Query 003934
Match_columns 785
No_of_seqs 77 out of 79
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 08:45:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e0m_A Wwprototype; SH3 protot 98.9 3.3E-10 1.1E-14 83.8 3.4 34 750-784 1-34 (37)
2 2jv4_A Peptidyl-prolyl CIS/tra 98.9 4E-10 1.4E-14 91.3 3.8 34 751-784 6-39 (54)
3 1wr4_A Ubiquitin-protein ligas 98.9 4.2E-10 1.4E-14 82.7 3.4 33 751-784 3-35 (36)
4 1wr3_A Ubiquitin-protein ligas 98.9 4.7E-10 1.6E-14 83.0 3.4 33 751-784 3-35 (36)
5 2kyk_A E3 ubiquitin-protein li 98.9 5.5E-10 1.9E-14 84.1 3.2 33 751-784 5-37 (39)
6 2ysh_A GAS-7, growth-arrest-sp 98.9 6.5E-10 2.2E-14 83.9 3.4 35 750-785 5-39 (40)
7 2dmv_A Itchy homolog E3 ubiqui 98.9 6.2E-10 2.1E-14 85.6 3.3 33 751-784 6-38 (43)
8 2law_A Yorkie homolog; YAP, SM 98.8 1.6E-09 5.4E-14 81.6 3.2 34 750-784 4-37 (38)
9 1ymz_A CC45; artificial protei 98.8 2.1E-09 7.2E-14 82.4 3.3 33 751-784 7-39 (43)
10 2jx8_A Hpcif1, phosphorylated 98.8 1.1E-09 3.9E-14 88.0 1.6 34 751-784 9-42 (52)
11 1wr7_A NEDD4-2; all-beta, liga 98.8 1.9E-09 6.6E-14 82.2 2.8 33 751-784 7-39 (41)
12 2ysg_A Syntaxin-binding protei 98.8 3E-09 1E-13 80.8 3.5 33 751-784 6-38 (40)
13 2l4j_A YES-associated protein 98.8 3.8E-09 1.3E-13 82.8 4.0 37 747-784 6-42 (46)
14 2ysf_A E3 ubiquitin-protein li 98.8 3.3E-09 1.1E-13 80.8 3.4 34 750-784 5-38 (40)
15 1i5h_W Rnedd4, ubiquitin ligas 98.8 3.3E-09 1.1E-13 84.5 3.2 33 751-784 10-42 (50)
16 2ez5_W Dnedd4, E3 ubiquitin-pr 98.7 5.2E-09 1.8E-13 82.0 3.8 35 749-784 7-41 (46)
17 2kpz_A E3 ubiquitin-protein li 98.7 4.7E-09 1.6E-13 83.0 3.1 33 751-784 11-43 (49)
18 2djy_A SMAD ubiquitination reg 98.7 5.6E-09 1.9E-13 80.5 3.4 32 752-784 7-38 (42)
19 2zaj_A Membrane-associated gua 98.7 4.6E-09 1.6E-13 83.7 2.9 33 751-784 12-44 (49)
20 2ysb_A Salvador homolog 1 prot 98.7 5.8E-09 2E-13 83.0 3.3 33 751-784 10-42 (49)
21 2ho2_A Fe65 protein, amyloid b 98.7 8.2E-09 2.8E-13 78.6 3.2 32 752-785 3-34 (38)
22 2ysc_A Amyloid beta A4 precurs 98.6 9.5E-09 3.2E-13 78.5 2.7 32 751-784 7-38 (39)
23 2dwv_A Salvador homolog 1 prot 98.6 1.2E-08 4.2E-13 81.1 3.1 33 751-784 12-44 (49)
24 2jmf_A E3 ubiquitin-protein li 98.6 1.7E-08 5.8E-13 81.5 3.4 33 751-784 17-49 (53)
25 2yse_A Membrane-associated gua 98.6 1.6E-08 5.6E-13 83.8 2.2 33 751-784 12-44 (60)
26 1e0n_A Hypothetical protein; Y 98.5 2.9E-08 9.9E-13 70.7 2.3 27 755-783 1-27 (27)
27 2ysd_A Membrane-associated gua 98.5 3.6E-08 1.2E-12 80.7 3.2 33 751-784 13-45 (57)
28 2kxq_A E3 ubiquitin-protein li 98.5 1.2E-08 4.1E-13 88.9 -0.1 68 707-784 8-86 (90)
29 1wmv_A WWOX, WW domain contain 98.5 5.2E-08 1.8E-12 78.8 3.5 34 750-784 9-42 (54)
30 1tk7_A CG4244-PB; WW domain, n 98.5 9.2E-09 3.1E-13 89.3 -1.2 71 703-784 7-87 (88)
31 2e45_A Fe65 protein, amyloid b 98.5 6.7E-08 2.3E-12 79.3 3.2 33 750-784 17-49 (55)
32 1jmq_A YAP65, 65 kDa YES-assoc 98.4 1.7E-07 6E-12 72.6 3.5 33 751-784 7-39 (46)
33 2ysi_A Transcription elongatio 98.4 2.2E-07 7.6E-12 71.0 3.5 35 750-785 5-39 (40)
34 2l5f_A PRE-mRNA-processing fac 98.3 2.4E-07 8.3E-12 81.1 3.0 36 748-784 7-42 (92)
35 1e0l_A Formin binding protein; 98.3 3.3E-07 1.1E-11 68.7 3.3 32 752-784 3-34 (37)
36 2kxq_A E3 ubiquitin-protein li 98.3 3.2E-07 1.1E-11 79.9 3.4 34 750-784 7-40 (90)
37 1ywi_A Formin-binding protein 98.2 3.4E-07 1.2E-11 70.2 2.4 32 752-784 9-40 (41)
38 1tk7_A CG4244-PB; WW domain, n 98.2 3.6E-07 1.2E-11 79.4 2.8 33 751-784 11-43 (88)
39 3l4h_A E3 ubiquitin-protein li 98.1 1.7E-06 5.8E-11 79.3 3.5 34 750-784 70-103 (109)
40 2jx8_A Hpcif1, phosphorylated 98.1 1.8E-06 6.3E-11 69.5 3.1 33 22-54 12-44 (52)
41 1o6w_A PRP40, PRE-mRNA process 98.0 1.6E-06 5.6E-11 72.5 1.4 32 752-784 40-71 (75)
42 2jxw_A WW domain-binding prote 97.9 3.7E-06 1.3E-10 71.0 2.8 32 752-784 43-74 (75)
43 2l5f_A PRE-mRNA-processing fac 97.8 5E-06 1.7E-10 72.8 2.1 65 706-784 9-83 (92)
44 1e0n_A Hypothetical protein; Y 97.8 9.8E-06 3.3E-10 57.7 2.9 27 23-51 1-27 (27)
45 2jv4_A Peptidyl-prolyl CIS/tra 97.7 1.2E-05 4.2E-10 65.1 2.9 36 21-56 8-43 (54)
46 1e0l_A Formin binding protein; 97.7 2.2E-05 7.4E-10 58.9 3.4 34 20-54 3-36 (37)
47 1o6w_A PRP40, PRE-mRNA process 97.7 1.6E-05 5.4E-10 66.5 2.5 29 755-784 2-30 (75)
48 2ysh_A GAS-7, growth-arrest-sp 97.6 2.7E-05 9.3E-10 58.6 2.8 32 20-52 7-38 (40)
49 2jxw_A WW domain-binding prote 97.6 2.4E-05 8.3E-10 66.0 2.4 29 755-784 5-33 (75)
50 1e0m_A Wwprototype; SH3 protot 97.5 5E-05 1.7E-09 56.0 3.0 32 21-53 4-35 (37)
51 1ymz_A CC45; artificial protei 97.5 5E-05 1.7E-09 58.1 3.0 34 21-55 9-42 (43)
52 2dk1_A WW domain-binding prote 97.4 5.1E-05 1.8E-09 60.9 2.5 29 755-784 7-35 (50)
53 1ywi_A Formin-binding protein 97.4 7.4E-05 2.5E-09 57.3 3.2 34 18-52 7-40 (41)
54 1wr3_A Ubiquitin-protein ligas 97.4 8.8E-05 3E-09 54.7 3.2 32 20-52 4-35 (36)
55 2ysi_A Transcription elongatio 97.4 0.00011 3.8E-09 56.1 3.5 33 21-54 8-40 (40)
56 2kyk_A E3 ubiquitin-protein li 97.2 0.00017 5.7E-09 54.2 3.1 35 17-52 3-37 (39)
57 2dmv_A Itchy homolog E3 ubiqui 97.1 0.00026 9E-09 54.4 3.2 34 20-54 7-40 (43)
58 1wr4_A Ubiquitin-protein ligas 97.1 0.00032 1.1E-08 51.3 3.0 31 21-52 5-35 (36)
59 2e45_A Fe65 protein, amyloid b 97.0 0.00032 1.1E-08 57.8 3.2 37 15-53 14-50 (55)
60 2dk1_A WW domain-binding prote 97.0 0.00017 5.9E-09 57.8 1.5 33 23-56 7-39 (50)
61 2ho2_A Fe65 protein, amyloid b 97.0 0.00033 1.1E-08 53.3 2.9 31 21-53 4-34 (38)
62 2ysc_A Amyloid beta A4 precurs 97.0 0.00036 1.2E-08 53.3 2.9 32 19-52 7-38 (39)
63 1wr7_A NEDD4-2; all-beta, liga 97.0 0.00037 1.3E-08 53.0 2.8 32 20-52 8-39 (41)
64 2law_A Yorkie homolog; YAP, SM 96.4 0.0018 6E-08 48.7 3.0 33 19-52 5-37 (38)
65 2dk7_A Transcription elongatio 96.4 0.0013 4.3E-08 56.9 2.4 28 756-784 21-48 (73)
66 2kpz_A E3 ubiquitin-protein li 96.3 0.0023 7.7E-08 50.6 3.0 36 18-54 10-45 (49)
67 2ysg_A Syntaxin-binding protei 96.2 0.0034 1.2E-07 47.6 3.7 33 19-52 6-38 (40)
68 1i5h_W Rnedd4, ubiquitin ligas 96.1 0.0032 1.1E-07 50.1 3.0 35 19-54 10-44 (50)
69 2zaj_A Membrane-associated gua 96.0 0.0064 2.2E-07 48.4 4.3 39 14-53 7-45 (49)
70 2ysf_A E3 ubiquitin-protein li 95.9 0.0048 1.6E-07 46.8 3.1 32 20-52 7-38 (40)
71 3tc5_A Peptidyl-prolyl CIS-tra 95.7 0.005 1.7E-07 58.9 3.1 36 20-55 9-44 (166)
72 2dwv_A Salvador homolog 1 prot 95.7 0.0067 2.3E-07 48.2 3.2 34 19-53 12-45 (49)
73 2l4j_A YES-associated protein 95.6 0.0065 2.2E-07 47.6 3.0 35 17-52 8-42 (46)
74 2djy_A SMAD ubiquitination reg 95.6 0.01 3.4E-07 45.7 3.8 34 19-53 6-39 (42)
75 2yse_A Membrane-associated gua 95.6 0.0083 2.8E-07 49.8 3.5 39 14-53 7-45 (60)
76 2ez5_W Dnedd4, E3 ubiquitin-pr 95.4 0.013 4.5E-07 45.8 4.0 33 20-53 10-42 (46)
77 2jmf_A E3 ubiquitin-protein li 95.3 0.012 4.2E-07 47.5 3.5 38 15-53 13-50 (53)
78 2ysb_A Salvador homolog 1 prot 94.9 0.023 8E-07 45.1 4.0 32 21-53 12-43 (49)
79 1wmv_A WWOX, WW domain contain 94.6 0.024 8.1E-07 45.9 3.5 38 17-55 8-45 (54)
80 2ysd_A Membrane-associated gua 94.3 0.034 1.2E-06 45.5 3.9 39 16-55 10-48 (57)
81 2dk7_A Transcription elongatio 94.3 0.028 9.7E-07 48.6 3.5 34 23-57 20-53 (73)
82 1jmq_A YAP65, 65 kDa YES-assoc 89.4 0.1 3.5E-06 40.2 1.0 35 19-54 7-41 (46)
83 3iot_A Maltose-binding protein 84.4 0.19 6.6E-06 52.2 0.0 16 246-261 272-288 (449)
84 1yw5_A Peptidyl prolyl CIS/tra 82.9 0.69 2.4E-05 44.1 3.1 33 21-53 8-40 (177)
85 3l4h_A E3 ubiquitin-protein li 78.4 1.3 4.3E-05 40.9 3.1 35 20-55 72-106 (109)
86 2v8f_C MDIA1, profilin IIA; al 69.9 2.3 8E-05 30.4 2.0 15 435-449 4-18 (26)
87 3le4_A Microprocessor complex 69.7 2.9 9.8E-05 36.7 3.0 31 752-783 28-58 (79)
88 3lvh_D LCB, clathrin light cha 68.4 2.3 7.8E-05 42.9 2.4 43 652-694 100-142 (205)
89 3lvg_D LCB, clathrin light cha 65.8 2.8 9.6E-05 41.6 2.4 43 652-694 85-127 (190)
90 3iot_A Maltose-binding protein 63.9 1.4 4.9E-05 45.7 0.0 7 462-468 428-434 (449)
