BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003936
         (785 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 276/880 (31%), Positives = 416/880 (47%), Gaps = 133/880 (15%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTELRYFEWHQFPLKTL-NILH 63
            EIQ N   F+KM  LRLLK   S +  K ++      P  ELRY  W  +PLKTL +  H
Sbjct: 557  EIQCNTKVFTKMKRLRLLKLHWSDHCGKVVLPPNFEFPSQELRYLHWEGYPLKTLPSNFH 616

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             ENLV L +  S + QLW   + L  LK IDL YSK+LTK+P  S    LEIL+L  C S
Sbjct: 617  GENLVELHLRKSTIKQLWKRSKGLEKLKVIDLSYSKVLTKMPKFSRMPKLEILNLEGCIS 676

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC--H 181
            L + HSSI  +  L  L+L  C+ L SLP+S+  + L+ L L GC N  N P++     H
Sbjct: 677  LRKLHSSIGDVKMLTYLNLGGCEKLQSLPSSMKFESLEVLHLNGCRNFTNFPEVHENMKH 736

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR------- 234
            L+  L L    IEELPSSI  L+++  L +  C   +        ++FL  +R       
Sbjct: 737  LKE-LYLQKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIK 795

Query: 235  -----IHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
                 I    +L+ L++  C+      G     +   EL L    R + LPS      SL
Sbjct: 796  ELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGT-RIKELPSS---IGSL 851

Query: 286  TSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            TSLEI++   C  FE+ PD   N++ L +L +  + I+ELP  +G L  L +L L   + 
Sbjct: 852  TSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKELSLDK-TF 910

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV----- 390
            ++ +  SI+ L++++++ +  CSN + FPEI           I+ + I  +P S+     
Sbjct: 911  IKELPKSIWSLEALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTR 970

Query: 391  ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
               L L  C  L SLPSS+C  KSL  L +  C  LE  P+ L ++E L  L + GT I 
Sbjct: 971  LNSLNLENCKNLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAIT 1030

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE-Y 505
             +P S+  L +L  LKL  C + E+LP+ +     LT+L + +C     LPD + +L+  
Sbjct: 1031 GLPSSIEHLRSLQWLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHNLPDNLRSLQCC 1090

Query: 506  LKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN-NL 562
            L  L + G  + E  +P  +  LSSLE+L +S+N+++ IP  + QL  L +L++++   L
Sbjct: 1091 LTTLDLGGCNLMEGGIPRDIWGLSSLEFLDVSENHIRCIPIGIIQLLKLTTLRMNHCLML 1150

Query: 563  ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLK----- 617
            E IP   D  SSL+ +   E +  R  E L S P  +        L   L NC K     
Sbjct: 1151 EDIP---DLPSSLRRI---EAHGCRCLETLSS-PIHV--------LWSSLLNCFKSLIQA 1195

Query: 618  LDPNELSEIIKDGWMKQSVN-------------GETYITKS-----------MYFPGNE- 652
             D +++    +D   +Q ++              + Y   S           ++ PG+  
Sbjct: 1196 HDSHDVQNEEEDSHKQQDIDLALPTSSGNLDEEEDLYGGNSDEEDGPLGQIDVFIPGSSG 1255

Query: 653  IPKWFRHQSTGSTISLKTPQPTGY--NKLMGFA-FCVVVACSVSECCRHESVED---DRK 706
            IP+W  HQ+ G  + ++ P    Y  N  +GFA F  ++     +    E V+     +K
Sbjct: 1256 IPEWVSHQNKGCEVRIELPM-NWYEDNDFLGFALFFHLLPLDNDDDDDDELVKRYIITQK 1314

Query: 707  CNLFDVVCDRRSE------GYDSYTSSYLGKISHVESD---------HVFLGSSIFAGEN 751
            C L  +  D +SE        DS+  +Y    + V SD         H+ +     +G  
Sbjct: 1315 CKL-TISHDDQSEMVASSISLDSFCEAYRISSNCVSSDPALRVTYVPHIAIPDHYRSG-- 1371

Query: 752  SCKRSDEFFFHIDR---SC-------CEVKKCGIHFVHAQ 781
                   F  H+D    SC        +V+ CGIH ++AQ
Sbjct: 1372 ---WWKNFKAHLDTPFVSCQCGKNRPFKVEGCGIHLIYAQ 1408


>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 248/793 (31%), Positives = 377/793 (47%), Gaps = 127/793 (16%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKF-----------CGSKNKCMVHSLEGVPF--TELR 47
            +SKI  ++ ++   FSKM  LRLLKF            G  ++  + S +G+     +L 
Sbjct: 544  ISKIE-KVDLSSVAFSKMWNLRLLKFYHNSFLSWKNPTGFVSESTLDSRDGLQSLPNKLC 602

Query: 48   YFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD 106
            +  WH +P ++L +    ENLV L MP S+V +LW  V++L  LK +DL  S+LL  LPD
Sbjct: 603  FLHWHGYPWESLPSNFSMENLVELNMPFSQVKELWTGVKHLQKLKLLDLHDSELLVTLPD 662

Query: 107  LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
            LS A NLE + L  C+SL E  SSIQ L KL  L L  CK L SLP+ I  KYLK L L 
Sbjct: 663  LSSASNLEKIILNNCTSLLEIPSSIQCLRKLVCLSLSNCKELQSLPSLIPLKYLKTLNLS 722

Query: 167  GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
             CSNLK  P+++       L L G G+EE PSS++ L  +  L +  C+ L+++  SI  
Sbjct: 723  SCSNLKKFPEISG--EIEELHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSI-H 779

Query: 227  LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
            L  L+++ +  C +L+       NI                     E LPS      SLT
Sbjct: 780  LNSLDNLDLSWCSSLKNFPDVVGNIKYLNVGHTA-----------IEELPSSIGSLVSLT 828

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
             L + D    + LP  +GNL +L  L +  ++I+ELP  +G L+ L KL +    ++E +
Sbjct: 829  KLNLKDT-EIKELPSSIGNLSSLVELNLKESSIKELPSSIGCLSSLVKLNIA-VVDIEEL 886

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSS 405
             SS+ +L S+    +   S L   P    C           +S++KLN   ++++ LP S
Sbjct: 887  PSSLGQLSSLVEFNLEK-STLTALPSSIGC----------LTSLVKLNLAVTEIKELPPS 935

Query: 406  LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKL 463
            +    SL  L +  C  L  LP  +G L+ LE+L + G   +R +P S+ +L  L  + L
Sbjct: 936  IGCLSSLVELNLSQCPMLGSLPFSIGELKCLEKLYLCGLRRLRSIPSSIRELKRLQDVYL 995

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              C+    LPS                         +     L+ L +  + I +VP SL
Sbjct: 996  NHCTKLSKLPS-------------------------LSGCSSLRDLVLSYSGIVKVPGSL 1030

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPL-----SS 574
            G LSSL+ L+L  NN   IP ++ QLS L  L +S       L  +P+R+  L     +S
Sbjct: 1031 GYLSSLQVLLLKGNNFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVLVAHNCTS 1090

Query: 575  LKY----LDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG 630
            LK     L  F+ + ++ P+    F                  NC+ L+ N  S I++  
Sbjct: 1091 LKTVSSPLIQFQESQEQSPDDKYGFT---------------FANCVSLEKNARSNIVESA 1135

Query: 631  WMKQ-----------SVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKL 679
             +K            +   E  ++  + FPG+EIP+ FR+Q+TG++++   P     NKL
Sbjct: 1136 LLKTQHLATAVLELLTSYEEILVSPVVCFPGSEIPECFRYQNTGASVTTLLPSKWHNNKL 1195

Query: 680  MGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRR--SEGYDS--YTSSYLGKISH- 734
            +GF FC V+            +E+    + F   CD R  +E  DS  +TS  +G+  + 
Sbjct: 1196 VGFTFCAVI-----------ELENRHYQDGFTFQCDCRIENEYGDSLEFTSKEIGEWGNQ 1244

Query: 735  --VESDHVFLGSS 745
               E+DHVFL ++
Sbjct: 1245 FEFETDHVFLWNT 1257


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 239/830 (28%), Positives = 365/830 (43%), Gaps = 157/830 (18%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKN----------KCMVHSLEGVPFTELRYFEWHQFPL 56
            EI      F +M  LRL K   S            K ++     +P  +LRY  W  + L
Sbjct: 363  EISFTTEAFRRMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSL 422

Query: 57   KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
            K+L +  H ENL+ L +  S + QLW   + L  LK + L  S+LL ++P  S   NLE 
Sbjct: 423  KSLPSNFHGENLIELNLKHSNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQ 482

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L++  C  L +  SSI  L KL +L+L                       RGC       
Sbjct: 483  LNIELCEKLDKVDSSIGILKKLTLLNL-----------------------RGCQK----- 514

Query: 176  KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                             I  LPS+I+ L ++  L ++S   ++ + SSI  L  L+++ I
Sbjct: 515  -----------------ISSLPSTIQYLVSLKRLYLHSIA-IDELPSSIHHLTQLQTLSI 556

Query: 236  HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
              C NL+                               SLPS  C  KSL  L++  C N
Sbjct: 557  RGCENLR-------------------------------SLPSSICRLKSLEELDLYGCSN 585

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
                P+ + N++ L  L + GT ++ LP  +  L  L++LEL+ C  L  + SSI++LKS
Sbjct: 586  LGTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKS 645

Query: 356  VESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSVLKLNK--------CSKLE 400
            +E +++  CSNL+ FPEI          N+  + I+ +P S+  LN         C  L 
Sbjct: 646  LEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLR 705

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALS 459
            SLPSS+C  KSL  L++  C  LE  P+ + N+E L +L + GT I+E+P S+  L  L+
Sbjct: 706  SLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLT 765

Query: 460  KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
             ++L +  +  SLPS +   K L  L +  C +    P+ + ++E LK L + GT+I+++
Sbjct: 766  SMRLVESKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKL 825

Query: 520  PESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-------------NNLERI 565
            P S+G L+ L    LS   NL+ +P S+  L SL  L LS              NN+  I
Sbjct: 826  PSSIGYLNHLTSFRLSYCTNLRSLPSSIGGLKSLTKLSLSGRPNRVTEQLFLSKNNIHHI 885

Query: 566  PERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC----LKLDP 620
            P  +  L +L+ LD+     L+ IP+        +PS   SLR  +D   C        P
Sbjct: 886  PSVISQLCNLECLDISHCKMLEEIPD--------LPS---SLR-EIDAHGCTGLGTLSSP 933

Query: 621  NELSEIIKDGWMKQSVNGET-YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGY-NK 678
            + L       W K+    ET +    +    N IP+W  HQ  GS I ++ P    + + 
Sbjct: 934  SSLLWSSLLKWFKKV---ETPFEWGRINLGSNGIPRWVLHQEVGSQIRIELPMNCYHDDH 990

Query: 679  LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESD 738
             +GF F           C +E V D      FD   D ++  Y   +      I+  ESD
Sbjct: 991  FLGFGF----------FCLYEPVVDLNLSLRFDEDLDEKAYAYKGASWCECHDINSSESD 1040

Query: 739  HVFLGSSIFAGENSCKRSDEF-FFHIDRSCC------EVKKCGIHFVHAQ 781
             V++            +S+++   H     C       +K CGIH V++Q
Sbjct: 1041 EVWVVYCPKIAIGDKLQSNQYKHLHASFDACIIDCSKNIKSCGIHLVYSQ 1090


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 199/616 (32%), Positives = 295/616 (47%), Gaps = 101/616 (16%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSK----------NKCMVHSLEGVPFTELRYFEWHQFPL 56
            EI      F +M  LRL K   S            K ++     +P  +LRY  W  + L
Sbjct: 553  EISFTTEAFRRMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSL 612

Query: 57   KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
            K+L +  H ENL+ L +  S + QLW   + L  LK + L  S+LL ++P  S   NLE 
Sbjct: 613  KSLPSNFHGENLIELNLKHSNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQ 672

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L++  C  L +  SSI  L KL +L+L  C+ ++SLP++I  +YL  L            
Sbjct: 673  LNIELCEKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTI--QYLVSL------------ 718

Query: 176  KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                      L L  + I+ELPSSI  L+ +  L I  C+ L ++ SSI +L+ LE + +
Sbjct: 719  --------KRLYLHSIAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDL 770

Query: 236  HRCPNL----QFLE----MPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQ 279
            + C NL    + +E    +   N+ GT  K  PSS         L+L+ C    SLPS  
Sbjct: 771  YGCSNLXTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSI 830

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
               KSL  L++  C N E  P+ + +++ L  L +  T I+ELP  +G L  L+ L L+ 
Sbjct: 831  WRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQC 890

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSVLK 392
            C  L  + SSI +LKS+E +++  CSNL+ FPEI          ++ G+ I+ +PSS+  
Sbjct: 891  CQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEY 950

Query: 393  LNKCS--------KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
            LN  +         L SLPSS+C  K L  L +  C  LE  P+ + ++E L++L + GT
Sbjct: 951  LNHLTSMRLVEXKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGT 1010

Query: 445  GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
             I+++P S+  L                         LTS  +  C N   LP  IG L+
Sbjct: 1011 SIKKLPSSIGYL-----------------------NHLTSFRLSYCTNLRSLPSSIGGLK 1047

Query: 505  YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLE 563
             L  L++ G   R            E L LS NN+  IP  ++QL +L  L +S+   LE
Sbjct: 1048 SLTKLSLSGRPNRVT----------EQLFLSKNNIHHIPSVISQLCNLECLDISHCKMLE 1097

Query: 564  RIPERLDPLSSLKYLD 579
             IP   D  SSL+ +D
Sbjct: 1098 EIP---DLPSSLREID 1110


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 263/904 (29%), Positives = 399/904 (44%), Gaps = 155/904 (17%)

Query: 7    EIQINPYTFSKMTELRLLK-FCG-----SKNKCMVHSLEGVPF-TELRYFEWHQFPLKTL 59
            E+Q     F+KM +LRLLK +C      ++ +  V   + + F  +LRY  W    L++L
Sbjct: 544  EMQFTTEVFAKMNKLRLLKVYCNDHDGLTREEYKVFLPKDIEFPHKLRYLHWQGCTLRSL 603

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
             +  + ENLV + +  S + QLW   + L  LK IDL  SK L K+P  S   NLE L+L
Sbjct: 604  PSKFYGENLVEINLKSSNIKQLWKGDKFLGKLKVIDLSDSKQLVKMPKFSSMPNLERLNL 663

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
              C SL E H SI  L +L  L+L  C+ L S P  +  + L+ L L  C NLK  PK+ 
Sbjct: 664  EGCISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLDRCQNLKKFPKIH 723

Query: 179  S--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
                HL+  L L    I+ELPSSI  L+++  L + +C  LE        ++FL  + + 
Sbjct: 724  GNMGHLKE-LYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLE 782

Query: 237  RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
             C   +        ++  R      S +K         LPS     +SL  L++  C  F
Sbjct: 783  GCSKFEKFSDTFTYMEHLRGLHLGESGIK--------ELPSSIGYLESLEILDLSYCSKF 834

Query: 297  ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS--------- 347
            E+ P+  GN++ L  L +D TAI+ELP  +G L  L  L LK C + E  S         
Sbjct: 835  EKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLL 894

Query: 348  --------------SSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGIER 385
                          +SI  L+S+E + +S CSN + FPEI          C ++ + I+ 
Sbjct: 895  RELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELC-LENTAIKE 953

Query: 386  IPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
            +P+ +        L L+ CS  E  P        L +L  +D   ++ LP  +G+L  L+
Sbjct: 954  LPNGIGCLQALESLALSGCSNFERFPE--IQMGKLWAL-FLDETPIKELPCSIGHLTRLK 1010

Query: 438  ELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFES-----------------------L 472
             L +E    +R +P S+  L +L +L L  CS+ E+                       L
Sbjct: 1011 WLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITEL 1070

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLS-SLE 530
            PS +   + L SLE+I+C+N + LP+ IG+L  L  L ++  T +R +P++L  L   L 
Sbjct: 1071 PSLIGHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLL 1130

Query: 531  WLVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
            WL L   NL    IP  L  LS LVSL +S N++  IP  +  LS LK   LF N+   +
Sbjct: 1131 WLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLSKLKA--LFMNHCPML 1188

Query: 589  PEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ-------------- 634
             E        +PS  T +    +   C  L+    S ++    +K+              
Sbjct: 1189 EEI-----GEVPSSLTVM----EAHGCPSLETETFSSLLWSSLLKRFKSPIQPEFFEPNF 1239

Query: 635  SVNGETYITK-SMYFPG-NEIPKWFRHQSTGSTISLKTPQPTGY--NKLMGFA-FCVVVA 689
             ++ + Y  + S+  PG N IP+W  HQ  G  +S++ P    Y  +  +GF  F   V 
Sbjct: 1240 FLDLDFYPQRFSILLPGSNGIPEWVSHQRMGCEVSIELPM-NWYEDDNFLGFVLFFHHVP 1298

Query: 690  CSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD---------SYTSSYLGKISH-VESDH 739
                EC   E+ E         +    +SE  +         +Y +S+L    H  +SD 
Sbjct: 1299 LDDDEC---ETTEGSIPHCELTISHGDQSERLEEISFYFKCKTYLASHLLSGKHCYDSDS 1355

Query: 740  --------VFLGSSIFAGENSCKRSDEFFFHI------------DRSCCEVKKCGIHFVH 779
                     +        E   +R + F  H             D +C +VK CGIH ++
Sbjct: 1356 TPDPAIWVTYFPQIDIPSEYRSRRRNNFKXHFHTPIGVGSFKCGDNACFKVKSCGIHLLY 1415

Query: 780  AQRQ 783
            AQ Q
Sbjct: 1416 AQDQ 1419


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 261/886 (29%), Positives = 388/886 (43%), Gaps = 130/886 (14%)

Query: 7    EIQINPYTFSKMTELRLLK-FCG-----SKNKCMVHSLEGVPF-TELRYFEWHQFPLKTL 59
            EIQ N   FSKM +LRLLK +C      ++ K  V   +   F  +LRY  W +  L +L
Sbjct: 500  EIQFNTKVFSKMKKLRLLKIYCNDHDGLTREKYKVLLPKDFQFPHDLRYLHWQRCTLTSL 559

Query: 60   NI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
                + ++L+ + +  S + QLW   + L  LK IDL  SK L K+P  S   NLE L+L
Sbjct: 560  PWNFYGKHLIEINLKSSNIKQLWKGNKCLEELKGIDLSNSKQLVKMPKFSSMPNLERLNL 619

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM- 177
              C+SL E HSSI  L  L  L+L  C+ L S P+S+  + L+ L L  C NLK  P++ 
Sbjct: 620  EGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIH 679

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
             +      L L   GI+ELPSSI  L+++  L + +C   E        ++FL  + +  
Sbjct: 680  GNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEG 739

Query: 238  CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            CP  +       N   T +       L L+K    E LPS     +SL  L+I  C  FE
Sbjct: 740  CPKFE-------NFPDTFTYMGHLRRLHLRKSGIKE-LPSSIGYLESLEILDISCCSKFE 791

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS---------- 347
            + P+  GN++ L  L +  TAI+ELP  +G L  L  L L+ C + E  S          
Sbjct: 792  KFPEIQGNMKCLKNLYLRXTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLR 851

Query: 348  -------------SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
                          SI  L+S+E++ +S CSN + FPEI        G  +    +   N
Sbjct: 852  ELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEI-------QGNMKCLKELSLEN 904

