + +Y +D V+ K Y + + G W+ S D
Sbjct: 297 VTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPV------YKGVLPCGEVIAVKKLSKTSTQGFEEFKN 509
LAD A + I LGEG +G V G ++I K L+K+ QG +
Sbjct: 1 LAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIER 57
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVH 567
E+ L+H ++I++ +E +++ EY N+ LFD I R + + + R
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEAR-R 111
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
+ I + Y R I+HRDLK N+LL E + KI+DFG++ I + + +
Sbjct: 112 FFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-- 166
Query: 628 VVGTIGYIPPEYATKGVYS-TKSDVFSFGVLL 658
G+ Y PE + +Y+ + DV+S GV+L
Sbjct: 167 -CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 454 YSLADIEAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSK---TSTQGFEEFKN 509
YSL D F I LG G +G V+ G A+K L K + E +
Sbjct: 3 YSLQD-------FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 55
Query: 510 EVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLF------DPIRKLILDWK 563
E ++ + + H +IR+ G D+++ +I +Y+ L L +P+ K
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY---- 111
Query: 564 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE 623
+ L L+ II+RDLK NILL + KI+DFG A+ + +
Sbjct: 112 --------AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPD 158
Query: 624 NTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T + GT YI PE + Y+ D +SFG+L+ ++++G
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
+++ K+GEG YG V+K E++A+K++ +G E+ L +L+H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R+ ++ L++E+ ++ L Y FD LD + + + +GL +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFLFQLLKGLGFC- 117
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE-- 638
+SR ++HRDLK N+L+ + K++DFG+AR F + E V T+ Y PP+
Sbjct: 118 -HSR-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISGKR 666
+ K +YST D++S G + ++ + R
Sbjct: 174 FGAK-LYSTSIDMWSAGCIFAELANAAR 200
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 461 AATERFSIRNKLGEGGYGPV------YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLT 514
A + I LGEG +G V G ++I K L+K+ QG + E+
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 58
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKRVHIIEGI 572
L+H ++I++ +E +++ EY N+ LFD I R + + + R + I
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEAR-RFFQQI 112
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
+ Y R I+HRDLK N+LL E + KI+DFG++ I + + + G+
Sbjct: 113 ISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSP 166
Query: 633 GYIPPEYATKGVYS-TKSDVFSFGVLL 658
Y PE + +Y+ + DV+S GV+L
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEV 511
S A + +R+ KLGEG YG VYK + E +A+K++ + +G EV
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
L +LQH N+I + + LI+EY N +P + + +I G
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILL-----GEAMKPKISDFGMARIFAKESLEENTE 626
+ +SR +HRDLK N+LL E KI DFG+AR F + + T
Sbjct: 145 VNFC------HSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTH 196
Query: 627 QVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQII 662
+++ T+ Y PPE YST D++S + +++
Sbjct: 197 EII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 471 KLGEGGYGPVYKGVLPCGEV---IAVKKLSK-TSTQGFEEFKNEVMLTAKLQHVNLIRVL 526
+LG G +G V +GV + +A+K L + T EE E + +L + ++R++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 527 GFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT 586
G C +E ML+ E L +L ++ + ++ ++ G+ YL+E +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN--- 456
Query: 587 IIHRDLKVSNILLGEAMKPKISDFGMARIF-AKESLEENTEQVVGTIGYIPPEYATKGVY 645
+HR+L N+LL KISDFG+++ A +S + + PE +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 646 STKSDVFSFGVLLLQIIS 663
S++SDV+S+GV + + +S
Sbjct: 517 SSRSDVWSYGVTMWEALS 534
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 131/302 (43%), Gaps = 40/302 (13%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQG-FEEFKNEVMLTAKLQHVNL 522
++ + ++G+G YG V+ G GE +AVK T F E E+ T ++H N+
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENI 93
Query: 523 IRVLGFCIDSE----ERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY 578
+ + I + LI +Y N SL +D ++ LD K + + GL +
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCH 149
Query: 579 LQE-----YSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE----ENTEQVV 629
L + I HRDLK NIL+ + I+D G+A F ++ E NT V
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--V 207
Query: 630 GTIGYIPPEYATKGVYSTK------SDVFSFGVLLLQIISGKRLSMLCGINENLSILEH- 682
GT Y+PPE + + +D++SFG++L ++ R + GI E + H
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV---ARRCVSGGIVEEYQLPYHD 264
Query: 683 ------AYELWKGGKGVEFVDSFLDDRNSPCKLMRCL-EIALLCVQENPNDRPSMLEVSS 735
+YE + ++ + +R S + +R + ++ C NP R + L V
Sbjct: 265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
Query: 736 ML 737
L
Sbjct: 325 TL 326
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose
Length = 540
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ ++Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYAFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 466 FSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHV 520
+ R+ LG G + V +L +++A+K ++K + +G E +NE+ + K++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGITQGLLYL 579
N++ + LI + + L FD I K + +I + + YL
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 580 QEYSRLTIIHRDLKVSNIL---LGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+ L I+HRDLK N+L L E K ISDFG++++ S+ GT GY+
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVA 186
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + YS D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 470 NKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVM-LTAKLQHVN---LIR 524
++G G G V+K G VIAVK++ ++ + EE K +M L L+ + +++
Sbjct: 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCPYIVQ 88
Query: 525 VLGFCIDSEERMLIYEYMPN--KSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
G I + + + E M + L + PI + IL + I + L YL+E
Sbjct: 89 CFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKE- 142
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY--- 639
+ +IHRD+K SNILL E + K+ DFG++ + ++ + G Y+ PE
Sbjct: 143 -KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERIDP 198
Query: 640 --ATKGVYSTKSDVFSFGVLLLQIISGK 665
TK Y ++DV+S G+ L+++ +G+
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 443 DFNRNVPNLRVYSLADIEAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTST 501
+ N+ P+L+ I+ E F + LG+G +G V+ + A+K L K
Sbjct: 2 ELNKERPSLQ------IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV 55
Query: 502 QGFEEFK----NEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL-----DCYLF 552
++ + + +L+ +H L + E + EY+ L C+ F
Sbjct: 56 LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF 115
Query: 553 DPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGM 612
D R I GL +L I++RDLK+ NILL + KI+DFGM
Sbjct: 116 DLSRA--------TFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM 164
Query: 613 ARIFAKESL--EENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
KE++ + T GT YI PE Y+ D +SFGVLL +++ G+
Sbjct: 165 ----CKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 466 FSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHV 520
+ R+ LG G + V +L +++A+K ++K + +G E +NE+ + K++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGITQGLLYL 579
N++ + LI + + L FD I K + +I + + YL
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 580 QEYSRLTIIHRDLKVSNIL---LGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+ L I+HRDLK N+L L E K ISDFG++++ S+ GT GY+
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVA 186
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + YS D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQVL 61
Query: 519 H-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEGI 572
H N ++GF E + E+M SLD L I + IL K + +I+G+
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGL 120
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++E + VGT
Sbjct: 121 T----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTR 170
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 466 FSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHV 520
+ R+ LG G + V +L +++A+K ++K + +G E +NE+ + K++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGITQGLLYL 579
N++ + LI + + L FD I K + +I + + YL
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 580 QEYSRLTIIHRDLKVSNIL---LGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+ L I+HRDLK N+L L E K ISDFG++++ S+ GT GY+
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVA 186
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + YS D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 472 LGEGGYGPVYKGV---------LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
LG+G + ++KGV L EV+ +K L K E F + +KL H +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+ G C+ +E +L+ E++ SLD YL + + WK + + + + + +L+E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAMHFLEEN 132
Query: 583 SRLTIIHRDLKVSNILL--------GEAMKPKISDFGMA-RIFAKESLEENTEQVVGTIG 633
T+IH ++ NILL G K+SD G++ + K+ L+E I
Sbjct: 133 ---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER-------IP 182
Query: 634 YIPPE-YATKGVYSTKSDVFSFGVLLLQIISG--KRLSML 670
++PPE + +D +SFG L +I SG K LS L
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL 222
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed
With Octa-N- Acetylchitooctaose (Nag)8
Length = 540
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWQ 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGF-EEFKNEVMLTAKLQHVNLIRVLGF 528
+G G YG V + GE +A+KKLS+ ++ F + E++L +QH N+I +L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 529 CIDSEERMLIYEY---MPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+ Y++ MP D I L +K +++ + +GL Y+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGV- 644
++HRDLK N+ + E + KI DFG+AR + E T VV T Y PE +
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV-TRWYRAPEVILSWMH 200
Query: 645 YSTKSDVFSFGVLLLQIISGKRL 667
Y+ D++S G ++ ++++GK L
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTL 223
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPC----GEVIAVKKLSK-TSTQGFEEFKNEVM 512
D + + + + +G GG+ V L C GE++A+K + K T K E+
Sbjct: 4 DYDELLKYYELHETIGTGGFAKV---KLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
L+H ++ ++ + + ++ EY P L Y+ R + + + RV + I
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRV-VFRQI 117
Query: 573 TQGLLYL--QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+ Y+ Q Y+ HRDLK N+L E K K+ DFG+ K + + + + G
Sbjct: 118 VSAVAYVHSQGYA-----HRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCG 171
Query: 631 TIGYIPPEYAT-KGVYSTKSDVFSFGVLLLQIISG 664
++ Y PE K +++DV+S G+LL ++ G
Sbjct: 172 SLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 466 FSIRNKLGEGGYGPVYKGVLP----CGEVIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHV 520
+ R+ LG G + V +L +++A+K ++K + +G E +NE+ + K++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 76
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGITQGLLYL 579
N++ + LI + + L FD I K + +I + + YL
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 580 QEYSRLTIIHRDLKVSNIL---LGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
+ L I+HRDLK N+L L E K ISDFG++++ S+ GT GY+
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVA 186
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + YS D +S GV+ ++ G
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed
With Hexa-n- Acetylchitohexaose (nag)6
Length = 540
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSFDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At
1.55 Angstroms
pdb|1FFQ|A Chain A, Crystal Structure Of Chitinase A Complexed With
Allosamidin
Length = 540
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 21/166 (12%)
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSL---DCYLFDPIRKLIL 560
+++FKNE+ + +++ + G + +E +IYEYM N S+ D Y F +L
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF------VL 140
Query: 561 DWKKR----VHIIEGITQGLLYLQEY--SRLTIIHRDLKVSNILLGEAMKPKISDFGMAR 614
D + +I+ I + +L Y + I HRD+K SNIL+ + + K+SDFG +
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 615 IFAKESLEENTEQVVGTIGYIPPE-YATKGVYS-TKSDVFSFGVLL 658
+ ++ + GT ++PPE ++ + Y+ K D++S G+ L
Sbjct: 201 YMVDKKIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQGFEEF--KNEVML 513
+A +F + LG+G +G V+ G ++ A+K L K + + + K E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 514 TAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
++ H +++ L + +E ++ LI +++ L F + K ++ ++ V +
Sbjct: 80 LVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--L 132
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL--EENTEQVVG 630
+ L L L II+RDLK NILL E K++DFG+ +KES+ E+ G
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCG 188
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T+ Y+ PE + ++ +D +SFGVL+ ++++G
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3
Angstroms Resolution
Length = 540
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWE 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSTETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQGFEEF--KNEVML 513
+A +F + LG+G +G V+ G ++ A+K L K + + + K E +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 514 TAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
++ H +++ L + +E ++ LI +++ L F + K ++ ++ V +
Sbjct: 81 LVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--L 133
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL--EENTEQVVG 630
+ L L L II+RDLK NILL E K++DFG+ +KES+ E+ G
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCG 189
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T+ Y+ PE + ++ +D +SFGVL+ ++++G
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex
With Hexasaccharide
Length = 540
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 45/319 (14%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K+ +P + + SIG ++ + + + R F+ S + + F G+D W
Sbjct: 236 LKQAHPDLKILPSIGGWTLSDPFFF---MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWL 292
Query: 142 APNTSTDMFNIG---------LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANS 192
P N+G LL E R +L + + + ++A +
Sbjct: 293 FPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG---KDKIDK 349
Query: 193 YLLNSIQRNLNWIHAVTASYYEPV-------STNFTAP---PAALYGSISGRFARSTDQV 242
N Q +++ I ++ +Y T AP P Y +++G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------- 400
Query: 243 LKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGI--GAAAAGP--ALYDSGLVTYKKIK 298
+ A + +G+ K+V+ YG WT V N I A GP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 299 NHIKTYGPDVQVMYNSTYEVNYF---STGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQ 355
+ + + Q Y++T E Y STG + FDD +V+AK Y +K+L G ++W+
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 356 VSFDDHDWLLSQAAAQKDS 374
+ D+ D L S A+ +S
Sbjct: 518 IDADNGDILNSMNASLGNS 536
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCG----EVIAVKKLSKTSTQGFEEF--KNEVML 513
+A +F + LG+G +G V+ G ++ A+K L K + + + K E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 514 TAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
++ H +++ L + +E ++ LI +++ L F + K ++ ++ V +
Sbjct: 80 LVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--L 132
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESL--EENTEQVVG 630
+ L L L II+RDLK NILL E K++DFG+ +KES+ E+ G
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCG 188
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T+ Y+ PE + ++ +D +SFGVL+ ++++G
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 46/283 (16%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
LG+G +G V K A+KK+ T + +EVML A L H ++R +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 531 DSEERMLIYEYMPNKSL---------DCYLFDPIRKLILDWKKRVH--IIEGITQGLLYL 579
+ + + KS + L+D I L+ ++ + + I + L Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE-------------ENTE 626
IIHRDLK NI + E+ KI DFG+A+ + SL+ +N
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR-SLDILKLDSQNLPGSSDNLT 188
Query: 627 QVVGTIGYIPPEYAT-KGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYE 685
+GT Y+ E G Y+ K D++S G++ ++I M E ++IL+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGM-----ERVNILKKLRS 243
Query: 686 LWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRP 728
+ +EF F D++ K +I L + +PN RP
Sbjct: 244 V-----SIEFPPDFDDNKMKVEK-----KIIRLLIDHDPNKRP 276
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGE-----VIAVKKLSKTSTQGFEEFKNEVMLT 514
+A ++ F + ++LG G VY+ C + A+K L KT + + E+ +
Sbjct: 49 DALSDFFEVESELGRGATSIVYR----CKQKGTQKPYALKVLKKTVDKKI--VRTEIGVL 102
Query: 515 AKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGIT 573
+L H N+I++ E L+ E + L FD I K + ++ I
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVKQIL 158
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVG 630
+ + YL E I+HRDLK N+L KI+DFG+++I + L + V G
Sbjct: 159 EAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MKTVCG 212
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T GY PE Y + D++S G++ ++ G
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 37/271 (13%)
Query: 466 FSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
F LG G + V+ K L G++ A+K + K+ +NE+ + K++H N++
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI-RKLILDWKKRVHIIEGITQGLLYLQEY 582
+ + L+ + + L FD I + + K +I+ + + YL E
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 583 SRLTIIHRDLKVSNILL---GEAMKPKISDFGMARIFAKESLEEN--TEQVVGTIGYIPP 637
I+HRDLK N+L E K I+DFG+++ +E+N GT GY+ P
Sbjct: 126 G---IVHRDLKPENLLYLTPEENSKIMITDFGLSK------MEQNGIMSTACGTPGYVAP 176
Query: 638 EYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA-YELWKGGKGVEFV 696
E + YS D +S GV+ +LCG E +E K G EF
Sbjct: 177 EVLAQKPYSKAVDCWSIGVI--------TYILLCGYPPFYEETESKLFEKIKEGY-YEFE 227
Query: 697 DSFLDDRNSPCKLMRCLEIALLCVQENPNDR 727
F DD + K C ++++PN+R
Sbjct: 228 SPFWDDISESAKDFIC-----HLLEKDPNER 253
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9P|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9U|A Chain A, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9U|B Chain B, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9V|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|1W9V|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|2A3A|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3A|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3B|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3B|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3C|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3C|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3E|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2A3E|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2IUZ|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|2IUZ|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|3CH9|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CH9|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CHC|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHC|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHD|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHD|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
pdb|3CHF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
Length = 433
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK+N ++ +LSIG T ++ + RK+F +++++ + GF GLD W
Sbjct: 121 LKKQNRNLKVLLSIGGW--TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEY 178
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL----LNSI 198
P + LL E R A A N+ Q LL + SP + L +
Sbjct: 179 PENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVA-----SPAGPDKIKVLHLKDM 233
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKL 256
+ L++ + + Y S+ + A +Y S + +T L + G+ A+K+
Sbjct: 234 DQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 292
Query: 257 VMCLPFYGYAWTLV----KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMY 312
V+ +P YG ++ KP NG+G + ++D + H+ PD+ Y
Sbjct: 293 VLGMPLYGRSFANTDGPGKPY-NGVGQGSWENGVWDYKALPQAGATEHVL---PDIMASY 348
Query: 313 NSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
+Y +T +D+ + K Y K L G W S D
Sbjct: 349 ------SYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 389
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 134
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 135 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 124
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 125 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKK-LSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLG 527
K+G+G +G V+K G+ +A+KK L + +GF E+ + L+H N++ ++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 528 FCIDSEERM--------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
C L++++ + L L + + K L KRV ++ + GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF--AKESLEENTEQVVGTIGYIPP 637
R I+HRD+K +N+L+ K++DFG+AR F AK S V T+ Y PP
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 638 EYAT-KGVYSTKSDVFSFGVLLLQI 661
E + Y D++ G ++ ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 504 FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML--IYEYMPNKSLDCYLFDPIRKLILD 561
E+ E+ + KL H N+++++ D E L ++E + + + P K + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136