91 1xi4_J LCA, clathrin light cha 50.2 15 0.00051 31.5 3.9 42 652-693 9-50 (70)
92 2zxq_A Endo-alpha-N-acetylgala 30.1 19 0.00066 44.7 2.1 26 33-58 706-731 (1376)
93 3ecq_A Protein SPR0328, endo-a 25.5 22 0.00077 44.2 1.5 26 32-57 943-968 (1531)
94 1eg3_A Dystrophin; EF-hand lik 24.1 37 0.0013 34.9 2.6 36 17-53 8-43 (261)
95 1jvr_A HTLV-II MA, MA, human T 24.0 1.3E+02 0.0044 28.6 5.9 12 441-452 110-121 (137)
96 3nr7_A DNA-binding protein H-N 22.2 82 0.0028 27.8 4.1 44 651-699 30-73 (86)
97 3olm_A E3 ubiquitin-protein li 21.0 22 0.00076 38.6 0.3 34 19-53 7-40 (429)
No 1
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.95 E-value=3.3e-10 Score=83.76 Aligned_cols=34 Identities=41% Similarity=0.812 Sum_probs=31.5
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
+.+||+||++++|+ +|++||+|+.|++|+|++|.
T Consensus 1 s~~LP~gW~~~~~~-~G~~Yy~n~~t~~t~W~~P~ 34 (37)
T 1e0m_A 1 SMGLPPGWDEYKTH-NGKTYYYNHNTKTSTWTDPR 34 (37)
T ss_dssp CCCSCTTEEEEECS-SCCEEEEETTTTEEESSCTT
T ss_pred CCCCCCCcEEEECC-CCCEEEEECCCCCeeeeCcC
Confidence 45899999999995 69999999999999999996
No 2
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.94 E-value=4e-10 Score=91.29 Aligned_cols=34 Identities=32% Similarity=0.715 Sum_probs=32.6
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|.++|++||+|+.|++|+|+||.
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~ 39 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPA 39 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCT
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCC
Confidence 4699999999999999999999999999999996
No 3
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=98.93 E-value=4.2e-10 Score=82.65 Aligned_cols=33 Identities=45% Similarity=0.827 Sum_probs=31.1
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||++++|+ +|++||+|+.|++|+|+||.
T Consensus 3 ~~LP~gWe~~~d~-~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 3 PGLPSGWEERKDA-KGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp TTCCTTEEEEECS-SSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEeCcCCC
Confidence 4799999999996 79999999999999999996
No 4
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=98.92 E-value=4.7e-10 Score=82.95 Aligned_cols=33 Identities=36% Similarity=0.762 Sum_probs=30.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||++++|+ +|++||+|+.|++|+|++|.
T Consensus 3 ~~LP~GWe~~~d~-~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 3 PPLPPGWEEKVDN-LGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp SCSCTTEEEEECS-SSCEEEEETTTCCEESSCSC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCEeeeCcC
Confidence 4699999999995 79999999999999999996
No 5
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=98.90 E-value=5.5e-10 Score=84.12 Aligned_cols=33 Identities=45% Similarity=0.887 Sum_probs=31.0
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||++++|+ +|++||+|+.|++|+|++|.
T Consensus 5 ~~LP~gWe~~~d~-~G~~YY~n~~t~~t~We~P~ 37 (39)
T 2kyk_A 5 GPLPPGWERRVDN-MGRIYYVDHFTRTTTWQRPT 37 (39)
T ss_dssp CCCCSSCEEEECT-TSCEEEECSSSCCEECCCCC
T ss_pred CCCCCCcEEEEcC-CCCEEEEECCCCCEeccCCC
Confidence 3699999999996 79999999999999999996
No 6
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.90 E-value=6.5e-10 Score=83.89 Aligned_cols=35 Identities=49% Similarity=0.951 Sum_probs=32.0
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPTK 785 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~~ 785 (785)
+.+||+||++++|+ +||+||+|+.|++|+|++|..
T Consensus 5 ~~~LP~gW~~~~d~-~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 5 SSGLPPGWQSYLSP-QGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CSSCCTTCEEEECT-TSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCceEEECC-CCCEEEEECCCCCEeCCCCCC
Confidence 35799999999997 799999999999999999963
No 7
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=6.2e-10 Score=85.64 Aligned_cols=33 Identities=36% Similarity=0.937 Sum_probs=31.2
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||++++|+ +||+||+|+.|++|+|+||.
T Consensus 6 ~~LP~GWe~~~d~-~Gr~YY~n~~t~~T~We~P~ 38 (43)
T 2dmv_A 6 SGLPPGWEQRVDQ-HGRVYYVDHVEKRTTWDRPS 38 (43)
T ss_dssp CSCCTTEEEEECT-TSCEEEEETTTCCEESSCSS
T ss_pred CCCCCCceEEECC-CCCEEEEECCCCCEecCCcC
Confidence 4799999999997 79999999999999999996
No 8
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=98.82 E-value=1.6e-09 Score=81.57 Aligned_cols=34 Identities=32% Similarity=0.707 Sum_probs=30.8
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..+||+||+.++| .+|++||+|+.|++|+|++|.
T Consensus 4 ~~~LP~gWe~~~~-~~G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 4 EGPLPDGWEQAMT-QDGEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp -CCCSSSCCEEEE-TTTEEEEEETTTTEEESSCTT
T ss_pred cCCCCCCcEEEEC-CCCCEEEEECCCCCEeCCCCC
Confidence 3479999999999 569999999999999999995
No 9
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.80 E-value=2.1e-09 Score=82.35 Aligned_cols=33 Identities=45% Similarity=0.800 Sum_probs=31.1
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|+ +||+||+|+.|++|+|++|.
T Consensus 7 ~~LP~gW~~~~~~-~Gr~YY~n~~T~~t~We~P~ 39 (43)
T 1ymz_A 7 MPLPPGWERRTDV-EGKVYYFNVRTLTTTWERPT 39 (43)
T ss_dssp CCCCSSEEEEECT-TSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCEEEECC-CCCEEEEECCCCCCcccCCc
Confidence 4799999999997 79999999999999999996
No 10
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.79 E-value=1.1e-09 Score=88.01 Aligned_cols=34 Identities=26% Similarity=0.740 Sum_probs=32.4
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..||+||++++|.++||+||+|..|++|+|++|.
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~ 42 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPV 42 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCC
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCC
Confidence 3699999999999999999999999999999996
No 11
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=98.79 E-value=1.9e-09 Score=82.16 Aligned_cols=33 Identities=27% Similarity=0.580 Sum_probs=30.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|+ +||+||+|+.|++|+|++|.
T Consensus 7 ~~LP~gWe~~~~~-~G~~Yy~n~~t~~t~We~Pr 39 (41)
T 1wr7_A 7 SFLPPGWEMRIAP-NGRPFFIDHNTKTTTWEDPR 39 (41)
T ss_dssp CSSCTTEEEEECT-TSCEEEEETTTTEEESSCGG
T ss_pred CCCCCCcEEEEcC-CCCEEEEECCCCCeecCCCC
Confidence 4799999999996 69999999999999999995
No 12
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.78 E-value=3e-09 Score=80.82 Aligned_cols=33 Identities=30% Similarity=0.751 Sum_probs=30.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++| .+||+||+|+.|++|+|++|.
T Consensus 6 ~~LP~gWe~~~~-~~Gr~Yy~nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 6 SGLPYGWEEAYT-ADGIKYFINHVTQTTSWIHPV 38 (40)
T ss_dssp SCCCTTEEEEEC-SSSCEEEEESSSCCEECCCCC
T ss_pred CCCCCCcEEEEc-CCCCEEEEECCCCcCcCCCCC
Confidence 469999999999 579999999999999999996
No 13
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=98.77 E-value=3.8e-09 Score=82.85 Aligned_cols=37 Identities=32% Similarity=0.631 Sum_probs=32.8
Q ss_pred cccCCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 747 VDLSKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 747 ~~ls~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.....+||+||+.++| .+|++||+|+.|++|+|++|.
T Consensus 6 ~~~~~~LP~gWe~~~~-~~G~~Yyinh~t~~TtWe~Pr 42 (46)
T 2l4j_A 6 SPASGPLPEGWEQAIT-PEGEIYYINHKNKTTSWLDPR 42 (46)
T ss_dssp STTTSCCCTTCEEEEC-TTSCEEEEETTTTEEECSCCS
T ss_pred CCcCCCCCcCceeEEC-CCCCEEEEECCCCCEeCCCCC
Confidence 3444579999999999 679999999999999999996
No 14
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.77 E-value=3.3e-09 Score=80.75 Aligned_cols=34 Identities=26% Similarity=0.547 Sum_probs=31.3
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
+.+||+||+.++| .+|++||+|+.|+.|+|++|.