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              + ++ LP+S+   ++L SL +  C  LER P+   N+  L  L ++ T I  +P S+ 
Sbjct: 905  --TAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVG 962

Query: 455  QLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
             L  L  L L  C + +SLP+ +   KSL  L +  C N     +   ++E L+ L ++ 
Sbjct: 963  HLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRE 1022

Query: 514  TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDP 571
            T I E+P S+  L  L+ L L +  NL  +P S+  L+ L SL + N   L  +P+ L  
Sbjct: 1023 TGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRS 1082

Query: 572  LS-SLKYLDLFENNL--DRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCL 616
            L   L  LDL   NL  + IP  L                  IP+  T L     LR  L
Sbjct: 1083 LQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQL---CKLRTLL 1139

Query: 617  KLDPNELSEIIKD-----GWMKQ----SVNGETYITK-----------------SMYFPG 650
             ++   + E+I +     GW++     S+  ET  +                  ++  PG
Sbjct: 1140 -INHCPMLEVIGELPSSLGWIEAHGCPSLETETSSSLLWSSLLKHLKSPIQQKFNIIIPG 1198

Query: 651  NE-IPKWFRHQSTGSTISLKTPQPTGY--NKLMGFA--FCVVVACSVSECCRHESV---- 701
            +  IP+W  HQ  G  +S++ P    Y  N L+GF   F  V      EC R        
Sbjct: 1199 SSGIPEWVSHQRMGCEVSVELPM-NWYEDNNLLGFVLFFHHVPLDDDDECVRTSGFIPHC 1257

Query: 702  -----EDDRKCNLFDVVCDRRSEGYD----SYTSSYL--GKISHVESDHVFLGSSIFAGE 750
                   D+   L D+      + Y     SY S+    G  S       +        +
Sbjct: 1258 KLAISHGDQSKRLDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPALWVTYFPQIGIPSK 1317

Query: 751  NSCKRSDEFFFHIDR-------SCCE-----VKKCGIHFVHAQRQR 784
               ++ + F  H D        +C E     VK CGIH ++AQ Q+
Sbjct: 1318 YRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYAQDQK 1363



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 178/592 (30%), Positives = 264/592 (44%), Gaps = 92/592 (15%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
            NS+  +    FS M  L  L   G  + C +HS                      +I   
Sbjct: 598  NSKQLVKMPKFSSMPNLERLNLEGCTSLCELHS----------------------SIGDL 635

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC--S 122
            ++L  L + G +  + +       SL+ + L     L K P++    N+E L   Y   S
Sbjct: 636  KSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIH--GNMECLKELYLNES 693

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--KYLKRLVLRGCSNLKNLPKMTS- 179
             + E  SSI YL  LEVL+L  C +    P  IH   K+L+ L L GC   +N P   + 
Sbjct: 694  GIQELPSSIVYLASLEVLNLSNCSNFEKFPX-IHGNMKFLRELYLEGCPKFENFPDTFTY 752

Query: 180  -CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI-----SSSIFKLQFLESI 233
              HLR  L L   GI+ELPSSI  L ++  L I  C + E       +    K  +L   
Sbjct: 753  MGHLRR-LHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRXT 811

Query: 234  RIHRCPN-------LQFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
             I   PN       L+ L +  C          +      EL L +    E LP      
Sbjct: 812  AIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKE-LPGSIGYL 870

Query: 283  KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +SL +L +  C NFE+ P+  GN++ L  L ++ TAI+ELP  +G+L             
Sbjct: 871  ESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRL------------- 917

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV----- 390
                       +++ES+ +S CSNL+ FPEI           +D + IE +P SV     
Sbjct: 918  -----------QALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTR 966

Query: 391  ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
               L L+ C  L+SLP+S+C  KSL  L +  C  LE   +   ++E LE L +  TGI 
Sbjct: 967  LDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGIS 1026

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE-Y 505
            E+P S+  L  L  L+L  C +  +LP+ +     LTSL + +C     LPD + +L+  
Sbjct: 1027 ELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCC 1086

Query: 506  LKVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
            L +L + G  +   E+P  L  LS L +L +S+N ++ IP  + QL  L +L
Sbjct: 1087 LTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTL 1138


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 184/536 (34%), Positives = 277/536 (51%), Gaps = 58/536 (10%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPF--TELRYFEWHQFPLKTLNI- 61
            EI+++   F++M  LRLLK   S   +KC VH   G+     ELRY  W  +PL +L   
Sbjct: 554  EIELSSTAFARMYNLRLLKIYNSAAGDKCTVHLPSGLESLSHELRYLHWDGYPLTSLPCN 613

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
               +NLV L +  SKV QLW   QNL +LK ++L   + +T LPDLS A+NLE L+L +C
Sbjct: 614  FRPQNLVELNLSSSKVKQLWRGDQNLGNLKDVNLSNCEHITFLPDLSKARNLERLNLQFC 673

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KM 177
             SL +  SSIQ+L+KL  LDL  CK L +LP+ I+S  L+ L L GC+NLK  P    K+
Sbjct: 674  KSLVKFPSSIQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNLSGCANLKKCPETAGKL 733

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            T  +L  T       +EELP SI  LS +  L + +CK + N+  +I+ L+ L  + I  
Sbjct: 734  TYLNLNET------AVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDISG 787

Query: 238  CPNLQFLEMPSCNI-----DGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKS 284
            C ++      S NI     +GT  +E PSS         L L  C R ++LPS       
Sbjct: 788  CSSISRFPDFSWNIRYLYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKLGC 847

Query: 285  LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            L  L++  C +    P    N++    L +DGTAIRE+P  +  L  L++L L+NC + E
Sbjct: 848  LEKLDLSGCSSITEFPKVSRNIR---ELYLDGTAIREIPSSIECLCELNELHLRNCKQFE 904

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV------- 390
             + SSI KLK +  + +S C   + FPE+        +  ++ + I ++PS +       
Sbjct: 905  ILPSSICKLKKLRRLNLSGCLQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLA 964

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK--------LERLPDELGNLEALEELRV 441
             L++  C  LE +   + +  S      +DC +        L  +PD LG L +LE L +
Sbjct: 965  CLEVGNCKYLEDIHCFVGLQLSKRHRVDLDCLRKLNLDGCSLSEVPDSLGLLSSLEVLDL 1024

Query: 442  EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
             G  +R +P S+ +L  L  L L+ C   +SLP    +   L+ L++ +C++   L
Sbjct: 1025 SGNNLRTIPISINKLFELQYLGLRNCKRLQSLPE---LPPRLSKLDVDNCQSLNYL 1077



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA-CSVSE 694
            S   PG+  P+WF HQS GST++         ++ +GF+ CVV+A CSVS 
Sbjct: 1343 SFCLPGDVTPEWFSHQSWGSTVTFLLSSDWANSEFLGFSLCVVIAFCSVSH 1393


>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 221/718 (30%), Positives = 334/718 (46%), Gaps = 143/718 (19%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPF--TELRYFEWHQFPL 56
            +SKI  EI+++     +M +LRLLK   S+   KC VH   G+     ELRY  W  +PL
Sbjct: 535  VSKIR-EIELSSTALGRMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPL 593

Query: 57   KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             +L +    +NLV + +  SKV +LW   QNLV+LK ++L   + +T LPDLS A+NLE 
Sbjct: 594  TSLPSNFRPQNLVEINLSCSKVNRLWRGDQNLVNLKDVNLSNCEHITFLPDLSKARNLER 653

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L+L +C+SL +  SSIQ+L++L  LDL  C+ L +LP+ I+S  L+ L L GC+NLK  P
Sbjct: 654  LNLQFCTSLVKVPSSIQHLDRLVDLDLRGCERLVNLPSRINSSCLETLNLSGCANLKKCP 713

Query: 176  ----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                K+T  +L  T       +EELP SI  LS +  L + +CK L N+  +++ L  L 
Sbjct: 714  ETARKLTYLNLNET------AVEELPQSIGELSGLVALNLKNCKLLVNLPENMYLLTSLL 767

Query: 232  SIRIHRCPNLQFLEMPSCNI-----DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
             + I  C ++  L   S NI     +GT  +E PSS   L+K                L 
Sbjct: 768  LVDISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRK----------------LI 811

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
             L +  C +    P    N++    L +DGTAIRE+P  +  L  L +L L+NC + E +
Sbjct: 812  YLNLSGCSSITEFPKVSNNIK---ELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEIL 868

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPEI--PFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
             SSI  L+ +E + +S C   + FPE+  P   +    +E            +++  LPS
Sbjct: 869  PSSICTLRKLERLNLSGCLQFRDFPEVLEPMVCLRYLYLEE-----------TRITKLPS 917

Query: 405  SLCMFKSLTSLEIIDCKKLE--------RLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
             +   K L  LE+ +CK L         +L +   +L+ L +L ++G  I  VP SL   
Sbjct: 918  PIGNLKGLACLEVGNCKYLNDIECFVDLQLSERWVDLDYLRKLNLDGCHISVVPDSLG-- 975

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKG- 513
                                     L+SLE++D    NF  +P  I  L  L+ L ++  
Sbjct: 976  ------------------------CLSSLEVLDLSGNNFSTIPLSINKLSELQYLGLRNC 1011

Query: 514  TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
              +  +PE   +LS L+    +DN      ESLN L S  S  +  N  E I        
Sbjct: 1012 KRLESLPELPPRLSKLD----ADN-----CESLNYLGSSSSTVVKGNIFEFI-------- 1054

Query: 574  SLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
                   F N  +L RI + L       P      RL            ++L+++++   
Sbjct: 1055 -------FTNCLSLCRINQIL-------PYALKKFRLYTK-------RLHQLTDVLEGAC 1093

Query: 632  MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
                         S + PG   P+W  HQS GST++ +       +K +GF+ C V+A
Sbjct: 1094 -------------SFFLPGGVSPQWLSHQSWGSTVTCQLSSHWANSKFLGFSLCAVIA 1138



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 46/163 (28%)

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSV------SECCRH 698
            S  + G+  P+WF HQS GST++ +       ++ +GF+ C ++A          +C  H
Sbjct: 1295 SFRYHGDVTPEWFSHQSWGSTVTCQLSSHWANSEFLGFSLCAIIAFHSFKHSLQVKCTYH 1354

Query: 699  ESVE----DDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCK 754
               E     D  C L + + +RR                 ++SDHV +G   F      K
Sbjct: 1355 FRNEHGDSHDLYCYLHEEIDERR-----------------IDSDHVLVG---FDPCLVAK 1394

Query: 755  RSDEFF--------FHIDR--------SCCEVKKCGIHFVHAQ 781
              D F         F ++           C+V++CG+H + A+
Sbjct: 1395 EKDMFSEYSEIAVEFQLEDMNGNLLPLDVCQVQECGVHLLDAE 1437


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1281

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 204/690 (29%), Positives = 321/690 (46%), Gaps = 109/690 (15%)

Query: 6    SEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-N 60
            SE+  +   F  ++ L+LL F       +  VH   G+ +   +LRY  W  +PLKT+ +
Sbjct: 540  SEVFASDRAFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPS 599

Query: 61   ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                E LV L M  S + +LWD +Q L +LK++DL   K L ++PDLS A NLE L+L Y
Sbjct: 600  RFCPEFLVELCMSNSDLEKLWDGIQPLTNLKKMDLSRCKYLVEIPDLSKATNLEELNLSY 659

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            C SL E   SI+ L  L    +  C  L ++P  I  K L+ + + GCS+L + P+++  
Sbjct: 660  CQSLVEVTPSIKNLKGLSCFYMTNCIQLKNIPIGITLKSLETVRMSGCSSLMHFPEISWN 719

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
              R  L L    IEELPSSI  LS + EL +  C+RL  + S +  L  L+S+       
Sbjct: 720  TRR--LYLSSTKIEELPSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSL------- 770

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                     N+DG               C R E+LP       SL +LE+  C N    P
Sbjct: 771  ---------NLDG---------------CKRLENLPGTLQNLTSLETLEVSGCLNVNEFP 806

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
                N++ L    I  T+I E+P  +  L+ L  L++     L+ +  SI KL+S+E ++
Sbjct: 807  RVATNIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLK 863

Query: 361  ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
            +S CS                                 LES P  +C   S      +D 
Sbjct: 864  LSGCS--------------------------------VLESFPPEICQTMSCLRWFDLDR 891

Query: 421  KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
              ++ LP+ +GNL ALE L+   T IR  P+S+A+  L++L++    +    P  L    
Sbjct: 892  TSIKELPENIGNLVALEVLQASRTVIRRAPRSIAR--LTRLQVLAIGNSLYTPEGL---- 945

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
             L SL    C    R  D       L+ L++    + E+P S+G L +L  + LS N+ +
Sbjct: 946  -LHSL----CPPLARFDD-------LRALSLSNMNMVEIPNSIGNLWNLLEIDLSGNSFE 993

Query: 541  IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
             IP S+ +L+ L  L L+N   L+ +P+ L        L ++ +N   +      F    
Sbjct: 994  FIPASIKRLTRLNRLNLNNCQRLQALPDEL----PRGLLYIYIHNCTSLVSISGCFNQYC 1049

Query: 600  PSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
              +F +        NC KLD  + ++I+    MK     E+   +  YFPG++IP  F H
Sbjct: 1050 LRQFVA-------SNCYKLD--QAAQILIHCNMKL----ESAKPEHSYFPGSDIPSCFNH 1096

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
            Q  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 1097 QVMGPSLNIQLPQSESSSDILGFSACIMIG 1126


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 177/518 (34%), Positives = 273/518 (52%), Gaps = 56/518 (10%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPF--TELRYFEWHQFPL 56
            +SKI  EI+++     +M +LRLLK   S+   KC VH   G+     ELRY  W  +PL
Sbjct: 535  VSKIR-EIELSSTALERMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPL 593

Query: 57   KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             +L +    +NLV + +  SKV +LW   QNLV+LK ++L   + +T +PDLS A+NLE 
Sbjct: 594  TSLPSNFRPQNLVEINLSCSKVNRLWRGHQNLVNLKDVNLSNCEHITFMPDLSKARNLER 653

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L+L +C+SL +  SS+Q+L+KL  LDL  CK L +LP+ I+S  L+ L + GC+NLK  P
Sbjct: 654  LNLQFCTSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNVSGCANLKKCP 713

Query: 176  ----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                K+T  +L  T       +EELP SI  L+ +  L + +CK L N+  +++ L+ L 
Sbjct: 714  ETARKLTYLNLNET------AVEELPQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLL 767

Query: 232  SIRIHRCPNLQFLEMPSCNI-----DGTRSKEQPSS--------ELKLKKCPRPESLPSG 278
               I  C ++  L   S NI     +GT  +E PSS         L L  C R ++LPS 
Sbjct: 768  IADISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSA 827

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
                  L  L++  C N    P ++ N   +  L ++GTAIRE+P  +  L  L++L L+
Sbjct: 828  VSKLVCLEKLDLSGCSNITEFP-KVSN--TIKELYLNGTAIREIPSSIECLFELAELHLR 884

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV- 390
            NC + E + SSI KL+ ++ + +S C   + FPE+        +  ++ + I ++PS + 
Sbjct: 885  NCKQFEILPSSICKLRKLQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIG 944

Query: 391  -------LKLNKCSKLESLPSSL-------CMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
                   L++  C  L  +   +       C    L  L +  C+  E +PD LG + +L
Sbjct: 945  NLKGLACLEVGNCQHLRDIECIVDLQLPERCKLDCLRKLNLDGCQIWE-VPDSLGLVSSL 1003

Query: 437  EELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            E L + G   R +P S+ +L  L  L L+ C + ESLP
Sbjct: 1004 EVLDLSGNNFRSIPISINKLFELQYLGLRNCRNLESLP 1041



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 163/614 (26%), Positives = 268/614 (43%), Gaps = 116/614 (18%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
            +L L+ C R  +LPS +     L +L +  C N ++ P+    L  LN   ++ TA+ EL
Sbjct: 677  DLDLRGCKRLINLPS-RINSSCLETLNVSGCANLKKCPETARKLTYLN---LNETAVEEL 732

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNI 378
            P+ +G+L  L  L LKNC  L  +  +++ LKS+   +IS CS++   P+    I +  +
Sbjct: 733  PQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRLPDFSRNIRYLYL 792

Query: 379  DGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            +G+ IE +PSS+        L L  C++L++LPS++     L  L++  C  +   P ++
Sbjct: 793  NGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLVCLEKLDLSGCSNITEFP-KV 851

Query: 431  GNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
             N   ++EL + GT IRE+P S+  L  L++L L+ C  FE LPS +   + L  L +  
Sbjct: 852  SN--TIKELYLNGTAIREIPSSIECLFELAELHLRNCKQFEILPSSICKLRKLQRLNLSG 909

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD------------- 536
            C  F   P+ +  +  L+ L ++ T I ++P  +G L  L  L + +             
Sbjct: 910  CVQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCQHLRDIECIVDL 969

Query: 537  ----------------NNLQI--IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
                            +  QI  +P+SL  +SSL  L LS NN   IP  ++ L  L+YL
Sbjct: 970  QLPERCKLDCLRKLNLDGCQIWEVPDSLGLVSSLEVLDLSGNNFRSIPISINKLFELQYL 1029

Query: 579  DLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG------- 630
             L    NL+ +PE        +P   + L    D  NC  L     S    +G       
Sbjct: 1030 GLRNCRNLESLPE--------LPPRLSKL----DADNCWSLRTVSCSSTAVEGNIFEFIF 1077

Query: 631  -----------WMKQSVNGETYITKSMY--------------FPGNEIPKWFRHQSTGST 665
                        ++ S+      TK +Y               PG+  P+WF HQS GS 
Sbjct: 1078 TNCKRLRRINQILEYSLLKFQLYTKRLYHQLPDVPEEACSFCLPGDMTPEWFSHQSWGSI 1137

Query: 666  ISLKTPQPTGYNKLMGFAFCVVVACSV------SECCRHESVEDDRKCNLFDVVCDRRSE 719
            ++ +      + K +GF+ C V+A          +C  H   E     +L+  +      
Sbjct: 1138 VTFQLSSHWAHTKFLGFSLCAVIAFHSFSHSLQVKCTYHFHNEHGDSHDLYCYLHVCYGN 1197

Query: 720  GYDSYTSSYLGKISHVESDHVFLG--SSIFAGENS-----CKRSDEF------FFHIDRS 766
                Y   + G+   + S H+F+G    + A EN       + S EF       + +   
Sbjct: 1198 DLYCYLHDWYGE-KRINSKHIFVGLDPCLVAKENDMFSKYSEVSVEFQLEDMNGYLLPLD 1256

Query: 767  CCEVKKCGIHFVHA 780
             C+V +CG+  +HA
Sbjct: 1257 LCQVVECGVRLLHA 1270



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 16/104 (15%)

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLK-TPQPTGYNKLMGFAFCVVVA-CSVSECCRHESVE 702
            S Y PG+  P+WF HQ  GST++   + Q       +GF  C V+A CS     +     
Sbjct: 1355 SFYLPGDVTPEWFSHQRWGSTVTFHLSSQWANSKSFLGFCLCAVIAFCSFGHSLQ----- 1409

Query: 703  DDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH---VESDHVFLG 743
               KC      C+   + +D Y   YL        + S H+F+G
Sbjct: 1410 --VKCTYH--FCNEHGDSHDLYF--YLRDWYDKECINSTHIFVG 1447