Query: 562 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF-AKES 620
+ R + + + +G+ YL Y + IIHRD+K SN+L+GE KI+DFG++ F ++
Sbjct: 137 DQARFYF-QDLIKGIEYLH-YQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 621 LEENTEQVVGTIGYIPPE--YATKGVYSTKS-DVFSFGVLLLQIISGK 665
L NT VGT ++ PE T+ ++S K+ DV++ GV L + G+
Sbjct: 193 LLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G YG V++G L GE +AVK S Q + + E+ T L+H N +LGF
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDN---ILGFIAS 70
Query: 532 -------SEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ---- 580
S + LI Y + SL +D +++ L+ + + GL +L
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 581 -EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKES--LEENTEQVVGTIGYIPP 637
+ I HRD K N+L+ ++ I+D G+A + ++ S L+ VGT Y+ P
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 638 EYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
E + + + +D+++FG++L +I R +++ GI E+
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI---ARRTIVNGIVED 228
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVI-AVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+++ N +G G +G V V + A KK+ K + + FK E+ + L H N+IR
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSR 584
+ D+ + L+ E L + + K + I++ + + Y +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCH---K 124
Query: 585 LTIIHRDLKVSNILL--GEAMKP-KISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
L + HRDLK N L P K+ DFG+A F + VGT Y+ P+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VL 180
Query: 642 KGVYSTKSDVFSFGVLLLQIISG 664
+G+Y + D +S GV++ ++ G
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCG 203
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHV 520
+++ K+GEG YG V+K E++A+K++ +G E+ L +L+H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R+ ++ L++E+ ++ L Y FD LD + + + +GL +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFLFQLLKGLGFC- 117
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE-- 638
+SR ++HRDLK N+L+ + K+++FG+AR F + E V T+ Y PP+
Sbjct: 118 -HSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISGKR 666
+ K +YST D++S G + ++ + R
Sbjct: 174 FGAK-LYSTSIDMWSAGCIFAELANAGR 200
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 472 LGEGGYGPVYKGV---------LPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
LG+G + ++KGV L EV+ +K L K E F + +KL H +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
+ G C +E +L+ E++ SLD YL + + WK + + + + + +L+E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAWAMHFLEEN 132
Query: 583 SRLTIIHRDLKVSNILL--------GEAMKPKISDFGMA-RIFAKESLEENTEQVVGTIG 633
T+IH ++ NILL G K+SD G++ + K+ L+E I
Sbjct: 133 ---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER-------IP 182
Query: 634 YIPPE-YATKGVYSTKSDVFSFGVLLLQIISG--KRLSML 670
++PPE + +D +SFG L +I SG K LS L
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V + G IAVKKLS+ S + E+ L ++H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 521 NLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
N+I +L + EE +Y D +KL D + +I I +GL
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLK 168
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
Y+ IIHRDLK SN+ + E + KI DFG+AR ++ V T Y P
Sbjct: 169 YIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 220
Query: 638 EYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
E + Y+ D++S G ++ ++++G+ L
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
pdb|1WNO|B Chain B, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
Length = 395
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTA 142
+KK+N ++ +LSIG T ++ + RK+F +++++ + GF GLD W
Sbjct: 83 LKKQNRNLKVLLSIGGW--TYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEY 140
Query: 143 PNTSTDMFNIGLLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPANSYL----LNSI 198
P + LL E R A A N+ Q LL + SP + L +
Sbjct: 141 PENDQQANDFVLLLREVRTALDSYSAANAGGQHFLLTVA-----SPAGPDKIKVLHLKDM 195
Query: 199 QRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR--STDQVLKAWIERGLSADKL 256
+ L++ + + Y S+ + A +Y S + +T L + G+ A+K+
Sbjct: 196 DQQLDFWNLMAYDYAGSFSS-LSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 254
Query: 257 VMCLPFYGYAWTLV----KPEDNGIGAAAAGPALYDSGLVTYKKIKNHIKTYGPDVQVMY 312
V+ +P YG ++ KP NG+G + ++D + H+ PD+ Y
Sbjct: 255 VLGMPLYGRSFANTDGPGKPY-NGVGQGSWENGVWDYKALPQAGATEHVL---PDIMASY 310
Query: 313 NSTYEVNYFSTGTVWFGFDDVEAVRAKIAYAKEKRLLGYYAWQVSFD 359
+Y +T +D+ + K Y K L G W S D
Sbjct: 311 ------SYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 351
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G YG V++G GE +AVK S + + + E+ T L+H N +LGF
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN---ILGFIAS 99
Query: 532 -------SEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ---- 580
S + LI Y SL +D ++ LD + I+ I GL +L
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 581 -EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKES--LEENTEQVVGTIGYIPP 637
+ I HRDLK NIL+ + + I+D G+A + ++ + L+ VGT Y+ P
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 638 EYATKGVYS------TKSDVFSFGVLLLQI 661
E + + + D+++FG++L ++
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPCGEVI-AVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+++ N +G G +G V V + A KK+ K + + FK E+ + L H N+IR
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSR 584
+ D+ + L+ E L + K + I++ + + Y +
Sbjct: 88 LYETFEDNTDIYLVMELCTGGEL---FERVVHKRVFRESDAARIMKDVLSAVAYCH---K 141
Query: 585 LTIIHRDLKVSNILL--GEAMKP-KISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
L + HRDLK N L P K+ DFG+A F + VGT Y+ P+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VL 197
Query: 642 KGVYSTKSDVFSFGVLLLQIISG 664
+G+Y + D +S GV++ ++ G
Sbjct: 198 EGLYGPECDEWSAGVMMYVLLCG 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G YG V++G GE +AVK S + + + E+ T L+H N +LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN---ILGFIAS 70
Query: 532 -------SEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ---- 580
S + LI Y SL +D ++ LD + I+ I GL +L
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 581 -EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKES--LEENTEQVVGTIGYIPP 637
+ I HRDLK NIL+ + + I+D G+A + ++ + L+ VGT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 638 EYATKGVYS------TKSDVFSFGVLLLQI 661
E + + + D+++FG++L ++
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 135
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR A E
Sbjct: 136 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----M 186
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 472 LGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCID 531
+G+G YG V++G GE +AVK S + + + E+ T L+H N +LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN---ILGFIAS 70
Query: 532 -------SEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ---- 580
S + LI Y SL +D ++ LD + I+ I GL +L
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 581 -EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKES--LEENTEQVVGTIGYIPP 637
+ I HRDLK NIL+ + + I+D G+A + ++ + L+ VGT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 638 EYATKGVYS------TKSDVFSFGVLLLQI 661
E + + + D+++FG++L ++
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 102 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 148
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 149 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 199
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 124
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 125 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGF-EEFKNEVMLTAKLQHVNLIRVLGF 528
+G G YG V + GE +A+KKLS+ ++ F + E++L +QH N+I +L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 529 CIDSEERMLIYEY---MPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRL 585
+ Y++ MP D I + +K +++ + +GL Y+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 586 TIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGV- 644
++HRDLK N+ + E + KI DFG+AR + E T VV T Y PE +
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV-TRWYRAPEVILSWMH 218
Query: 645 YSTKSDVFSFGVLLLQIISGKRL 667
Y+ D++S G ++ ++++GK L
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTL 241
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 135
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR A E
Sbjct: 136 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----M 186
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 135
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR A E
Sbjct: 136 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----M 186
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 472 LGE-GGYGPVYKGVLPCGEVIAVKKLSKT-STQGFEEFKNEVMLTAKLQHVNLIRVLGFC 529
+GE G +G VYK V+A K+ T S + E++ E+ + A H N++++L
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 530 IDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII-EGITQGLLYLQEYSRLTII 588
++ E+ ++D + + R L + ++ ++ + L YL + II
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDNK---II 130
Query: 589 HRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEY-----ATKG 643
HRDLK NIL K++DFG++ + ++ + +GT ++ PE +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR-DSFIGTPYWMAPEVVMCETSKDR 189
Query: 644 VYSTKSDVFSFGVLLLQI 661
Y K+DV+S G+ L+++
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKN-----EV 511
D+++ +R+ + LGEG + VYK +++A+KK+ ++ N E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
L +L H N+I +L L++++M L+ + D L+L +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKD--NSLVLTPSHIKAYMLM 120
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
QGL YL ++ I+HRDLK +N+LL E K++DFG+A+ F + QVV T
Sbjct: 121 TLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV-T 175
Query: 632 IGYIPPEYATKG-VYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYE 685
Y PE +Y D+++ G +L +++ R+ L G + +L L +E
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLL--RVPFLPG-DSDLDQLTRIFE 227
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ +GEG YG V + +A+KK+S Q + + E+ + + +H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + S + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA 163
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+L+ KI DFG+ARI E + V T Y PE
Sbjct: 164 N---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEV 511
+AD+ R + +G+G + V + +L G+ +AVK + KT ++ ++ EV
Sbjct: 1 MADLHIGNYR--LLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREV 57
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
+ L H N++++ I++E+ + L+ EY + YL + W K
Sbjct: 58 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL------VAHGWMKEKEARA 110
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
Q + +Q + I+HRDLK N+LL M KI+DFG + F + + G
Sbjct: 111 KFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCG 167
Query: 631 TIGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
+ Y PE + K + DV+S GV+L ++SG
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKK-LSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLG 527
K+G+G +G V+K G+ +A+KK L + +GF E+ + L+H N++ ++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 528 FCIDSEERM--------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
C L++++ + L L + + K L KRV ++ + GL Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF--AKESLEENTEQVVGTIGYIPP 637
R I+HRD+K +N+L+ K++DFG+AR F AK S V T+ Y PP
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 638 EYAT-KGVYSTKSDVFSFGVLLLQI 661
E + Y D++ G ++ ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 101 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 147
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 148 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 198
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 102 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 148
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 149 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 199
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKK-LSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLG 527
K+G+G +G V+K G+ +A+KK L + +GF E+ + L+H N++ ++
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 528 FCIDSEERM--------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
C L++++ + L L + + K L KRV ++ + GL Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 140
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF--AKESLEENTEQVVGTIGYIPP 637
R I+HRD+K +N+L+ K++DFG+AR F AK S V T+ Y PP
Sbjct: 141 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 638 EYAT-KGVYSTKSDVFSFGVLLLQI 661
E + Y D++ G ++ ++
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLSK S + E+ L ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 94 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 140
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 141 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 191
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ +G+ +L S IHRDL NILL E KI DFG+AR K
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ ++ PE +YSTKSDV+S+GVLL +I S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKK-LSKTSTQGFE-EFKNEVMLTAKLQHVNLIRVLG 527
K+G+G +G V+K G+ +A+KK L + +GF E+ + L+H N++ ++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 528 FCIDSEERM--------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
C L++++ + L L + + K L KRV ++ + GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF--AKESLEENTEQVVGTIGYIPP 637
R I+HRD+K +N+L+ K++DFG+AR F AK S V T+ Y PP
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 638 EYAT-KGVYSTKSDVFSFGVLLLQI 661
E + Y D++ G ++ ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQV 57
Query: 518 QH-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEG 571
H N ++GF E + E+M SLD L I + IL K + +I+G
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 117 LT----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQH 519
T+ + + +LG+G + V + + +P G+ A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
N++R+ + L+++ + L D + + H I+ I + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQ-----VVGT 631
I+HRDLK N+LL K K++DFG+A +E +Q GT
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA-------IEVQGDQQAWFGFAGT 169
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GY+ PE K Y D+++ GV+L ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 92 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 138
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 139 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 189
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 133
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 134 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 184
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 152 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQV 57
Query: 518 QH-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEG 571
H N ++GF E + E+M SLD L I + IL K + +I+G
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL-GKVSIAVIKG 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 117 LT----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPIR-----------KLILDWKKR 565
N+I +L + P +SL D YL + KL D +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQ- 124
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 125 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 134
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 135 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK----GVLPCGEVIAVKKLSKTS----TQGFEEFKNEV 511
+ E F + LG G YG V+ G++ A+K L K + + E + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
+ ++ + L + +E ++ LI +Y+ L +L R+ + + ++++ E
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGE 167
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
+ L L+ +L II+RD+K+ NILL ++DFG+++ F + E + G
Sbjct: 168 IV----LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCG 222
Query: 631 TIGYIPPEYATKG--VYSTKSDVFSFGVLLLQIISG 664
TI Y+ P+ G + D +S GVL+ ++++G
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQV 57
Query: 518 QH-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEG 571
H N ++GF E + E+M SLD L I + IL K + +I+G
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL-GKVSIAVIKG 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 117 LT----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFK-NEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQV 57
Query: 518 QH-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEG 571
H N ++GF E + E+M SLD L I + IL K + +I+G
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 117 LT----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 459 IEAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKL 517
+E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQV 57
Query: 518 QH-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEG 571
H N ++GF E + E+M SLD L I + IL K + +I+G
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG 116
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 117 LT----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 164 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 150 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 141 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 133
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 134 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 184
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 466 FSIRNKLGEGGYGPV-----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
+ IR LGEG +G V YK ++L K S + E+ L+H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHP 69
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--ITQGLLY 578
++I++ + +++ EY + LFD I + KKR+ EG Q ++
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGE-----LFDYIVE-----KKRMTEDEGRRFFQQIIC 119
Query: 579 LQEY-SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
EY R I+HRDLK N+LL + + KI+DFG++ I + + + G+ Y P
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAP 176
Query: 638 EYATKGVYS-TKSDVFSFGVLLLQIISGK 665
E +Y+ + DV+S G++L ++ G+
Sbjct: 177 EVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 105 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 151
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 152 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 202
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 130
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 131 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 181
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 89 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 135
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 136 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 186
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 133
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 134 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 184
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 463 TERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLS--KTSTQGFEEFKNEVMLTAKLQH 519
T+ + + +LG+G + V + + +P G+ A K ++ K S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 520 VNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
N++R+ + L+++ + L D + + H I+ I + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 580 QEYSRLTIIHRDLKVSNILLGEAMKP---KISDFGMARIFAKESLEENTEQVVGTIGYIP 636
I+HRDLK N+LL K K++DFG+A + ++ GT GY+
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLS 174
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE K Y D+++ GV+L ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 456 LADIEAATE---RFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEV 511
L D AA E ++ ++ +G G V + V G AVK + T+ + E EV
Sbjct: 83 LPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEV 142
Query: 512 MLTAKLQHVNLIRVLGF-----CIDSEER----MLIYEYMPNKSLDCYLFDPIRKLILDW 562
+ + L +V G IDS E L+++ M L YL + K+ L
Sbjct: 143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSE 199
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA-RIFAKESL 621
K+ I+ + + + +L + I+HRDLK NILL + M+ ++SDFG + + E L
Sbjct: 200 KETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL 256
Query: 622 EENTEQVVGTIGYIPPEY------ATKGVYSTKSDVFSFGVLLLQIISG 664
E + GT GY+ PE T Y + D+++ GV+L +++G
Sbjct: 257 RE----LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQVL 120
Query: 519 H-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEGI 572
H N ++GF E + E+M SLD L I + IL K + +I+G+
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL-GKVSIAVIKGL 179
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 180 T----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTR 229
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 87 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 133
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 134 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 184
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 80 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 126
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 127 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 177
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 130
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 131 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 181