T Consensus 5 ~~~LP~gWe~~~~-~~G~~Yy~nh~t~~ttw~~Pr 38 (40)
T 2ysf_A 5 SSGLPEGWEMRFT-VDGIPYFVDHNRRTTTYIDPR 38 (40)
T ss_dssp CCCCCSSEEEEEC-TTCCEEEEETTTCCEESSCTT
T ss_pred cCCCCcCcEEEEc-CCCCEEEEECCCCcEecCCCC
Confidence 3579999999999 579999999999999999996
No 15
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=98.75 E-value=3.3e-09 Score=84.47 Aligned_cols=33 Identities=27% Similarity=0.668 Sum_probs=30.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++| .+||+||+|+.|++|+|++|.
T Consensus 10 ~~LP~gWe~~~~-~~Gr~Yy~nh~t~~T~We~Pr 42 (50)
T 1i5h_W 10 GPLPPGWEERTH-TDGRVFFINHNIKKTQWEDPR 42 (50)
T ss_dssp SSCSTTEEEEEC-TTSCEEEEETTTTEEESSCTT
T ss_pred CCCCcCcEEEEc-CCCCEEEEECCCCCEEeeCCC
Confidence 369999999999 679999999999999999996
No 16
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=98.74 E-value=5.2e-09 Score=81.96 Aligned_cols=35 Identities=20% Similarity=0.522 Sum_probs=31.8
Q ss_pred cCCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 749 LSKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 749 ls~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
...+||+||+.++|+ +||+||+|+.|++|+|++|.
T Consensus 7 ~~~~LP~gWe~~~~~-~Gr~Yyinh~t~~TtW~~Pr 41 (46)
T 2ez5_W 7 EEEPLPPRWSMQVAP-NGRTFFIDHASRRTTWIDPR 41 (46)
T ss_dssp CSCCCCTTEEEEECT-TSSEEEEETTTTEEESBCTT
T ss_pred CCCCCCcCcEEEEcC-CCCEEEEECCCCCEeccCCC
Confidence 345799999999995 79999999999999999996
No 17
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=98.72 E-value=4.7e-09 Score=83.01 Aligned_cols=33 Identities=27% Similarity=0.593 Sum_probs=30.3
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++| .+|++||+|+.|++|+|++|.
T Consensus 11 ~~LP~gWe~~~~-~~G~~Yy~nh~T~~ttWe~Pr 43 (49)
T 2kpz_A 11 GFLPKGWEVRHA-PNGRPFFIDHNTKTTTWEDPR 43 (49)
T ss_dssp -CCCTTEEEEEC-TTSCEEEEETTTTEEESSCTT
T ss_pred CCCCCCcEEEEC-CCCCEEEEECCCCCEecCCCC
Confidence 469999999999 569999999999999999996
No 18
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.72 E-value=5.6e-09 Score=80.49 Aligned_cols=32 Identities=25% Similarity=0.610 Sum_probs=30.4
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
+||+||+.++| .+|++||+|+.|+.|+|++|.
T Consensus 7 ~LP~GWe~~~~-~~G~~Yy~nh~t~~ttW~~Pr 38 (42)
T 2djy_A 7 PLPPGWEIRNT-ATGRVYFVDHNNRTTQFTDPR 38 (42)
T ss_dssp CCCSSEEEEEC-SSSCEEEEETTTTEEESSCTT
T ss_pred CCCcCcEEEEC-CCCCEEEEECCCCCEeCCCCC
Confidence 69999999999 679999999999999999996
No 19
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=98.72 E-value=4.6e-09 Score=83.70 Aligned_cols=33 Identities=36% Similarity=0.728 Sum_probs=30.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|+ +||+||+|+.|+.|+|++|.
T Consensus 12 ~~LP~GWe~~~d~-~Gr~YYvnh~t~~T~We~P~ 44 (49)
T 2zaj_A 12 LELPAGWEKIEDP-VYGIYYVDHINRKTQYENPS 44 (49)
T ss_dssp SCCCTTEEEEEET-TTEEEEEETTTTEEESSCCC
T ss_pred CCCCcCceEEEcC-CCCEEEEeCCCCCEecCCCC
Confidence 4699999999995 69999999999999999996
No 20
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.71 E-value=5.8e-09 Score=82.95 Aligned_cols=33 Identities=33% Similarity=0.771 Sum_probs=31.0
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|+ +|++||+|+.|++|+|++|.
T Consensus 10 ~~LP~gWe~~~~~-~Gr~Yy~nh~t~~T~W~~P~ 42 (49)
T 2ysb_A 10 LPLPPGWSVDWTM-RGRKYYIDHNTNTTHWSHPL 42 (49)
T ss_dssp CCCCTTEEEEECS-SSCEEEEETTTTEEESSCTT
T ss_pred CCCCCCceEEECC-CCCEEEEEcCCCCEEecCCC
Confidence 4699999999997 69999999999999999996
No 21
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.68 E-value=8.2e-09 Score=78.55 Aligned_cols=32 Identities=41% Similarity=0.785 Sum_probs=29.7
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCCCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRPTK 785 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~~ 785 (785)
+||+||+.+.|. .| +||+|+.|++|+|+||+.
T Consensus 3 ~LP~GWe~~~d~-~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 3 DLPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp CSCTTEEEEECS-SC-EEEEETTTTEEESSCCCC
T ss_pred cCCCCceEEEeC-CC-CEEEecCCCCEeccCCCC
Confidence 699999999998 58 999999999999999963
No 22
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.65 E-value=9.5e-09 Score=78.54 Aligned_cols=32 Identities=38% Similarity=0.831 Sum_probs=29.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|++ |+ ||+|+.|++|+|+||.
T Consensus 7 ~~LP~GWe~~~~~~-G~-YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 7 GGLPPGWRKIHDAA-GT-YYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCTTEEEEEETT-EE-EEEESSSCCEESSCCC
T ss_pred CCCCCCcEEEEcCC-CC-EEEEcCCCCEeccCCC
Confidence 47999999999998 75 9999999999999996
No 23
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.63 E-value=1.2e-08 Score=81.09 Aligned_cols=33 Identities=21% Similarity=0.575 Sum_probs=31.2
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|+ .|++||+|+.|++|+|++|+
T Consensus 12 ~~LP~GWe~~~d~-~g~~YYvnh~t~~T~We~P~ 44 (49)
T 2dwv_A 12 EGLPPGWERVESS-EFGTYYVDHTNKRAQYRHPS 44 (49)
T ss_dssp SCCCTTEEEEEET-TTEEEEEETTTTEEESSCCC
T ss_pred CCCCcCcEEEECC-CCCEEEEECCCCCEeccCcC
Confidence 5799999999997 69999999999999999996
No 24
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=98.61 E-value=1.7e-08 Score=81.49 Aligned_cols=33 Identities=24% Similarity=0.619 Sum_probs=30.9
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++| .+|++||+|+.|++|+|++|.
T Consensus 17 ~~LP~GWe~~~~-~~Gr~Yyinh~tk~TtW~dPr 49 (53)
T 2jmf_A 17 GPLPPGWEIRYT-AAGERFFVDHNTRRTTFEDPR 49 (53)
T ss_dssp SCCCTTEEEEEC-TTSCEEEEETTTCCEESSCCC
T ss_pred CCCCcCcEEEEc-CCCCEEEEeCCCCcEecCCCC
Confidence 469999999999 579999999999999999996
No 25
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=1.6e-08 Score=83.76 Aligned_cols=33 Identities=36% Similarity=0.722 Sum_probs=30.6
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++| .+||+||+|+.|+.|+|++|.
T Consensus 12 ~~LP~GWE~~~d-~~Gr~YYvnh~tk~T~We~P~ 44 (60)
T 2yse_A 12 LELPAGWEKIED-PVYGIYYVDHINRKTQYENPV 44 (60)
T ss_dssp SSCCSSEEEEEC-SSSCEEEEETTTTEEESSCHH
T ss_pred CCCCCCcEEEEC-CCCCEEEEeCCCCCeeccCCC
Confidence 469999999999 569999999999999999994
No 26
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.53 E-value=2.9e-08 Score=70.66 Aligned_cols=27 Identities=19% Similarity=0.312 Sum_probs=26.0
Q ss_pred ccccccccCCCCceEEEeccccceeccCC
Q 003934 755 SGWQAYWDESSKQIYYGNTITSKTTWTRP 783 (785)
Q Consensus 755 ~gWqa~~D~~tg~vYY~N~~T~eTtW~RP 783 (785)
+||+ +|.++|+.||+|..|++|+|+||
T Consensus 1 ~gWe--~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE--IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE--EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe--EECCCCCeEEEECCCCCEeccCC
Confidence 5899 99999999999999999999998
No 27
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.53 E-value=3.6e-08 Score=80.70 Aligned_cols=33 Identities=27% Similarity=0.706 Sum_probs=30.8
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|. +||+||+|+.|+.|+|++|.
T Consensus 13 ~~LP~GWe~~~~~-~Gr~Yyinh~tk~TtWe~Pr 45 (57)
T 2ysd_A 13 GPLPENWEMAYTE-NGEVYFIDHNTKTTSWLDPR 45 (57)
T ss_dssp CSCCSSEEEEECS-SCCEEEEETTTTEEESSCTT
T ss_pred CCCCcCcEEEECC-CCCEEEEECCCCcEecCCCC
Confidence 3699999999996 79999999999999999995
No 28
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=98.51 E-value=1.2e-08 Score=88.91 Aligned_cols=68 Identities=16% Similarity=0.373 Sum_probs=47.6
Q ss_pred CCCChhHHHHHHHHHHH----------HhhhccCCCCCccccccccCCccc-ccCCCCCccccccccCCCCceEEEeccc
Q 003934 707 QPLGGDWREKVKRRRAQ----------LAKEAAETPPEAEADQKQEKPDLV-DLSKDLPSGWQAYWDESSKQIYYGNTIT 775 (785)
Q Consensus 707 ~PL~~DWReRVkrkr~r----------~~~e~~~~~~~~~~~~~~~~PdL~-~ls~~LP~gWqa~~D~~tg~vYY~N~~T 775 (785)
.+|+..|++|+.. .+| ++|+..... .. . -++. ....+||.||+.++| .+|++||+|+.|
T Consensus 8 ~~LP~gWe~~~~~-~Gr~YY~n~~t~~t~W~~P~~~-~~----~---~~~~~~~~~~LP~gWe~~~~-~~G~~Yy~n~~t 77 (90)
T 2kxq_A 8 PDLPEGYEQRTTQ-QGQVYFLHTQTGVSTWHDPRVP-RD----L---SNINCEELGPLPPGWEIRNT-ATGRVYFVDHNN 77 (90)
T ss_dssp CSCCSSCEEEEET-TTEEEEEETTTTEEESSCSSSC-SS----S---CSCCGGGTCCCCSSCCEEEC-TTSCEEEEETTT
T ss_pred CCCCCCcEEEECC-CCCEEEEECCCCeEeeeccccc-cc----c---cccCcccccccCCCceEEEC-CCCCEEEEECCC
Confidence 5799999999874 454 556521111 00 0 0011 122479999999999 569999999999
Q ss_pred cceeccCCC
Q 003934 776 SKTTWTRPT 784 (785)
Q Consensus 776 ~eTtW~RP~ 784 (785)
++|+|++|.