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 229/795 (28%), Positives = 362/795 (45%), Gaps = 136/795 (17%)

Query: 6    SEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTLNI 61
            SE+  +   F  ++ L+LL F       +  VH   G+ +   +LRY  W  +PLKT+  
Sbjct: 539  SEVFASDRAFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPS 598

Query: 62   LHW-ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
              + E LV L M  S + +LWD +Q L +LK++DL   K L ++PDLS A NLE L+L Y
Sbjct: 599  RFFPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSY 658

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            C SL E   SI+ L  L    L  C  L  +P  I  K L+ + + GCS+LK+ P+++  
Sbjct: 659  CQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPEISWN 718

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
              R  L L    IEELPSSI  LS + +L +  C+RL  + S +  L  L+S+       
Sbjct: 719  TRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL------- 769

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                     N+DG               C R E+LP       SL +LE+  C N    P
Sbjct: 770  ---------NLDG---------------CRRLENLPDTLQNLTSLETLEVSGCLNVNEFP 805

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
                +++ L    I  T+I E+P  +  L+ L  L++     L  +  SI +L+S+E ++
Sbjct: 806  RVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLK 862

Query: 361  ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
            +S C                                S LES P  +C   S      +D 
Sbjct: 863  LSGC--------------------------------SVLESFPLEICQTMSCLRWFDLDR 890

Query: 421  KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
              ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++    +    P  L    
Sbjct: 891  TSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQVLAIGNSFFTPEGL---- 944

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
             L SL    C    R  D       L+ L++    + E+P S+G L +L  L LS NN +
Sbjct: 945  -LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSIGNLWNLLELDLSGNNFE 992

Query: 541  IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT-- 597
             IP S+ +L+ L  L L+N   L+ +P+ L     L Y+            Y+ S  +  
Sbjct: 993  FIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI------------YIHSCTSLV 1038

Query: 598  SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
            SI   F    L  +   NC KLD  + ++I+    + +++  E+   +  YFPG++IP  
Sbjct: 1039 SISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLESAKPEHSYFPGSDIPTC 1092

Query: 657  FRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS----VSECCRHES--VEDDRKCNLF 710
            F HQ  G +++++ PQ    + ++GF+ C+++       ++    H S  ++D   C L 
Sbjct: 1093 FNHQVMGPSLNIQLPQSESSSDILGFSACIMIGVDGQYPMNNLKIHCSCILKDADACELV 1152

Query: 711  DVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRS---- 766
             V+ +       ++T+ Y G      SDH+ L S       +   +  F F ++ +    
Sbjct: 1153 -VMDEVWYPDPKAFTNMYFG------SDHLLLFSRTCTSMEAYSEA-LFEFSVENTEGDS 1204

Query: 767  ---CCEVKKCGIHFV 778
                 EVKKC +H +
Sbjct: 1205 FSPLGEVKKCAVHLI 1219


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1294

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 229/795 (28%), Positives = 362/795 (45%), Gaps = 136/795 (17%)

Query: 6    SEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTLNI 61
            SE+  +   F  ++ L+LL F       +  VH   G+ +   +LRY  W  +PLKT+  
Sbjct: 538  SEVFASDRAFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPS 597

Query: 62   LHW-ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
              + E LV L M  S + +LWD +Q L +LK++DL   K L ++PDLS A NLE L+L Y
Sbjct: 598  RFFPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSY 657

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            C SL E   SI+ L  L    L  C  L  +P  I  K L+ + + GCS+LK+ P+++  
Sbjct: 658  CQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPEISWN 717

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
              R  L L    IEELPSSI  LS + +L +  C+RL  + S +  L  L+S+       
Sbjct: 718  TRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL------- 768

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                     N+DG               C R E+LP       SL +LE+  C N    P
Sbjct: 769  ---------NLDG---------------CRRLENLPDTLQNLTSLETLEVSGCLNVNEFP 804

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
                +++ L    I  T+I E+P  +  L+ L  L++     L  +  SI +L+S+E ++
Sbjct: 805  RVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLK 861

Query: 361  ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
            +S C                                S LES P  +C   S      +D 
Sbjct: 862  LSGC--------------------------------SVLESFPLEICQTMSCLRWFDLDR 889

Query: 421  KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
              ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++    +    P  L    
Sbjct: 890  TSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQVLAIGNSFFTPEGL---- 943

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
             L SL    C    R  D       L+ L++    + E+P S+G L +L  L LS NN +
Sbjct: 944  -LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSIGNLWNLLELDLSGNNFE 991

Query: 541  IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT-- 597
             IP S+ +L+ L  L L+N   L+ +P+ L     L Y+            Y+ S  +  
Sbjct: 992  FIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI------------YIHSCTSLV 1037

Query: 598  SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
            SI   F    L  +   NC KLD  + ++I+    + +++  E+   +  YFPG++IP  
Sbjct: 1038 SISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLESAKPEHSYFPGSDIPTC 1091

Query: 657  FRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS----VSECCRHES--VEDDRKCNLF 710
            F HQ  G +++++ PQ    + ++GF+ C+++       ++    H S  ++D   C L 
Sbjct: 1092 FNHQVMGPSLNIQLPQSESSSDILGFSACIMIGVDGQYPMNNLKIHCSCILKDADACELV 1151

Query: 711  DVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRS---- 766
             V+ +       ++T+ Y G      SDH+ L S       +   +  F F ++ +    
Sbjct: 1152 -VMDEVWYPDPKAFTNMYFG------SDHLLLFSRTCTSMEAYSEA-LFEFSVENTEGDS 1203

Query: 767  ---CCEVKKCGIHFV 778
                 EVKKC +H +
Sbjct: 1204 FSPLGEVKKCAVHLI 1218


>gi|104647005|gb|ABF74126.1| disease resistance protein [Arabidopsis thaliana]
          Length = 586

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 193/650 (29%), Positives = 306/650 (47%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L ++P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISYNTRR--LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    N++ L    I  T+I  +P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTNIEVLR---ISETSIEAIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
                  ++ +  Y S+ L             L   +   + L+ L++    + E+P S+
Sbjct: 353 L------AIGNSFYTSEGL----------LHSLCPPLSRFDDLRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QATQIL----IHRNMKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 230/796 (28%), Positives = 353/796 (44%), Gaps = 153/796 (19%)

Query: 7    EIQINPYTFSKMTELRLLK-FCGSKN-----KCMVHSLEGVPF-TELRYFEWHQFPLKTL 59
            EIQ +   F+ M +LRLLK +C  ++     +  VH  +   F  +LRY  W +  L++L
Sbjct: 568  EIQFSTEVFATMKQLRLLKIYCNDRDGLTREEYRVHLPKDFEFPHDLRYIHWQRCTLRSL 627

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
             +    E L+ + +  S + +LW   + L  LK IDL  SK L K+P+ S   NLE L+L
Sbjct: 628  PSSFCGEQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNL 687

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
              C+SL E HSSI  L +L  L+L  C+ L S PT++  + L+ L L  C  LK +PK+ 
Sbjct: 688  EGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLKKIPKIL 747

Query: 179  S--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
                HL+  L L G GI+ELP SI  L ++  L + +C + E         +F E     
Sbjct: 748  GNMGHLKK-LCLNGSGIKELPDSIGYLESLEILDLSNCSKFE---------KFPEIRGNM 797

Query: 237  RCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPE--------------- 273
            +C       +   ++D T  KE P+S         L L+KC + E               
Sbjct: 798  KC-------LKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLIL 850

Query: 274  --------SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
                     LP      + L  L++  C  FE+ P+  GN++ L RL +D TAI+ELP  
Sbjct: 851  NLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNS 910

Query: 326  LGQLALLSKLELKNCSELEYIS-----------------------SSIFKLKSVESIEIS 362
            +G +  L  L L+ CS+ E  S                        SI  L+S+  +++S
Sbjct: 911  IGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLS 970

Query: 363  NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
            NCS  + F EI + N+    +  +  + +K         LP+S+   + L  L++  C  
Sbjct: 971  NCSKFEKFSEIQW-NMKFLRVLYLKHTTIK--------ELPNSIGCLQDLEILDLDGCSN 1021

Query: 423  LERLPD---ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYV 478
            LERLP+   ++GNL AL    + GT I+ +P S+     L  L L+ C +  SLP  +  
Sbjct: 1022 LERLPEIQKDMGNLRALS---LAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLPD-ICG 1077

Query: 479  SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-N 537
             KSL  L II C N     +   ++E LK L ++ T I E+P S+  L  L+ L L +  
Sbjct: 1078 LKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCK 1137

Query: 538  NLQIIPESLNQLSSLVSLKLSN--------NNLE-------------------RIPERLD 570
            NL  +P S+  L+ L  L++ N        +NL                     IP  L 
Sbjct: 1138 NLVALPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEGEIPSDLW 1197

Query: 571  PLSSLKYLDLFENNLDRIPEYLRSF----------------PTSIPSEFTSLRLSVDLRN 614
             LSSL+ L + EN++  IP  +                      +PS  T +    + R 
Sbjct: 1198 CLSSLESLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYM----EARG 1253

Query: 615  CLKLDPNELSEIIKDG---WMKQSVNGETYITKSMYFPGNE-IPKWFRHQSTGSTISLKT 670
            C  L+    S  +      + K ++    +  +    PG+  IP+W  HQ  G  + ++ 
Sbjct: 1254 CPCLETETFSSPLWSSLLKYFKSAIQSTFFGPRRFVIPGSSGIPEWVSHQRIGCEVRIEL 1313

Query: 671  PQPTGY--NKLMGFAF 684
            P    Y  N  +GF  
Sbjct: 1314 PM-NWYEDNNFLGFVL 1328


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 217/703 (30%), Positives = 353/703 (50%), Gaps = 60/703 (8%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL-NILH 63
            E+ I+   F  M+ L+  +F    +   +H  +G+ +   +LR   W  +P+ +L +  +
Sbjct: 610  ELNISDRVFEGMSNLQFFRF-DENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFN 668

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             + LV + +  S++ +LW+ +Q LV+LK +DL+YS  L +LP+LS A NL  + L  CSS
Sbjct: 669  LKFLVKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSS 728

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHL 182
            L E  SSI     ++ LD+  C SL  LP+SI +   L RL L GCS+L  LP      +
Sbjct: 729  LIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLI 788

Query: 183  R-STLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                L L+G   + ELPSSI  L N+     + C  L  + SSI  L  L+ + + R  +
Sbjct: 789  NLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISS 848

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            L  +E+PS     +         L L  C     LPS      +L  L++  C +   LP
Sbjct: 849  L--VEIPS-----SIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELP 901

Query: 301  DELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
              +GNL  L  L + + +++ ELP  +G L  L  L L  CS L  + SSI  L +++ +
Sbjct: 902  LSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQEL 961

Query: 360  EISNCSNLKGFPE-----IPFCNIDGSG---IERIPSSV--------LKLNKCSKLESLP 403
             +S CS+L   P      I    +D SG   +  +P S+        L L++CS L  LP
Sbjct: 962  YLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELP 1021

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKL 461
            SS+    +L  L + +C  L  LP  +GNL  L++L + G + + E+P S+  L  L  L
Sbjct: 1022 SSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTL 1081

Query: 462  KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVP 520
             L  CSS   LPS +  + +L  L++  C + + LP  IGNL  LK L + G +++ E+P
Sbjct: 1082 NLSGCSSLVELPSSIG-NLNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELP 1140

Query: 521  ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
             S+G L +L+ L LS+ ++L  +P S+  L +L  L LS  ++L  +P  +  L +LK L
Sbjct: 1141 LSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKL 1200

Query: 579  DLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
            DL +     +L ++P+ L            ++   F + ++ +   +C KL+      I+
Sbjct: 1201 DLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQVWLKFIDCWKLNEKGRDIIV 1260

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQS-TGSTISLK 669
                       +T  +     PG E+P +F +++ TG ++++K
Sbjct: 1261 -----------QTSTSNYTMLPGREVPAFFTYRATTGGSLAVK 1292


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 217/703 (30%), Positives = 353/703 (50%), Gaps = 60/703 (8%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL-NILH 63
            E+ I+   F  M+ L+  +F    +   +H  +G+ +   +LR   W  +P+ +L +  +
Sbjct: 608  ELNISDRVFEGMSNLQFFRF-DENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFN 666

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             + LV + +  S++ +LW+ +Q LV+LK +DL+YS  L +LP+LS A NL  + L  CSS
Sbjct: 667  LKFLVKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSS 726

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHL 182
            L E  SSI     ++ LD+  C SL  LP+SI +   L RL L GCS+L  LP      +
Sbjct: 727  LIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLI 786

Query: 183  R-STLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                L L+G   + ELPSSI  L N+     + C  L  + SSI  L  L+ + + R  +
Sbjct: 787  NLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISS 846

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            L  +E+PS     +         L L  C     LPS      +L  L++  C +   LP
Sbjct: 847  L--VEIPS-----SIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELP 899

Query: 301  DELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
              +GNL  L  L + + +++ ELP  +G L  L  L L  CS L  + SSI  L +++ +
Sbjct: 900  LSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQEL 959

Query: 360  EISNCSNLKGFPE-----IPFCNIDGSG---IERIPSSV--------LKLNKCSKLESLP 403
             +S CS+L   P      I    +D SG   +  +P S+        L L++CS L  LP
Sbjct: 960  YLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELP 1019

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKL 461
            SS+    +L  L + +C  L  LP  +GNL  L++L + G + + E+P S+  L  L  L
Sbjct: 1020 SSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTL 1079

Query: 462  KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVP 520
             L  CSS   LPS +  + +L  L++  C + + LP  IGNL  LK L + G +++ E+P
Sbjct: 1080 NLSGCSSLVELPSSIG-NLNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELP 1138

Query: 521  ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
             S+G L +L+ L LS+ ++L  +P S+  L +L  L LS  ++L  +P  +  L +LK L
Sbjct: 1139 LSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKL 1198

Query: 579  DLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
            DL +     +L ++P+ L            ++   F + ++ +   +C KL+      I+
Sbjct: 1199 DLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFPNPQVWLKFIDCWKLNEKGRDIIV 1258

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQS-TGSTISLK 669
                       +T  +     PG E+P +F +++ TG ++++K
Sbjct: 1259 -----------QTSTSNYTMLPGREVPAFFTYRATTGGSLAVK 1290


>gi|104646971|gb|ABF74109.1| disease resistance protein [Arabidopsis thaliana]
          Length = 584

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 192/650 (29%), Positives = 306/650 (47%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLK++ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKSMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L ++P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISYNTRR--LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    N++ L    I  T+I  +P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTNIEVLR---ISETSIEAIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
                  ++ +  Y S+ L             L   +   + L+ L++    + E+P S+
Sbjct: 353 L------AIGNSFYTSEGL----------LHSLCPPLSRFDDLRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QATQIL----IHRNMKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646939|gb|ABF74093.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTLNILHW-ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+    + E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFFPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646997|gb|ABF74122.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTLNILHW-ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+    + E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFFPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646925|gb|ABF74086.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646929|gb|ABF74088.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646935|gb|ABF74091.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646951|gb|ABF74099.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646959|gb|ABF74103.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646961|gb|ABF74104.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646983|gb|ABF74115.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646989|gb|ABF74118.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647017|gb|ABF74132.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647023|gb|ABF74135.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647027|gb|ABF74137.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647035|gb|ABF74141.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104647019|gb|ABF74133.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647021|gb|ABF74134.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLSRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646987|gb|ABF74117.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 306/650 (47%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI+ LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSIRRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104647033|gb|ABF74140.1| disease resistance protein [Arabidopsis thaliana]
          Length = 583

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPXXICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646927|gb|ABF74087.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646941|gb|ABF74094.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646945|gb|ABF74096.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646947|gb|ABF74097.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646953|gb|ABF74100.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646955|gb|ABF74101.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646957|gb|ABF74102.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646963|gb|ABF74105.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646969|gb|ABF74108.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646993|gb|ABF74120.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647013|gb|ABF74130.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647015|gb|ABF74131.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647029|gb|ABF74138.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 304/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEE PSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYFLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646937|gb|ABF74092.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646967|gb|ABF74107.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646995|gb|ABF74121.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647009|gb|ABF74128.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646931|gb|ABF74089.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646933|gb|ABF74090.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 304/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCXRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646973|gb|ABF74110.1| disease resistance protein [Arabidopsis thaliana]
          Length = 584

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646975|gb|ABF74111.1| disease resistance protein [Arabidopsis thaliana]
          Length = 585

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 304/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEE PSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYFLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646977|gb|ABF74112.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646979|gb|ABF74113.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646981|gb|ABF74114.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646991|gb|ABF74119.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 303/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEE PSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++      E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMXXTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYFLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104647011|gb|ABF74129.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104646999|gb|ABF74123.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 305/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLFRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GN+ ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNIVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104647031|gb|ABF74139.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 303/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEE PSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGXLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN   IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFXFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYFLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 206/701 (29%), Positives = 334/701 (47%), Gaps = 124/701 (17%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPF--TELRYFEWHQFPL 56
            MS++ SE+  +   F  ++ L+LL F       +  VH   G+ +   +LRY  W  +PL
Sbjct: 537  MSEV-SEVLASDQGFEGLSNLKLLNFYDLSYDGETRVHLPNGLTYLPRKLRYLRWDGYPL 595

Query: 57   KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             +L +  H E LV L M  S +  LW+ +Q L  LK++DL   K L ++PDLS A NLE 
Sbjct: 596  NSLPSRFHPEFLVELFMSNSHLHYLWNGIQPLRKLKKMDLSRCKYLIEIPDLSKATNLEE 655

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L+L YC SLTE   SI+ L KL    L  C  L  +P+ I  K L+ + + GCS+L + P
Sbjct: 656  LNLSYCQSLTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGIALKSLETVGMNGCSSLMHFP 715

Query: 176  KMTSCHLRSTLPLLGVGIEELPSS-IKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
            + +    R  L L    IEELPSS I  LS + EL +  C+ +  + SS+  L  L+S+ 
Sbjct: 716  EFSWNARR--LYLSSTKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLS 773

Query: 235  IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            ++ C +L+ L                           P+SL S  C    L +LE+  C 
Sbjct: 774  LNGCKHLENL---------------------------PDSLLSLTC----LETLEVSGCL 802

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            N    P    N++ L    I  T+I E+P  +  L+ L  L++    +L+ +  SI +L+
Sbjct: 803  NINEFPRLAKNIEVLR---ISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELR 859

Query: 355  SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            S+E +                                KL+ C  LESLP  +C  ++++ 
Sbjct: 860  SLEKL--------------------------------KLSGCCVLESLPPEIC--QTMSC 885

Query: 415  LEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESL 472
            L  +D ++  ++ LP+ +GNL ALE L+   T IR  P S+A+  L +L++       ++
Sbjct: 886  LRWLDLERTSIKELPENIGNLIALEVLQAGRTAIRRAPLSIAR--LERLQVL------AI 937

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
             +  Y S+ L SL    C +     D       L+ L +    + E+P S+G L SL  L
Sbjct: 938  GNSFYTSQGLHSL----CPHLSIFND-------LRALCLSNMNMIEIPNSIGNLWSLSEL 986

Query: 533  VLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
             LS NN + IP S+ +L+ L  L ++N   L+ +P+ L      + L ++ +    +   
Sbjct: 987  DLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQALPDDL----PRRLLYIYAHGCTSL--- 1039