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 81 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 127
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 128 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 178
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 78 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 124
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 125 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 175
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 79 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 125
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 126 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 176
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQVL 77
Query: 519 H-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDPIR--KLILDWKKRVHIIEGI 572
H N ++GF E + E+M SLD L R + IL K + +I+G+
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGL 136
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 137 T----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTR 186
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 79 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 125
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 126 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 176
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 94 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 140
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 141 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 191
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 94 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 140
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 141 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 191
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 134
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 135 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 185
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 130
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 131 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 181
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ + L+ ++ L + + I +GL Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 164 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 93 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 139
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 140 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEM 190
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKTSTQ--GFEEFK 508
+ S D + + ++ +G+G + V + VL G +AVK + KT ++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQKLF 62
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
EV + L H N++++ I++E+ + L+ EY + YL R + K+
Sbjct: 63 REVRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARA 118
Query: 568 IIEGITQGLLYL-QEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE 626
I + Y Q+Y I+HRDLK N+LL M KI+DFG + F ++ +
Sbjct: 119 KFRQIVSAVQYCHQKY----IVHRDLKAENLLLDGDMNIKIADFGFSNEF---TVGNKLD 171
Query: 627 QVVGTIGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
G+ Y PE + K + DV+S GV+L ++SG
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN--TEQVV 629
I GL +LQ II+RDLK+ N++L KI+DFGM KE++ + T+
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM----CKENIWDGVTTKXFC 503
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN---LSILEH 682
GT YI PE Y D ++FGVLL ++++G+ + G +E+ SI+EH
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELFQSIMEH 557
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 102 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 148
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 149 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 199
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + +H N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 93 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 139
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 140 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 190
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 84 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 130
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 131 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEM 181
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 88 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 134
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 135 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEM 185
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEVM 512
AD + + + +G+G + V + +L G+ +AVK + KT ++ ++ EV
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 513 LTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ L H N++++ I++E+ + L+ EY + YL R + K+
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQ 121
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I + Y + I+HRDLK N+LL M KI+DFG + F + + G+
Sbjct: 122 IVSAVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGS 175
Query: 632 IGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
Y PE + K + DV+S GV+L ++SG
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + + +H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 101 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 147
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 148 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 198
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A++K+S Q + + E+ + + +H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEVM 512
AD + + + +G+G + V + +L G+ +AV+ + KT ++ ++ EV
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 513 LTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ L H N++++ I++E+ + L+ EY + YL R + K+
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQ 121
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I + Y + I+HRDLK N+LL M KI+DFG + F + ++ G+
Sbjct: 122 IVSAVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDEFCGS 175
Query: 632 IGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
Y PE + K + DV+S GV+L ++SG
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 105 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 151
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+AR ++
Sbjct: 152 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEM 202
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK-GVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 518
E + F ++LG G G V+K P G V+A +KL + +N+++ ++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIK--PAIRNQIIRELQVL 85
Query: 519 H-VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDP--IRKLILDWKKRVHIIEGI 572
H N ++GF E + E+M SLD L I + IL K + +I+G+
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL-GKVSIAVIKGL 144
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
T YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT
Sbjct: 145 T----YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTR 194
Query: 633 GYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ PE YS +SD++S G+ L+++ G+
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEVM 512
AD + + + +G+G + V + +L G+ +AVK + KT ++ ++ EV
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 513 LTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ L H N++++ I++E+ + L+ EY + YL R + K+
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQ 121
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I + Y + I+HRDLK N+LL M KI+DFG + F + + G+
Sbjct: 122 IVSAVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGS 175
Query: 632 IGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
Y PE + K + DV+S GV+L ++SG
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 74/316 (23%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 59
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E M +P++ L +R
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERM----------EPVQDLFDFITERG 109
Query: 567 HIIEGITQGLLY-----LQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFA 617
+ E + + + ++ ++HRD+K NIL+ GE K+ DFG +
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL- 165
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINEN 676
K+++ + + GT Y PPE+ Y +S V+S G+LL M+CG
Sbjct: 166 KDTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP- 213
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS- 735
EH E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 214 ---FEHDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNH 259
Query: 736 ------MLKNETTNIN 745
+L ET I+
Sbjct: 260 PWMQDVLLPQETAEIH 275
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGF-EEFKNEVMLTAKLQHVNL 522
R++ + +GEG YG V +V +A+KK+S Q + + E+ + +H N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + Y+ ++ L+ ++ L + + I +GL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 583 SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN-TEQVVGTIGYIPPEYAT 641
+ ++HRDLK SN+LL KI DFG+AR+ + + V T Y PE
Sbjct: 146 N---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 642 KGVYSTKS-DVFSFGVLLLQIISGK 665
TKS D++S G +L +++S +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN--TEQVV 629
I GL +LQ II+RDLK+ N++L KI+DFGM KE++ + T+
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM----CKENIWDGVTTKXFC 182
Query: 630 GTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN---LSILEH 682
GT YI PE Y D ++FGVLL ++++G+ + G +E+ SI+EH
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELFQSIMEH 236
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 256
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 257 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 311
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 312 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 242
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 243 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 297
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 298 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 340
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 466 FSIRNKLGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIR 524
+ I +LG G +G V++ V G V K ++ KNE+ + +L H LI
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 525 VLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWK----KRVHIIEGITQGLLYLQ 580
+ D E +LI E++ LFD R D+K + ++ + +GL ++
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGE----LFD--RIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 581 EYSRLTIIHRDLKVSNILL--GEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
E+S I+H D+K NI+ +A KI DFG+A K + +E + T + PE
Sbjct: 167 EHS---IVHLDIKPENIMCETKKASSVKIIDFGLA---TKLNPDEIVKVTTATAEFAAPE 220
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ +D+++ GVL ++SG LS G ++L L+
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSG--LSPFAG-EDDLETLQ 260
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 32/260 (12%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFE---EFKNEVMLTAKLQHV 520
+ + + LG G +G V G G +AVK L++ + + + K E+ +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--ITQGLLY 578
++I++ + ++ EY+ L FD I K RV +E + Q +L
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGEL----FDYICK-----HGRVEEMEARRLFQQILS 122
Query: 579 LQEY-SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+Y R ++HRDLK N+LL M KI+DFG++ + + ++ G+ Y P
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAP 179
Query: 638 EYATKGVYS-TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGK-GVEF 695
E + +Y+ + D++S GV+L ++LCG EH L+K + GV +
Sbjct: 180 EVISGRLYAGPEVDIWSCGVIL--------YALLCGTLPFDD--EHVPTLFKKIRGGVFY 229
Query: 696 VDSFLDDRNSPCKLMRCLEI 715
+ +L +R+ LM L++
Sbjct: 230 IPEYL-NRSVATLLMHMLQV 248
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEVM 512
AD + + + +G+G + V + +L G+ +AVK + KT ++ ++ EV
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 513 LTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ L H N++++ I++E+ + L+ EY + YL R + K+
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQ 121
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I + Y + I+HRDLK N+LL M KI+DFG + F + + G
Sbjct: 122 IVSAVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDAFCGA 175
Query: 632 IGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
Y PE + K + DV+S GV+L ++SG
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 45/254 (17%)
Query: 470 NKLGEGGYGPV--YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLG 527
KLGEGG+ V +G L G A+K++ Q EE + E + H N++R++
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 528 FCIDS----EERMLIYEYMPNKSLDCYLFDPIRKL-----ILDWKKRVHIIEGITQGL-- 576
+C+ E L+ + +L ++ I +L L + + ++ GI +GL
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTL----WNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFG---MARIFAKESLEENTEQVVG--- 630
++ + Y+ HRDLK +NILLG+ +P + D G A I + S + T Q
Sbjct: 150 IHAKGYA-----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 631 -TIGYIPPEY---ATKGVYSTKSDVFSFGVLLLQIISG---------KRLSMLCGINENL 677
TI Y PE + V ++DV+S G +L ++ G K S+ + L
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264
Query: 678 SILE---HAYELWK 688
SI + H+ LW+
Sbjct: 265 SIPQSPRHSSALWQ 278
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 43/310 (13%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVM 512
E R S LG G +G V + +AVK L ++ E +E+
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 513 LTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL--------DCYLFDPIRKLILDWK 563
+ + L H+N++ +LG C ++I EY L D ++ I++
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 564 KRVHIIEG-------ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ +E + +G+ +L + IHRDL NILL KI DFG+AR
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDI 195
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+S + ++ PE VY+ +SDV+S+G+ L ++ S+
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-----FSLGSSPYPG 250
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ + Y++ K G L ++P ++ +I C +P RP+ ++ +
Sbjct: 251 MPVDSKFYKMIKEGF------RMLSPEHAPAEM---YDIMKTCWDADPLKRPTFKQIVQL 301
Query: 737 LK---NETTN 743
++ +E+TN
Sbjct: 302 IEKQISESTN 311
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure Of Mutant
W275g
pdb|3ART|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Dequalinium
pdb|3ARU|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Pentoxifylline
pdb|3AS0|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Sanguinarine
pdb|3AS1|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Chelerythrine
pdb|3AS2|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Propentofylline
pdb|3AS3|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With 2-(Imidazolin-
2-Yl)-5-Isothiocyanatobenzofuran
Length = 584
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 66/335 (19%)
Query: 83 VKKKNPSITTILSIGQG--KDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFA 139
+K++NP + I SIG G D Y + +R +F+ S + + + F G+D
Sbjct: 238 LKQRNPDLKIIPSIGGGTLSDPFYDFV-----DKKNRDTFVASVKKFLKTWKFYDGVDID 292
Query: 140 WTAPNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPP 189
W P D N G L E R+ +L+A+ T + L Y
Sbjct: 293 WEFPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKI 350
Query: 190 ANSYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR------------ 237
+ +++Q +++I A+T +Y + N ALY G F R
Sbjct: 351 EDVDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDEN 405
Query: 238 ---------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA 282
+ D ++ + +G+ A+KLV+ YG W TL P D G A
Sbjct: 406 GEPYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATG 465
Query: 283 ------GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFG 329
+++ G++ YK IK+ + T + Y++ E + STG +
Sbjct: 466 KLKGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-IT 524
Query: 330 FDDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
FDD +V AK YAK L G ++W++ D+ D L
Sbjct: 525 FDDHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI D+G+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 43/310 (13%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVM 512
E R S LG G +G V + +AVK L ++ E +E+
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 513 LTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL--------DCYLFDPIRKLILDWK 563
+ + L H+N++ +LG C ++I EY L D ++ I++
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 564 KRVHIIEG-------ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ +E + +G+ +L + IHRDL NILL KI DFG+AR
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHI 218
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+S + ++ PE VY+ +SDV+S+G+ L ++ S+
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-----FSLGSSPYPG 273
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ + Y++ K G L ++P ++ +I C +P RP+ ++ +
Sbjct: 274 MPVDSKFYKMIKEG------FRMLSPEHAPAEM---YDIMKTCWDADPLKRPTFKQIVQL 324
Query: 737 LK---NETTN 743
++ +E+TN
Sbjct: 325 IEKQISESTN 334
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ +G+ +L + IHRDL NILL E KI DFG+AR K+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
E + F ++LG G G V K +I +KL + +N+++ ++ H
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK--PAIRNQIIRELQVLH 69
Query: 520 -VNLIRVLGF---CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
N ++GF E + E+M SLD L + +++ + +V I + +G
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSI--AVLRG 126
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L YL+E + I+HRD+K SNIL+ + K+ DFG++ + ++ VGT Y+
Sbjct: 127 LAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYM 180
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
PE YS +SD++S G+ L+++ G+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 43/310 (13%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVM 512
E R S LG G +G V + +AVK L ++ E +E+
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 513 LTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL--------DCYLFDPIRKLILDWK 563
+ + L H+N++ +LG C ++I EY L D ++ I++
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 564 KRVHIIEG-------ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ +E + +G+ +L + IHRDL NILL KI DFG+AR
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 218
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+S + ++ PE VY+ +SDV+S+G+ L ++ S+
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-----FSLGSSPYPG 273
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ + Y++ K G L ++P ++ +I C +P RP+ ++ +
Sbjct: 274 MPVDSKFYKMIKEGF------RMLSPEHAPAEM---YDIMKTCWDADPLKRPTFKQIVQL 324
Query: 737 LK---NETTN 743
++ +E+TN
Sbjct: 325 IEKQISESTN 334
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ +G+ +L SR IHRDL NILL E KI DFG+AR K+
Sbjct: 202 VAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ +G+ +L SR IHRDL NILL E KI DFG+AR K+
Sbjct: 200 VAKGMEFLA--SR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
+ +G+ +L + IHRDL NILL E KI DFG+AR K+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIIS 663
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 75
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 134
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 135 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 186
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 187 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 231
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 232 HDEEIIRG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 281 VLLPQETAEIH 291
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 43/310 (13%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVL------PCGEVIAVKKLSKTS-TQGFEEFKNEVM 512
E R S LG G +G V + +AVK L ++ E +E+
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 513 LTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL--------DCYLFDPIRKLILDWK 563
+ + L H+N++ +LG C ++I EY L D ++ I++
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 564 KRVHIIEG-------ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ +E + +G+ +L + IHRDL NILL KI DFG+AR
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 211
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+S + ++ PE VY+ +SDV+S+G+ L ++ S+
Sbjct: 212 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-----FSLGSSPYPG 266
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ + Y++ K G L ++P ++ +I C +P RP+ ++ +
Sbjct: 267 MPVDSKFYKMIKEGF------RMLSPEHAPAEM---YDIMKTCWDADPLKRPTFKQIVQL 317
Query: 737 LK---NETTN 743
++ +E+TN
Sbjct: 318 IEKQISESTN 327
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEVM 512
AD + + + +G+G + V + +L G+ +AV+ + KT ++ ++ EV
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 513 LTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ L H N++++ I++E+ + L+ EY + YL R + K+
Sbjct: 66 IMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQ 121
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I + Y + I+HRDLK N+LL M KI+DFG + F + + G+
Sbjct: 122 IVSAVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGS 175
Query: 632 IGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
Y PE + K + DV+S GV+L ++SG
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 74
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 133
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 134 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 185