T Consensus 78 ~~t~w~~Pr 86 (90)
T 2kxq_A 78 RTTQFTDPR 86 (90)
T ss_dssp TEEESSCTT
T ss_pred CcEecCCCC
Confidence 999999996
No 29
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=98.50 E-value=5.2e-08 Score=78.85 Aligned_cols=34 Identities=35% Similarity=0.739 Sum_probs=31.2
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..+||.||+.++|+ +|++||+|+.|+.|+|++|.
T Consensus 9 ~~~LP~GWe~~~~~-~G~~Yyinh~tk~TtwedPr 42 (54)
T 1wmv_A 9 AGDLPYGWEQETDE-NGQVFFVDHINKRTTYLDPR 42 (54)
T ss_dssp SSCSCTTEEEEECT-TSCEEEEESSSCCEESSCTT
T ss_pred CCCCCcCcEEEECC-CCCEEEEeCCCCCEeecCCC
Confidence 34699999999995 79999999999999999995
No 30
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=98.49 E-value=9.2e-09 Score=89.30 Aligned_cols=71 Identities=20% Similarity=0.415 Sum_probs=49.3
Q ss_pred CCCCCCCChhHHHHHHHHHHH----------HhhhccCCCCCccccccccCCcccccCCCCCccccccccCCCCceEEEe
Q 003934 703 NANFQPLGGDWREKVKRRRAQ----------LAKEAAETPPEAEADQKQEKPDLVDLSKDLPSGWQAYWDESSKQIYYGN 772 (785)
Q Consensus 703 NaNF~PL~~DWReRVkrkr~r----------~~~e~~~~~~~~~~~~~~~~PdL~~ls~~LP~gWqa~~D~~tg~vYY~N 772 (785)
+....+|+..|++|+. ..|| ++|+........ .. .....+||.||+.++|+ .|++||+|
T Consensus 7 ~~~~~~LP~gWe~~~~-~~Gr~Yy~n~~t~~t~W~~P~~~~~~--------~~-~~~~~~LP~gWe~~~~~-~G~~Yy~n 75 (88)
T 1tk7_A 7 MDALGPLPDGWEKKIQ-SDNRVYFVNHKNRTTQWEDPRTQGQE--------VS-LINEGPLPPGWEIRYTA-AGERFFVD 75 (88)
T ss_dssp SSTTSSSSSSCCEEEE-TTTEEEEEETTTTEEEEESCCCTTTC--------CH-HHHSCSSCSSCEEEEET-TTEEEEEE
T ss_pred CCccCCCCCCcEEEEC-CCCCEEEEECCCCCeEeecccccccc--------cc-cccccccCCceEEEECC-CCCEEEEE
Confidence 3345679999999987 3444 556521111110 00 01235799999999995 59999999
Q ss_pred ccccceeccCCC
Q 003934 773 TITSKTTWTRPT 784 (785)
Q Consensus 773 ~~T~eTtW~RP~ 784 (785)
+.|++|+|++|.
T Consensus 76 h~t~~ttw~~Pr 87 (88)
T 1tk7_A 76 HNTRRTTFEDPR 87 (88)
T ss_dssp TTTTEEESSSSC
T ss_pred CCCCcEeCCCCC
Confidence 999999999995
No 31
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.46 E-value=6.7e-08 Score=79.32 Aligned_cols=33 Identities=39% Similarity=0.740 Sum_probs=30.5
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..+||+||++..|+ +| .||+|+.|+.|+|+||+
T Consensus 17 ~~~LPpGW~~~~D~-sG-tYY~h~~T~tTQWerP~ 49 (55)
T 2e45_A 17 DSDLPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPG 49 (55)
T ss_dssp CSCCCTTEEEEEET-TE-EEEEETTTCCEESSCCC
T ss_pred CCCCCCCCeEeecC-CC-CEEEEcCCCCCccCCCC
Confidence 34699999999999 68 99999999999999996
No 32
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.38 E-value=1.7e-07 Score=72.64 Aligned_cols=33 Identities=42% Similarity=0.767 Sum_probs=30.7
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+..+| .+||+||+|+.|+.|+|++|.
T Consensus 7 ~~LP~GWe~~~~-~~gr~y~~n~~t~~t~W~dPr 39 (46)
T 1jmq_A 7 VPLPAGWEMAKT-SSGQRYFKNHIDQTTTWQDPR 39 (46)
T ss_dssp CCCCTTBCCBCC-SSCCCBEEETTTTEEESSCTT
T ss_pred CCCCcCcEEEEc-CCCceEEEEecCCceeecCCC
Confidence 479999999999 569999999999999999995
No 33
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.35 E-value=2.2e-07 Score=71.03 Aligned_cols=35 Identities=26% Similarity=0.503 Sum_probs=31.2
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPTK 785 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~~ 785 (785)
..++|.+|+.+.++ .|+.||+|..|+|++|+||..
T Consensus 5 ~~~~~~~W~e~~~~-~G~~YYyN~~T~eS~We~P~~ 39 (40)
T 2ysi_A 5 SSGTEEIWVENKTP-DGKVYYYNARTRESAWTKPDG 39 (40)
T ss_dssp CCCCCCSEEEEECT-TSCEEEEETTTCCEESSCCSC
T ss_pred cCCCCCCCEEEECC-CCCEEEEECCCCCEEeCCCCC
Confidence 45799999999865 699999999999999999963
No 34
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=98.30 E-value=2.4e-07 Score=81.11 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=32.7
Q ss_pred ccCCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 748 DLSKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 748 ~ls~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..+.+||++|+.+.|+ .||+||+|+.|++|+|+||.
T Consensus 7 ~~~~~lp~~W~e~~~~-~Gr~YYyN~~T~~s~We~P~ 42 (92)
T 2l5f_A 7 GTASGAKSMWTEHKSP-DGRTYYYNTETKQSTWEKPD 42 (92)
T ss_dssp SSTTBTTTTEEEEECT-TSCEEEEETTTTEEESSCSG
T ss_pred CcCCCCCCCcEEEEcC-CCCEEEEECCCCceecccCc
Confidence 3455799999999999 79999999999999999995
No 35
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.30 E-value=3.3e-07 Score=68.75 Aligned_cols=32 Identities=31% Similarity=0.633 Sum_probs=29.8
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
....+|+.+.+++ |+.||+|..|++++|+||.
T Consensus 3 ~~~~~W~e~~~~~-G~~YYyN~~T~es~We~P~ 34 (37)
T 1e0l_A 3 TAVSEWTEYKTAD-GKTYYYNNRTLESTWEKPQ 34 (37)
T ss_dssp SSSCSCEEEECTT-SCEEEEETTTTEEESSCCS
T ss_pred CCCCCeEEEECCC-CCEEEEECCCCCEEecCCC
Confidence 4678999999998 9999999999999999996
No 36
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=98.29 E-value=3.2e-07 Score=79.90 Aligned_cols=34 Identities=32% Similarity=0.650 Sum_probs=31.3
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..+||+||+.++|+ .||+||+|+.|++|+|++|.
T Consensus 7 ~~~LP~gWe~~~~~-~Gr~YY~n~~t~~t~W~~P~ 40 (90)
T 2kxq_A 7 PPDLPEGYEQRTTQ-QGQVYFLHTQTGVSTWHDPR 40 (90)
T ss_dssp CCSCCSSCEEEEET-TTEEEEEETTTTEEESSCSS
T ss_pred CCCCCCCcEEEECC-CCCEEEEECCCCeEeeeccc
Confidence 34799999999996 69999999999999999995
No 37
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.24 E-value=3.4e-07 Score=70.24 Aligned_cols=32 Identities=31% Similarity=0.562 Sum_probs=27.1
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+|.+|+.+.++ .|+.||+|..|++++|++|.
T Consensus 9 ~~~~~W~e~~~~-~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 9 SAKSMWTEHKSP-DGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp ---CCEEEEEET-TTEEEEEETTTTEEEESCC-
T ss_pred CCCCCcEEEECC-CCCEEEEECCCCCEEeCCCC
Confidence 579999999998 69999999999999999996
No 38
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=98.24 E-value=3.6e-07 Score=79.35 Aligned_cols=33 Identities=27% Similarity=0.713 Sum_probs=30.6
Q ss_pred CCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 751 KDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 751 ~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+||+||+.++|+ +||+||+|+.|++|+|++|.
T Consensus 11 ~~LP~gWe~~~~~-~Gr~Yy~n~~t~~t~W~~P~ 43 (88)
T 1tk7_A 11 GPLPDGWEKKIQS-DNRVYFVNHKNRTTQWEDPR 43 (88)
T ss_dssp SSSSSSCCEEEET-TTEEEEEETTTTEEEEESCC
T ss_pred CCCCCCcEEEECC-CCCEEEEECCCCCeEeeccc
Confidence 3699999999995 69999999999999999996
No 39
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=98.07 E-value=1.7e-06 Score=79.31 Aligned_cols=34 Identities=24% Similarity=0.541 Sum_probs=31.4
Q ss_pred CCCCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 750 SKDLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 750 s~~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..+||+||+..+|+ +|++||+|+.|+.|||++|.
T Consensus 70 ~~pLP~GWE~r~d~-~Gr~YfIdH~tktTtW~dPR 103 (109)
T 3l4h_A 70 RLELPRGWEIKTDQ-QGKSFFVDHNSRATTFIDPR 103 (109)
T ss_dssp TSCCCTTEEEEECT-TCCEEEEETTTTEEESSCSC
T ss_pred CCCCCCCCeEEECC-CCCEEEEeCCCCCEeeCCCC
Confidence 34699999999999 79999999999999999995
No 40
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.05 E-value=1.8e-06 Score=69.45 Aligned_cols=33 Identities=27% Similarity=0.656 Sum_probs=30.6
Q ss_pred cCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 22 SSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 22 ~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
-.||+++++..+|++||+|+.||++.||.|..-
T Consensus 12 P~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 12 HAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 468999999999999999999999999999764
No 41
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=97.97 E-value=1.6e-06 Score=72.47 Aligned_cols=32 Identities=34% Similarity=0.647 Sum_probs=29.8
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.||.||+.++|+. ||+||+|+.|++|+|++|.