Query: 592  LRSFPTSIPSEFTS--LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFP 649
                  SI   F    LR  V   NC KLD    ++I+    + +++  +    +  YFP
Sbjct: 1040 -----VSISGCFKPCCLRKLV-ASNCYKLDQE--AQIL----IHRNMKLDAAKPEHSYFP 1087

Query: 650  GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVAC 690
            G ++P  F HQ+ GS++ ++ P     + ++GF+ C+++  
Sbjct: 1088 GRDVPSCFNHQAMGSSLRIRQPS----SDILGFSACIMIGV 1124


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 206/733 (28%), Positives = 343/733 (46%), Gaps = 111/733 (15%)

Query: 14   TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMP 73
             F+KMT LRLLK         VHS  GV +        H F     +    E LV L + 
Sbjct: 673  VFAKMTSLRLLK---------VHS--GVYY--------HHFEDFLPSNFDGEKLVELHLK 713

Query: 74   GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
             S + QLW   ++L  LK IDL  S+ L ++ + S   NLE L L  C SL + H S+  
Sbjct: 714  CSNIKQLWQGHKDLERLKVIDLSCSRNLIQMSEFSSMPNLERLILEGCVSLIDIHPSVGN 773

Query: 134  LNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLG 190
            + KL  L L  C  L +LP SI + + L+ L L  CS     P+    +++S   L L  
Sbjct: 774  MKKLTTLSLRFCDQLKNLPDSIGYLESLESLDLSDCSKFVKFPE-KGGNMKSLMKLDLRF 832

Query: 191  VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRC 238
              I++LP SI  L ++  L +  C + E        ++ L  +             I   
Sbjct: 833  TAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSIGDL 892

Query: 239  PNLQFLEMPSCNIDGTRSKEQPSSELKLK-------KCPRPESLPSGQCMFKSLTSLEII 291
             +L FL +  C    ++ ++ P     +K       +    + LP      +SL  L++ 
Sbjct: 893  ESLMFLNLSGC----SKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDLESLRLLDLS 948

Query: 292  DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
             C  FE+ P++ GN+++L  L +  TAI++LP+ +G L  L  L+L +CS+ E       
Sbjct: 949  GCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGG 1008

Query: 352  KLKSVESIEISNCSNLKGFPE--------IPFCNIDGSGIERIP------SSVLKLN-KC 396
             +KS++ + ++N + +K  P+        +     D S  E+ P       S++KL+ + 
Sbjct: 1009 NMKSLKWLYLTNTA-IKDLPDSIGDLESLLSLHLSDCSKFEKFPEKGGNMKSLMKLDLRY 1067

Query: 397  SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            + ++ LP S+   +SL  L++ DC K E+ P++ GN+++L++L +  T I+++P S+  L
Sbjct: 1068 TAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMKSLKKLFLRNTAIKDLPDSIGDL 1127

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
                                   +SL SL++ DC  F + P++ GN++ L  L +  TAI
Sbjct: 1128 -----------------------ESLESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTAI 1164

Query: 517  REVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
            +++P+S+G L SL++LVLSD +  +  PE    + SL+ L L N  ++ +P  +  L +L
Sbjct: 1165 KDLPDSIGDLESLKFLVLSDCSKFEKFPEKGGNMKSLIHLDLKNTAIKDLPTNISRLKNL 1224

Query: 576  KYL------DLFEN-------NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL-KLDPN 621
            + L      DL+E        NL ++          I    +SL+  +D   C  K D +
Sbjct: 1225 ERLMLGGCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLQ-EIDAYPCTSKEDLS 1283

Query: 622  ELSEIIKDGWMKQSVNGETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGYNK-- 678
             L  +    W+K +             P  N IP+W R+Q+ GS ++  T  PT + +  
Sbjct: 1284 GLLWLCHLNWLKSTTEELKCWKLGAVIPESNGIPEWIRYQNMGSEVT--TELPTNWYEDP 1341

Query: 679  -LMGFAFCVVVAC 690
              +GF    VV+C
Sbjct: 1342 DFLGF----VVSC 1350



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 131/538 (24%), Positives = 232/538 (43%), Gaps = 100/538 (18%)

Query: 8    IQINPYT--FSKMTELRLLKFCGS-----KNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
            I I+P      K+T L L +FC        +   + SLE +  ++   F   +FP K  N
Sbjct: 765  IDIHPSVGNMKKLTTLSL-RFCDQLKNLPDSIGYLESLESLDLSDCSKFV--KFPEKGGN 821

Query: 61   ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-------------- 106
            +   ++L+ L +  + +  L D + +L SL+ ++L +     K P+              
Sbjct: 822  M---KSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLR 878

Query: 107  ----------LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH 156
                      +   ++L  L+L  CS   +       +  L  LDL R  ++  LP SI 
Sbjct: 879  NTAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDL-RYTAIKDLPDSIG 937

Query: 157  S-KYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYS 213
              + L+ L L GCS  +  P+    +++S   L L    I++LP SI  L ++  L +  
Sbjct: 938  DLESLRLLDLSGCSKFEKFPEKGG-NMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSD 996

Query: 214  CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL-KLKKCPRP 272
            C + E       K   ++S++     N    ++P    D         S+  K +K P  
Sbjct: 997  CSKFEKFPE---KGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSKFEKFPEK 1053

Query: 273  -----------------ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                             + LP      +SL  L++ DC  FE+ P++ GN+++L +L + 
Sbjct: 1054 GGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMKSLKKLFLR 1113

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
             TAI++LP+ +G L  L  L+L +CS+ E        +KS+  ++++N +          
Sbjct: 1114 NTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTA---------- 1163

Query: 376  CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                                   ++ LP S+   +SL  L + DC K E+ P++ GN+++
Sbjct: 1164 -----------------------IKDLPDSIGDLESLKFLVLSDCSKFEKFPEKGGNMKS 1200

Query: 436  LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS-FESLPSRLYVSKSLTSLEIIDCK 491
            L  L ++ T I+++P ++++L  L +L L  CS  +E L S      +L  L I  CK
Sbjct: 1201 LIHLDLKNTAIKDLPTNISRLKNLERLMLGGCSDLWEGLISNQLC--NLQKLNISQCK 1256



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 148/307 (48%), Gaps = 33/307 (10%)

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
           L+L     + + S+   K+ S+  +++ +      F +    N DG  +  +        
Sbjct: 659 LDLSKLKRVCFDSNVFAKMTSLRLLKVHSGVYYHHFEDFLPSNFDGEKLVELHL------ 712

Query: 395 KCSKLESLPSSLCMFKSLTSLEIID--CKKLERLPDELGNLEALEELRVEG-TGIREVPK 451
           KCS ++ L       K L  L++ID  C +      E  ++  LE L +EG   + ++  
Sbjct: 713 KCSNIKQLWQG---HKDLERLKVIDLSCSRNLIQMSEFSSMPNLERLILEGCVSLIDIHP 769

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           S+  +  L+ L L+ C   ++LP  +   +SL SL++ DC  F++ P++ GN++ L  L 
Sbjct: 770 SVGNMKKLTTLSLRFCDQLKNLPDSIGYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLD 829

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           ++ TAI+++P+S+G L SLE L LS  +  +  PE    + SL  L L N  ++ +P+ +
Sbjct: 830 LRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSI 889

Query: 570 DPLSSLKYLDLFE-NNLDRIPE----------------YLRSFPTSIPSEFTSLRLSVDL 612
             L SL +L+L   +  ++ PE                 ++  P SI  +  SLRL +DL
Sbjct: 890 GDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSI-GDLESLRL-LDL 947

Query: 613 RNCLKLD 619
             C K +
Sbjct: 948 SGCSKFE 954


>gi|104646949|gb|ABF74098.1| disease resistance protein [Arabidopsis thaliana]
          Length = 585

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 191/650 (29%), Positives = 299/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L ++P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISYNTRR--LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    N++ L    I  T+I  +P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTNIEVLR---ISETSIEAIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
                  ++ +  Y S+ L             L   +   + L+ L++    + E+P S+
Sbjct: 353 L------AIGNSFYTSEGL----------LHSLCPPLSRFDDLRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC K        I       +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKXXXXXXXLI------HRNMKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHXYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 246/847 (29%), Positives = 370/847 (43%), Gaps = 158/847 (18%)

Query: 67   LVSLKMPG--SKVTQLWD--DVQNLVS-------LKRIDLKYSKLLTKLPDLSLAQNLEI 115
            +V  + PG  SK ++LWD  D+ +  S       LK IDL  SK L K+P  S   NLE 
Sbjct: 498  IVRDEYPGDPSKWSRLWDVDDIYDAFSRQEFLGKLKVIDLSDSKQLVKMPKFSSMPNLER 557

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L+L  C SL E H SI  L +L  L+L  C+ L S P  +  + L+ L L  C NLK  P
Sbjct: 558  LNLEGCISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLDRCQNLKKFP 617

Query: 176  KMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            K+     HL+  L L    I+ELPSSI  L+++  L + +C  LE        ++FL  +
Sbjct: 618  KIHGNMGHLKE-LYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLREL 676

Query: 234  RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
             +  C   +        ++  R      S +K         LPS     +SL  L++  C
Sbjct: 677  HLEGCSKFEKFSDTFTYMEHLRGLHLGESGIK--------ELPSSIGYLESLEILDLSYC 728

Query: 294  PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS------ 347
              FE+ P+  GN++ L  L +D TAI+ELP  +G L  L  L LK C + E  S      
Sbjct: 729  SKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNM 788

Query: 348  -----------------SSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSG 382
                             +SI  L+S+E + +S CSN + FPEI          C ++ + 
Sbjct: 789  GLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELC-LENTA 847

Query: 383  IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
            I+ +P+ +        L L+ CS  E  P        L +L  +D   ++ LP  +G+L 
Sbjct: 848  IKELPNGIGCLQALESLALSGCSNFERFPE--IQMGKLWAL-FLDETPIKELPCSIGHLT 904

Query: 435  ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFES--------------------- 471
             L+ L +E    +R +P S+  L +L +L L  CS+ E+                     
Sbjct: 905  RLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGI 964

Query: 472  --LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLS- 527
              LPS +   + L SLE+I+C+N + LP+ IG+L  L  L ++  T +R +P++L  L  
Sbjct: 965  TELPSLIGHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQC 1024

Query: 528  SLEWLVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
             L WL L   NL    IP  L  LS LVSL +S N++  IP  +  LS LK   LF N+ 
Sbjct: 1025 CLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLSKLKA--LFMNHC 1082

Query: 586  DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ----------- 634
              + E        +PS  T +    +   C  L+    S ++    +K+           
Sbjct: 1083 PMLEEI-----GEVPSSLTVM----EAHGCPSLETETFSSLLWSSLLKRFKSPIQPEFFE 1133

Query: 635  ---SVNGETYITK-SMYFPG-NEIPKWFRHQSTGSTISLKTPQPTGY--NKLMGFA-FCV 686
                ++ + Y  + S+  PG N IP+W  HQ  G  +S++ P    Y  +  +GF  F  
Sbjct: 1134 PNFFLDLDFYPQRFSILLPGSNGIPEWVSHQRMGCEVSIELPM-NWYEDDNFLGFVLFFH 1192

Query: 687  VVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD---------SYTSSYLGKISH-VE 736
             V     EC   E+ E         +    +SE  +         +Y +S+L    H  +
Sbjct: 1193 HVPLDDDEC---ETTEGSIPHCELTISHGDQSERLEEISFYFKCKTYLASHLLSGKHCYD 1249

Query: 737  SDH--------VFLGSSIFAGENSCKRSDEF--FFHI----------DRSCCEVKKCGIH 776
            SD          +        E   +R + F   FH           D +C +VK CGIH
Sbjct: 1250 SDSTPDPAIWVTYFPQIDIPSEYRSRRRNNFKDHFHTPIGVGSFKCGDNACFKVKSCGIH 1309

Query: 777  FVHAQRQ 783
             ++AQ Q
Sbjct: 1310 LLYAQDQ 1316



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 188/466 (40%), Gaps = 93/466 (19%)

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC- 121
            + E+L  L +  S + +L   +  L SL+ +DL Y     K P++    N++ L   Y  
Sbjct: 693  YMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIK--GNMKCLKELYLD 750

Query: 122  -SSLTETHSSIQYLNKLEVLDLDRC-----------------------KSLTSLPTSI-H 156
             +++ E  +S+  L  LE+L L  C                         +  LP SI +
Sbjct: 751  NTAIKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRESGIKELPNSIGY 810

Query: 157  SKYLKRLVLRGCSNLKNLPKMTSCHLR--STLPLLGVGIEELPSSIKCLSNIGELLIYSC 214
             + L+ L L  CSN +  P++   +L+    L L    I+ELP+ I CL  +  L +  C
Sbjct: 811  LESLEILNLSYCSNFQKFPEIQG-NLKCLKELCLENTAIKELPNGIGCLQALESLALSGC 869

Query: 215  KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKL 266
               E                  R P +Q  ++ +  +D T  KE P S         L L
Sbjct: 870  SNFE------------------RFPEIQMGKLWALFLDETPIKELPCSIGHLTRLKWLDL 911

Query: 267  KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
            + C    SLP+  C  KSL  L +  C N E   +   +++ L  L +  T I ELP  +
Sbjct: 912  ENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLI 971

Query: 327  GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
            G L  L  LEL NC  L  + +SI  L  + ++ + NC+ L+  P               
Sbjct: 972  GHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLP--------------- 1016

Query: 387  PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTG 445
                         ++L S  C    L  L++  C  +E  +P +L  L  L  L V    
Sbjct: 1017 -------------DNLRSLQC---CLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENH 1060

Query: 446  IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            IR +P  + QL+ L  L +  C   E +     V  SLT +E   C
Sbjct: 1061 IRCIPAGITQLSKLKALFMNHCPMLEEIGE---VPSSLTVMEAHGC 1103


>gi|104646965|gb|ABF74106.1| disease resistance protein [Arabidopsis thaliana]
          Length = 579

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 193/650 (29%), Positives = 300/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L ++P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISYNTRR--LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    N++ L    I  T+I  +P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTNIEVLR---ISETSIEAIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
                  ++ +  Y S+ L             L   +   + L+ L++          S+
Sbjct: 353 V------AIGNSFYTSEGL----------LHSLCPPLSRFDDLRALSLSNMNXXXXXNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    MK     E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QATQILIHRNMKL----E 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104647003|gb|ABF74125.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 195/650 (30%), Positives = 301/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEE PSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++        P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMXXXXXPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYFLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 186/565 (32%), Positives = 269/565 (47%), Gaps = 65/565 (11%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C + +S  S   M +SL  L +  C   ++ P+  GN++ L  L ++GTAI+ LP
Sbjct: 706  LNLEGCKKLKSFSSSIHM-ESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLP 764

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------C 376
              +  L  L+ L LK C  LE +  SIFKLKS++++ +SNC+ LK  PEI          
Sbjct: 765  LSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMEL 824

Query: 377  NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +DGSGI  +PSS+        L L  C KL SLP S C   SL +L +  C +L+ LPD
Sbjct: 825  FLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPD 884

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
             LG+L+ L EL  +G+G++EVP S+  L  L  L L  C   ES    +  S   +  E 
Sbjct: 885  NLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEE 944

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPES 545
                  +RLP   G L  L+VL ++   + E  +P  LG + SLE L LS N+   IP S
Sbjct: 945  ------LRLPSFSG-LYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFITIPAS 997

Query: 546  LNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFT 604
            L+ LS L SL L    +L+ +PE    + SL       ++   +  +  S       +F 
Sbjct: 998  LSGLSRLRSLTLEYCKSLQSLPELPSSVESLN-----AHSCTSLETFTCSSSAYTSKKFG 1052

Query: 605  SLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK---------------SMYFP 649
             LR   +  NC +L  N+ S+I+  G + + +   + I K               +   P
Sbjct: 1053 DLRF--NFTNCFRLGENQGSDIV--GAILEGIQLMSSIPKFLVPDRGIPTPHNEYNALVP 1108

Query: 650  GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV--ACSVSECCRHESVEDDRKC 707
            GN IP+WFRHQS G +++++ PQ     KLMG AFC  +    ++      E       C
Sbjct: 1109 GNRIPEWFRHQSVGCSVNIELPQHWYNTKLMGLAFCAALNFKGAMDGNPGTEPSSFGLVC 1168

Query: 708  NLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSC------KRSDEFF- 760
             L D  C   +  +  YT     K   +ESDH        A    C      K SD    
Sbjct: 1169 YLND--CFVETGLHSLYTPPEGSKF--IESDHTLFEYISLARLEICLGNWFRKLSDNVVA 1224

Query: 761  -FHIDRSCCEVKKCGIHFVHAQRQR 784
             F +  S  EVKKCGI  V+ + ++
Sbjct: 1225 SFALTGSDGEVKKCGIRLVYEEDEK 1249



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 185/613 (30%), Positives = 271/613 (44%), Gaps = 113/613 (18%)

Query: 7    EIQINPYTFSKMTELRLLKFCG------------------------------SKNKCMVH 36
            E+  +   F+KM  LRLLK C                               ++NK  ++
Sbjct: 542  ELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLY 601

Query: 37   SLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDL 95
                     LR   WH +PLK+  +  H E LV L M  S++ Q W+  +    LK I L
Sbjct: 602  EDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKL 661

Query: 96   KYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
             +S+ LTK+PD S   NL  L L  C+SL E H SI  L KL  L+L+ CK L S  +SI
Sbjct: 662  SHSQHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI 721

Query: 156  HSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS 213
            H + L+ L L GCS LK  P++     HL   L L G  I+ LP SI+ L+ +  L +  
Sbjct: 722  HMESLQILTLSGCSKLKKFPEVQGNMEHL-PNLSLEGTAIKGLPLSIENLTGLALLNLKE 780

Query: 214  CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSS--- 262
            CK LE++  SIFKL+ L+++ +  C  L+ L     N        +DG+   E PSS   
Sbjct: 781  CKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGC 840

Query: 263  -----ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
                  L LK C +  SLP   C   SL +L +  C   + LPD LG+LQ L  L  DG+
Sbjct: 841  LNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADGS 900

Query: 318  AIRELPEGLGQLALLSKLELKNCSELEYISSS-IFKLKSVESIEISNCSNLKGFPEIPFC 376
             ++E+P  +  L  L  L L  C   E  S + IF   S  + E+               
Sbjct: 901  GVQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEEL--------------- 945

Query: 377  NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE----RLPDELGN 432
                    R+PS                    F  L SL ++  ++       LP +LG+
Sbjct: 946  --------RLPS--------------------FSGLYSLRVLILQRCNLSEGALPSDLGS 977

Query: 433  LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSL-----TSLE 486
            + +LE L +       +P SL+ L+ L  L L+ C S +SLP      +SL     TSLE
Sbjct: 978  IPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLE 1037

Query: 487  IIDCKNFMRLPDEIGNLEY-----LKVLTIKGTAI-REVPESLGQLSSLEWLVLSDNNLQ 540
               C +      + G+L +      ++   +G+ I   + E +  +SS+   ++ D    
Sbjct: 1038 TFTCSSSAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPDRG-- 1095

Query: 541  IIPESLNQLSSLV 553
             IP   N+ ++LV
Sbjct: 1096 -IPTPHNEYNALV 1107



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 51/230 (22%)

Query: 387 PSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           P  +++LN C S+L+        F+ L S+++   + L ++PD  G              
Sbjct: 630 PEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSG-------------- 675