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 186 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 230
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 231 HDEEIIRG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 280 VLLPQETAEIH 290
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 43/310 (13%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK----GVLP--CGEVIAVKKLSKTS-TQGFEEFKNEVM 512
E R S LG G +G V + G++ +AVK L ++ E +E+
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 513 LTAKL-QHVNLIRVLGFCIDSEERMLIYEYMPNKSL--------DCYLFDPIRKLILDWK 563
+ + L H+N++ +LG C ++I EY L D ++ I++
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 564 KRVHIIEG-------ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ +E + +G+ +L + IHRDL NILL KI DFG+AR
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI 213
Query: 617 AKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
+S + ++ PE VY+ +SDV+S+G+ L ++ S+
Sbjct: 214 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL-----FSLGSSPYPG 268
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSM 736
+ + Y++ K G L ++P ++ +I C +P RP+ ++ +
Sbjct: 269 MPVDSKFYKMIKEGF------RMLSPEHAPAEM---YDIMKTCWDADPLKRPTFKQIVQL 319
Query: 737 LK---NETTN 743
++ +E+TN
Sbjct: 320 IEKQISESTN 329
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 453 VYSLADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKTSTQ--GFEEFK 508
+ S AD + + + +G+G + V + +L G +A+K + KT ++
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLF 62
Query: 509 NEVMLTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
EV + L H N++++ I++E+ + LI EY + YL R + K+
Sbjct: 63 REVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARS 118
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
I + Y + I+HRDLK N+LL M KI+DFG + F ++ +
Sbjct: 119 KFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDA 172
Query: 628 VVGTIGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
G Y PE + K + DV+S GV+L ++SG
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 116
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 117 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 171
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 172 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I+ GL +L + II+RDLK+ N++L KI+DFGM + + + T + GT
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGT 183
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN---LSILEH 682
YI PE Y D +++GVLL ++++G+ G +E+ SI+EH
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ--PPFDGEDEDELFQSIMEH 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 32/260 (12%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFE---EFKNEVMLTAKLQHV 520
+ + + LG G +G V G G +AVK L++ + + + K E+ +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG--ITQGLLY 578
++I++ + ++ EY+ L FD I K RV +E + Q +L
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGEL----FDYICK-----HGRVEEMEARRLFQQILS 122
Query: 579 LQEY-SRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
+Y R ++HRDLK N+LL M KI+DFG++ + + + G+ Y P
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAP 179
Query: 638 EYATKGVYS-TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGK-GVEF 695
E + +Y+ + D++S GV+L ++LCG EH L+K + GV +
Sbjct: 180 EVISGRLYAGPEVDIWSCGVIL--------YALLCGTLPFDD--EHVPTLFKKIRGGVFY 229
Query: 696 VDSFLDDRNSPCKLMRCLEI 715
+ +L +R+ LM L++
Sbjct: 230 IPEYL-NRSVATLLMHMLQV 248
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 102
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 161
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 162 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 213
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 214 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 258
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 259 HDEEIIRG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 308 VLLPQETAEIH 318
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 117
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 118 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 117
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 118 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 215
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 107
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 166
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 167 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 218
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 219 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 263
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 264 HDEEIIRG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 313 VLLPQETAEIH 323
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 117
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 118 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 489 EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
+++ V K + + E+ K E + L+H +++ +L +++E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 113
Query: 549 CYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG--EA 602
F+ +++ + H + I + L Y + + IIHRD+K N+LL E
Sbjct: 114 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKEN 168
Query: 603 MKP-KISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQI 661
P K+ DFG+A + L VGT ++ PE + Y DV+ GV+L +
Sbjct: 169 SAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
Query: 662 ISG 664
+SG
Sbjct: 227 LSG 229
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 74
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 133
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 134 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 185
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 186 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 230
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 231 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 280 VLLPQETAEIH 290
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 464 ERFSIRNKLGEGGYGPVYK----GVLPCGEVIAVKKLSKT----STQGFEEFKNEVMLTA 515
E F + LG+GGYG V++ G++ A+K L K + + K E +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
+++H ++ ++ + LI EY+ L L R+ I + I+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMA 133
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN--TEQVVGTIG 633
L +L + II+RDLK NI+L K++DFG+ KES+ + T GTI
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL----CKESIHDGTVTHXFCGTIE 186
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE + ++ D +S G L+ +++G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 75
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 134
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 135 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 186
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 187 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 231
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 232 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 281 VLLPQETAEIH 291
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 59
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 118
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 119 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 170
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 171 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 215
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 216 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 265 VLLPQETAEIH 275
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DFG+ R ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 508 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDWKKR 565
+ E+ + KL H +I++ F D+E+ ++ E M L FD + K + + +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK 123
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG---EAMKPKISDFGMARIFAKESLE 622
++ Q LL +Q IIHRDLK N+LL E KI+DFG ++I + SL
Sbjct: 124 LYFY----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 178
Query: 623 ENTEQVVGTIGYIPPE----YATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE T G Y+ D +S GV+L +SG
Sbjct: 179 --MRTLCGTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSG 221
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 56
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
EV+L K+ +IR+L + + +LI E P D + F R + +
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEE 115
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAK 618
R Q L ++ ++HRD+K NIL+ GE K+ DFG + K
Sbjct: 116 LARSF----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-K 167
Query: 619 ESLEENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENL 677
+++ + + GT Y PPE+ Y +S V+S G+LL M+CG
Sbjct: 168 DTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP-- 214
Query: 678 SILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-- 735
EH E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 215 --FEHDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHP 261
Query: 736 -----MLKNETTNIN 745
+L ET I+
Sbjct: 262 WMQDVLLPQETAEIH 276
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI DF +AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 44/232 (18%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVM-LTAKLQHVNLIRVLGF 528
+LG G YG V K +P G+++AVK++ T +E K +M L ++ V+ + F
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 529 --CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV------HIIEGITQGLLYLQ 580
+ E + I + + SLD + K ++D + + I I + L +L
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHL- 169
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY-----I 635
+S+L++IHRD+K SN+L+ + K+ DFG++ +S+ + + G Y I
Sbjct: 170 -HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTID--AGCKPYMAPERI 225
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELW 687
PE KG YS KSD++S G+ +++ L+IL Y+ W
Sbjct: 226 NPELNQKG-YSVKSDIWSLGITMIE----------------LAILRFPYDSW 260
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 464 ERFSIRNKLGEGGYGPVYK----GVLPCGEVIAVKKLSKT----STQGFEEFKNEVMLTA 515
E F + LG+GGYG V++ G++ A+K L K + + K E +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 516 KLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQG 575
+++H ++ ++ + LI EY+ L L R+ I + I+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMA 133
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN--TEQVVGTIG 633
L +L + II+RDLK NI+L K++DFG+ KES+ + T GTI
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL----CKESIHDGTVTHTFCGTIE 186
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE + ++ D +S G L+ +++G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 75
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 134
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 135 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 186
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 187 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 231
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P DRP+ E+ +
Sbjct: 232 HDEEIIRG-------QVFFRQRVS----XECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 281 VLLPQETAEIH 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 102
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 161
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 162 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 213
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 214 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 258
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 259 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 308 VLLPQETAEIH 318
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 147 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 198
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 199 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 243
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 244 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 293 VLLPQETAEIH 303
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 78
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
EV+L K+ +IR+L + + +LI E P D + F R + +
Sbjct: 79 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEE 137
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAK 618
R Q L ++ ++HRD+K NIL+ GE K+ DFG + K
Sbjct: 138 LARSF----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-K 189
Query: 619 ESLEENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENL 677
+++ + + GT Y PPE+ Y +S V+S G+LL M+CG
Sbjct: 190 DTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP-- 236
Query: 678 SILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-- 735
EH E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 237 --FEHDEEIIRG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHP 283
Query: 736 -----MLKNETTNIN 745
+L ET I+
Sbjct: 284 WMQDVLLPQETAEIH 298
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
T+ + ++ +G G Y + + + AVK + K+ EE E++L QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEI--EILLRYG-QHPN 77
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+I + D + ++ E M L L +R+ ++ ++ IT+ + YL
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGEL---LDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 582 YSRLTIIHRDLKVSNIL-LGEAMKP---KISDFGMARIFAKESLEENTEQVVG--TIGYI 635
++HRDLK SNIL + E+ P +I DFG FAK+ EN + T ++
Sbjct: 135 QG---VVHRDLKPSNILYVDESGNPESIRICDFG----FAKQLRAENGLLMTPCYTANFV 187
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + Y D++S GVLL +++G
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 472 LGEGGYGPVYKGVLPC-GEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
LG+G +G V K A+KK+ T + +EV L A L H ++R +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 531 DSEERMLI---------------YEYMPNKSLDCYLFDPIRKLILDWKKRVH--IIEGIT 573
E R + EY N++L +D I L+ ++ + + I
Sbjct: 73 --ERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLIHSENLNQQRDEYWRLFRQIL 126
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE----------- 622
+ L Y+ IIHR+LK NI + E+ KI DFG+A+ + SL+
Sbjct: 127 EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR-SLDILKLDSQNLPG 182
Query: 623 --ENTEQVVGTIGYIPPEYAT-KGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
+N +GT Y+ E G Y+ K D +S G++ + I E ++I
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP-----FSTGXERVNI 237
Query: 680 LEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRP 728
L+ + +EF F D++ K +I L + +PN RP
Sbjct: 238 LKKLRSV-----SIEFPPDFDDNKXKVEK-----KIIRLLIDHDPNKRP 276
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L++ R I++RDLK NILL + +ISD G+A + E + + VGT+GY+ PE
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG--QTIKGRVGTVGYMAPE 355
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ D ++ G LL ++I+G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 56
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
EV+L K+ +IR+L + + +LI E P D + F R + +
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEE 115
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAK 618
R Q L ++ ++HRD+K NIL+ GE K+ DFG + K
Sbjct: 116 LARSF----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-K 167
Query: 619 ESLEENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENL 677
+++ + + GT Y PPE+ Y +S V+S G+LL M+CG
Sbjct: 168 DTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP-- 214
Query: 678 SILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-- 735
EH E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 215 --FEHDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHP 261
Query: 736 -----MLKNETTNIN 745
+L ET I+
Sbjct: 262 WMQDVLLPQETAEIH 276
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 64/315 (20%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN- 509
+ + E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNG 56
Query: 510 -----EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDW 562
EV+L K+ +IR+L + + +LI E P D + F R + +
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEE 115
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAK 618
R Q L ++ ++HRD+K NIL+ GE K+ DFG + K
Sbjct: 116 LARSF----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-K 167
Query: 619 ESLEENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENL 677
+++ + + GT Y PPE+ Y +S V+S G+LL M+CG
Sbjct: 168 DTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP-- 214
Query: 678 SILEHAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-- 735
EH E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 215 --FEHDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHP 261
Query: 736 -----MLKNETTNIN 745
+L ET I+
Sbjct: 262 WMQDVLLPQETAEIH 276
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L++ R I++RDLK NILL + +ISD G+A + E + + VGT+GY+ PE
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG--QTIKGRVGTVGYMAPE 355
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISGK 665
Y+ D ++ G LL ++I+G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 58
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 59 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 117
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 118 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 169
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 170 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 214
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 215 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 264 VLLPQETAEIH 274
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR9|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
Length = 499
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 38/221 (17%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPC-------GEVIAVKKLSKTSTQGFEEFKN---EVML 513
+ F I +G+G +G V C ++ A+K ++K E +N E+ +
Sbjct: 15 DHFEILRAIGKGSFGKV------CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQI 68
Query: 514 TAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG-- 571
L+H L+ + D E+ ++ + + L +L ++ VH E
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-----------QQNVHFKEETV 117
Query: 572 ---ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQV 628
I + ++ L IIHRD+K NILL E I+DF +A + +E+ +
Sbjct: 118 KLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITTM 174
Query: 629 VGTIGYIPPEY--ATKGV-YSTKSDVFSFGVLLLQIISGKR 666
GT Y+ PE + KG YS D +S GV +++ G+R
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGB|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGG|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
pdb|1OGG|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
Length = 499
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
pdb|1E6P|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6P|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6N|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
Length = 499
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWQYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 465 RFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN------EVML 513
++ + LG GG+G VY G+ LP +A+K + K + E N EV+L
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 514 TAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSF---- 115
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLEENTEQ 627
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++ + +
Sbjct: 116 FWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFD- 170
Query: 628 VVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYEL 686
GT Y PPE+ Y +S V+S G+LL M+CG EH E+
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEI 216
Query: 687 WKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-------MLKN 739
+G F R S C + C+ P+DRP+ E+ + +L
Sbjct: 217 IRG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 265
Query: 740 ETTNIN 745
ET I+
Sbjct: 266 ETAEIH 271
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 94
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 153
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 154 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 205
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 206 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 250
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ +G F R S C + C+ P+DRP+ E+ +
Sbjct: 251 HDEEIIRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 300 VLLPQETAEIH 310
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens
pdb|1E15|B Chain B, Chitinase B From Serratia Marcescens
pdb|1E6R|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1E6R|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1GPF|A Chain A, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1GPF|B Chain B, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1UR8|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR8|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1W1P|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1P|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1T|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1T|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1V|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1V|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1Y|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1W1Y|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1O6I|A Chain A, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4.