T Consensus 40 ~lp~gW~~~~~~~-Gr~Yy~n~~t~~t~W~~P~ 71 (75)
T 1o6w_A 40 LRENGWKAAKTAD-GKVYYYNPTTRETSWTIPA 71 (75)
T ss_dssp HHHHTCEEEECTT-CCEEEEETTTTEEESSCCC
T ss_pred CCCCeEEEEECCC-CCEEEEECCCCCEECCCCC
Confidence 4899999999975 9999999999999999996
No 42
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=97.93 E-value=3.7e-06 Score=70.96 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=30.4
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.||.+|+.+.|+ .||+||+|..|++|+|++|.
T Consensus 43 ~~~~~W~~~~~~-~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 43 AVKTVWVEGLSE-DGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp SCCCSEEEEEET-TTEEEEEETTTTEEESSCCC
T ss_pred CCCccEEEEECC-CCCEEEEECcCCCEeccCcC
Confidence 689999999999 69999999999999999996
No 43
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=97.83 E-value=5e-06 Score=72.80 Aligned_cols=65 Identities=18% Similarity=0.360 Sum_probs=45.8
Q ss_pred CCCCChhHHHHHHHHHHH----------HhhhccCCCCCccccccccCCcccccCCCCCccccccccCCCCceEEEeccc
Q 003934 706 FQPLGGDWREKVKRRRAQ----------LAKEAAETPPEAEADQKQEKPDLVDLSKDLPSGWQAYWDESSKQIYYGNTIT 775 (785)
Q Consensus 706 F~PL~~DWReRVkrkr~r----------~~~e~~~~~~~~~~~~~~~~PdL~~ls~~LP~gWqa~~D~~tg~vYY~N~~T 775 (785)
-.+|+..|++++.+ .|| ++|+.......+ . + ...||.+|+.+.++ .||+||+|+.|
T Consensus 9 ~~~lp~~W~e~~~~-~Gr~YYyN~~T~~s~We~P~~~~~~----~-------e-~~~~~~~W~~~~~~-~Gr~Yy~N~~T 74 (92)
T 2l5f_A 9 ASGAKSMWTEHKSP-DGRTYYYNTETKQSTWEKPDDLKTP----A-------E-QLLSKCPWKEYKSD-SGKTYYYNSQT 74 (92)
T ss_dssp TTBTTTTEEEEECT-TSCEEEEETTTTEEESSCSGGGTCH----H-------H-HHHHSCSEEEEECT-TCCEEEEETTT
T ss_pred CCCCCCCcEEEEcC-CCCEEEEECCCCceecccCcccccc----c-------c-ccccccceEEEECC-CCCEEEEECCC
Confidence 35688999999986 454 556521110000 0 0 02489999999887 69999999999
Q ss_pred cceeccCCC
Q 003934 776 SKTTWTRPT 784 (785)
Q Consensus 776 ~eTtW~RP~ 784 (785)
++|+|++|.
T Consensus 75 ~~s~We~P~ 83 (92)
T 2l5f_A 75 KESRWAKPK 83 (92)
T ss_dssp TEEESCCCH
T ss_pred CCeeccCch
Confidence 999999994
No 44
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=97.81 E-value=9.8e-06 Score=57.70 Aligned_cols=27 Identities=26% Similarity=0.521 Sum_probs=25.2
Q ss_pred CCceEEEeccCcceEEEEccccccccccC
Q 003934 23 SGWRMVLHEESKQYYYWNVETGETSWEIP 51 (785)
Q Consensus 23 ~~w~~~~~e~s~~~yywn~~tgetswe~p 51 (785)
.||+ ++..+|+.||.|+.|||+.||.|
T Consensus 1 ~gWe--~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE--IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE--EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe--EECCCCCeEEEECCCCCEeccCC
Confidence 3799 78899999999999999999988
No 45
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=97.75 E-value=1.2e-05 Score=65.11 Aligned_cols=36 Identities=28% Similarity=0.593 Sum_probs=32.2
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCccccc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQVLAQ 56 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~~ 56 (785)
+-.||+++++..+|+.||+|..||++.||.|...+.
T Consensus 8 LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~~~ 43 (54)
T 2jv4_A 8 LPAGWEVRHSNSKNLPYYFNPATRESRWEPPADTDM 43 (54)
T ss_dssp CCSSCCEEECSSSSCEEEEETTTTEEESSCCTTSCH
T ss_pred CCCCcEEEEECCCCCEEEEECCCCcEEecCCCCccH
Confidence 557899999999999999999999999999986543
No 46
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=97.70 E-value=2.2e-05 Score=58.91 Aligned_cols=34 Identities=35% Similarity=0.635 Sum_probs=30.4
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
....+|+...... |+.||+|+.|||++||.|..|
T Consensus 3 ~~~~~W~e~~~~~-G~~YYyN~~T~es~We~P~~~ 36 (37)
T 1e0l_A 3 TAVSEWTEYKTAD-GKTYYYNNRTLESTWEKPQEL 36 (37)
T ss_dssp SSSCSCEEEECTT-SCEEEEETTTTEEESSCCSSC
T ss_pred CCCCCeEEEECCC-CCEEEEECCCCCEEecCCCcc
Confidence 3467899999887 999999999999999999876
No 47
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=97.67 E-value=1.6e-05 Score=66.51 Aligned_cols=29 Identities=48% Similarity=0.850 Sum_probs=27.2
Q ss_pred ccccccccCCCCceEEEeccccceeccCCC
Q 003934 755 SGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 755 ~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
++|+.+.|+ .||+||+|+.|++|+|++|.
T Consensus 2 ~~W~~~~~~-~Gr~YY~n~~T~~s~W~~P~ 30 (75)
T 1o6w_A 2 SIWKEAKDA-SGRIYYYNTLTKKSTWEKPK 30 (75)
T ss_dssp CCEEEEECT-TCCEEEEETTTTEEESSCCH
T ss_pred CCCeEEECC-CCCeEEEECCCCCEEeecch
Confidence 589999999 79999999999999999994
No 48
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=97.60 E-value=2.7e-05 Score=58.61 Aligned_cols=32 Identities=38% Similarity=0.781 Sum_probs=28.8
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
.+-.||+++++. +|++||||..|++|.||-|.
T Consensus 7 ~LP~gW~~~~d~-~Gr~YY~n~~T~~t~We~P~ 38 (40)
T 2ysh_A 7 GLPPGWQSYLSP-QGRRYYVNTTTNETTWERPS 38 (40)
T ss_dssp SCCTTCEEEECT-TSCEEEECSSSCCEESSSCC
T ss_pred CCCCCceEEECC-CCCEEEEECCCCCEeCCCCC
Confidence 456799999995 89999999999999999995
No 49
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=97.58 E-value=2.4e-05 Score=65.98 Aligned_cols=29 Identities=21% Similarity=0.524 Sum_probs=27.4
Q ss_pred ccccccccCCCCceEEEeccccceeccCCC
Q 003934 755 SGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 755 ~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
.+|..+.|++ |++||+|+.|++|+|++|.
T Consensus 5 ~~W~e~~~~~-G~~YYyN~~T~~s~We~P~ 33 (75)
T 2jxw_A 5 GRWVEGITSE-GYHYYYDLISGASQWEKPE 33 (75)
T ss_dssp CCEEEEEETT-TEEEEEETTTTEEECSCCS
T ss_pred CCcEEEECCC-CCEEEEECCCCCEeecCCC
Confidence 5899999997 9999999999999999995
No 50
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=97.51 E-value=5e-05 Score=55.98 Aligned_cols=32 Identities=25% Similarity=0.678 Sum_probs=28.2
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
.-.||++..+ .+|+.||+|..|++|+||-|..
T Consensus 4 LP~gW~~~~~-~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 4 LPPGWDEYKT-HNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp SCTTEEEEEC-SSCCEEEEETTTTEEESSCTTT
T ss_pred CCCCcEEEEC-CCCCEEEEECCCCCeeeeCcCC
Confidence 3568999988 5899999999999999999963
No 51
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=97.49 E-value=5e-05 Score=58.06 Aligned_cols=34 Identities=32% Similarity=0.719 Sum_probs=29.9
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCcccc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQVLA 55 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~ 55 (785)
.-.||+++.+. +|++||+|..|++|+||-|..|.
T Consensus 9 LP~gW~~~~~~-~Gr~YY~n~~T~~t~We~P~~~~ 42 (43)
T 1ymz_A 9 LPPGWERRTDV-EGKVYYFNVRTLTTTWERPTIIL 42 (43)
T ss_dssp CCSSEEEEECT-TSCEEEEETTTTEEESSCCCSCC
T ss_pred CCCCCEEEECC-CCCEEEEECCCCCCcccCCcccc
Confidence 45689999995 89999999999999999998653
No 52
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.44 E-value=5.1e-05 Score=60.89 Aligned_cols=29 Identities=21% Similarity=0.524 Sum_probs=26.9
Q ss_pred ccccccccCCCCceEEEeccccceeccCCC
Q 003934 755 SGWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 755 ~gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
..|..+.++. |+.||+|..|++++|+||.
T Consensus 7 ~~W~e~~s~~-G~~YYyN~~T~eS~WekP~ 35 (50)
T 2dk1_A 7 GRWVEGITSE-GYHYYYDLISGASQWEKPE 35 (50)
T ss_dssp CCEEECCCST-TCCCEEESSSCCEESSCCT
T ss_pred CCeEEEECCC-CCEEEEECCCCCEEeeCCh
Confidence 3699999996 9999999999999999995
No 53
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=97.44 E-value=7.4e-05 Score=57.32 Aligned_cols=34 Identities=32% Similarity=0.713 Sum_probs=26.3
Q ss_pred eccccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 18 IGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 18 ~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
+++...+|+..... .|+.||+|++|||+.||.|.
T Consensus 7 ~~~~~~~W~e~~~~-~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 7 VGSAKSMWTEHKSP-DGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp -----CCEEEEEET-TTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCCcEEEECC-CCCEEEEECCCCCEEeCCCC
Confidence 45557799998877 79999999999999999995
No 54
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=97.40 E-value=8.8e-05 Score=54.67 Aligned_cols=32 Identities=25% Similarity=0.594 Sum_probs=28.5
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
..-.||+++.+ .+|+.||+|..|++|+||-|.