Query: 446 IREVPKSLAQLALSKLKLKKCSS------------------------FESLPSRLYVSKS 481
              VP       L +L LK C+S                         +S  S +++ +S
Sbjct: 676 ---VPN------LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHM-ES 725

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
           L  L +  C    + P+  GN+E+L  L+++GTAI+ +P S+  L+ L  L L +  +L+
Sbjct: 726 LQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLE 785

Query: 541 IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            +P S+ +L SL +L LSN   L+++PE  + + SL  L L  + +  +P
Sbjct: 786 SLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELP 835


>gi|359493394|ref|XP_002279512.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 244/837 (29%), Positives = 363/837 (43%), Gaps = 150/837 (17%)

Query: 67   LVSLKMPGS--KVTQLWD--DVQNLVS-------LKRIDLKYSKLLTKLPDLSLAQNLEI 115
            +V  + PG   K ++LWD  D+ +  S       LK IDL  SK L K+P  S   NLE 
Sbjct: 499  IVREESPGDPCKWSRLWDVDDIHDAFSKQERFEELKGIDLSNSKQLVKMPKFSSMPNLER 558

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L+L  C+SL E HSSI  L  L  L+L  C+ L S P+S+  + L+ L L  C NLK  P
Sbjct: 559  LNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFP 618

Query: 176  KM-TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
            K+  +      L L   GI+ELPSSI  L+++  L +  C   E        ++FL  + 
Sbjct: 619  KIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELY 678

Query: 235  IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            +  C   +       N   T +       L L+K    E LPS     +SL  L+I  C 
Sbjct: 679  LEGCSKFE-------NFPDTFTYMGHLRGLHLRKSGIKE-LPSSIGYLESLEILDISCCS 730

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS------- 347
             FE+ P+  GN++ L  L +  TAI+ELP  +G L  L  L L+ C + E  S       
Sbjct: 731  KFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMG 790

Query: 348  ----------------SSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIE 384
                             SI  L+S+E++ +S CSN + FPEI          ++D + I+
Sbjct: 791  RLRELCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIK 850

Query: 385  RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
            ++P+S+ +L                ++L SL +  C  LER P+   N+  L  L ++ T
Sbjct: 851  KLPNSIGRL----------------QALGSLTLSGCSNLERFPEIQKNMGNLWALFLDET 894

Query: 445  GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I  +P S+  L  L +L L+ C + +SLP+ +   KSL  L +  C N     +   ++
Sbjct: 895  AIEGLPYSVGHLTRLDRLNLENCKNLKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDM 954

Query: 504  EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NN 561
            E L+ L +  T I E+P S+  L  L+ L L +  NL  +P S+  L+ L SL + N   
Sbjct: 955  EQLERLFLCETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPK 1014

Query: 562  LERIPERLDPLS-SLKYLDLFENNL--DRIPEYL------------RSFPTSIPSEFTSL 606
            L  +P+ L  L   L  LDL   NL  + IP  L             S    IP+  T L
Sbjct: 1015 LHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISESRMRCIPAGITQL 1074

Query: 607  -RLSVDLRN-CLKLDPNELSEIIKD-----GWMKQ----SVNGETYITK----------- 644
             +L + L N C  L      E+I +     GW++     S+  ET  +            
Sbjct: 1075 CKLRILLMNHCPML------EVIGELPSSLGWIEAHGCPSLETETSSSLLWSSLLKHLKS 1128

Query: 645  ------SMYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY--NKLMGFA-FCVVVACSVSE 694
                  ++  PG+  IP+W  HQ  G  +S++ P    Y  N L+GF  F   V     E
Sbjct: 1129 PIQQQFNIIIPGSSGIPEWVSHQRMGCEVSVELPM-NWYEDNNLLGFVLFFHHVPLDDDE 1187

Query: 695  C---------CRHESVEDDRKCNLFDVVCDRRSEGYD----SYTSSYL--GKISHVESDH 739
            C         C+ E    D+   L ++      + Y     SY S+    G  S      
Sbjct: 1188 CVRTSGFIPHCKLEISHGDQSKRLDNIGFHPHCKTYWISGLSYGSTCYDSGSTSDPALWV 1247

Query: 740  VFLGSSIFAGENSCKRSDEFFFHIDR-------SCCE-----VKKCGIHFVHAQRQR 784
             +        +   ++ + F  H D        +C E     VK CGIH ++AQ Q+
Sbjct: 1248 TYFPQIGIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYAQDQK 1304



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 172/564 (30%), Positives = 245/564 (43%), Gaps = 114/564 (20%)

Query: 66   NLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC--- 121
            NL  L + G + + +L   + +L SL  ++L   + L   P     ++LE+L L  C   
Sbjct: 555  NLERLNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSMKFESLEVLYLNCCPNL 614

Query: 122  --------------------SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--KY 159
                                S + E  SSI YL  LEVL+L  C +    P  IH   K+
Sbjct: 615  KKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFP-EIHGNMKF 673

Query: 160  LKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
            L+ L L GCS  +N P   +   HLR  L L   GI+ELPSSI  L ++  L I  C + 
Sbjct: 674  LRELYLEGCSKFENFPDTFTYMGHLRG-LHLRKSGIKELPSSIGYLESLEILDISCCSKF 732

Query: 218  ENI-----SSSIFKLQFLESIRIHRCPN-------LQFLEMPSC-----------NIDGT 254
            E       +    K  +L    I   PN       L+ L +  C           N+   
Sbjct: 733  EKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRL 792

Query: 255  RS--------KEQPSS--------ELKLKKCPRPESLPSGQ----CM------------- 281
            R         KE P S         L L  C   E  P  Q    C+             
Sbjct: 793  RELCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKL 852

Query: 282  ------FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                   ++L SL +  C N ER P+   N+  L  L +D TAI  LP  +G L  L +L
Sbjct: 853  PNSIGRLQALGSLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDRL 912

Query: 336  ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
             L+NC  L+ + +SI +LKS+E + ++ CSNLK F EI     D   +ER       L  
Sbjct: 913  NLENCKNLKSLPNSICELKSLEGLSLNGCSNLKAFSEI---TEDMEQLER-------LFL 962

Query: 396  C-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSL 453
            C + +  LPSS+   + L SLE+I+C+ L  LP+ +GNL  L  L V     +  +P +L
Sbjct: 963  CETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1022

Query: 454  A--QLALSKLKLKKCSSF-ESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEYLKVL 509
               Q  L+ L L  C+   E +PS L+    L  L I + +  MR +P  I  L  L++L
Sbjct: 1023 RSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISESR--MRCIPAGITQLCKLRIL 1080

Query: 510  TIKGTAIREVPESLGQL-SSLEWL 532
             +    + EV   +G+L SSL W+
Sbjct: 1081 LMNHCPMLEV---IGELPSSLGWI 1101


>gi|224145341|ref|XP_002325608.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862483|gb|EEE99989.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1083

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 213/711 (29%), Positives = 337/711 (47%), Gaps = 145/711 (20%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCG---SKNKCMVHSLEGVPF--TELRYFEWHQFP 55
           MSK++ +I +    F+ M  LR L F G   S++  M     G+ +   +LRY  W  FP
Sbjct: 387 MSKLSRQIHLKSDAFAMMDGLRFLNFYGRPYSQDDKMHLPPPGLKYLPNKLRYLRWDGFP 446

Query: 56  LKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
            K+L +    E+LV L +  SK+ +LW  V+++ +L+ IDL  S  LT+LPDLS+A+NL 
Sbjct: 447 SKSLPLAFRAEHLVELHLRESKLVKLWTGVKDVGNLRTIDLSKSSYLTELPDLSMAKNLV 506

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            L L  C SLTE  SS+QYL+KLE ++L  C +L S P  ++SK L++L +  C +L   
Sbjct: 507 SLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLRSFPM-LYSKVLRKLSIDQCLDLTTC 565

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN---ISSSIFKLQFLE 231
           P + S +++S L L G  I+E+P SI     +  L ++ C ++     +S  I +L +L 
Sbjct: 566 PTI-SQNMKS-LRLWGTSIKEVPQSIT--GKLKVLDLWGCSKMTKFPEVSGDIEEL-WLS 620

Query: 232 SIRIHRCP-NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL----- 285
              I   P ++QFL         TR +     EL++  C + ESLP      +SL     
Sbjct: 621 ETAIQEVPSSIQFL---------TRLR-----ELEMNGCSKLESLPEITVPMESLDLSQD 666

Query: 286 -TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE-GLGQLALLSKLELKNCSEL 343
              L++  C   E LP     +++L  L +  T I+E+P      +  L  L+L + + L
Sbjct: 667 SVILDMSGCSKLESLPQITVPMESLVELNLSKTGIKEIPSISFKHMTSLKILKL-DGTPL 725

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIP-SSVLKLN-KCSKLES 401
           + + SSI  L  ++S+++S CS L+ FP+I            +P  S+ +LN   + L+ 
Sbjct: 726 KELPSSIQFLTRLQSLDMSGCSKLESFPQI-----------TVPMESLAELNLNGTPLKE 774

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSK 460
           LPSS+     L SL++  C KLE  P+    +E+L EL +  TGI+E+P S+  +  L K
Sbjct: 775 LPSSIQFLTRLQSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKELPLSIKDMVCLKK 834

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L      E  P +                    LP  I ++  L+ LT+ GT I+ +P
Sbjct: 835 LTL------EGTPIK-------------------ELPLSIKDMVCLEELTLHGTPIKALP 869

Query: 521 ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           + L    SL +L   D ++L+ +P  +              N+ R+  R D         
Sbjct: 870 DQLP--PSLRYLRTRDCSSLETVPSII--------------NIGRLQLRWD--------- 904

Query: 580 LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                                  FT         NC K+D   L E      M   +   
Sbjct: 905 -----------------------FT---------NCFKVDQKPLIEA-----MHLKIQSG 927

Query: 640 TYITKS---MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
             I +    M  PG+EIP+WF  +  GS+++++   P+  ++L G AFC+V
Sbjct: 928 EEIPRGGIEMVIPGSEIPEWFGDKGVGSSLTIQL--PSNRHQLKGIAFCLV 976


>gi|359493398|ref|XP_003634586.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 241/830 (29%), Positives = 359/830 (43%), Gaps = 135/830 (16%)

Query: 67   LVSLKMPGS--KVTQLWD--DVQNLVS-------LKRIDLKYSKLLTKLPDLSLAQNLEI 115
            +V  + PG   K ++LWD  D+ +  S       LK IDL  SK L K+P  S   NLE 
Sbjct: 498  IVREECPGDPCKWSRLWDVDDIYDAFSRQECLEELKGIDLSNSKQLVKMPKFSSMPNLER 557

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L+L  C+SL E HSSI  L  L  L+L  C+ L S P+S+  + L+ L L  C NLK  P
Sbjct: 558  LNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFP 617

Query: 176  KM-TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
            ++  +      L L   GI+ELPSSI  L+++  L + +C   E        ++FL  + 
Sbjct: 618  EIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFLRELY 677

Query: 235  IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            +  CP  +       N   T +       L L+K    E LPS     +SL  L+I  C 
Sbjct: 678  LEGCPKFE-------NFPDTFTYMGHLRRLHLRKSGIKE-LPSSIGYLESLEILDISCCS 729

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS------- 347
             FE+ P+  GN++ L  L +  TAI+ELP  +G L  L  L L+ C + E  S       
Sbjct: 730  KFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMG 789

Query: 348  ----------------SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
                             SI  L+S+E++ +S CSN + FPEI        G  +    + 
Sbjct: 790  RLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEI-------QGNMKCLKELS 842

Query: 392  KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
              N  + ++ LP+S+   ++L SL +  C  LER P+   N+  L  L ++ T I  +P 
Sbjct: 843  LEN--TAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPY 900

Query: 452  SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            S+  L  L  L L  C + +SLP+ +   KSL  L +  C N     +   ++E L+ L 
Sbjct: 901  SVGHLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLF 960

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
            ++ T I E+P S+  L  L+ L L +  NL  +P S+  L+ L SL + N   L  +P+ 
Sbjct: 961  LRETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDN 1020

Query: 569  LDPLS-SLKYLDLFENNL--DRIPEYLRSFP------------TSIPSEFTSLRLSVDLR 613
            L  L   L  LDL   NL  + IP  L                  IP+  T L     LR
Sbjct: 1021 LRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQL---CKLR 1077

Query: 614  NCLKLDPNELSEIIKD-----GWMKQ----SVNGETYITK-----------------SMY 647
              L ++   + E+I +     GW++     S+  ET  +                  ++ 
Sbjct: 1078 TLL-INHCPMLEVIGELPSSLGWIEAHGCPSLETETSSSLLWSSLLKHLKSPIQQKFNII 1136

Query: 648  FPGNE-IPKWFRHQSTGSTISLKTPQPTGY--NKLMGFAF------------CVVVACSV 692
             PG+  IP+W  HQ  G  +S++ P    Y  N L+GF              CV  +  +
Sbjct: 1137 IPGSSGIPEWVSHQRMGCEVSVELPM-NWYEDNNLLGFVLFFHHVPLDDDDECVRTSGFI 1195

Query: 693  SECCRHESVEDDRKCNLFDVVCDRRSEGYD----SYTSSYL--GKISHVESDHVFLGSSI 746
              C    S  D  K  L D+      + Y     SY S+    G  S       +     
Sbjct: 1196 PHCKLAISHGDQSK-RLDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPALWVTYFPQIG 1254

Query: 747  FAGENSCKRSDEFFFHIDR-------SCCE-----VKKCGIHFVHAQRQR 784
               +   ++ + F  H D        +C E     VK CGIH ++AQ Q+
Sbjct: 1255 IPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYAQDQK 1304



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 170/563 (30%), Positives = 241/563 (42%), Gaps = 112/563 (19%)

Query: 66   NLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC--- 121
            NL  L + G + + +L   + +L SL  ++L   + L   P     ++LE+L L  C   
Sbjct: 554  NLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNCCPNL 613

Query: 122  --------------------SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--KY 159
                                S + E  SSI YL  LEVL+L  C +    P  IH   K+
Sbjct: 614  KKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFP-KIHGNMKF 672

Query: 160  LKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
            L+ L L GC   +N P   +   HLR  L L   GI+ELPSSI  L ++  L I  C + 
Sbjct: 673  LRELYLEGCPKFENFPDTFTYMGHLRR-LHLRKSGIKELPSSIGYLESLEILDISCCSKF 731

Query: 218  ENI-----SSSIFKLQFLESIRIHRCPN-------LQFLEMPSC-----------NIDGT 254
            E       +    K  +L    I   PN       L+ L +  C           N+   
Sbjct: 732  EKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRL 791

Query: 255  RS--------KEQPSS--------ELKLKKCPRPESLPSGQ----CM------------- 281
            R         KE P S         L L  C   E  P  Q    C+             
Sbjct: 792  RELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKEL 851

Query: 282  ------FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                   ++L SL +  C N ER P+   N+  L  L +D TAI  LP  +G L  L  L
Sbjct: 852  PNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHL 911

Query: 336  ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
             L NC  L+ + +SI +LKS+E + ++ CSNL+ F EI     D   +ER+        +
Sbjct: 912  NLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEI---TEDMEQLERL------FLR 962

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLA 454
             + +  LPSS+   + L SLE+I+C+ L  LP+ +GNL  L  L V     +  +P +L 
Sbjct: 963  ETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLR 1022

Query: 455  --QLALSKLKLKKCSSF-ESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEYLKVLT 510
              Q  L+ L L  C+   E +PS L+    L  L I   +N MR +P  I  L  L+ L 
Sbjct: 1023 SLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNI--SENRMRCIPAGITQLCKLRTLL 1080

Query: 511  IKGTAIREVPESLGQL-SSLEWL 532
            I    + EV   +G+L SSL W+
Sbjct: 1081 INHCPMLEV---IGELPSSLGWI 1100


>gi|359486120|ref|XP_003633392.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1218

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 168/574 (29%), Positives = 280/574 (48%), Gaps = 115/574 (20%)

Query: 3    KINSEIQINPYTFSKMTELRLLKFC--------GSKNKCMVHSLEGVPFTELRYFEWHQF 54
            +++S     PY++  M E ++ ++C         + +K  +     +P  ELRY  W  +
Sbjct: 702  RVHSNDYFYPYSYDNMEEEKVDRYCEEMIDSVMKTASKMHLDPDFEIPSYELRYLCWDGY 761

Query: 55   PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
            PL  L +    ENLV L +  S + QLW   ++L SLK IDL +S  L ++P+ S   NL
Sbjct: 762  PLDFLPSNFDGENLVELHLKCSNIKQLWQGKKDLESLKVIDLSHSNKLVQMPEFSSMPNL 821

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLK 172
            E L L  C SL + H S+  L K   L+L  C  L  LP+SI + + L+ L L  CS+  
Sbjct: 822  EELILKGCVSLIDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYLTRCSSFD 881

Query: 173  -------NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
                   N+  +   +LR T       I ELPSSI  L ++  L +  C + E    +  
Sbjct: 882  KFSEIQGNMKSLKFLYLRKT------AIRELPSSID-LESVEILDLSDCSKFEKFPENGA 934

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
             ++ L  +                +++ T  KE                LP+G   ++SL
Sbjct: 935  NMKSLYDL----------------SLENTVIKE----------------LPTGIANWESL 962

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             +L++  C  FE+ P++ GN+++L +L  +GTAI++LP+ +G                  
Sbjct: 963  QTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGD----------------- 1005

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPS 404
                   L+S++ +++S CS  + FPE       G  ++    S+ KLN K + ++ LP 
Sbjct: 1006 -------LESLKILDLSYCSKFEKFPE------KGGNMK----SLWKLNLKNTAIKDLPD 1048

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
            S+   +SL SL++  C K E+ P++ GN+++L+ L +  T I+++P S+  L +L  L L
Sbjct: 1049 SIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDL 1108

Query: 464  KKCSSFESLP---------SRLYVSKS-----------LTSLEIID---CKNFMRLPDEI 500
             KCS FE  P          RLYV  +           L SL+I+D   C  F + P++ 
Sbjct: 1109 SKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKG 1168

Query: 501  GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            GN++ LK L +  TAI+++P+S+G L +  ++++
Sbjct: 1169 GNMKSLKQLYLINTAIKDLPDSIGDLEANIYIII 1202



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 64/382 (16%)

Query: 239  PNLQFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            PNL+ L +  C    +I  +    +  + L L  C + + LPS     ++L  L +  C 
Sbjct: 819  PNLEELILKGCVSLIDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYLTRCS 878

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            +F++  +  GN+++L  L +  TAIRELP                         S   L+
Sbjct: 879  SFDKFSEIQGNMKSLKFLYLRKTAIRELP-------------------------SSIDLE 913

Query: 355  SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            SVE +++S+CS  + FPE      +G+ ++ +    L+    + ++ LP+ +  ++SL +
Sbjct: 914  SVEILDLSDCSKFEKFPE------NGANMKSLYDLSLE---NTVIKELPTGIANWESLQT 964

Query: 415  LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            L++  C K E+ P++ GN+++L++L   GT I+++P S+  L +L  L L  CS FE  P
Sbjct: 965  LDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLESLKILDLSYCSKFEKFP 1024

Query: 474  SRLYVSKSL-----------------------TSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
             +    KSL                        SL++  C  F + P++ GN++ LK L 
Sbjct: 1025 EKGGNMKSLWKLNLKNTAIKDLPDSIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLY 1084