pdb|1O6I|B Chain B, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4
Length = 499
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0G|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0I|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
pdb|1H0I|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
Length = 499
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRTKFAQSCVRIMKDYGFDGVDIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
pdb|1E6Z|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
Length = 498
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 32 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 87
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G+D W P
Sbjct: 88 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQA 147
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 148 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 204
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 205 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 260
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 261 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 320
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 321 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 378
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 379 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 410
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 44/232 (18%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVM-LTAKLQHVNLIRVLGF 528
+LG G YG V K +P G+++AVK++ T +E K +M L ++ V+ + F
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 529 --CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV------HIIEGITQGLLYLQ 580
+ E + I + + SLD + K ++D + + I I + L +L
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHL- 125
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY-----I 635
+S+L++IHRD+K SN+L+ + K+ DFG++ + ++ G Y I
Sbjct: 126 -HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPERI 181
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELW 687
PE KG YS KSD++S G+ +++ L+IL Y+ W
Sbjct: 182 NPELNQKG-YSVKSDIWSLGITMIE----------------LAILRFPYDSW 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 466 FSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHVNLI 523
F + KLG G +G V+ G +K ++K +Q E+ + E+ + L H N+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG-----ITQGLLY 578
++ D ++ E C + + +++ + + EG + Q +
Sbjct: 84 KIFEVFEDYHNMYIVME-------TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 579 LQEYSRLTIIHRDLKVSNILLGEA--MKP-KISDFGMARIFAKESLEENTEQVVGTIGYI 635
L + ++H+DLK NIL + P KI DFG+A +F +E++ GT Y+
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS---DEHSTNAAGTALYM 193
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + V + K D++S GV++ +++G
Sbjct: 194 APEVFKRDV-TFKCDIWSAGVVMYFLLTG 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 471 KLGEGGYGPVYKGV-LPCGEVIAVKKLSKTSTQGFEEFKNEVM-LTAKLQHVN---LIRV 525
++G G YG V K V P G+++AVK++ T + +E K +M L ++ + +++
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 526 LGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLI---LDWKKRVHIIEGIT----QGLLY 578
G + + E M FD K + LD I+ IT + L +
Sbjct: 87 YGALFREGDCWICMELMSTS------FDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 579 LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L+E L IIHRD+K SNILL + K+ DFG++ +S+ + + G Y+ PE
Sbjct: 141 LKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRD--AGCRPYMAPE 195
Query: 639 Y----ATKGVYSTKSDVFSFGVLLLQIISGK 665
A++ Y +SDV+S G+ L ++ +G+
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 49/214 (22%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAV-------KKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
++G G + VYKG L + V +KL+K+ Q FK E LQH N++
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIV 88
Query: 524 RVLGFCIDSEER--------MLIYEYMPNKSLDCYL--FDPIR-KLILDWKKRVHIIEGI 572
R DS E +L+ E + +L YL F + K++ W ++ I
Sbjct: 89 RFY----DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------I 138
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILL-GEAMKPKISDFGMARI----FAKESLEENTEQ 627
+GL +L + IIHRDLK NI + G KI D G+A + FAK
Sbjct: 139 LKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK--------A 189
Query: 628 VVGTIGYIPPE-YATKGVYSTKSDVFSFGVLLLQ 660
V+GT + PE Y K Y DV++FG L+
Sbjct: 190 VIGTPEFXAPEXYEEK--YDESVDVYAFGXCXLE 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPAFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 148 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 199
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 200 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 244
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 245 HDEEIIGG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 294 VLLPQETAEIH 304
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI FG+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 465 RFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN------EVML 513
++ + LG GG+G VY G+ LP +A+K + K + E N EV+L
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 514 TAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSF---- 115
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLEENTEQ 627
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++ + +
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFD- 170
Query: 628 VVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYEL 686
GT Y PPE+ Y +S V+S G+LL M+CG EH E+
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEI 216
Query: 687 WKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-------MLKN 739
+G F R S C + C+ P+DRP+ E+ + +L
Sbjct: 217 IRG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 265
Query: 740 ETTNIN 745
ET I+
Sbjct: 266 ETAEIH 271
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 147 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 198
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 199 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 243
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 244 HDEEIIGG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 293 VLLPQETAEIH 303
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI D G+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 148 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 199
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 200 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 244
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 245 HDEEIIGG-------QVFFRQRVS----XECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 294 VLLPQETAEIH 304
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
++R+ + +G G +G V + + E++AVK + + E K E++ L+H
Sbjct: 18 SDRYELVKDIGAGNFG-VARLMRDKQANELVAVKYIERGEKID-ENVKREIINHRSLRHP 75
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R + ++ EY L + + R + + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYAH 132
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKP--KISDFGMARIFAKES-LEENTEQVVGTIGYIPP 637
+ + HRDLK+ N LL + P KI+DFG ++K S L + VGT YI P
Sbjct: 133 A---MQVAHRDLKLENTLLDGSPAPRLKIADFG----YSKASVLHSQPKSAVGTPAYIAP 185
Query: 638 EYATKGVYSTK-SDVFSFGVLLLQIISG 664
E K Y K +DV+S GV L ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 472 LGEGGYGPVYKG---VLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGF 528
LG GG+G V++ V C I +L E+ EV AKL+H ++R
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNA 71
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPI----RKLILDW---------KKR---VHIIEGI 572
++ E + S YL+ + ++ + DW ++R +HI I
Sbjct: 72 WLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEE--------- 623
+ + +L ++HRDLK SNI K+ DFG+ ++ E+
Sbjct: 128 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 624 --NTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
+T QV GT Y+ PE YS K D+FS G++L +++
Sbjct: 185 ARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 43/220 (19%)
Query: 466 FSIRNKLGEGGYGP-VYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEV-MLTAKLQHVNLI 523
F ++ LG G G VY+G+ +V AVK++ + F EV +L +H N+I
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDV-AVKRIL---PECFSFADREVQLLRESDEHPNVI 81
Query: 524 RVLGFCIDSEERM----------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
R FC + + + + EY+ K +PI +++ T
Sbjct: 82 RY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-----------LLQQTT 128
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEA-----MKPKISDFGMARIFA--KESLEENTE 626
GL +L L I+HRDLK NIL+ +K ISDFG+ + A + S +
Sbjct: 129 SGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS- 184
Query: 627 QVVGTIGYIPPEYATKGVYSTKS---DVFSFGVLLLQIIS 663
V GT G+I PE ++ + D+FS G + +IS
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
++R+ + +G G +G V + + E++AVK + + E K E++ L+H
Sbjct: 17 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKID-ENVKREIINHRSLRHP 74
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R + ++ EY L + + R + + + G+ Y
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCH 131
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKP--KISDFGMARIFAKES-LEENTEQVVGTIGYIPP 637
+ + HRDLK+ N LL + P KI DFG ++K S L + VGT YI P
Sbjct: 132 A---MQVCHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAP 184
Query: 638 EYATKGVYSTK-SDVFSFGVLLLQIISG 664
E K Y K +DV+S GV L ++ G
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 148 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 199
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 200 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 244
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 245 HDEEIIGG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 294 VLLPQETAEIH 304
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI D G+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 88
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 147
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 148 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 199
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 200 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 244
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 245 HDEEIIGG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 294 VLLPQETAEIH 304
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 147 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 198
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 199 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 243
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 244 HDEEIIGG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 293 VLLPQETAEIH 303
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN----- 509
E ++ + LG GG+G VY G+ LP +A+K + K + E N
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVP 87
Query: 510 -EVMLTAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
EV+L K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARS 146
Query: 567 HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLE 622
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++
Sbjct: 147 F----FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVY 198
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILE 681
+ + GT Y PPE+ Y +S V+S G+LL M+CG E
Sbjct: 199 TDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FE 243
Query: 682 HAYELWKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS------ 735
H E+ G F R S C + C+ P+DRP+ E+ +
Sbjct: 244 HDEEIIGG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
Query: 736 -MLKNETTNIN 745
+L ET I+
Sbjct: 293 VLLPQETAEIH 303
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 36/241 (14%)
Query: 445 NRNVPNL------RVYSLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVK 494
N+N+ N + + D+ E + + +G G +G V +K +V A+K
Sbjct: 44 NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR---KVYAMK 100
Query: 495 KLSK-----TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDC 549
LSK S F + ++M A V +++ D ++ EYMP L
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVN 158
Query: 550 YL--FDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKI 607
+ +D K W R + E + L L + IHRD+K N+LL ++ K+
Sbjct: 159 LMSNYDVPEK----WA-RFYTAEVV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKL 209
Query: 608 SDFGMARIFAKESLEENTEQVVGTIGYIPPEY----ATKGVYSTKSDVFSFGVLLLQIIS 663
+DFG KE + + VGT YI PE G Y + D +S GV L +++
Sbjct: 210 ADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268
Query: 664 G 664
G
Sbjct: 269 G 269
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Hexasaccharide
pdb|3B9D|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Pentasaccharide
pdb|3B9E|A Chain A, Crystal Structure Of Inactive Mutant E315m Chitinase A
From Vibrio Harveyi
Length = 584
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 62/333 (18%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K++NP + I SIG G + Y + + +R +F+ S + + + F G+D W
Sbjct: 238 LKQRNPDLKIIPSIG-GWTLSDPFYDFV--DKKNRDTFVASVKKFLKTWKFYDGVDIDWM 294
Query: 142 APNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
P D N G L E R+ +L+A+ T + L Y +
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKIED 352
Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-------------- 237
+++Q +++I A+T +Y + N ALY G F R
Sbjct: 353 VDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDENGE 407
Query: 238 -------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA-- 282
+ D ++ + +G+ A+KLV+ YG W TL P D G A
Sbjct: 408 PYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKL 467
Query: 283 ----GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFGFD 331
+++ G++ YK IK+ + T + Y++ E + STG + FD
Sbjct: 468 KGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFD 526
Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
D +V AK YAK L G ++W++ D+ D L
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 56 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 110 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 224
Query: 642 KGVYSTKSDVFSFGVLLLQIISGKRL 667
Y++ DV+S G +L +++ G+ +
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPI 250
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 62 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 116 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + Y PE
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRY-YRAPELIF 229
Query: 642 KGV-YSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 464 ERFSIRNKLGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHV 520
ER+ + +G G YG V G +AVKKLS+ S + E+ L ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSL----DCYLFDPI-----------RKLILDWKKR 565
N+I +L + P +SL D YL + +KL D +
Sbjct: 82 NVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ- 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+I I +GL Y+ IIHRDLK SN+ + E + KI D G+AR ++
Sbjct: 129 -FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEM 179
Query: 626 EQVVGTIGYIPPEYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3B8S|B Chain B, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3ARO|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure
pdb|3ARP|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Dequalinium
pdb|3ARQ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Idarubicin
pdb|3ARR|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Pentoxifylline
pdb|3ARV|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Sanguinarine
pdb|3ARW|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Chelerythrine
pdb|3ARX|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Propentofylline
pdb|3ARY|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
pdb|3ARZ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
Length = 584
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 62/333 (18%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSIRIARLYGF-RGLDFAWT 141
+K++NP + I SIG G + Y + + +R +F+ S + + + F G+D W
Sbjct: 238 LKQRNPDLKIIPSIG-GWTLSDPFYDFV--DKKNRDTFVASVKKFLKTWKFYDGVDIDWE 294
Query: 142 APNTST------DMFNIG----LLFDEWRIAATKLDAKNSTRQQSLLILTARFRYSPPAN 191
P D N G L E R+ +L+A+ T + L Y +
Sbjct: 295 FPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAE--TGRTYELTSAIGVGYDKIED 352
Query: 192 SYLLNSIQRNLNWIHAVTASYYEPVSTNFTAPPAALYGSISGRFAR-------------- 237
+++Q +++I A+T +Y + N ALY G F R
Sbjct: 353 VDYADAVQY-MDYIFAMTYDFYGGWN-NVPGHQTALY---CGSFMRPGQCDGGGVDENGE 407
Query: 238 -------STDQVLKAWIERGLSADKLVMCLPFYGYAW------TLVKPEDNGIGAAAA-- 282
+ D ++ + +G+ A+KLV+ YG W TL P D G A
Sbjct: 408 PYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKL 467
Query: 283 ----GPALYDSGLVTYKKIKNHI----KTYGPDVQVMYNSTYEVNYF---STGTVWFGFD 331
+++ G++ YK IK+ + T + Y++ E + STG + FD
Sbjct: 468 KGSTAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFD 526
Query: 332 DVEAVRAKIAYAKEKRLLGYYAWQVSFDDHDWL 364
D +V AK YAK L G ++W++ D+ D L
Sbjct: 527 DHRSVLAKGNYAKSLGLAGLFSWEIDADNGDIL 559
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 36/241 (14%)
Query: 445 NRNVPNL------RVYSLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVK 494
N+N+ N + + D+ E + + +G G +G V +K +V A+K
Sbjct: 49 NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR---KVYAMK 105
Query: 495 KLSK-----TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDC 549
LSK S F + ++M A V +++ D ++ EYMP L
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVN 163
Query: 550 YL--FDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKI 607
+ +D K W R + E + L L + IHRD+K N+LL ++ K+
Sbjct: 164 LMSNYDVPEK----WA-RFYTAEVV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKL 214
Query: 608 SDFGMARIFAKESLEENTEQVVGTIGYIPPEY----ATKGVYSTKSDVFSFGVLLLQIIS 663
+DFG KE + + VGT YI PE G Y + D +S GV L +++
Sbjct: 215 ADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
Query: 664 G 664
G
Sbjct: 274 G 274
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 40 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 94 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 208
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDS-EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT- 586
S E++ ++Y N LD Y+ + + ++ + + + I L Q + L
Sbjct: 82 FYSSGEKKDVVYL---NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 587 -----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYA 640
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIF 195
Query: 641 TKGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKT--STQGFEEFKNEVM 512
AD + + + +G+G + V + +L G+ +AVK + KT ++ ++ EV
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 513 LTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ L H N++++ I++E+ + L+ EY + YL R + + + I
Sbjct: 66 IXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
Q Y + I+HRDLK N+LL KI+DFG + F + + G
Sbjct: 125 AVQ---YCHQK---FIVHRDLKAENLLLDADXNIKIADFGFSNEF---TFGNKLDAFCGA 175
Query: 632 IGYIPPE-YATKGVYSTKSDVFSFGVLLLQIISG 664
Y PE + K + DV+S GV+L ++SG
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 36 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 90 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 204
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 463 TERFSIRNKLGEGGYG--PVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
++R+ +G G +G + + L E++AVK + + + E + E++ L+H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAID-ENVQREIINHRSLRHP 76
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R + +I EY L + + R + + + G+ Y
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCH 133
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKP--KISDFGMARIFAKES-LEENTEQVVGTIGYIPP 637
+ I HRDLK+ N LL + P KI DFG ++K S L + VGT YI P
Sbjct: 134 S---MQICHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAP 186
Query: 638 EYATKGVYSTK-SDVFSFGVLLLQIISG 664
E + Y K +DV+S GV L ++ G
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 47 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 101 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 215