T Consensus 4 ~LP~GWe~~~d-~~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 4 PLPPGWEEKVD-NLGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp CSCTTEEEEEC-SSSCEEEEETTTCCEESSCSC
T ss_pred CCCCCCEEEEC-CCCCEEEEECCCCCEeeeCcC
Confidence 34578999998 699999999999999999985
No 55
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=97.37 E-value=0.00011 Score=56.14 Aligned_cols=33 Identities=24% Similarity=0.523 Sum_probs=28.6
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
...+|+... -..|+.||+|++|||+.||.|..|
T Consensus 8 ~~~~W~e~~-~~~G~~YYyN~~T~eS~We~P~~~ 40 (40)
T 2ysi_A 8 TEEIWVENK-TPDGKVYYYNARTRESAWTKPDGV 40 (40)
T ss_dssp CCCSEEEEE-CTTSCEEEEETTTCCEESSCCSCC
T ss_pred CCCCCEEEE-CCCCCEEEEECCCCCEEeCCCCCC
Confidence 457899988 568999999999999999999764
No 56
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=97.24 E-value=0.00017 Score=54.23 Aligned_cols=35 Identities=26% Similarity=0.627 Sum_probs=30.6
Q ss_pred eeccccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 17 VIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 17 ~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
+.+..-.||++.++ .+|+.||+|..|++|+||-|.
T Consensus 3 ~~~~LP~gWe~~~d-~~G~~YY~n~~t~~t~We~P~ 37 (39)
T 2kyk_A 3 AMGPLPPGWERRVD-NMGRIYYVDHFTRTTTWQRPT 37 (39)
T ss_dssp SSCCCCSSCEEEEC-TTSCEEEECSSSCCEECCCCC
T ss_pred ccCCCCCCcEEEEc-CCCCEEEEECCCCCEeccCCC
Confidence 34566789999999 599999999999999999985
No 57
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.12 E-value=0.00026 Score=54.37 Aligned_cols=34 Identities=21% Similarity=0.541 Sum_probs=30.0
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
.+-.||+++.+. +|+.||+|..|++|+||-|..-
T Consensus 7 ~LP~GWe~~~d~-~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 7 GLPPGWEQRVDQ-HGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp SCCTTEEEEECT-TSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCceEEECC-CCCEEEEECCCCCEecCCcCCC
Confidence 356799999996 8999999999999999999753
No 58
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=97.05 E-value=0.00032 Score=51.25 Aligned_cols=31 Identities=29% Similarity=0.592 Sum_probs=27.7
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
.-.||++..+. +|+.||+|..|++|+||-|.
T Consensus 5 LP~gWe~~~d~-~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 5 LPSGWEERKDA-KGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp CCTTEEEEECS-SSCEEEEETTTTEEESSCCC
T ss_pred CCCCCEEEECC-CCCEEEEECCCCCEeCcCCC
Confidence 35689999995 89999999999999999884
No 59
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.05 E-value=0.00032 Score=57.77 Aligned_cols=37 Identities=38% Similarity=0.821 Sum_probs=31.4
Q ss_pred ceeeccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 15 IQVIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 15 ~Q~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
++-..+.--||+++.|. +| -||||..||.|-||.|..
T Consensus 14 ~~~~~~LPpGW~~~~D~-sG-tYY~h~~T~tTQWerP~~ 50 (55)
T 2e45_A 14 FETDSDLPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPGR 50 (55)
T ss_dssp TCSCSCCCTTEEEEEET-TE-EEEEETTTCCEESSCCCC
T ss_pred ccCCCCCCCCCeEeecC-CC-CEEEEcCCCCCccCCCCC
Confidence 33445567899999999 88 999999999999999964
No 60
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.03 E-value=0.00017 Score=57.84 Aligned_cols=33 Identities=24% Similarity=0.616 Sum_probs=29.9
Q ss_pred CCceEEEeccCcceEEEEccccccccccCccccc
Q 003934 23 SGWRMVLHEESKQYYYWNVETGETSWEIPQVLAQ 56 (785)
Q Consensus 23 ~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~~ 56 (785)
+.|...+..+ |+.||+|++|||..||.|..|..
T Consensus 7 ~~W~e~~s~~-G~~YYyN~~T~eS~WekP~~~~~ 39 (50)
T 2dk1_A 7 GRWVEGITSE-GYHYYYDLISGASQWEKPEGFQG 39 (50)
T ss_dssp CCEEECCCST-TCCCEEESSSCCEESSCCTTCCC
T ss_pred CCeEEEECCC-CCEEEEECCCCCEEeeCChhhhh
Confidence 5799998885 99999999999999999999876
No 61
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=97.03 E-value=0.00033 Score=53.34 Aligned_cols=31 Identities=42% Similarity=0.936 Sum_probs=27.3
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
.-.||+++++. +| .||||..|++|.||-|..
T Consensus 4 LP~GWe~~~d~-~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 4 LPAGWMRVQDT-SG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp SCTTEEEEECS-SC-EEEEETTTTEEESSCCCC
T ss_pred CCCCceEEEeC-CC-CEEEecCCCCEeccCCCC
Confidence 45689999997 77 999999999999999963
No 62
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=96.99 E-value=0.00036 Score=53.34 Aligned_cols=32 Identities=38% Similarity=1.040 Sum_probs=27.8
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
...-.||+++.+.+ |. ||||..|++|.||-|.
T Consensus 7 ~~LP~GWe~~~~~~-G~-YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 7 GGLPPGWRKIHDAA-GT-YYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCTTEEEEEETT-EE-EEEESSSCCEESSCCC
T ss_pred CCCCCCcEEEEcCC-CC-EEEEcCCCCEeccCCC
Confidence 35678999999977 75 9999999999999985
No 63
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=96.98 E-value=0.00037 Score=53.05 Aligned_cols=32 Identities=25% Similarity=0.617 Sum_probs=28.7
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
.+-.||++.++ .+|+.||+|..|++|+||-|.
T Consensus 8 ~LP~gWe~~~~-~~G~~Yy~n~~t~~t~We~Pr 39 (41)
T 1wr7_A 8 FLPPGWEMRIA-PNGRPFFIDHNTKTTTWEDPR 39 (41)
T ss_dssp SSCTTEEEEEC-TTSCEEEEETTTTEEESSCGG
T ss_pred CCCCCcEEEEc-CCCCEEEEECCCCCeecCCCC
Confidence 45679999999 579999999999999999885
No 64
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=96.42 E-value=0.0018 Score=48.67 Aligned_cols=33 Identities=30% Similarity=0.717 Sum_probs=29.1
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
+..-.||++.++ .+|+.||.|..|++|+||-|.
T Consensus 5 ~~LP~gWe~~~~-~~G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 5 GPLPDGWEQAMT-QDGEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp CCCSSSCCEEEE-TTTEEEEEETTTTEEESSCTT
T ss_pred CCCCCCcEEEEC-CCCCEEEEECCCCCEeCCCCC
Confidence 345679999999 689999999999999999884
No 65
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.41 E-value=0.0013 Score=56.94 Aligned_cols=28 Identities=25% Similarity=0.786 Sum_probs=25.2
Q ss_pred cccccccCCCCceEEEeccccceeccCCC
Q 003934 756 GWQAYWDESSKQIYYGNTITSKTTWTRPT 784 (785)
Q Consensus 756 gWqa~~D~~tg~vYY~N~~T~eTtW~RP~ 784 (785)
-|..++-.. ||+||||..|+++.|++|.
T Consensus 21 ~W~~v~T~d-GR~fyyN~~Tk~S~WekP~ 48 (73)
T 2dk7_A 21 PWCVVWTGD-ERVFFYNPTTRLSMWDRPD 48 (73)
T ss_dssp SCEEEEESS-SCEEEEETTTTEECSSCCT
T ss_pred CcEEEECCC-CCEEEecCcccceeccCCh
Confidence 599998554 9999999999999999995
No 66
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=96.28 E-value=0.0023 Score=50.57 Aligned_cols=36 Identities=22% Similarity=0.518 Sum_probs=30.2
Q ss_pred eccccCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 18 IGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 18 ~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
.+..-.||++..+ .+|+.||.|..|++|+||-|...
T Consensus 10 ~~~LP~gWe~~~~-~~G~~Yy~nh~T~~ttWe~Pr~~ 45 (49)
T 2kpz_A 10 QGFLPKGWEVRHA-PNGRPFFIDHNTKTTTWEDPRLK 45 (49)
T ss_dssp --CCCTTEEEEEC-TTSCEEEEETTTTEEESSCTTCC
T ss_pred CCCCCCCcEEEEC-CCCCEEEEECCCCCEecCCCCCC
Confidence 3456789999999 68999999999999999999653
No 67
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=96.23 E-value=0.0034 Score=47.55 Aligned_cols=33 Identities=27% Similarity=0.483 Sum_probs=29.2
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
...-.||++.++ .+|+.||-|..|++|+||-|.
T Consensus 6 ~~LP~gWe~~~~-~~Gr~Yy~nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 6 SGLPYGWEEAYT-ADGIKYFINHVTQTTSWIHPV 38 (40)
T ss_dssp SCCCTTEEEEEC-SSSCEEEEESSSCCEECCCCC
T ss_pred CCCCCCcEEEEc-CCCCEEEEECCCCcCcCCCCC
Confidence 345679999998 789999999999999999885
No 68
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=96.08 E-value=0.0032 Score=50.08 Aligned_cols=35 Identities=26% Similarity=0.634 Sum_probs=30.2
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
+..-.||++.++ .+|+.||.|..|++|+||-|...
T Consensus 10 ~~LP~gWe~~~~-~~Gr~Yy~nh~t~~T~We~Pr~~ 44 (50)
T 1i5h_W 10 GPLPPGWEERTH-TDGRVFFINHNIKKTQWEDPRMQ 44 (50)
T ss_dssp SSCSTTEEEEEC-TTSCEEEEETTTTEEESSCTTTS
T ss_pred CCCCcCcEEEEc-CCCCEEEEECCCCCEEeeCCCCC
Confidence 345679999998 78999999999999999999653
No 69
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=95.99 E-value=0.0064 Score=48.45 Aligned_cols=39 Identities=18% Similarity=0.348 Sum_probs=32.1
Q ss_pred CceeeccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 14 AIQVIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 14 ~~Q~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
+.+-....-.||+++.+ .+|+.||.|..|+.|+||-|..
T Consensus 7 ~~~~~~~LP~GWe~~~d-~~Gr~YYvnh~t~~T~We~P~~ 45 (49)
T 2zaj_A 7 GLDSELELPAGWEKIED-PVYGIYYVDHINRKTQYENPSG 45 (49)
T ss_dssp CCCCSSCCCTTEEEEEE-TTTEEEEEETTTTEEESSCCCS
T ss_pred ccCCCCCCCcCceEEEc-CCCCEEEEeCCCCCEecCCCCC
Confidence 33444556789999999 5799999999999999999964
No 70
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=95.89 E-value=0.0048 Score=46.84 Aligned_cols=32 Identities=19% Similarity=0.428 Sum_probs=28.7
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
..-.||++.++ .+|+.||.|..|++|+||-|.