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +  TAI+++P+S+G L SLE L LS  +  +  P+    + SL  L + N  ++ +P+ +
Sbjct: 1085 LNNTAIKDLPDSIGDLESLEILDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSI 1144

Query: 570  DPLSSLKYLDL-FENNLDRIPE 590
              L SLK LDL + +  ++ PE
Sbjct: 1145 GDLESLKILDLSYCSKFEKFPE 1166



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 42/322 (13%)

Query: 309  LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
            L  L  DG  +  LP       L+ +L LK CS ++ +      L+S++ I++S+ + L 
Sbjct: 753  LRYLCWDGYPLDFLPSNFDGENLV-ELHLK-CSNIKQLWQGKKDLESLKVIDLSHSNKLV 810

Query: 369  GFPEIP-FCNIDG-------SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLT 413
              PE     N++        S I+  PS       + L L  C KL+ LPSS+   ++L 
Sbjct: 811  QMPEFSSMPNLEELILKGCVSLIDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALE 870

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES-- 471
             L +  C   ++  +  GN+++L+ L +  T IRE+P S+   ++  L L  CS FE   
Sbjct: 871  CLYLTRCSSFDKFSEIQGNMKSLKFLYLRKTAIRELPSSIDLESVEILDLSDCSKFEKFP 930

Query: 472  ---------------------LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                                 LP+ +   +SL +L++  C  F + P++ GN++ LK L 
Sbjct: 931  ENGANMKSLYDLSLENTVIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLC 990

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
              GTAI+++P+S+G L SL+ L LS  +  +  PE    + SL  L L N  ++ +P+ +
Sbjct: 991  FNGTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSI 1050

Query: 570  DPLSSLKYLDLFE-NNLDRIPE 590
              L SL  LDL + +  ++ PE
Sbjct: 1051 GDLESLVSLDLSKCSKFEKFPE 1072


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/447 (33%), Positives = 233/447 (52%), Gaps = 63/447 (14%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS-----KNKCMVHSLEGVPF--TELRYFEWHQ 53
           +SK  SE+++   TF++M+ LR L    S     K   +  SL+G+    TELR+  W +
Sbjct: 549 ISKARSELRLRSNTFARMSRLRFLNLYRSPHDRDKKDKLQLSLDGLQTLPTELRHLHWSE 608

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           FPLK+L +    ENLV L +P SK+ +LW  +QNLV LK IDL  S+ L ++PDLS A N
Sbjct: 609 FPLKSLPSNFTPENLVVLSLPDSKLKKLWTGIQNLVKLKEIDLSGSEYLYRIPDLSKATN 668

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           +E +DL  C SL E HSSIQYLNKLE LD+  C +L  LP  I S+ LK   +  C  +K
Sbjct: 669 IEKIDLWGCESLEEVHSSIQYLNKLEFLDIGECYNLRRLPGRIDSEVLKVFKVNDCPRIK 728

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCL---SNIGELLIYSCKRLENISSSIFKLQF 229
             P+         L L    I ++ ++I  +   S + +L +Y+C +L ++ SS +KL+ 
Sbjct: 729 RCPQFQGN--LEELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKS 786

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           LES+ +     L                               ES P    + + + +LE
Sbjct: 787 LESLDLDNWSEL-------------------------------ESFPE---ILEPMINLE 812

Query: 290 II---DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            I   +C   +RLP+ + NL++L  L ++G AI+E+P  +  L LL+ L+L +C +LE +
Sbjct: 813 FITLRNCRRLKRLPNSICNLKSLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESL 872

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
             SI KL  ++++E+ +C +L+  PE P   +           +L +N C  LE++  S 
Sbjct: 873 PCSIHKLPQLQTLELYSCKSLRSLPEFPLSLL----------RLLAMN-CESLETISISF 921

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNL 433
               +L  L   +C +L+  P  LG +
Sbjct: 922 NKHCNLRILTFANCLRLD--PKALGTV 946



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 197/422 (46%), Gaps = 87/422 (20%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            ++L   + NL  L  + + G+        L +   + K++L  C  LE + SSI  L  
Sbjct: 633 LKKLWTGIQNLVKLKEIDLSGSEYLYRIPDLSKATNIEKIDLWGCESLEEVHSSIQYLNK 692

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           +E ++I  C NL+  P             RI S VLK+ K +                  
Sbjct: 693 LEFLDIGECYNLRRLPG------------RIDSEVLKVFKVN------------------ 722

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS----KLKLKKCSSFES 471
              DC +++R P   GNLE   EL ++ T I +V  +++ + +S    +L +  C    S
Sbjct: 723 ---DCPRIKRCPQFQGNLE---ELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSS 776

Query: 472 LPSRLYVSKSLTSLEIID------------------------CKNFMRLPDEIGNLEYLK 507
           LPS  Y  KSL SL++ +                        C+   RLP+ I NL+ L 
Sbjct: 777 LPSSFYKLKSLESLDLDNWSELESFPEILEPMINLEFITLRNCRRLKRLPNSICNLKSLA 836

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL-SNNNLERI 565
            L ++G AI+E+P S+  L  L  L L+D  +L+ +P S+++L  L +L+L S  +L  +
Sbjct: 837 YLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLELYSCKSLRSL 896

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           PE   PLS L+ L +   +L+ I     SF     ++  +LR+ +   NCL+LDP  L  
Sbjct: 897 PEF--PLSLLRLLAMNCESLETIS---ISF-----NKHCNLRI-LTFANCLRLDPKALGT 945

Query: 626 IIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFC 685
           + +           ++    + +PG+EIP+WF HQS GS+++L+   P    +    AFC
Sbjct: 946 VAR--------AASSHTDFFLLYPGSEIPRWFSHQSMGSSVTLQF--PVNLKQFKAIAFC 995

Query: 686 VV 687
           VV
Sbjct: 996 VV 997


>gi|104647007|gb|ABF74127.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 190/650 (29%), Positives = 300/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L ++P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISYNTRR--LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    N++ L    I  T+I  +P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTNIEVLR---ISETSIEAIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 PEICQTMSCLRWFDLDRTTIKELPENIGNLVALEVLQASRTAIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
                  ++ +  Y S+ L             L   +   + L+ L++            
Sbjct: 353 L------AIGNSFYTSEGL----------LHSLCPPLSRFDDLRALSLSNMXXXXXXXXX 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QATQIL----IHRNMKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|104647025|gb|ABF74136.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 194/650 (29%), Positives = 301/650 (46%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEE PSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    +     S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTXXXNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYFLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
            [Glycine max]
          Length = 1344

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 232/804 (28%), Positives = 355/804 (44%), Gaps = 168/804 (20%)

Query: 6    SEIQINPYTFSKMTELRLLKF-CGSKNKC---MVHSLEGVPFTELRYFEWHQFPLKTL-N 60
            S++ ++  TFS+M  +R LKF  G    C   +   L+ +P  +L Y +W  +P K+L +
Sbjct: 573  SDLPLSYETFSRMINIRFLKFYMGRGRTCNLLLPSGLKSLP-NKLMYLQWDGYPSKSLPS 631

Query: 61   ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                +NLV L M  S V +LWD +++  SLK I+L+ SK LT LPDLSLA NLE +D+ +
Sbjct: 632  TFCTDNLVVLSMMESHVEKLWDGIKSFASLKEINLRASKKLTNLPDLSLAPNLETIDVSH 691

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----K 176
            C+SL     SIQY+ KL + +L+ CK+L SLP +IH   L+  +LR CS+L         
Sbjct: 692  CTSLLHVPLSIQYVKKLLLFNLESCKNLKSLPINIHLSSLEMFILRRCSSLDEFSVTSQN 751

Query: 177  MTSCHLRSTLPLLGVGIEELPSSI-KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
            MT+  LR T       I++ P  + + L+ +  L + SC  L++++S I  L+ L+ + +
Sbjct: 752  MTNLDLRET------AIKDFPEYLWEHLNKLVYLNLESCSMLKSLTSKI-HLKSLQKLSL 804

Query: 236  HRCPNLQFLEMPS-----CNIDGTRSKEQPSS--------ELKLKKC---------PRPE 273
              C +L+   + S      N+ GT  KE P+S         L L  C         P+ E
Sbjct: 805  RDCSSLEEFSVTSENMGCLNLRGTSIKELPTSLWRNNKLFTLVLHSCKKLVNFPDRPKLE 864

Query: 274  SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
             LP    +F  ++S E    PN     DE   L +L  L + G++I  LP  +  L  L 
Sbjct: 865  DLP---LIFNGVSSSE---SPN----TDEPWTLSSLADLSLKGSSIENLPVSIKDLPSLK 914

Query: 334  KLELKNC--------------------SELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
            KL L  C                    S++E +S SI  L  ++ + ++N   L    ++
Sbjct: 915  KLTLTECKKLRSLPSLPPSLEDLSLDESDIECLSLSIKDLSHLKILTLTNYKKLMSPQDL 974

Query: 374  PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
            P             SS   L   SK++S   S+     L    ++  K+   LP EL   
Sbjct: 975  P------------SSSKASLLNESKVDSHLVSMKGLSHLQKFPLVKWKRFHSLP-ELPPF 1021

Query: 434  EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
              LEEL +  + I  +PKS+  L+ L KL +KKC+    LP                   
Sbjct: 1022 --LEELSLSESNIECIPKSIKNLSHLRKLAIKKCTGLRYLP------------------- 1060

Query: 493  FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSS 551
               LP       YLK L ++G  I  +P S+  L  L  + L +   LQ++PE    L S
Sbjct: 1061 --ELP------PYLKDLFVRGCDIESLPISIKDLVHLRKITLIECKKLQVLPELPPCLQS 1112

Query: 552  LVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVD 611
              +    +  + R  + +          L E   DR   Y                    
Sbjct: 1113 FCAADCRSLEIVRSSKTV----------LIE---DRYAYYY------------------- 1140

Query: 612  LRNCLKLDPNELSEIIKDGWMKQSVNGETYITK-----SMYFPGNEIPKWFRHQSTGSTI 666
              NC+ LD N  + II D   + +       T      S+  PG EIP WF +QST S++
Sbjct: 1141 --NCISLDQNSRNNIIADAPFEAAYTSLQQGTPLGPLISICLPGTEIPDWFSYQSTNSSL 1198

Query: 667  SLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYT 725
             ++ PQ    + K +GFA C+V+   +     +E  + D KC  F      +S      +
Sbjct: 1199 DMEIPQQWFKDSKFLGFALCLVIGGFLQNS--YEGYDPDVKCYHF-----VKSAFNSDPS 1251

Query: 726  SSYLGKISHV-------ESDHVFL 742
              +LG  + V        SDH+F+
Sbjct: 1252 VPFLGHCTTVMQVPQGFNSDHMFI 1275


>gi|224111080|ref|XP_002332990.1| predicted protein [Populus trichocarpa]
 gi|222834667|gb|EEE73130.1| predicted protein [Populus trichocarpa]
          Length = 881

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 215/736 (29%), Positives = 323/736 (43%), Gaps = 145/736 (19%)

Query: 7   EIQINPYTFSKMTELRLLKFC-------GSKNKCM------VHSLEGVPF--TELRYFEW 51
           E+ ++P  F  M  LRLLK          SK K M      +H   G+ F  +ELR+  W
Sbjct: 128 ELTLSPTAFEGMYNLRLLKIYYPPFLKDPSKEKIMNGKRVGIHLPRGLHFLSSELRFLYW 187

Query: 52  HQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
           + + LK+  +I   E LV L+MP S++ QL ++                         + 
Sbjct: 188 YNYALKSFPSIFFPEKLVQLEMPCSQLEQLRNE------------------------GML 223

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS 169
           ++L+ L+L  CS L     SI  L  L+  DL+ C  L SLP +I + K LK L L GCS
Sbjct: 224 KSLKSLNLHGCSGLASLTHSIGMLKSLDQFDLNGCSRLASLPNNIDALKSLKSLHLSGCS 283

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
                                 G+  LP+SI  L ++ +L +  C RL ++   +  L  
Sbjct: 284 ----------------------GLVSLPNSIGVLKSLDQLDLSDCSRLASLPDRLASL-- 319

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L+ I   +   L                      LKL  C    SL       KSLTSL 
Sbjct: 320 LDKIGEFKSMKL----------------------LKLHGCSGLASLLDNIGELKSLTSLN 357

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +  C + E LPD +G L++L +L + G   +  L E +G L  L+KL L  CS L  +  
Sbjct: 358 LSGCSSLESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLAKLHLTGCSGLASVPD 417

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSL- 406
           +I +LKS+  + +S CS L   P+          I+R+    +L L+ C  L SLP S+ 
Sbjct: 418 NIDRLKSLAKLHLSGCSGLASLPD---------SIDRLKCLDMLHLSGCLGLASLPDSID 468

Query: 407 ---CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLK 462
                 KSL  L +  C  L  LPD +G L++L+ L + G +G+  +P ++   AL  LK
Sbjct: 469 DNIGALKSLKWLHLSGCSGLASLPDRIGELKSLKSLNLNGCSGLASLPNNIG--ALKSLK 526

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPE 521
           L   S  ESLP  +   + LT L +  C     LPD IG L+ L  L + G + ++ +PE
Sbjct: 527 LLHLSGLESLPDNIGGLRCLTMLNLSGCFKLASLPDSIGALKLLCTLHLIGCSGLKSLPE 586

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
           S+G+L  L  L LS        E L  L SL  L+LS  + ERIP  +  L+ L  L L 
Sbjct: 587 SIGELKRLTTLDLS--------ERLGSLVSLTQLRLSQIDFERIPASIKQLTKLSKLYLD 638

Query: 582 E-NNLDRIPEYLRSFPTSIPS-----------------EFTSLRLSVDLRNCLKLDPNEL 623
           +   L  +PE   +    I S                 E+ ++    +   CL+LD N  
Sbjct: 639 DCKQLQCLPELPSTLQVLIASGCISLKSVASIFMQGDREYKAVSQEFNFSECLQLDQNSH 698

Query: 624 SEIIKDGWMK----------QSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQP 673
             I+    ++          Q   G       +  PG+E+ + F +++   + S+K  QP
Sbjct: 699 FRIMGAAHLRIRRMATSLFYQEYAGNPLKEVRLCIPGSEVLERFSYKNREGS-SVKIRQP 757

Query: 674 TGYNKLMGFAFCVVVA 689
             +++  GF  C VV+
Sbjct: 758 AHWHR--GFTLCAVVS 771


>gi|224094841|ref|XP_002334784.1| predicted protein [Populus trichocarpa]
 gi|222874625|gb|EEF11756.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 233/484 (48%), Gaps = 50/484 (10%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV-------------------------L 165
           I  L  L  L L  C  L SLP SI +  + RL                          L
Sbjct: 10  IDELKSLVELHLYACSKLASLPNSIGNVEISRLASSLWLLRTSKSTGQHWRVEISRRAYL 69

Query: 166 RGCSNLKNLPKMTSCHLRS--TLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISS 222
            GCS L +LP      L+S   L L G  G+  LP +I  L ++  L +  C  L ++  
Sbjct: 70  YGCSGLASLPDSIGA-LKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPD 128

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
           SI  L+ LES+ +  C  L    +P  +I   +S E     L L  C    SLP      
Sbjct: 129 SIGALKSLESLHLTGCSGLA--SLPD-SIGALKSLES----LHLYGCSGLASLPDSIGAL 181

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCS 341
           KSL SL++  C     LPD +  L++L+ L + G + +  LP+ +G L  L  L L  CS
Sbjct: 182 KSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLHLYGCS 241

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
            L  +  SI  LKS+ES+ +  CS L   P+    NI    ++ +    L L+ CS L S
Sbjct: 242 GLASLPDSIGALKSIESLYLYGCSGLASLPD----NI--GALKSL--EWLHLSGCSGLAS 293

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALS 459
           LP S+   KSL SL +  C  L  LPD +G L++LE L + G +G+  +P S+  L +L 
Sbjct: 294 LPDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLE 353

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIRE 518
            L L  CS   SLP  +   KSL  L +  C     LPD IG L+ LK L + G + +  
Sbjct: 354 SLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLSGCSGLAS 413

Query: 519 VPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLK 576
           +P+S+G L SLEWL L   + L  +P+S+  L SL SL L   + L  +P+ +  L SLK
Sbjct: 414 LPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLYGCSGLASLPDTIGALKSLK 473

Query: 577 YLDL 580
            LDL
Sbjct: 474 SLDL 477



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 208/415 (50%), Gaps = 31/415 (7%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           CS L     SI  L  LE L L  C  L SLP +I + K L+ L L GCS L +LP    
Sbjct: 72  CSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIG 131

Query: 180 CHLRS--TLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
             L+S  +L L G  G+  LP SI  L ++  L +Y C  L ++  SI  L+ L+S+ + 
Sbjct: 132 A-LKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPDSIGALKSLQSLDLK 190

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C  L    +P  NID  +S +     L L  C    SLP      KSL SL +  C   
Sbjct: 191 GCSGLA--SLPD-NIDALKSLDW----LHLYGCSGLASLPDSIGALKSLDSLHLYGCSGL 243

Query: 297 ERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             LPD +G L+++  L + G + +  LP+ +G L  L  L L  CS L  +  SI  LKS
Sbjct: 244 ASLPDSIGALKSIESLYLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIGALKS 303

Query: 356 VESIEISNCSNLKGFPE-------IPFCNIDG-SGIERIPSSV--------LKLNKCSKL 399
           ++S+ +S CS L   P+       + + ++ G SG+  +P S+        L L+ CS L
Sbjct: 304 LKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLESLHLSGCSGL 363

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-A 457
            SLP S+   KSL  L +  C  L  LPD +G L++L+ L + G +G+  +P S+  L +
Sbjct: 364 ASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDSIGALKS 423

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           L  L L  CS   SLP  +   KSL SL +  C     LPD IG L+ LK L +K
Sbjct: 424 LEWLHLYGCSGLASLPDSIGALKSLKSLHLYGCSGLASLPDTIGALKSLKSLDLK 478



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 173/358 (48%), Gaps = 43/358 (12%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ---L 329
            SLP      KSL  L +  C     LP+ +GN++ ++RL      +R   +  GQ   +
Sbjct: 4   ASLPDNIDELKSLVELHLYACSKLASLPNSIGNVE-ISRLASSLWLLRT-SKSTGQHWRV 61

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
            +  +  L  CS L  +  SI  LKS+E + +  CS L   P+    NI    ++ +   
Sbjct: 62  EISRRAYLYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPD----NI--GALKSL--E 113

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIRE 448
            L L+ CS L SLP S+   KSL SL +  C  L  LPD +G L++LE L + G +G+  
Sbjct: 114 WLHLSGCSGLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLAS 173

Query: 449 VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P S+  L +L  L LK CS   SLP  +   KSL  L +  C     LPD IG L+ L 
Sbjct: 174 LPDSIGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLD 233

Query: 508 VLTIKG-------------------------TAIREVPESLGQLSSLEWLVLSD-NNLQI 541
            L + G                         + +  +P+++G L SLEWL LS  + L  
Sbjct: 234 SLHLYGCSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGALKSLEWLHLSGCSGLAS 293

Query: 542 IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPT 597
           +P+S+  L SL SL LS  + L  +P+ +  L SL++L L+  + L  +P+ + +  +
Sbjct: 294 LPDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKS 351



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 140/282 (49%), Gaps = 30/282 (10%)