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 33 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 87 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 201
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 62 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 116 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 230
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 40 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 94 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 208
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 47/248 (18%)
Query: 460 EAATERFSIR-------NKLGEGGYGPVYKGV-LPCGEVIAVKKLSKT-STQGFEEFKNE 510
+ A E F ++ +LG G YG V K +P G++ AVK++ T ++Q + +
Sbjct: 23 QGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXD 82
Query: 511 VMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV---- 566
+ ++ + + E + I + + SLD + K ++D + +
Sbjct: 83 LDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFY-----KQVIDKGQTIPEDI 137
Query: 567 --HIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN 624
I I + L +L +S+L++IHRD+K SN+L+ + K DFG++ + ++
Sbjct: 138 LGKIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI 195
Query: 625 TEQVVGTIGY-----IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
G Y I PE KG YS KSD++S G+ ++ L+I
Sbjct: 196 D---AGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIE----------------LAI 235
Query: 680 LEHAYELW 687
L Y+ W
Sbjct: 236 LRFPYDSW 243
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 82 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 196
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 66 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 120 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + Y PE
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIF 233
Query: 642 KGV-YSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 64 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 118 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + Y PE
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIF 231
Query: 642 KGV-YSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 41 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 95 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 209
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 36/241 (14%)
Query: 445 NRNVPNL------RVYSLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVK 494
N+N+ N + + D+ E + + +G G +G V +K +V A+K
Sbjct: 49 NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR---KVYAMK 105
Query: 495 KLSK-----TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDC 549
LSK S F + ++M A V +++ D ++ EYMP L
Sbjct: 106 LLSKFEMIKRSDSAFFWEERDIMAFANSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVN 163
Query: 550 YL--FDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKI 607
+ +D K W R + E + L L + IHRD+K N+LL ++ K+
Sbjct: 164 LMSNYDVPEK----WA-RFYTAEVV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKL 214
Query: 608 SDFGMARIFAKESLEENTEQVVGTIGYIPPEY----ATKGVYSTKSDVFSFGVLLLQIIS 663
+DFG KE + + VGT YI PE G Y + D +S GV L +++
Sbjct: 215 ADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
Query: 664 G 664
G
Sbjct: 274 G 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 466 FSIRNKLGEGGYGPVY--KGVLPCGEVIAVKKLSKTSTQ--GFEEFKNEVMLTAKLQHVN 521
+ + +G+G + V + +L G +A+K + KT ++ EV + L H N
Sbjct: 14 YRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 522 LIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
++++ I++E+ + LI EY + YL R + K+ I + Y
Sbjct: 73 IVKLFE-VIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCH 128
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPE-Y 639
+ I+HRDLK N+LL M KI+DFG + F ++ + G+ Y PE +
Sbjct: 129 QKR---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELF 182
Query: 640 ATKGVYSTKSDVFSFGVLLLQIISG 664
K + DV+S GV+L ++SG
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 462 ATERFSIRNKLGEGGYGPVYKG-VLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
+ F LG+G +G V V G++ AVK L K ++ E +T K + +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--LQDDDVECTMTEK-RIL 77
Query: 521 NLIRVLGF------CIDSEERML-IYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
+L R F C + +R+ + E++ L +F + D + I
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEII 134
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
L++L + II+RDLK+ N+LL K++DFGM + + T GT
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATFCGTPD 189
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
YI PE + +Y D ++ GVLL +++ G
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 29 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 83 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 197
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 82 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 196
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 82 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 196
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 107 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 161 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + Y PE
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIF 274
Query: 642 KGV-YSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ + ++ +G G Y + V + AVK + K+ EE E++L QH N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EILLRYG-QHPN 82
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+I + D + L+ E M L L +R+ ++ ++ I + + YL
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 582 YSRLTIIHRDLKVSNIL-LGEAMKP---KISDFGMARIFAKESLEENTEQVVG--TIGYI 635
++HRDLK SNIL + E+ P +I DFG FAK+ EN + T ++
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFG----FAKQLRAENGLLMTPCYTANFV 192
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + Y D++S G+LL +++G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 82 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 196
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 529 CIDSEERML-IYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
C +E R+ + EY+ L +F R+ L + I+ L YL E I
Sbjct: 89 CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 142
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE--ENTEQVVGTIGYIPPEYATKGVY 645
I+RDLK+ N+LL K++D+GM KE L + T GT YI PE Y
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGM----CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 646 STKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
D ++ GVL+ ++++G+ + G ++N
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 498 KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML-IYEYMPNKSLDCYLFDPIR 556
+T FE+ N L L C +E R+ + EY+ L +F R
Sbjct: 57 QTEKHVFEQASNHPFLVG----------LHSCFQTESRLFFVIEYVNGGDL---MFHMQR 103
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L + I+ L YL E II+RDLK+ N+LL K++D+GM
Sbjct: 104 QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGM---- 156
Query: 617 AKESLE--ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN 674
KE L + T GT YI PE Y D ++ GVL+ ++++G+ + G +
Sbjct: 157 CKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216
Query: 675 EN 676
+N
Sbjct: 217 DN 218
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 32 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 86 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFG 200
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERM------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
S E+ L+ +Y+P + ++ + + + I L Q +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPAT---------VYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 583 SRLT------IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
L I HRD+K N+LL + K+ DFG A+ + E N +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRA 190
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
P Y++ DV+S G +L +++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From
Serratia Marcescens At 1.45 A Resolution
pdb|1GOI|B Chain B, Crystal Structure Of The D140n Mutant Of Chitinase B From
Serratia Marcescens At 1.45 A Resolution
Length = 499
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 158/392 (40%), Gaps = 79/392 (20%)
Query: 37 VSTISGINYDLFTHLICSSADINSTTYQLSLSLPSDENQIAKFADTV------KKKNPSI 90
VS I+ TH+ S DINS L + N AK D V K NPS+
Sbjct: 33 VSNITPAKAKQLTHINFSFLDINSN---LECAWDPATND-AKARDVVNRLTALKAHNPSL 88
Query: 91 TTILSIGQGKDTN-----YSIYSSMVRNSSHRKSFIDSSIRIARLYGFRGLDFAWTAPNT 145
+ SIG +N ++ Y + V+ + R F S +RI + YGF G++ W P
Sbjct: 89 RIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQA 148
Query: 146 S-TDMFNIGLLFDEWRI---AATKLDAKNSTRQQSLLILTARFRYSPPANSYLLNSIQRN 201
+ D F L E R T D + + Q L I A + L I
Sbjct: 149 AEVDGFIAAL--QEIRTLLNQQTITDGRQALPYQ-LTIAGAGGAFFLSRYYSKLAQIVAP 205
Query: 202 LNWIHAVT---ASYYEPVSTNFTAPPAALYGSISG----------RFARSTDQVLKAW-- 246
L++I+ +T A +E V+ + AAL+G +G S +++ +A+
Sbjct: 206 LDYINLMTYDLAGPWEKVTNH----QAALFGDAAGPTFYNALREANLGWSWEELTRAFPS 261
Query: 247 --------------IERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAAGPAL------ 286
+ G+ + K+VM +PFYG A+ V + G ++ + P
Sbjct: 262 PFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPST 321
Query: 287 -------------YDSGLVTYKKIKNHIK-TYGPDVQVMYNSTYEVNYF--STGTVWFGF 330
D + +Y++++ ++ YG Q ++N + Y + ++ +
Sbjct: 322 DYWLVGCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTY 379
Query: 331 DDVEAVRAKIAYAKEKRLLGYYAWQVSFDDHD 362
DD E+ + K Y K+++L G W + D+ +
Sbjct: 380 DDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 529 CIDSEERML-IYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTI 587
C +E R+ + EY+ L +F R+ L + I+ L YL E I
Sbjct: 121 CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 174
Query: 588 IHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE--ENTEQVVGTIGYIPPEYATKGVY 645
I+RDLK+ N+LL K++D+GM KE L + T GT YI PE Y
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGM----CKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 646 STKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
D ++ GVL+ ++++G+ + G ++N
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSKTSTQGFEEFKN--EVMLTAKLQ 518
+R +G G YG V Y L + +AVKKLS+ + E+ L L+
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK 77
Query: 519 HVNLIRVLG-FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I +L F + Y+ + L + ++ L + ++ + +GL
Sbjct: 78 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLK 137
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
Y+ IIHRDLK SN+ + E + +I DFG+AR +E V T Y P
Sbjct: 138 YIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAP 189
Query: 638 EYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
E + Y+ D++S G ++ +++ GK L
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 131
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 132 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 186
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 465 RFSIRNKLGEGGYGPVYKGV-----LPCGEVIAVKKLSKTSTQGFEEFKN------EVML 513
++ + LG GG+G VY G+ LP +A+K + K + E N EV+L
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 514 TAKLQ--HVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
K+ +IR+L + + +LI E P D + F R + + R
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSF---- 115
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFAKESLEENTEQ 627
Q L ++ ++HRD+K NIL+ GE K+ DFG + K+++ + +
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL---KLIDFGSGALL-KDTVYTDFD- 170
Query: 628 VVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYEL 686
GT Y PPE+ Y +S V+S G+LL M+CG EH E+
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEI 216
Query: 687 WKGGKGVEFVDSFLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSS-------MLKN 739
G F R S C + C+ P+DRP+ E+ + +L
Sbjct: 217 IGG-------QVFFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 265
Query: 740 ETTNIN 745
ET I+
Sbjct: 266 ETAEIH 271
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSKTSTQGFEEFKN--EVMLTAKLQ 518
+R +G G YG V Y L + +AVKKLS+ + E+ L L+
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK 85
Query: 519 HVNLIRVLGFCIDSEERMLIYE-YMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I +L + E Y+ + L + ++ L + ++ + +GL
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLK 145
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
Y+ IIHRDLK SN+ + E + +I DFG+AR +E V T Y P
Sbjct: 146 YIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAP 197
Query: 638 EYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
E + Y+ D++S G ++ +++ GK L
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQG-----------F 504
+A++ A ++++ + G YG V GV G +A+K++ T + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDW 562
+ E+ L H N++ + + EE + Y+ + + L I +++++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
+ + + I GL L E ++HRDL NILL + I DF +AR +++ +
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTAD 187
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTK-SDVFSFGVLLLQIISGKRL 667
N V Y PE + TK D++S G ++ ++ + K L
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 498 KTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML-IYEYMPNKSLDCYLFDPIR 556
+T FE+ N L L C +E R+ + EY+ L +F R
Sbjct: 53 QTEKHVFEQASNHPFLVG----------LHSCFQTESRLFFVIEYVNGGDL---MFHMQR 99
Query: 557 KLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIF 616
+ L + I+ L YL E II+RDLK+ N+LL K++D+GM
Sbjct: 100 QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGM---- 152
Query: 617 AKESLE--ENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRLSMLCGIN 674
KE L + T GT YI PE Y D ++ GVL+ ++++G+ + G +
Sbjct: 153 CKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 212
Query: 675 EN 676
+N
Sbjct: 213 DN 214
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 131
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 132 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 186
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 465 RFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
R+ LG GG G V+ V C + +A+KK+ T Q + E+ + +L H N++
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 524 RVLGFCIDSEERM--------------LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHII 569
+V S ++ ++ EYM + P +L+ R+ +
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP----LLEEHARLFMY 127
Query: 570 EGITQGLLYLQEYSRLTIIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEEN--TE 626
+ + +GL Y+ + ++HRDLK +N+ + E + KI DFG+ARI + +E
Sbjct: 128 Q-LLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 627 QVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
+V P + Y+ D+++ G + ++++GK L
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
++ + ++ +G G Y + V + AVK + K+ EE E++L QH N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EILLRYG-QHPN 82
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+I + D + L+ E M L L +R+ ++ ++ I + + YL
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 582 YSRLTIIHRDLKVSNIL-LGEAMKP---KISDFGMARIFAKESLEENTEQVVG--TIGYI 635
++HRDLK SNIL + E+ P +I DFG FAK+ EN + T ++
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFG----FAKQLRAENGLLMTPCYTANFV 192
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + Y D++S G+LL +++G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 460 EAATERFSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEV 511
E + + +LG G + V K G+ + I K+ +K+S +G E+ + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREV 65
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG 571
+ ++QH N+I + + + +LI E + L +L + K L ++ ++
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQ 122
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQ 627
I G+ YL L I H DLK NI+L + PK I DFG+A K +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKN 176
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT ++ PE ++D++S GV+ ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 456 LADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQG-----------F 504
+A++ A ++++ + G YG V GV G +A+K++ T + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 505 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPI--RKLILDW 562
+ E+ L H N++ + + EE + Y+ + + L I +++++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 563 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLE 622
+ + + I GL L E ++HRDL NILL + I DF +AR +++ +
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTAD 187
Query: 623 ENTEQVVGTIGYIPPEYATKGVYSTK-SDVFSFGVLLLQIISGKRL 667
N V Y PE + TK D++S G ++ ++ + K L
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + + LG G V + + P + AVK + T F + + + A L+ V++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 523 IR-VLGF-----CIDSEER----MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
+R V G D+ E L+++ M L YL K+ L K+ I+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 133
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
+ + L +L I+HRDLK NILL + M K++DFG + + E +V GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTP 187
Query: 633 GYIPPEYATKGV------YSTKSDVFSFGVLLLQIISG 664
Y+ PE + Y + D++S GV++ +++G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 472 LGEGGYGPVYKGVLPC--GEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVLGF 528
+G G +G VY+ L C GE++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 529 CIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLT-- 586
S E+ E N LD Y+ + + ++ + + + I L Q + L
Sbjct: 82 FYSSGEKK--DEVYLNLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 587 ----IIHRDLKVSNILLG-EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I HRD+K N+LL + K+ DFG A+ + E N + P
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFG 196
Query: 642 KGVYSTKSDVFSFGVLLLQIISGK 665
Y++ DV+S G +L +++ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + + LG G V + + P + AVK + T F + + + A L+ V++
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 523 IR-VLGF-----CIDSEER----MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
+R V G D+ E L+++ M L YL K+ L K+ I+ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 120
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
+ + L +L I+HRDLK NILL + M K++DFG + + E +V GT
Sbjct: 121 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLREVCGTP 174
Query: 633 GYIPPEYATKGV------YSTKSDVFSFGVLLLQIISG 664
Y+ PE + Y + D++S GV++ +++G
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 494 KKLSKTSTQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYL 551
K+ +K+S +G E+ + EV + ++QH N+I + + + +LI E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 552 FDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPK----I 607
+ K L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 608 SDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
DFG+A K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 445 NRNVPNLR------VYSLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVK 494
N+N+ N V + ++ E + + +G G +G V +K +V A+K
Sbjct: 50 NKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKA---SQKVYAMK 106
Query: 495 KLSK-----TSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML--IYEYMPNKSL 547
LSK S F + ++M A V V FC +++ L + EYMP L
Sbjct: 107 LLSKFEMIKRSDSAFFWEERDIMAFANSPWV----VQLFCAFQDDKYLYMVMEYMPGGDL 162
Query: 548 DCYL--FDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP 605
+ +D K W K + +L L + +IHRD+K N+LL +
Sbjct: 163 VNLMSNYDVPEK----WAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL 213
Query: 606 KISDFGMARIFAKESLEENTEQVVGTIGYIPPEY----ATKGVYSTKSDVFSFGVLLLQI 661
K++DFG + E+ + + VGT YI PE G Y + D +S GV L ++
Sbjct: 214 KLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Query: 662 ISG 664
+ G
Sbjct: 273 LVG 275
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSKTSTQGFEEFKN--EVMLTAKLQ 518
+R +G G YG V Y L + +AVKKLS+ + E+ L L+
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK 85