T Consensus 7 ~LP~gWe~~~~-~~G~~Yy~nh~t~~ttw~~Pr 38 (40)
T 2ysf_A 7 GLPEGWEMRFT-VDGIPYFVDHNRRTTTYIDPR 38 (40)
T ss_dssp CCCSSEEEEEC-TTCCEEEEETTTCCEESSCTT
T ss_pred CCCcCcEEEEc-CCCCEEEEECCCCcEecCCCC
Confidence 35679999999 789999999999999999885
No 71
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=95.70 E-value=0.005 Score=58.92 Aligned_cols=36 Identities=28% Similarity=0.636 Sum_probs=29.4
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCcccc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVLA 55 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~ 55 (785)
..--||+++++..+|+.||+|..|++|.||-|..-+
T Consensus 9 ~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~~ 44 (166)
T 3tc5_A 9 KLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNS 44 (166)
T ss_dssp -CCTTEEEEECTTTCCEEEEETTTCCEESSCC----
T ss_pred CCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCCc
Confidence 456799999999999999999999999999996544
No 72
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=95.66 E-value=0.0067 Score=48.21 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=29.5
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
+..--||+++.+. .|+.||.|..|++|.||-|..
T Consensus 12 ~~LP~GWe~~~d~-~g~~YYvnh~t~~T~We~P~~ 45 (49)
T 2dwv_A 12 EGLPPGWERVESS-EFGTYYVDHTNKRAQYRHPSG 45 (49)
T ss_dssp SCCCTTEEEEEET-TTEEEEEETTTTEEESSCCCC
T ss_pred CCCCcCcEEEECC-CCCEEEEECCCCCEeccCcCC
Confidence 3456799999996 789999999999999999964
No 73
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=95.65 E-value=0.0065 Score=47.58 Aligned_cols=35 Identities=29% Similarity=0.634 Sum_probs=30.7
Q ss_pred eeccccCCceEEEeccCcceEEEEccccccccccCc
Q 003934 17 VIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQ 52 (785)
Q Consensus 17 ~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~ 52 (785)
..+..-.||++.++ .+|+.||.|..|++|+||-|.
T Consensus 8 ~~~~LP~gWe~~~~-~~G~~Yyinh~t~~TtWe~Pr 42 (46)
T 2l4j_A 8 ASGPLPEGWEQAIT-PEGEIYYINHKNKTTSWLDPR 42 (46)
T ss_dssp TTSCCCTTCEEEEC-TTSCEEEEETTTTEEECSCCS
T ss_pred cCCCCCcCceeEEC-CCCCEEEEECCCCCEeCCCCC
Confidence 34557789999999 789999999999999999885
No 74
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=95.58 E-value=0.01 Score=45.72 Aligned_cols=34 Identities=18% Similarity=0.509 Sum_probs=29.9
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
+..-.||++.++ .+|+.||-|..|++|+||-|..
T Consensus 6 ~~LP~GWe~~~~-~~G~~Yy~nh~t~~ttW~~Pr~ 39 (42)
T 2djy_A 6 GPLPPGWEIRNT-ATGRVYFVDHNNRTTQFTDPRL 39 (42)
T ss_dssp SCCCSSEEEEEC-SSSCEEEEETTTTEEESSCTTT
T ss_pred CCCCcCcEEEEC-CCCCEEEEECCCCCEeCCCCCC
Confidence 346789999998 7899999999999999999864
No 75
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.57 E-value=0.0083 Score=49.83 Aligned_cols=39 Identities=18% Similarity=0.377 Sum_probs=32.2
Q ss_pred CceeeccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 14 AIQVIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 14 ~~Q~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
+..-....-.||+++.+ ..|+.||.|..|..|+||-|..
T Consensus 7 ~~d~~~~LP~GWE~~~d-~~Gr~YYvnh~tk~T~We~P~~ 45 (60)
T 2yse_A 7 GLDSELELPAGWEKIED-PVYGIYYVDHINRKTQYENPVL 45 (60)
T ss_dssp CCCCCSSCCSSEEEEEC-SSSCEEEEETTTTEEESSCHHH
T ss_pred ccCCCCCCCCCcEEEEC-CCCCEEEEeCCCCCeeccCCCc
Confidence 33334556789999999 6799999999999999999864
No 76
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=95.43 E-value=0.013 Score=45.80 Aligned_cols=33 Identities=15% Similarity=0.463 Sum_probs=29.2
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
..-.||++.++ .+|+.||.|..|++|+||-|..
T Consensus 10 ~LP~gWe~~~~-~~Gr~Yyinh~t~~TtW~~Pr~ 42 (46)
T 2ez5_W 10 PLPPRWSMQVA-PNGRTFFIDHASRRTTWIDPRN 42 (46)
T ss_dssp CCCTTEEEEEC-TTSSEEEEETTTTEEESBCTTT
T ss_pred CCCcCcEEEEc-CCCCEEEEECCCCCEeccCCCC
Confidence 45789999999 5899999999999999998853
No 77
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=95.28 E-value=0.012 Score=47.46 Aligned_cols=38 Identities=18% Similarity=0.449 Sum_probs=32.1
Q ss_pred ceeeccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 15 IQVIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 15 ~Q~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
|+-.+..-.||++.++ .+|+.||-|..|++|+||-|..
T Consensus 13 ~~~~~~LP~GWe~~~~-~~Gr~Yyinh~tk~TtW~dPr~ 50 (53)
T 2jmf_A 13 LINEGPLPPGWEIRYT-AAGERFFVDHNTRRTTFEDPRP 50 (53)
T ss_dssp TTSCSCCCTTEEEEEC-TTSCEEEEETTTCCEESSCCCS
T ss_pred cCcCCCCCcCcEEEEc-CCCCEEEEeCCCCcEecCCCCC
Confidence 4444556789999998 7999999999999999999864
No 78
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=94.88 E-value=0.023 Score=45.11 Aligned_cols=32 Identities=25% Similarity=0.556 Sum_probs=28.7
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
.-.||++.++. +|+.||.|..|++|+|+-|..
T Consensus 12 LP~gWe~~~~~-~Gr~Yy~nh~t~~T~W~~P~~ 43 (49)
T 2ysb_A 12 LPPGWSVDWTM-RGRKYYIDHNTNTTHWSHPLE 43 (49)
T ss_dssp CCTTEEEEECS-SSCEEEEETTTTEEESSCTTT
T ss_pred CCCCceEEECC-CCCEEEEEcCCCCEEecCCCC
Confidence 46799999985 899999999999999999864
No 79
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=94.61 E-value=0.024 Score=45.91 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=32.4
Q ss_pred eeccccCCceEEEeccCcceEEEEccccccccccCcccc
Q 003934 17 VIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVLA 55 (785)
Q Consensus 17 ~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~ 55 (785)
+.+..-.||+++.+ .+|+.||-|..|..|+||-|..-.
T Consensus 8 ~~~~LP~GWe~~~~-~~G~~Yyinh~tk~TtwedPr~~~ 45 (54)
T 1wmv_A 8 VAGDLPYGWEQETD-ENGQVFFVDHINKRTTYLDPRLAF 45 (54)
T ss_dssp CSSCSCTTEEEEEC-TTSCEEEEESSSCCEESSCTTSSC
T ss_pred cCCCCCcCcEEEEC-CCCCEEEEeCCCCCEeecCCCCcc
Confidence 45567889999999 589999999999999999996543
No 80
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=94.33 E-value=0.034 Score=45.53 Aligned_cols=39 Identities=28% Similarity=0.612 Sum_probs=32.7
Q ss_pred eeeccccCCceEEEeccCcceEEEEccccccccccCcccc
Q 003934 16 QVIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVLA 55 (785)
Q Consensus 16 Q~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~ 55 (785)
+..+..-.||++.++. +|+.||-|..|+.|+|+-|....
T Consensus 10 ~~~~~LP~GWe~~~~~-~Gr~Yyinh~tk~TtWe~Pr~~~ 48 (57)
T 2ysd_A 10 DNLGPLPENWEMAYTE-NGEVYFIDHNTKTTSWLDPRCLN 48 (57)
T ss_dssp SCCCSCCSSEEEEECS-SCCEEEEETTTTEEESSCTTTCS
T ss_pred CCCCCCCcCcEEEECC-CCCEEEEECCCCcEecCCCCCcc
Confidence 3445678899999984 89999999999999999997644
No 81
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.30 E-value=0.028 Score=48.63 Aligned_cols=34 Identities=21% Similarity=0.533 Sum_probs=29.9
Q ss_pred CCceEEEeccCcceEEEEccccccccccCcccccc
Q 003934 23 SGWRMVLHEESKQYYYWNVETGETSWEIPQVLAQT 57 (785)
Q Consensus 23 ~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~~~ 57 (785)
..|..|+. .-|+.||+|.+|.++.||.|..|-.-
T Consensus 20 t~W~~v~T-~dGR~fyyN~~Tk~S~WekP~eLk~~ 53 (73)
T 2dk7_A 20 TPWCVVWT-GDERVFFYNPTTRLSMWDRPDDLIGR 53 (73)
T ss_dssp SSCEEEEE-SSSCEEEEETTTTEECSSCCTTTTTC
T ss_pred CCcEEEEC-CCCCEEEecCcccceeccCChHhcCH
Confidence 47999985 56889999999999999999999863
No 82
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=89.44 E-value=0.1 Score=40.23 Aligned_cols=35 Identities=29% Similarity=0.519 Sum_probs=29.2
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCccc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVL 54 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l 54 (785)
.++-.||+++.+ ..|+.||-|.+|..|+|+-|.-.
T Consensus 7 ~~LP~GWe~~~~-~~gr~y~~n~~t~~t~W~dPr~~ 41 (46)
T 1jmq_A 7 VPLPAGWEMAKT-SSGQRYFKNHIDQTTTWQDPRKA 41 (46)
T ss_dssp CCCCTTBCCBCC-SSCCCBEEETTTTEEESSCTTTS
T ss_pred CCCCcCcEEEEc-CCCceEEEEecCCceeecCCCch
Confidence 356789999988 67888888999999999988643
No 83
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=84.41 E-value=0.19 Score=52.19 Aligned_cols=16 Identities=25% Similarity=0.179 Sum_probs=7.5
Q ss_pred hhHHHHHHhh-hchhHH
Q 003934 246 HSERQLQRLE-GSVDEE 261 (785)
Q Consensus 246 Hser~lK~LE-~sv~~~ 261 (785)
|.|.=.+-|+ .+.+++
T Consensus 272 ~~e~A~~fl~~~l~s~e 288 (449)
T 3iot_A 272 NKELAKEFLENYLLTDE 288 (449)
T ss_dssp CHHHHHHHHHHTTSSHH
T ss_pred CHHHHHHHHHHHhcCHH
Confidence 4444445554 444443
No 84
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=82.86 E-value=0.69 Score=44.11 Aligned_cols=33 Identities=24% Similarity=0.616 Sum_probs=30.9
Q ss_pred ccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 21 VSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 21 v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
.-.||+.++....|+.||-|.+|.+..|+.|..