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN------- 394
           EL  +  +I +LKS+  + +  CS L   P     N++   I R+ SS+  L        
Sbjct: 2   ELASLPDNIDELKSLVELHLYACSKLASLPN-SIGNVE---ISRLASSLWLLRTSKSTGQ 57

Query: 395 -------------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                         CS L SLP S+   KSL  L +  C  L  LPD +G L++LE L +
Sbjct: 58  HWRVEISRRAYLYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHL 117

Query: 442 EG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
            G +G+  +P S+  L +L  L L  CS   SLP  +   KSL SL +  C     LPD 
Sbjct: 118 SGCSGLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPDS 177

Query: 500 IGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL 557
           IG L+ L+ L +KG + +  +P+++  L SL+WL L   + L  +P+S+  L SL SL L
Sbjct: 178 IGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLHL 237

Query: 558 SN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPT 597
              + L  +P+ +  L S++ L L+  + L  +P+ + +  +
Sbjct: 238 YGCSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGALKS 279


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 186/542 (34%), Positives = 267/542 (49%), Gaps = 76/542 (14%)

Query: 7    EIQINPYTFSKMTELRLLKFCGS------------------KN---KCMVHSLEGVPF-- 43
            E+  +   F+KM  LR+L+FC +                  KN   KC +H      F  
Sbjct: 546  ELHFSVDVFTKMNRLRVLRFCNAQICEIWDYAWKRGNYDSCKNQYPKCKLHLYGDFKFLS 605

Query: 44   TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
              L+   W  +P K+L +  H E LV LKM  S++ QLW+  ++   LK I L +S+ L 
Sbjct: 606  NNLKSLHWDGYPSKSLPSTFHPEKLVELKMSFSRLEQLWEGNKSFQKLKFIKLSHSQHLI 665

Query: 103  KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
            K PD S A NL  + L  C+SL + H SI  L KL  LDL+ CK+L S  +SIH + L+ 
Sbjct: 666  KTPDFSGAPNLRRIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIHMESLQI 725

Query: 163  LVLRGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            L L GCS LK  P++         L L G  I+ LP SI+ L+ +  L +  CK LE++ 
Sbjct: 726  LNLAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLP 785

Query: 222  SSIFKLQFLESIRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSSE--------LK 265
            S IFKL+ L+++ +  C  L+ L         +    +D T  +E PSS         L+
Sbjct: 786  SCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQ 845

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            +K C +  SLP      KSL +L I +C   ++LP+   N+++L  L +D T +RELP  
Sbjct: 846  MKNCKKLASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRELPSS 905

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNI 378
            +  L  L  L+LKNC +L  +  SI KL S++++ +S CS LK  P+       +     
Sbjct: 906  IEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLES 965

Query: 379  DGSGIERIPSS--------VLKLNKCSKLESLP-----------------SSLCMFKSLT 413
            +GSGI+ +P+S        VL L  C   ES                   SSL    SL 
Sbjct: 966  NGSGIQEVPTSITLLTNLQVLSLTGCKGGESKSRNLALSLRSSPTEGFRLSSLTALYSLK 1025

Query: 414  SLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFES 471
             L + DC  LE  LP +L +L  LE L +       VP SL++L  L +L L+ C S +S
Sbjct: 1026 ELNLSDCNLLEGALPSDLSSLSWLERLDLSINSFITVP-SLSRLPQLERLILEHCKSLQS 1084

Query: 472  LP 473
            LP
Sbjct: 1085 LP 1086



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 182/614 (29%), Positives = 284/614 (46%), Gaps = 111/614 (18%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C   +S  S   M +SL  L +  C   ++ P+  G +  L  L + GTAI+ LP
Sbjct: 703  LDLEGCKNLKSFSSSIHM-ESLQILNLAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLP 761

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFC 376
              +  L  L+ L L  C  LE + S IFKLKS++++ +SNC  LK  PEI          
Sbjct: 762  LSIEYLNGLALLNLGECKSLESLPSCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKEL 821

Query: 377  NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +D +G+  +PSS+        L++  C KL SLP S+   KSL +L I +C +L++LP+
Sbjct: 822  FLDDTGLRELPSSIEHLNELVLLQMKNCKKLASLPESIFKLKSLKTLTISNCLRLKKLPE 881

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
               N+E+L+EL ++ TG+RE+P S+  L  L  LKLK C    SLP  +    SL +L +
Sbjct: 882  IRENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTL 941

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS--------DNNL 539
              C    +LPD++G+L+ L  L   G+ I+EVP S+  L++L+ L L+          NL
Sbjct: 942  SGCSELKKLPDDMGSLQCLVKLESNGSGIQEVPTSITLLTNLQVLSLTGCKGGESKSRNL 1001

Query: 540  QIIPES-------LNQLSSLVSLK---LSNNNL--ERIPERLDPLSSLKYLDLFENN--- 584
             +   S       L+ L++L SLK   LS+ NL    +P  L  LS L+ LDL  N+   
Sbjct: 1002 ALSLRSSPTEGFRLSSLTALYSLKELNLSDCNLLEGALPSDLSSLSWLERLDLSINSFIT 1061

Query: 585  ---LDRIPEYLR-------------SFPTSI----PSEFTSLR----------------L 608
               L R+P+  R               P+SI     ++ TSL                  
Sbjct: 1062 VPSLSRLPQLERLILEHCKSLQSLPELPSSIIELLANDCTSLENISYLSSGFVLRKFCDF 1121

Query: 609  SVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM-------------------YFP 649
            + +  NC +L  NE S+ ++   +  ++     +TK M                     P
Sbjct: 1122 NFEFCNCFRLMENEQSDTLEA--ILLAIRRFASVTKFMDPMDYSSLRTFASRIPYDAVVP 1179

Query: 650  GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNL 709
            G+ IP+WF  QS G +++++ P      +L+G A C V   ++S+     S         
Sbjct: 1180 GSSIPEWFTDQSVGCSVTVELPPHWYTTRLIGLAVCAVFHPNISKGKFGRSA-------Y 1232

Query: 710  FDVVCDRRSEGY--DSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSC 767
            F +     S G+  D+  S +  K  H+   +  L   +F+   S    +  F    R+ 
Sbjct: 1233 FSM---NESVGFSIDNTASMHFSKAEHIWFGYRSLFGVVFS--RSIDHLEVSFSESIRAG 1287

Query: 768  CEVKKCGIHFVHAQ 781
              VKKCG+  +  Q
Sbjct: 1288 EVVKKCGVRLIFEQ 1301


>gi|224089412|ref|XP_002335049.1| predicted protein [Populus trichocarpa]
 gi|222832778|gb|EEE71255.1| predicted protein [Populus trichocarpa]
          Length = 679

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 203/702 (28%), Positives = 321/702 (45%), Gaps = 157/702 (22%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCG---SKNKCMVHSLEGVPF--TELRYFEWHQFP 55
           MSK++ +I +    F  M  LR L F G   S++  M     G+ +   +LRY  W  FP
Sbjct: 12  MSKLSRQIHLKSDAFEMMDGLRFLNFYGRPYSQDDKMHLPPTGLEYLPNKLRYLRWDGFP 71

Query: 56  LKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
            K+L +    E+LV L +  SK+ +LW  V+++ +L+ IDL  S  LT+LPDLS+A+NL 
Sbjct: 72  SKSLPLAFRAEHLVELHLRESKLVKLWTGVKDVGNLRTIDLSKSSYLTELPDLSMAKNLV 131

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            L L  C SLTE  SS+QYL+KLE ++L  C +L S P  ++SK L++L +  C +L   
Sbjct: 132 SLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLRSFPM-LYSKVLRKLSIYQCLDLTTC 190

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN---ISSSIFKLQFLE 231
           P + S +++S L L G  I+E+P SI     +  L ++ C ++     +S  I +L +L 
Sbjct: 191 PTI-SQNMKS-LRLWGTSIKEVPQSIT--GKLKVLDLWGCSKMTKFPEVSGDIEEL-WLS 245

Query: 232 SIRIHRCP-NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
              I   P ++QFL         TR +E                             LE+
Sbjct: 246 ETAIQEVPSSIQFL---------TRLRE-----------------------------LEM 267

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   E LP+    +++L  L +  T I+ELP  +  L  L  L++  CS+LE +    
Sbjct: 268 NGCSKLESLPEITVPMESLEYLGLSETGIKELPSSIQSLTRLRDLDMSGCSKLESLPEIT 327

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             ++S+  + +S  + +K  P I F ++    I ++  + LK         LPSS+    
Sbjct: 328 VPMESLVELNLSK-TGIKEIPSISFKHMTSLKILKLDGTPLK--------ELPSSIQFLT 378

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
            L SL++  C KLE  P+    +E+L EL +  TGI+E+P S+  +         C    
Sbjct: 379 RLQSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKELPLSIKDMV--------C---- 426

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
                                              LK LT++GT I+E+P S+  +  LE
Sbjct: 427 -----------------------------------LKKLTLEGTPIKELPLSIKDMVCLE 451

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIP 589
            L L    ++ +PE                        L P  SL+YL   + ++L+ + 
Sbjct: 452 ELTLHGTPIKALPE------------------------LPP--SLRYLRTRDCSSLETV- 484

Query: 590 EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS---- 645
                  TSI +    L+L  D  NC K+D   L E      M   +     I +     
Sbjct: 485 -------TSIIN-IGRLQLRWDFTNCFKVDQKPLIEA-----MHLKIQSGEEIPRGGIIE 531

Query: 646 MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
           M  PG+EIP+WF  +  GS+++++   P+  ++L G AFC+V
Sbjct: 532 MVLPGSEIPEWFGDKGVGSSLTIQL--PSNCHQLKGIAFCLV 571


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 203/748 (27%), Positives = 314/748 (41%), Gaps = 181/748 (24%)

Query: 7    EIQINPYTFSKMTELRLLKFC-------GSKNKCMVHSLEGVPF--------TELRYFEW 51
            E++++P  F  M  LRLLK          SK K M+ +  G+          +ELR+  W
Sbjct: 541  ELRLSPTAFEGMYNLRLLKIYYPPFLKDPSKEKIMIRTRIGIHLPRGLHFLSSELRFLYW 600

Query: 52   HQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            + +PLK+L +    E LV L+MP S++ QLW++ Q           + +      D    
Sbjct: 601  YNYPLKSLPSNFFPEKLVQLEMPCSQLEQLWNEGQTY---------HIRAFHHSKD---- 647

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS 169
                      CS L    +SI  L  L  L+L  C  L +LP SI   K L  L L+ CS
Sbjct: 648  ----------CSGLASLPNSIGELKSLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCS 697

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
                                  G+  LP SI  L ++  L +  C  L  +  SI +L+ 
Sbjct: 698  ----------------------GLATLPDSIGELKSLDSLYLGGCSGLATLPESIGELKS 735

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
            L+S+ +  C  L                                SLP      KSL SL 
Sbjct: 736  LDSLYLRGCSGLA-------------------------------SLPDSIGELKSLDSLY 764

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +  C     LPD +G L++L+ L + G + +  LP+ +G+L  L  L L  CS L  + +
Sbjct: 765  LGGCSGLATLPDSIGELKSLDSLYLRGCSGLATLPDSIGELKSLDSLYLGGCSGLASLPN 824

Query: 349  SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLE 400
            SI +LKS++S+ +  CS L   P       D  G+  +P S+        L L+ C  LE
Sbjct: 825  SIGELKSLDSLYLRGCSGLASLP-------DSIGLASLPDSIGELKSLIWLYLSSCLGLE 877

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK 460
            SLP S+C  KSL+ L +  C +L  LP+++G L++L++L +EG                 
Sbjct: 878  SLPDSICELKSLSYLYLQGCSRLATLPNKIGELKSLDKLCLEG----------------- 920

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV-----LTIKG-T 514
                 CS   SLP+ +             C     LP+ I  LE+  +       + G  
Sbjct: 921  -----CSGLASLPNNI-------------CSGLASLPNNIIYLEFRGLDKQCCYMLSGFQ 962

Query: 515  AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
             + E+  S  +L   E+L L ++ +   PESL  L SL  L LS  + ERIP  +  L+S
Sbjct: 963  KVEEIALSTNKLGCHEFLNLENSRVLKTPESLGSLVSLTQLTLSKIDFERIPASIKHLTS 1022

Query: 575  LKYLDLFE-NNLDRIPEYLRSFPTSIPS-----------------EFTSLRLSVDLRNCL 616
            L  L L +   L  +PE   +    I S                 E+ +     +   CL
Sbjct: 1023 LHNLYLDDCKWLQCLPELPLTLQVLIASGCISLKSVASIFMQGDREYKAASQEFNFSECL 1082

Query: 617  KLDPNELSEIIKDGWMKQS----------VNGETYITKSMYFPGNEIPKWFRHQSTGSTI 666
            +LD N  + I+    ++             +G+      +  PG+E+P+WF +++   + 
Sbjct: 1083 QLDQNSRTRIMGAARLRIQRMATSLFSLEYHGKPLKEVRLCIPGSEVPEWFSYKNREGS- 1141

Query: 667  SLKTPQPTGYNKLMGFAFCVVVACSVSE 694
            S+K  QP  +++  GF FC VV+   +E
Sbjct: 1142 SVKIWQPAQWHR--GFTFCAVVSFGQNE 1167


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 236/459 (51%), Gaps = 52/459 (11%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C + +S  S   M +SL  L +  C   ++ P+  GN++ L  L ++GTAI+ LP
Sbjct: 698  LNLEGCKKLKSFSSSIHM-ESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLP 756

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------C 376
              +  L  L+ L LK C  LE +  SIFKLKS++++ +SNC+ LK  PEI          
Sbjct: 757  LSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMEL 816

Query: 377  NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +DGSGI  +PSS+        L L  C KL SLP S C   SL +L +  C +L+ LPD
Sbjct: 817  FLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPD 876

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            +LG+L+ L EL  +G+GI+EVP S+  L  L KL L  C   +S    +  S   +  E 
Sbjct: 877  DLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMVFSFHSSPTEE 936

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPES 545
                  +RLP   G L  L+VL ++   + E  +P  LG + SLE L LS N+   IP S
Sbjct: 937  ------LRLPSFSG-LYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFITIPAS 989

Query: 546  LNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFT 604
            L+ LS L SL L    +L+ +PE    + SL       ++   +  +  S       +F 
Sbjct: 990  LSGLSRLRSLTLEYCKSLQSLPELPSSVESLN-----AHSCTSLETFSCSSGAYTSKKFG 1044

Query: 605  SLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK--------------SMYFPG 650
             LR   +  NC +L  N+ S+I+  G + + +   + I K              +   PG
Sbjct: 1045 DLRF--NFTNCFRLGENQGSDIV--GAILEGIQLMSSIPKFLVPWGIPTPHNEYNALVPG 1100

Query: 651  NEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVV 688
            + IP+WFRHQS G +++++ P P  YN KLMG AFC  +
Sbjct: 1101 SRIPEWFRHQSVGCSVNIELP-PHWYNTKLMGLAFCAAL 1138



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 249/559 (44%), Gaps = 104/559 (18%)

Query: 7    EIQINPYTFSKMTELRLLKFCG------------------------------SKNKCMVH 36
            E+  +   F+KM  LRLLK C                               ++NK  ++
Sbjct: 534  ELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLY 593

Query: 37   SLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDL 95
                     LR   WH +PLK+  +  H E LV L M  S++ QLW+  +    LK I L
Sbjct: 594  EDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKL 653

Query: 96   KYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
             +S+ LTK PD S   NL  L L  C+SL E H SI  L KL  L+L+ CK L S  +SI
Sbjct: 654  SHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI 713

Query: 156  HSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS 213
            H + L+ L L GCS LK  P++     HL   L L G  I+ LP SI+ L+ +  L +  
Sbjct: 714  HMESLQILTLSGCSKLKKFPEVQGNMEHL-PNLSLEGTAIKGLPLSIENLTGLALLNLKE 772

Query: 214  CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSS--- 262
            CK LE++  SIFKL+ L+++ +  C  L+ L     N        +DG+   E PSS   
Sbjct: 773  CKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGC 832

Query: 263  -----ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
                  L LK C +  SLP   C   SL +L +  C   + LPD+LG+LQ L  L  DG+
Sbjct: 833  LNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGS 892

Query: 318  AIRELPEGLGQLALLSKLELKNCSELEYISSS-IFKLKSVESIEISNCSNLKGFPEIPFC 376
             I+E+P  +  L  L KL L  C   +  S + +F   S  + E+               
Sbjct: 893  GIQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMVFSFHSSPTEEL--------------- 937

Query: 377  NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE----RLPDELGN 432
                    R+PS                    F  L SL ++  ++       LP +LG+
Sbjct: 938  --------RLPS--------------------FSGLYSLRVLILQRCNLSEGALPSDLGS 969

Query: 433  LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSL-----TSLE 486
            + +LE L +       +P SL+ L+ L  L L+ C S +SLP      +SL     TSLE
Sbjct: 970  IPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLE 1029

Query: 487  IIDCKNFMRLPDEIGNLEY 505
               C +      + G+L +
Sbjct: 1030 TFSCSSGAYTSKKFGDLRF 1048



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 51/230 (22%)

Query: 387 PSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           P  +++LN C S+L+ L      F+ L S+++   + L + PD  G              
Sbjct: 622 PEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSG-------------- 667

Query: 446 IREVPKSLAQLALSKLKLKKCSS------------------------FESLPSRLYVSKS 481
              VP       L +L LK C+S                         +S  S +++ +S
Sbjct: 668 ---VPN------LRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHM-ES 717

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
           L  L +  C    + P+  GN+E+L  L+++GTAI+ +P S+  L+ L  L L +  +L+
Sbjct: 718 LQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLE 777

Query: 541 IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            +P S+ +L SL +L LSN   L+++PE  + + SL  L L  + +  +P
Sbjct: 778 SLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELP 827


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 243/874 (27%), Positives = 368/874 (42%), Gaps = 192/874 (21%)

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
            E L+ + +  S + +LW   + L  LK IDL  SK L K+P+ S   NLE L+L  C+SL
Sbjct: 566  EQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSL 625

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS--CHL 182
             E HSSI  L +L  L+L  C+ L S PT++  + L+ L L  C  LK +PK+     HL
Sbjct: 626  CELHSSIGDLKQLTYLNLRGCEQLQSFPTNMKFESLEVLCLNQCRKLKKIPKILGNMGHL 685

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
            +  L L G GI+ELP SI  L ++  L + +C + E         +F E     +C    
Sbjct: 686  KK-LCLNGSGIKELPDSIGYLESLEILDLSNCSKFE---------KFPEIRGNMKC---- 731

Query: 243  FLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPE--------------------- 273
               +   ++D T  KE P+S         L L+KC + E                     
Sbjct: 732  ---LKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRESG 788

Query: 274  --SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
               LP      + L  L++  C  FE+ P+  GN++ L RL +D TAI+ELP  +G +  
Sbjct: 789  IKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTS 848

Query: 332  LSKLELKNCSELEYIS-----------------------SSIFKLKSVESIEISNCSNLK 368
            L  L L+ CS+ E  S                        SI  L+S+  +++SNCS  +
Sbjct: 849  LEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFE 908

Query: 369  GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             F EI + N+    +  +  + +K         LP+S+   + L  L++  C  LERLP+
Sbjct: 909  KFSEIQW-NMKFLRVLYLKHTTIK--------ELPNSIGCLQDLEILDLDGCSNLERLPE 959