Query: 519 HVNLIRVLG-FCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I +L F + Y+ + L + ++ L + ++ + +GL
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLK 145
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPP 637
Y+ IIHRDLK SN+ + E + +I DFG+AR +E V T Y P
Sbjct: 146 YIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAP 197
Query: 638 EYATKGV-YSTKSDVFSFGVLLLQIISGKRL 667
E + Y+ D++S G ++ +++ GK L
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 471 KLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHVNL 522
+LG G + V K G+ + I K+ +K+S +G E+ + EV + ++QH N+
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 523 IRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEY 582
I + + + +LI E + L +L + K L ++ ++ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS- 132
Query: 583 SRLTIIHRDLKVSNILLGEAMKPK----ISDFGMARIFAKESLEENTEQVVGTIGYIPPE 638
L I H DLK NI+L + PK I DFG+A K + + GT ++ PE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 639 YATKGVYSTKSDVFSFGVLLLQIISG 664
++D++S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
++R+ + +G G +G V + + E++AVK + + K E++ L+H
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIA-ANVKREIINHRSLRHP 75
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R + ++ EY L + + R + + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCH 132
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKP--KISDFGMARIFAKES-LEENTEQVVGTIGYIPP 637
+ + HRDLK+ N LL + P KI DFG ++K S L + VGT YI P
Sbjct: 133 A---MQVCHRDLKLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAP 185
Query: 638 EYATKGVYSTK-SDVFSFGVLLLQIISG 664
E K Y K +DV+S GV L ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 457 ADIEAATERFSIRNKLGEGGYGPVYKGVLPCGEVI-AVKKLSKTSTQGFEEFKNEV---- 511
++ A F +G+G +G V EV AVK L K + +E K+ +
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 512 MLTAKLQHVNLIRVLGFCIDSEERM-LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
+L ++H L+ L F + +++ + +Y+ L +L + L+ + R + E
Sbjct: 91 VLLKNVKHPFLVG-LHFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAE 147
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEEN--TEQV 628
I L YL L I++RDLK NILL ++DFG+ KE++E N T
Sbjct: 148 -IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGL----CKENIEHNSTTSTF 199
Query: 629 VGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT Y+ PE K Y D + G +L +++ G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVL-PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNL 522
E + + LG G V + + P + AVK + T F + + + A L+ V++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 523 IR-VLGF-----CIDSEER----MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGI 572
+R V G D+ E L+++ M L YL K+ L K+ I+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 133
Query: 573 TQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTI 632
+ + L +L I+HRDLK NILL + M K++DFG + + E V GT
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLRSVCGTP 187
Query: 633 GYIPPEYATKGV------YSTKSDVFSFGVLLLQIISG 664
Y+ PE + Y + D++S GV++ +++G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F +G G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EYMP + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + K++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F +G G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EYMP + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + K++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 472 LGEGGYGPVYKGV-LPCGEVIAVKKLSK--TSTQGFEEFKNEVMLTAKLQHVNLIRVLG- 527
+G G YG V V G +A+KKL + S + E+ L ++H N+I +L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 528 FCIDS--EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVH-IIEGITQGLLYLQEYSR 584
F D ++ Y MP D KL D R+ ++ + +GL Y+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED---RIQFLVYQMLKGLRYIHAAG- 148
Query: 585 LTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGV 644
IIHRDLK N+ + E + KI DFG+AR + V T Y PE +
Sbjct: 149 --IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWM 201
Query: 645 -YSTKSDVFSFGVLLLQIISGKRL 667
Y+ D++S G ++ ++I+GK L
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGKTL 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYL--------FDPIRKLILDWKKR 565
H N+I +L + P KSL D Y+ + ++ LD ++
Sbjct: 81 NHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+++ + G+ +L IIHRDLK SNI++ KI DFG+AR + T
Sbjct: 129 SYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MT 183
Query: 626 EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
VV T Y PE Y D++S GV++ ++I G
Sbjct: 184 PYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVL 526
++ +G+G +G V++G GE +AVK S + + F+ E+ T L+H N +L
Sbjct: 8 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---IL 61
Query: 527 GF-CIDSEER------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
GF D+++ L+ +Y + SL FD + + + + + + GL +L
Sbjct: 62 GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHL 117
Query: 580 Q-----EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA--RIFAKESLEENTEQVVGTI 632
+ I HRDLK NIL+ + I+D G+A A ++++ VGT
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 633 GYIPPEYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
Y+ PE + ++D+++ G++ +I R + GI+E+ +
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYL--------FDPIRKLILDWKKR 565
H N+I +L + P KSL D Y+ + ++ LD ++
Sbjct: 81 NHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+++ + G+ +L IIHRDLK SNI++ KI DFG+AR + T
Sbjct: 129 SYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MT 183
Query: 626 EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
VV T Y PE Y D++S GV++ ++I G
Sbjct: 184 PYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K +E ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+++ + K++DFG+A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 129/317 (40%), Gaps = 65/317 (20%)
Query: 458 DIEAATERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKN------E 510
D EA + + LG+GG+G V+ G + +A+K + + G+ + E
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 511 VMLTAKL----QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRV 566
V L K+ H +IR+L + E ML+ E P + D LFD I ++
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQD--LFDYI-------TEKG 134
Query: 567 HIIEGIT-----QGLLYLQEYSRLTIIHRDLKVSNILL----GEAMKPKISDFGMARIFA 617
+ EG + Q + +Q ++HRD+K NIL+ G A K+ DFG +
Sbjct: 135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA---KLIDFGSGALLH 191
Query: 618 KESLEENTEQVVGTIGYIPPEYATKGVY-STKSDVFSFGVLLLQIISGKRLSMLCGINEN 676
E + GT Y PPE+ ++ Y + + V+S G+LL ++ G +
Sbjct: 192 DEPYTDFD----GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD-----IPFERD 242
Query: 677 LSILEHAYELWKGGKGVEFVDSFLDDRNSP--CKLMRCLEIALLCVQENPNDRPSMLEVS 734
ILE + SP C L+R C+ P+ RPS+ E+
Sbjct: 243 QEILE--------------AELHFPAHVSPDCCALIR------RCLAPKPSSRPSLEEIL 282
Query: 735 SMLKNETTNINTPKKPA 751
+T + P P+
Sbjct: 283 LDPWMQTPAEDVPLNPS 299
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVLPCGEV-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
T+ + ++ +G G Y + + AVK + K+ EE E++L QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEI--EILLRYG-QHPN 77
Query: 522 LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQE 581
+I + D + ++ E L L +R+ ++ ++ IT+ + YL
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGEL---LDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 582 YSRLTIIHRDLKVSNIL-LGEAMKP---KISDFGMARIFAKESLEEN--TEQVVGTIGYI 635
++HRDLK SNIL + E+ P +I DFG FAK+ EN T ++
Sbjct: 135 QG---VVHRDLKPSNILYVDESGNPESIRICDFG----FAKQLRAENGLLXTPCYTANFV 187
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE + Y D++S GVLL ++G
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVL 526
++ +G+G +G V++G GE +AVK S + + F+ E+ T L+H N +L
Sbjct: 10 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---IL 63
Query: 527 GF-CIDSEER------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
GF D+++ L+ +Y + SL FD + + + + + + GL +L
Sbjct: 64 GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHL 119
Query: 580 Q-----EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA--RIFAKESLEENTEQVVGTI 632
+ I HRDLK NIL+ + I+D G+A A ++++ VGT
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 633 GYIPPEYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
Y+ PE + ++D+++ G++ +I R + GI+E+ +
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 229
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVL 526
++ +G+G +G V++G GE +AVK S + + F+ E+ T L+H N +L
Sbjct: 13 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---IL 66
Query: 527 GF-CIDSEER------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
GF D+++ L+ +Y + SL FD + + + + + + GL +L
Sbjct: 67 GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHL 122
Query: 580 Q-----EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA--RIFAKESLEENTEQVVGTI 632
+ I HRDLK NIL+ + I+D G+A A ++++ VGT
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 633 GYIPPEYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
Y+ PE + ++D+++ G++ +I R + GI+E+ +
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVL 526
++ +G+G +G V++G GE +AVK S + + F+ E+ T L+H N +L
Sbjct: 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---IL 60
Query: 527 GF-CIDSEER------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
GF D+++ L+ +Y + SL FD + + + + + + GL +L
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHL 116
Query: 580 Q-----EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA--RIFAKESLEENTEQVVGTI 632
+ I HRDLK NIL+ + I+D G+A A ++++ VGT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 633 GYIPPEYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
Y+ PE + ++D+++ G++ +I R + GI+E+ +
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVL 526
++ +G+G +G V++G GE +AVK S + + F+ E+ T L+H N +L
Sbjct: 33 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---IL 86
Query: 527 GF-CIDSEER------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
GF D+++ L+ +Y + SL FD + + + + + + GL +L
Sbjct: 87 GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHL 142
Query: 580 Q-----EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA--RIFAKESLEENTEQVVGTI 632
+ I HRDLK NIL+ + I+D G+A A ++++ VGT
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 202
Query: 633 GYIPPEYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
Y+ PE + ++D+++ G++ +I R + GI+E+ +
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 252
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVI-QMELDHERMSYLLYQMLX 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM---MTPYVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
++R+ + +G G +G V + + E++AVK + + E K E++ L+H
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKID-ENVKREIINHRSLRHP 75
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R + ++ EY L + + R + + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCH 132
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKP--KISDFGMARIFAKES-LEENTEQVVGTIGYIPP 637
+ + HRDLK+ N LL + P KI FG ++K S L + VGT YI P
Sbjct: 133 A---MQVCHRDLKLENTLLDGSPAPRLKICAFG----YSKSSVLHSQPKSTVGTPAYIAP 185
Query: 638 EYATKGVYSTK-SDVFSFGVLLLQIISG 664
E K Y K +DV+S GV L ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 463 TERFSIRNKLGEGGYGPVYKGVL--PCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHV 520
++R+ + +G G +G V + + E++AVK + + E K E++ L+H
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKID-ENVKREIINHRSLRHP 75
Query: 521 NLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQ 580
N++R + ++ EY L + + R + + + G+ Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCH 132
Query: 581 EYSRLTIIHRDLKVSNILLGEAMKP--KISDFGMARIFAKES-LEENTEQVVGTIGYIPP 637
+ + HRDLK+ N LL + P KI FG ++K S L + VGT YI P
Sbjct: 133 A---MQVCHRDLKLENTLLDGSPAPRLKICAFG----YSKSSVLHSQPKDTVGTPAYIAP 185
Query: 638 EYATKGVYSTK-SDVFSFGVLLLQIISG 664
E K Y K +DV+S GV L ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 468 IRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHVNLIRVL 526
++ +G+G +G V++G GE +AVK S + + F+ E+ T L+H N +L
Sbjct: 46 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---IL 99
Query: 527 GF-CIDSEER------MLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYL 579
GF D+++ L+ +Y + SL FD + + + + + + GL +L
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHL 155
Query: 580 Q-----EYSRLTIIHRDLKVSNILLGEAMKPKISDFGMA--RIFAKESLEENTEQVVGTI 632
+ I HRDLK NIL+ + I+D G+A A ++++ VGT
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 633 GYIPPEYATKGVYS------TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 679
Y+ PE + ++D+++ G++ +I R + GI+E+ +
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 265
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V + VL G +AVKKLS+ T ++ V+L +
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKC-V 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I + LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIH-MELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + T VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVV-TRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D++S G ++ +++ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + T +VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPEVV-TRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y D++S G ++ ++I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 118
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 175
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + T VV T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVV-TRYY 229
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 262
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 64/243 (26%)
Query: 466 FSIRNKLGEGGYGPVYKGV--LPCG--EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVN 521
F I +K+GEG + VY L G E IA+K L TS + + + A+LQ +
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--------HPIRIAAELQCLT 74
Query: 522 LI----RVLG--FCIDSEERMLI-YEYMPNKS----LDCYLFDPIRKLILDWKKRVHIIE 570
+ V+G +C + ++I Y+ ++S L+ F +R+ +L+ K
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFK------ 128
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKP-KISDFGMA-----------RIFAK 618
L+ + I+HRD+K SN L +K + DFG+A +
Sbjct: 129 -------ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 619 ESLEENTEQ---------------VVGTIGYIPPEYATKGVYSTKS-DVFSFGVLLLQII 662
E+ +E Q GT G+ PE TK T + D++S GV+ L ++
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 663 SGK 665
SG+
Sbjct: 242 SGR 244
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 489 EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
+++ V K + + E+ K E + L+H +++ +L +++E+M L
Sbjct: 57 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 115
Query: 549 CYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG--EA 602
F+ +++ + H + I + L Y + + IIHRD+K +LL E
Sbjct: 116 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN 170
Query: 603 MKP-KISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQI 661
P K+ FG+A + L VGT ++ PE + Y DV+ GV+L +
Sbjct: 171 SAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 228
Query: 662 ISG 664
+SG
Sbjct: 229 LSG 231
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM---MTPYVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVI-QMELDHERMSYLLYQMLX 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM---MTPYVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K +E ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+++ + +++DFG+A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 465 RFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTST------------QGFEEFKNEVM 512
++ + + LGEG YG V EV+ + L + + G K E+
Sbjct: 6 KYLMGDLLGEGSYGKVK-------EVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 513 LTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEG- 571
L +L+H N+I+++ + E++ + YM + C + + + + +KR + +
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCGMQEMLDSVP---EKRFPVCQAH 112
Query: 572 -----ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTE 626
+ GL YL I+H+D+K N+LL KIS G+A + ++
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 627 QVVGTIGYIPPEYAT--KGVYSTKSDVFSFGVLLLQIISG 664
G+ + PPE A K D++S GV L I +G
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 489 EVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLIYEYMPNKSLD 548
+++ V K + + E+ K E + L+H +++ +L +++E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 113
Query: 549 CYLFDPIRK----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLG--EA 602
F+ +++ + H + I + L Y + + IIHRD+K +LL E
Sbjct: 114 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN 168
Query: 603 MKP-KISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQI 661
P K+ FG+A + L VGT ++ PE + Y DV+ GV+L +
Sbjct: 169 SAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
Query: 662 ISG 664
+SG
Sbjct: 227 LSG 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM---MTPYVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 73
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVI-QMELDHERMSYLLYQMLX 130
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM---MTPYVVTRYY 184
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F +G G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + K++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V + VL G +AVKKLS+ T ++ V+L +
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKC-V 78
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I + LD ++ +++ +
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIH-MELDHERMSYLLYQMLC 135
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + + T VV T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVV-TRYY 189
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y D++S G ++ +++ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + E V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MEPEVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKIL 224
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 471 KLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFK-NEVMLTAKLQHVNLIRVLGFC 529
K+G G YG VYK G+ L + G E+ L +L+H N+I +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 530 IDSEERM--LIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLY-----LQEY 582
+ +R L+++Y + F K KK V + G+ + LLY +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 583 SRLTIIHRDLKVSNIL-LGEAM---KPKISDFGMARIF-AKESLEENTEQVVGTIGYIPP 637
++HRDLK +NIL +GE + KI+D G AR+F + + + VV T Y P
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 638 EYATKGVYSTKS-DVFSFGVLLLQIISGK 665
E + TK+ D+++ G + ++++ +
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL--ILDWKKRVHIIEGITQ 574
VN L+++ D+ ++ EY+P + F +R++ + R + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA----AQ 149
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
+L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL--ILDWKKRVHIIEGITQ 574
VN L+++ D+ ++ EY+P + F +R++ + R + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA----AQ 149
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
+L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL--ILDWKKRVHIIEGITQ 574
VN L+++ D+ ++ EY+P + F +R++ + R + Q
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA----AQ 150
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
+L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYL--------FDPIRKLILDWKKR 565
H N+I +L + P KSL D Y+ + ++ LD ++
Sbjct: 81 NHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+++ + G+ +L IIHRDLK SNI++ KI DFG+AR + T
Sbjct: 129 SYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MT 183
Query: 626 EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
VV T Y PE Y D++S G ++ ++I G
Sbjct: 184 PYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL--ILDWKKRVHIIEGITQ 574
VN L+++ D+ ++ EY P + F +R++ + R + Q
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYA----AQ 149
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