T Consensus 8 lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 8 LPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp CCTTEEEEECSSTTCEEEEETTTCCEESSCCTT
T ss_pred CCchHHHHhcccCCchhhhhHHHhhHhhcCccc
Confidence 568999999999999999999999999999875
No 85
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=78.44 E-value=1.3 Score=40.90 Aligned_cols=35 Identities=11% Similarity=0.432 Sum_probs=30.1
Q ss_pred cccCCceEEEeccCcceEEEEccccccccccCcccc
Q 003934 20 DVSSGWRMVLHEESKQYYYWNVETGETSWEIPQVLA 55 (785)
Q Consensus 20 ~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~l~ 55 (785)
..--||++.++. +|+.||=|..|..|+|+-|..-+
T Consensus 72 pLP~GWE~r~d~-~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 72 ELPRGWEIKTDQ-QGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp CCCTTEEEEECT-TCCEEEEETTTTEEESSCSCCSC
T ss_pred CCCCCCeEEECC-CCCEEEEeCCCCCEeeCCCCccc
Confidence 345789999998 89999999999999999986443
No 86
>2v8f_C MDIA1, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus}
Probab=69.92 E-value=2.3 Score=30.39 Aligned_cols=15 Identities=60% Similarity=1.234 Sum_probs=9.1
Q ss_pred CCCCCCCCCCCCCCC
Q 003934 435 VPPPPDEEWIPPPPP 449 (785)
Q Consensus 435 pPPPPe~E~iPPPPP 449 (785)
|||+|+.--||||||
T Consensus 4 PPplPg~~giPpPpp 18 (26)
T 2v8f_C 4 PPPLPGVASIPPPPP 18 (26)
T ss_pred CCCCCCCCCCCCCCC
Confidence 455566666666665
No 87
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=69.75 E-value=2.9 Score=36.70 Aligned_cols=31 Identities=32% Similarity=0.649 Sum_probs=27.6
Q ss_pred CCCccccccccCCCCceEEEeccccceeccCC
Q 003934 752 DLPSGWQAYWDESSKQIYYGNTITSKTTWTRP 783 (785)
Q Consensus 752 ~LP~gWqa~~D~~tg~vYY~N~~T~eTtW~RP 783 (785)
+||.||-.-. -++|-.-|.|..|+--||.||
T Consensus 28 ~LPeGW~~v~-H~SGmP~YlH~~trV~T~SrP 58 (79)
T 3le4_A 28 PLPDGWIMTF-HNSGVPVYLHRESRVVTWSRP 58 (79)
T ss_dssp CCCTTEEEEE-CTTSSEEEEETTTTEEESSCC
T ss_pred cCCCccEEEE-ecCCceEEEeccceEEeccCC
Confidence 6999998655 466999999999999999999
No 88
>3lvh_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 9.00A {Bos taurus}
Probab=68.42 E-value=2.3 Score=42.91 Aligned_cols=43 Identities=16% Similarity=0.421 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHHhhhcccCCcccHHHHHHHHHhHHHHHHHHHH
Q 003934 652 SLVDKWKAAKEELNENEEDEPENAYEILERKRQREIEEWRAQQ 694 (785)
Q Consensus 652 SLVdKW~a~qeEl~EeEEee~e~~~E~ler~rqreIEeWr~qQ 694 (785)
--|.|||.=|+..-++-++.+++..+.+..+.+|+|++|-.++
T Consensus 100 EsIRkWREEq~kRLeekDa~sekkk~E~rekAkKeLddwY~~y 142 (205)
T 3lvh_D 100 ESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQ 142 (205)
T ss_dssp THHHHHHHHHTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5599999877764444334344455777778889999997653
No 89
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus}
Probab=65.84 E-value=2.8 Score=41.62 Aligned_cols=43 Identities=16% Similarity=0.421 Sum_probs=29.6
Q ss_pred hhHHHHHHHHHHhhhcccCCcccHHHHHHHHHhHHHHHHHHHH
Q 003934 652 SLVDKWKAAKEELNENEEDEPENAYEILERKRQREIEEWRAQQ 694 (785)
Q Consensus 652 SLVdKW~a~qeEl~EeEEee~e~~~E~ler~rqreIEeWr~qQ 694 (785)
--|.|||.=|++.-++-++.++...+..-.+.+++|++|-..+
T Consensus 85 EsIRKWREEQkkRLEeRDA~SekkKeEwrEKAKKELDDWYenY 127 (190)
T 3lvg_D 85 ESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQ 127 (190)
T ss_dssp THHHHHHHHHTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 5599999877775444434344445667778888999997654
No 90
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=63.93 E-value=1.4 Score=45.68 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=0.0
Q ss_pred CCCCCCC
Q 003934 462 PPEDSYN 468 (785)
Q Consensus 462 p~~~SY~ 468 (785)
+|.++|.
T Consensus 428 ~~~~~~~ 434 (449)
T 3iot_A 428 LPQQSYQ 434 (449)
T ss_dssp -------
T ss_pred CCCCCcc
Confidence 4456664
No 91
>1xi4_J LCA, clathrin light chain A; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 3iyv_J
Probab=50.18 E-value=15 Score=31.54 Aligned_cols=42 Identities=21% Similarity=0.429 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHhhhcccCCcccHHHHHHHHHhHHHHHHHHH
Q 003934 652 SLVDKWKAAKEELNENEEDEPENAYEILERKRQREIEEWRAQ 693 (785)
Q Consensus 652 SLVdKW~a~qeEl~EeEEee~e~~~E~ler~rqreIEeWr~q 693 (785)
--|.+|+.-|+..-++-++.++...+.+-.+.++.|++|-..
T Consensus 9 E~Ir~WRE~~~~~i~erd~~~~~~k~e~~~~A~k~iddfY~~ 50 (70)
T 1xi4_J 9 ESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELDEWYAR 50 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 358999988877555544444445677777888999999654
No 92
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=30.08 E-value=19 Score=44.70 Aligned_cols=26 Identities=27% Similarity=0.790 Sum_probs=23.8
Q ss_pred CcceEEEEccccccccccCccccccc
Q 003934 33 SKQYYYWNVETGETSWEIPQVLAQTT 58 (785)
Q Consensus 33 s~~~yywn~~tgetswe~p~~l~~~~ 58 (785)
....|+||+.-|++.|+||...+...
T Consensus 706 ~~KlYh~N~~gG~stW~Lp~~w~~~~ 731 (1376)
T 2zxq_A 706 EQKLYHWNTKGGTTTWTLPDSWKNLS 731 (1376)
T ss_dssp GCEEEEEESSCEEEEEECCGGGTTCS
T ss_pred cceeEEEeCCCCeeeEECCcccCCCc
Confidence 57899999999999999999999864
No 93
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae}
Probab=25.50 E-value=22 Score=44.24 Aligned_cols=26 Identities=31% Similarity=0.868 Sum_probs=23.1
Q ss_pred cCcceEEEEccccccccccCcccccc
Q 003934 32 ESKQYYYWNVETGETSWEIPQVLAQT 57 (785)
Q Consensus 32 ~s~~~yywn~~tgetswe~p~~l~~~ 57 (785)
.....|+||+.-|++.|+||...+..
T Consensus 943 ~~eKLYH~N~~GGtsTW~LP~~w~~~ 968 (1531)
T 3ecq_A 943 DKEKMYYFNTQAGATTWTLPSDWAKS 968 (1531)
T ss_dssp GGCEEEEEESSCSEEEEECCHHHHTS
T ss_pred CccceEEEcCCCCeEeeECCCcccCC
Confidence 35789999999999999999998873
No 94
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=24.07 E-value=37 Score=34.86 Aligned_cols=36 Identities=31% Similarity=0.602 Sum_probs=31.5
Q ss_pred eeccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 17 VIGDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 17 ~~~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
..+-+-.||++.... .|.-||=|-.|..|.|+=|.-
T Consensus 8 ~~~~l~~~we~~~~~-~~~~y~~~h~~~tt~w~~p~~ 43 (261)
T 1eg3_A 8 LSTSVQGPWERAISP-NKVPYYINHETQTTCWDHPKM 43 (261)
T ss_dssp HHTTCCTTEEEEECT-TSCEEEEETTTTEEESSCHHH
T ss_pred cCCCCCCCcceeECC-CCCeEeecCCcccccCCCCch
Confidence 446678899999985 799999999999999999974
No 95
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein; HTLV-II matrix protein, retroviral matrix protein; NMR {Human t-lymphotropic virus 2} SCOP: a.61.1.2
Probab=24.00 E-value=1.3e+02 Score=28.58 Aligned_cols=12 Identities=50% Similarity=0.927 Sum_probs=4.7
Q ss_pred CCCCCCCCCCCC
Q 003934 441 EEWIPPPPPDNE 452 (785)
Q Consensus 441 ~E~iPPPPPd~e 452 (785)
.+..|+.||+.|
T Consensus 110 ~~~p~~aP~~~~ 121 (137)
T 1jvr_A 110 TTPPPPPPPSPE 121 (137)
T ss_dssp CCSCCCCCSSSC
T ss_pred ccCCCCCCCccc
Confidence 333344444433
No 96
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=22.16 E-value=82 Score=27.78 Aligned_cols=44 Identities=23% Similarity=0.383 Sum_probs=31.7
Q ss_pred hhhHHHHHHHHHHhhhcccCCcccHHHHHHHHHhHHHHHHHHHHHHhcc
Q 003934 651 SSLVDKWKAAKEELNENEEDEPENAYEILERKRQREIEEWRAQQIASGE 699 (785)
Q Consensus 651 sSLVdKW~a~qeEl~EeEEee~e~~~E~ler~rqreIEeWr~qQl~sG~ 699 (785)
-.+++|...|-+|..++++.+ ....++|++.|++|+++=...|-
T Consensus 30 ee~leKl~~VveERree~~~~-----~~~~~er~~Kl~~~~e~l~~~GI 73 (86)
T 3nr7_A 30 EEMLEKLEVVVNERREEESAA-----AAEVEERTRKLQQYREMLIADGI 73 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 345888888888877766442 45556788899999988666664
No 97
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=20.96 E-value=22 Score=38.63 Aligned_cols=34 Identities=32% Similarity=0.790 Sum_probs=29.1
Q ss_pred ccccCCceEEEeccCcceEEEEccccccccccCcc
Q 003934 19 GDVSSGWRMVLHEESKQYYYWNVETGETSWEIPQV 53 (785)
Q Consensus 19 ~~v~~~w~~~~~e~s~~~yywn~~tgetswe~p~~ 53 (785)
|-.--||++.++ .+|+.||=|..|-.|+|+-|..
T Consensus 7 ~~lP~gWe~~~~-~~g~~y~i~h~~~~t~w~~Pr~ 40 (429)
T 3olm_A 7 GPLPSGWEMRLT-NTARVYFVDHNTKTTTWDDPRL 40 (429)
T ss_dssp CCCCTTCCCCCS-SCCCCCEEETTTTEEESSCTTS
T ss_pred CCCCCCceeEEC-CCCCeEEEeCCCcceeccCCCC
Confidence 345678999998 5899999999999999998864
Done!