+L + L +I+RDLK N+++ + K++DFG A+ ++ T + GT Y
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 137
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y+
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLA 192
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 81
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 138
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 192
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+++ + K++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 152
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 118
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I+ + LD ++ +++ +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQ-MELDHERMSYLLYQMLC 175
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 229
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 262
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY+P + F +R++ H Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 152
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLA 207
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYL--------FDPIRKLILDWKKR 565
H N+I +L + P KSL D Y+ + ++ LD ++
Sbjct: 81 NHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+++ + G+ +L IIHRDLK SNI++ KI DFG+AR + T
Sbjct: 129 SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MT 183
Query: 626 EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
VV T Y PE Y D++S G ++ ++I G
Sbjct: 184 PYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 79
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 136
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 190
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 74
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 131
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 185
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 74
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 131
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 185
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYL--------FDPIRKLILDWKKR 565
H N+I +L + P KSL D Y+ + ++ LD ++
Sbjct: 81 NHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+++ + G+ +L IIHRDLK SNI++ KI DFG+AR + T
Sbjct: 129 SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MT 183
Query: 626 EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
VV T Y PE Y D++S G ++ ++I G
Sbjct: 184 PYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 520 VNL--IRVLGFCI-DSEERMLIYEYMPNKSLDCYLFDPIRKL--ILDWKKRVHIIEGITQ 574
VN + L F D+ ++ EY P + F +R++ + R + Q
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYA----AQ 150
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
+L + L +I+RDLK N+++ + K++DFG A+ ++ T + GT Y
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSL----DCYL--------FDPIRKLILDWKKR 565
H N+I +L + P KSL D Y+ + ++ LD ++
Sbjct: 81 NHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+++ + G+ +L IIHRDLK SNI++ KI DFG+AR + T
Sbjct: 129 SYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MT 183
Query: 626 EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
VV T Y PE Y D++S G ++ ++I G
Sbjct: 184 PYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 73
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 130
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 184
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 520 VNL--IRVLGFCI-DSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN + L F D+ ++ EY P + F +R++ H Q +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 152
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+++ + K++DFG A+ ++ T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y VL +A+KKLS+ T ++ E++L +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 81
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 138
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 192
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
E + +F+I K + G G Y + I ++LS +S +G EE + EV + ++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEY-----AAKFIKKRRLS-SSRRGVSREEIEREVNILREI 65
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+H N+I + + + +LI E + L +L + K L + ++ I G+
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVH 122
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E E + GT
Sbjct: 123 YLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH-----KIEAGNEFKNIFGT 174
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 520 VNL--IRVLGFCI-DSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN + L F D+ ++ EY P + F +R++ H Q +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 152
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+++ + K++DFG A+ ++ T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I GL +L + + II+RDLK N+LL + +ISD G+A ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + T VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVV-TRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y D++S G ++ ++I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I GL +L + + II+RDLK N+LL + +ISD G+A ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I GL +L + + II+RDLK N+LL + +ISD G+A ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 572 ITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGT 631
I GL +L + + II+RDLK N+LL + +ISD G+A ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISGK 665
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 124/317 (39%), Gaps = 59/317 (18%)
Query: 83 VKKKNPSITTILSIGQGKDTNYSIYSSMVRNSSHRKSFIDSSI------RIARLYG---- 132
+K KNP + ++S+G T +S + R+ + S I + G
Sbjct: 111 LKAKNPKLKVMISLGGW--TWSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGA 168
Query: 133 ------FRGLDFAWTAPNTST-----------DMFNIGLLFDEWRIAATKLDAKNSTRQQ 175
F G+D W P T++ D N L E+R +LDA ST +
Sbjct: 169 GAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFR---KQLDAYGSTNNK 225
Query: 176 SLLILTARFRYSP----------PAN--SYLLNSIQR-NLNWIHAVTASYYEPVSTNFTA 222
+L+A +P PAN S SIQ +L+ T + ++ + A
Sbjct: 226 KY-VLSAFLPANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPA 284
Query: 223 PPAALYGSISGRFARSTDQVLKAWIERGLSADKLVMCLPFYGYAWTLVKPEDNGIGAAAA 282
P A S +F S D+ +K ++ G+ +L + L YG WT K A
Sbjct: 285 DPRA----PSKKF--SADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDG 338
Query: 283 GPALYDSGLVTYKKIKNHIKTYGPDVQVMYNSTYEVNYFSTGTVWFGFDDVEAVRAKIAY 342
P Y++ Y K +KT G D Y++ + GT W+ +D++ + K Y
Sbjct: 339 APGTYETANEDYDK----LKTLGTD---HYDAATGSAWRYDGTQWWSYDNIATTKQKTDY 391
Query: 343 AKEKRLLGYYAWQVSFD 359
K L G W++S D
Sbjct: 392 IVSKGLGGGMWWELSGD 408
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + E V T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MEPEVVTRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISGKRL 667
PE Y D++S G ++ +++ K L
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 80
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 137
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + T VV T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVV-TRYY 191
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y D++S G ++ ++I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 460 EAATERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
E + +F+I K + G G Y + I ++LS +S +G EE + EV + ++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEY-----AAKFIKKRRLS-SSRRGVSREEIEREVNILREI 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
+H N+I + + + +LI E + L +L + K L + ++ I G+
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVH 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E E + GT
Sbjct: 130 YLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH-----KIEAGNEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 81
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 138
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + T VV T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVV-TRYY 192
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y D++S G ++ ++I G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
+ I +LG G + V K G+ + I K+ S+ S +G EE + EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVCREEIEREVSILRQV 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I + + + +LI E + L +L +K L ++ I+ I G+
Sbjct: 73 LHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E+ E + GT
Sbjct: 130 YLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 464 ERFSIRNKLGEGGYGPV---YKGVLPCGEVIAVKKLSK---TSTQGFEEFKNEVMLTAKL 517
+R+ +G G G V Y +L +A+KKLS+ T ++ E++L +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 82
Query: 518 QHVNLIRVLGFCIDS---EERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
H N+I +L EE +Y M + +D L I ++ LD ++ +++ +
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVI-QMELDHERMSYLLYQMLC 139
Query: 575 GLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGY 634
G+ +L IIHRDLK SNI++ KI DFG+AR + V T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MVPFVVTRYY 193
Query: 635 IPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y D++S G ++ ++I G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 461 AATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 519
A ++F LG G +G V + G A+K L K ++ ++ + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 520 VN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGL 576
VN L+++ D+ ++ EY P + F +R++ H Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPHARFYAAQIV 151
Query: 577 LYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIP 636
L + L +I+RDLK N+++ + +++DFG A+ ++ T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 637 PEYATKGVYSTKSDVFSFGVLLLQIISG 664
PE Y+ D ++ GVL+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
+ I +LG G + V K G+ + I K+ S+ S +G EE + EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQV 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I + + + +LI E + L +L +K L ++ I+ I G+
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E+ E + GT
Sbjct: 130 YLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
+ I +LG G + V K G+ + I K+ S+ S +G EE + EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQV 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I + + + +LI E + L +L +K L ++ I+ I G+
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E+ E + GT
Sbjct: 130 YLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 461 AATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
A ++F LG G +G V +K G A+K L K ++ ++ +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 517 LQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAA 148
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPE 203
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 461 AATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
A ++F LG G +G V +K G A+K L K ++ ++ +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 517 LQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAA 148
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPE 203
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 472 LGEGGYGPVYKGVLP-CGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLIRVLGFCI 530
LGEG + K V + AVK +SK + K L H N++++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHEVFH 76
Query: 531 DSEERMLIYEYMPNKSLDCYLFDPIRKLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIH 589
D L+ E + L F+ I+K + +I+ + + ++ + + ++H
Sbjct: 77 DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVH 129
Query: 590 RDLKVSNILL---GEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
RDLK N+L + ++ KI DFG AR+ K + + T+ Y PE + Y
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 647 TKSDVFSFGVLLLQIISGK 665
D++S GV+L ++SG+
Sbjct: 188 ESCDLWSLGVILYTMLSGQ 206
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVML 513
S A A ++F LG G +G V G A+K L K ++ ++ +
Sbjct: 25 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 514 TAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKL--ILDWKKRVHI 568
LQ VN L+++ D+ ++ EY+P + F +R++ + R +
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA 140
Query: 569 IEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQV 628
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T +
Sbjct: 141 ----AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 191
Query: 629 VGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
GT Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 461 AATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAK 516
A ++F LG G +G V +K G A+K L K ++ ++ +
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 517 LQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGIT 573
LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAA 148
Query: 574 QGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIG 633
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T + GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPE 203
Query: 634 YIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
+ I +LG G + V K G+ + I K+ S+ S +G EE + EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQV 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I + + + +LI E + L +L +K L ++ I+ I G+
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E+ E + GT
Sbjct: 130 YLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 15/214 (7%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPVY-KGVLPCGEVIAVKKLSKTSTQGFEEFKNEVML 513
S A A ++F LG G +G V G A+K L K ++ ++ +
Sbjct: 25 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 514 TAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIE 570
LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARF 138
Query: 571 GITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVG 630
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T + G
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 193
Query: 631 TIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
T Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
+ I +LG G + V K G+ + I K+ S+ S +G EE + EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQV 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I + + + +LI E + L +L +K L ++ I+ I G+
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E+ E + GT
Sbjct: 130 YLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGEVIAVKKLSKTSTQGFEEFKNEVMLTAKLQHVNLI 523
E++ I LG G +G V++ V + + K K K E+ + +H N++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 524 RVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYS 583
+ EE ++I+E++ LD + L+ ++ V + + + L +L ++
Sbjct: 65 HLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 584 RLTIIHRDLKVSNILLG--EAMKPKISDFGMARIFAKESLEENTEQVVGTIGYIPPEYAT 641
I H D++ NI+ + KI +FG AR +N + Y PE
Sbjct: 123 ---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP---GDNFRLLFTAPEYYAPEVHQ 176
Query: 642 KGVYSTKSDVFSFGVLLLQIISG 664
V ST +D++S G L+ ++SG
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSG 199
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 466 FSIRNKLGEGGYGPVYK------GVLPCGEVIAVKKLSKTSTQGF--EEFKNEVMLTAKL 517
+ I +LG G + V K G+ + I K+ S+ S +G EE + EV + ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQV 72
Query: 518 QHVNLIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLL 577
H N+I + + + +LI E + L +L +K L ++ I+ I G+
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVN 129
Query: 578 YLQEYSRLTIIHRDLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTE--QVVGT 631
YL I H DLK NI+L + P K+ DFG+A +E+ E + GT
Sbjct: 130 YLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGT 181
Query: 632 IGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
++ PE ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
S A A ++F LG G +G V +K G A+K L K ++ ++
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 511 VMLTAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
+ LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPH 143
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
S A A ++F LG G +G V +K G A+K L K ++ ++
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 511 VMLTAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
+ LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPH 143
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
S A A ++F LG G +G V +K G A+K L K ++ ++
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 511 VMLTAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
+ LQ VN L+++ D+ ++ EY P + F +R++ H
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRI--GRFSEPH 143
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
Q +L + L +I+RDLK N+++ + K++DFG A+ ++ T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWX 198
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
S A A ++F LG G +G V +K G A+K L K ++ ++
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 511 VMLTAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
+ LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPH 143
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 198
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 455 SLADIEAATERFSIRNKLGEGGYGPV----YKGVLPCGEVIAVKKLSKTSTQGFEEFKNE 510
S A A ++F LG G +G V +K G A+K L K ++ ++
Sbjct: 53 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHK---ETGNHYAMKILDKQKVVKLKQIEHT 109
Query: 511 VMLTAKLQHVN---LIRVLGFCIDSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVH 567
+ LQ VN L+++ D+ ++ EY+P + F +R++ H
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPH 163
Query: 568 IIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQ 627
Q +L + L +I+RDLK N+L+ + +++DFG A+ ++ T
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWX 218
Query: 628 VVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQIISG 664
+ GT Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 566 VHIIEGITQGLLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENT 625
+HI I + + +L ++HRDLK SNI K+ DFG+ ++ E+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 626 ----------EQVVGTIGYIPPEYATKGVYSTKSDVFSFGVLLLQII 662
VGT Y+ PE YS K D+FS G++L +++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 576 LLYLQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMARIFAKESLEENTEQVVGTIGYI 635
LL L ++H D+K +NI LG + K+ DFG+ E E G Y+
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYM 223
Query: 636 PPEYATKGVYSTKSDVFSFGVLLLQI 661
PE +G Y T +DVFS G+ +L++
Sbjct: 224 APEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 464 ERFSIRNKLGEGGYGPVYKGVLPCGE-VIAVKKLSKTSTQGFEEFKN------EVMLTAK 516
+R+ IR+ +G G YG V + + V+A+KK+ + FE+ + E+ + +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV----FEDLIDCKRILREIAILNR 108
Query: 517 LQHVNLIRVLGFCI--DSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQ 574
L H ++++VL I D E+ +Y + D +KL ++ V++ E +
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD------FKKL---FRTPVYLTELHIK 159
Query: 575 GLLY-----LQEYSRLTIIHRDLKVSNILLGEAMKPKISDFGMAR 614
LLY ++ I+HRDLK +N L+ + K+ DFG+AR
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 531 DSEERMLIYEYMPNKSLDCYLFDPIRKLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 590
++ E +LI EY + + +++ + + +I+ I +G+ YL + + I+H
Sbjct: 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSE-NDVIRLIKQILEGVYYLHQNN---IVHL 155
Query: 591 DLKVSNILLGEAMKP----KISDFGMARIFAKESLEENTEQVVGTIGYIPPEYATKGVYS 646
DLK NILL ++ P KI DFGM+R +++GT Y+ PE +
Sbjct: 156 DLKPQNILLS-SIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPIT 211
Query: 647 TKSDVFSFGVLLLQIIS 663
T +D+++ G++ +++
Sbjct: 212 TATDMWNIGIIAYMLLT 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,268,330
Number of Sequences: 62578
Number of extensions: 916881
Number of successful extensions: 4853
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 2318
Number of HSP's gapped (non-prelim): 1229
length of query: 785
length of database: 14,973,337
effective HSP length: 107
effective length of query: 678
effective length of database: 8,277,491
effective search space: 5612138898
effective search space used: 5612138898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)