Query: 429  ---ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
               ++GNL AL    + GT I+ +P S+     L  L L+ C +  SLP  +   KSL  
Sbjct: 960  IQKDMGNLRALS---LAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLPD-ICGLKSLKG 1015

Query: 485  LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
            L II C N     +   ++E LK L ++ T I E+P S+  L  L+ L L +  NL  +P
Sbjct: 1016 LFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNLVALP 1075

Query: 544  ESLNQLSSLVSLKLSN--------NNLE-------------------RIPERLDPLSSLK 576
             S+  L+ L  L++ N        +NL                     IP  L  LSSL+
Sbjct: 1076 ISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEGEIPSDLWCLSSLE 1135

Query: 577  YLDLFENNLDRIPEYLRSF----------------PTSIPSEFTSLRLSVDLRNCLKLDP 620
             L + EN++  IP  +                      +PS  T +    + R C  L+ 
Sbjct: 1136 SLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYM----EARGCPCLET 1191

Query: 621  NELSEIIKDG---WMKQSVNGETYITKSMYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY 676
               S  +      + K ++    +  +    PG+  IP+W  HQ  G  + ++ P    Y
Sbjct: 1192 ETFSSPLWSSLLKYFKSAIQSTFFGPRRFVIPGSSGIPEWVSHQRIGCEVRIELPM-NWY 1250

Query: 677  --NKLMGFA-FCVVVACSVSEC---------CRHESVEDDRKCNLFDVVCDRRSEGYDSY 724
              N  +GF  F   V     EC         C       D+   L ++     S+   SY
Sbjct: 1251 EDNNFLGFVLFFHHVPLDNDECETTEGSTAHCELTISHGDQSERLNNIWFYPESKTCYSY 1310

Query: 725  TSSYLGKISH----VESDHVFLGSSIFAGENS----------------CKRSDEF----- 759
              SY+  IS+    +  D+ F     ++G  S                  RS  +     
Sbjct: 1311 DLSYVFDISNDFDSLNEDNCF--DVHYSGSTSDPAIWVTYFPQIKIRGTYRSSWWNNFKA 1368

Query: 760  FFHI----------DRSCCEVKKCGIHFVHAQRQ 783
             FH           D +C +VK CGIH ++AQ Q
Sbjct: 1369 RFHTPIGSGSFKCGDNACFKVKSCGIHLLYAQDQ 1402


>gi|104646985|gb|ABF74116.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 193/650 (29%), Positives = 298/650 (45%), Gaps = 111/650 (17%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C      P    ++  L       T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLXVXXXPXXSTSIXVLRXXX---TSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++          S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMXXXXXXNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           G L +L  L LS NN + IP S+ +L+ L  L L+N   L+ +P+ L     L Y+    
Sbjct: 397 GNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYI---- 450

Query: 583 NNLDRIPEYLRSFPT--SIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
                   Y+ S  +  SI   F    L  +   NC KLD  + ++I+    + +++  E
Sbjct: 451 --------YIHSCTSLVSISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLE 496

Query: 640 TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           +   +  YFPG++IP  F HQ  G +++++ PQ    + ++GF+ C+++ 
Sbjct: 497 SAKPEHSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 153/436 (35%), Positives = 227/436 (52%), Gaps = 48/436 (11%)

Query: 7   EIQINPYTFSKMTELRLLKF------CGSKNKCMVH-SLEGVPF--TELRYFEWHQFPLK 57
           E+ +   TF++M  LR LKF        SK+K  VH  L G+ +   EL+Y  WH+FP K
Sbjct: 455 EMHLESDTFARMNSLRFLKFYHPFYFMDSKDK--VHLPLSGLKYLSDELKYLHWHRFPAK 512

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L      EN+V L +  S+V QLW  VQ+L++L+ IDL  S  L ++PDLS A+NLE +
Sbjct: 513 SLPQNFCAENIVDLTLHSSRVEQLWTGVQDLLNLRWIDLSRSTYLLEIPDLSRAKNLEYI 572

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           DL +C SL E HSSIQ+L KLE+L L  CK+L  +P  I SK+L+ L L  C  ++  P+
Sbjct: 573 DLSFCESLLEVHSSIQHLEKLEILILSGCKNLGIVPKRIESKFLRILDLSHCKKVRKCPE 632

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK---RLENISSSIFKLQFLESI 233
           ++       L L G  IEELP SI  +  I  L +  C    +   I  +I +L+ L ++
Sbjct: 633 ISG--YLEELMLQGTAIEELPQSISKVKEIRILDLSGCSNITKFPQIPGNIKQLRLLWTV 690

Query: 234 RIHRCP-NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            I   P +++FL                   L++  C +  SLP+  C  K L  LE+  
Sbjct: 691 -IEEVPSSIEFLATLGV--------------LEMNFCEQLSSLPTCICKLKCLERLELSY 735

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           CP  E  P+ L  +++L  L + GTAI+ELP  +  L+ L  L+L  C  L  + S I K
Sbjct: 736 CPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFIEK 795

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKS 411
           L  ++ ++++ C +L   PE+P            PS   L+   C  LE+L  S+    +
Sbjct: 796 LPVLKYLKLNYCKSLLSLPELP------------PSVEFLEAVGCESLETL--SIGKESN 841

Query: 412 LTSLEIIDCKKLERLP 427
              L   +C KL++ P
Sbjct: 842 FWYLNFANCFKLDQKP 857



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 227/502 (45%), Gaps = 80/502 (15%)

Query: 317  TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
            T + E+P+ L +   L  ++L  C  L  + SSI  L+ +E + +S C NL   P+    
Sbjct: 555  TYLLEIPD-LSRAKNLEYIDLSFCESLLEVHSSIQHLEKLEILILSGCKNLGIVPK---- 609

Query: 377  NIDGSGIERIPSSVLKLNKCSK--------------------LESLPSSLCMFKSLTSLE 416
                  IE     +L L+ C K                    +E LP S+   K +  L+
Sbjct: 610  -----RIESKFLRILDLSHCKKVRKCPEISGYLEELMLQGTAIEELPQSISKVKEIRILD 664

Query: 417  IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
            +  C  + + P   GN++   +LR+  T I EVP S+  LA L  L++  C    SLP+ 
Sbjct: 665  LSGCSNITKFPQIPGNIK---QLRLLWTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPTC 721

Query: 476  LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
            +   K L  LE+  C      P+ +  +E LK L + GTAI+E+P S+  LS L  L L+
Sbjct: 722  ICKLKCLERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLN 781

Query: 536  D-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
              +NL  +P  + +L  L  LKL+   +L  +PE L P  S+++L+          E L 
Sbjct: 782  RCDNLVSLPSFIEKLPVLKYLKLNYCKSLLSLPE-LPP--SVEFLEAVGC------ESLE 832

Query: 594  SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEI 653
            +      S F  L  +    NC KLD   L   + D  MK   +G+     ++  PG+EI
Sbjct: 833  TLSIGKESNFWYLNFA----NCFKLDQKPL---LADTQMKIQ-SGKMRREVTIILPGSEI 884

Query: 654  PKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCN-LFDV 712
            P WF  QS GS++++K   PT  ++  GFAF +V                + +CN +F  
Sbjct: 885  PGWFCDQSMGSSVAIKL--PTNCHQHNGFAFGMVFV--------FPDPPTELQCNRIFIC 934

Query: 713  VCDRRSEGYDSYT-----SSYLGKISHVESDHVFL--GSSIFAGENSCKRSD----EFFF 761
             C  R E  + +      S+   ++  VESD + L      F   +   +       F F
Sbjct: 935  ECHARGENDEHHDVIFNLSTCAYELRSVESDQMLLLYNPCEFVKRDCISQYSGKEISFEF 994

Query: 762  HID-----RSCCEVKKCGIHFV 778
            ++D     ++ C+VK+CG++ +
Sbjct: 995  YLDEPSGLQNRCKVKRCGVYLL 1016



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 161/338 (47%), Gaps = 60/338 (17%)

Query: 202 CLSNIGELLIYSCKRLENISSSIFKL------------QFLESIRIHRCPNLQFLEMPSC 249
           C  NI +L ++S  R+E + + +  L              LE   + R  NL+++++  C
Sbjct: 519 CAENIVDLTLHS-SRVEQLWTGVQDLLNLRWIDLSRSTYLLEIPDLSRAKNLEYIDLSFC 577

Query: 250 N----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
                +  +    +    L L  C     +P  +   K L  L++  C    + P+  G 
Sbjct: 578 ESLLEVHSSIQHLEKLEILILSGCKNLGIVPK-RIESKFLRILDLSHCKKVRKCPEISGY 636

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           L+    L++ GTAI ELP+                        SI K+K +  +++S CS
Sbjct: 637 LE---ELMLQGTAIEELPQ------------------------SISKVKEIRILDLSGCS 669

Query: 366 NLKGFPEIPFCNID-----GSGIERIPSS--------VLKLNKCSKLESLPSSLCMFKSL 412
           N+  FP+IP  NI       + IE +PSS        VL++N C +L SLP+ +C  K L
Sbjct: 670 NITKFPQIP-GNIKQLRLLWTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPTCICKLKCL 728

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFES 471
             LE+  C KLE  P+ L  +E+L+ L + GT I+E+P S+  L+ L  L+L +C +  S
Sbjct: 729 ERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVS 788

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           LPS +     L  L++  CK+ + LP+   ++E+L+ +
Sbjct: 789 LPSFIEKLPVLKYLKLNYCKSLLSLPELPPSVEFLEAV 826


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 168/564 (29%), Positives = 271/564 (48%), Gaps = 112/564 (19%)

Query: 41   VPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSK 99
            +P  ELRY  W  +PL +L +    ENLV L +  S + QLW   + L SLK IDL YS 
Sbjct: 666  IPSYELRYLYWDGYPLDSLPSNFDGENLVELHLKCSNIKQLWQGNKYLESLKVIDLSYST 725

Query: 100  LLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
             L ++P+ S   NLE L L  C SL + H SI  L KL  L+L  C  +  LP+SI   +
Sbjct: 726  KLIQMPEFSSLSNLERLILKGCVSLIDIHPSIGGLKKLTTLNLKWCLKIKGLPSSISMLE 785

Query: 159  YLKRLVLRGCSNL-------KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
             L+ L L  CS+         N+  +   +L+ T        ++LP+SI    +  +L  
Sbjct: 786  SLQLLDLSKCSSFCKFSEIQGNMRCLREPYLKET------ATKDLPTSIGNSRSFWDL-- 837

Query: 212  YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
            Y C R  N+   +   Q + S+R+         E+PS +ID                   
Sbjct: 838  YPCGR-SNLEKFLVIQQNMRSLRLLYLCKTAIRELPS-SID------------------- 876

Query: 272  PESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
                         L S+EI+D   C  FE+  +   N+++L +L++  TAI+ELP G+  
Sbjct: 877  -------------LESVEILDLSNCFKFEKFSENGANMKSLRQLVLTNTAIKELPTGIAN 923

Query: 329  LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
                                     +S+ ++++S CS  + FPEI     + + +++   
Sbjct: 924  W------------------------ESLRTLDLSKCSKFEKFPEI---QGNMTSLKK--- 953

Query: 389  SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
              L LN  + ++ LP S+   KSL  L + DC K E  P++ GN+++L+EL ++ T I++
Sbjct: 954  --LLLNNTA-IKGLPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTAIKD 1010

Query: 449  VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            +P S+  L                       +SL  L++ +C  F + P++ GN++ L+V
Sbjct: 1011 LPDSIGDL-----------------------ESLWFLDLTNCSKFEKFPEKGGNMKSLRV 1047

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L +  TAI+++P+S+G L SLE+L LSD +  +  PE    + SL  L L N  ++ +P 
Sbjct: 1048 LYLNDTAIKDLPDSIGDLESLEFLDLSDCSKFEKFPEKGGNMKSLKKLSLKNTAIKDLPY 1107

Query: 568  RLDPLSSLKYLDLFE-NNLDRIPE 590
             +  L SL +LDL + +  ++ PE
Sbjct: 1108 SIRDLESLWFLDLSDCSKFEKFPE 1131


>gi|28555894|emb|CAD45029.1| NBS-LRR disease resistance protein homologue [Hordeum vulgare]
          Length = 1262

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 212/696 (30%), Positives = 327/696 (46%), Gaps = 119/696 (17%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTEL---RYFEWHQFP--LKTLN 60
            S+ +++   FS    LR+L   G   K    +L  +   E+   +  +  QFP  +  L+
Sbjct: 551  SDCKLHGSAFSFQKCLRVLDLSGCSIKDFASALGQLKQLEVLIAQKLQDRQFPESITRLS 610

Query: 61   ILHWENLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDL 118
             LH+ NL      GS+ ++++   V  LVSL  +DL Y   +  +P  L + +NL+ LDL
Sbjct: 611  KLHYLNL-----SGSRGISEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQTLDL 665

Query: 119  GYCS---SLTETHSSIQYLNKL---------------------EVLDLDRCKSLTSLPTS 154
             +C    SL E+  S+Q L +L                     + LDL  C  L SLP S
Sbjct: 666  SWCEKLESLPESLGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDLSSCYKLESLPES 725

Query: 155  IHS-KYLKRLVLRGCSNLKNLPK------------MTSCHLRSTLP----------LLGV 191
            + S K ++ L L  C  L +LPK            ++ C    T P          +L +
Sbjct: 726  LGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTIDLSGCKKLETFPESFGSLENLQILNL 785

Query: 192  G----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP-------- 239
                 +E LP S   L N+  L +  CK+LE++  S+  L+ L+++    C         
Sbjct: 786  SNCFELESLPESFGSLKNLQTLNLVECKKLESLPESLGGLKNLQTLDFSVCHKLESVPES 845

Query: 240  -----NLQFLEMPSCNIDGTRSKEQPS----SELKLKKCPRPESLPSGQCMFKSLTSLEI 290
                 NLQ L++  C+   +  K   S      L L  C + ESLP      ++L  L +
Sbjct: 846  LGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQILNL 905

Query: 291  IDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
             +C   E LP+ LG L+ L  L I   T +  LP+ LG L  L +L+L  C +LE +  S
Sbjct: 906  SNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGCMKLESLPDS 965

Query: 350  IFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
            +  L+++E++ +S C  L+  PE         G++ + +  L L  C KLESLP SL   
Sbjct: 966  LGSLENLETLNLSKCFKLESLPE------SLGGLQNLQT--LDLLVCHKLESLPESLGGL 1017

Query: 410  KSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCS 467
            K+L +L++  C KLE LP+ LG L+ L+ L +     +  +P+SL  L  L  LKL+ C 
Sbjct: 1018 KNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPESLGSLKNLHTLKLQVCY 1077

Query: 468  SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQL 526
              +SLP  L   K+L +L +  C N   +P+ +G+LE L++L +     +  +P+SLG L
Sbjct: 1078 KLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSL 1137

Query: 527  SSLEWLVLSD--------------NNLQII-----------PESLNQLSSLVSLKLSN-N 560
             +L+ L+LS                NLQ +           P+SL  L +L +L LSN  
Sbjct: 1138 KNLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCF 1197

Query: 561  NLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
             LE +PE L  L  L+ L+LF    L+ +PE L S 
Sbjct: 1198 KLESLPEILGSLKKLQTLNLFRCGKLESLPESLGSL 1233



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 253/533 (47%), Gaps = 72/533 (13%)

Query: 76   KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
            K+  L  ++  L +L+ IDL   K L   P+     +NL+IL+L  C  L     S   L
Sbjct: 742  KLVSLPKNLGRLKNLRTIDLSGCKKLETFPESFGSLENLQILNLSNCFELESLPESFGSL 801

Query: 135  NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP------------KMTSC- 180
              L+ L+L  CK L SLP S+   K L+ L    C  L+++P            K++ C 
Sbjct: 802  KNLQTLNLVECKKLESLPESLGGLKNLQTLDFSVCHKLESVPESLGGLNNLQTLKLSVCD 861

Query: 181  HLRSTLPLLGV-------------GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
            +L S L  LG               +E LP S+  L N+  L + +C +LE++  S+ +L
Sbjct: 862  NLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRL 921

Query: 228  QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
            + L+++ I  C  L FL     N+     K  P   L L  C + ESLP      ++L +
Sbjct: 922  KNLQTLNISWCTELVFLPKNLGNL-----KNLP--RLDLSGCMKLESLPDSLGSLENLET 974

Query: 288  LEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L +  C   E LP+ LG LQ L  L ++    +  LPE LG L  L  L+L  C +LE +
Sbjct: 975  LNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPESLGGLKNLQTLQLSFCHKLESL 1034

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
              S+  LK+++++ +S C  L+  PE          ++ + +  LKL  C KL+SLP SL
Sbjct: 1035 PESLGGLKNLQTLTLSVCDKLESLPE------SLGSLKNLHT--LKLQVCYKLKSLPESL 1086

Query: 407  CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLA-LSKLKLK 464
               K+L +L +  C  LE +P+ +G+LE L+ L +     +  +PKSL  L  L  L L 
Sbjct: 1087 GSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSLKNLQTLILS 1146

Query: 465  KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG----------- 513
             C+   SLP  L   K+L +L++  CK    LPD +G+LE L+ L +             
Sbjct: 1147 WCTRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEIL 1206

Query: 514  --------------TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSS 551
                            +  +PESLG L  L+ LVL D   L+ +P+SL  LS 
Sbjct: 1207 GSLKKLQTLNLFRCGKLESLPESLGSLKHLQTLVLIDCPKLEYLPKSLENLSG 1259



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 227/453 (50%), Gaps = 52/453 (11%)

Query: 56   LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLE 114
            L+TL +   +NLVSL             + +L +L+ +DL   K L  LP+ L   +NL+
Sbjct: 852  LQTLKLSVCDNLVSL----------LKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQ 901

Query: 115  ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKN 173
            IL+L  C  L     S+  L  L+ L++  C  L  LP ++ + K L RL L GC  L++
Sbjct: 902  ILNLSNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGCMKLES 961

Query: 174  LPK-MTSCHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            LP  + S     TL L     +E LP S+  L N+  L +  C +LE++  S+  L+ L+
Sbjct: 962  LPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPESLGGLKNLQ 1021

Query: 232  SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
            ++++  C  L+   +P  ++ G ++ +     L L  C + ESLP      K+L +L++ 
Sbjct: 1022 TLQLSFCHKLE--SLPE-SLGGLKNLQT----LTLSVCDKLESLPESLGSLKNLHTLKLQ 1074

Query: 292  DCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   + LP+ LG+++ L+ L +     +  +PE +G L  L  L L NC +LE I  S+
Sbjct: 1075 VCYKLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSL 1134

Query: 351  FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
              LK+++++ +S C+ L   P+      +   ++ + +  L L+ C KLESLP SL   +
Sbjct: 1135 GSLKNLQTLILSWCTRLVSLPK------NLGNLKNLQT--LDLSGCKKLESLPDSLGSLE 1186

Query: 411  SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
            +L +L + +C KLE LP+ LG+L+ L+ L                       L +C   E
Sbjct: 1187 NLQTLNLSNCFKLESLPEILGSLKKLQTLN----------------------LFRCGKLE 1224

Query: 471  SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            SLP  L   K L +L +IDC     LP  + NL
Sbjct: 1225 SLPESLGSLKHLQTLVLIDCPKLEYLPKSLENL 1257



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 28/208 (13%)

Query: 76   KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
            K+  L + + +L +L  + L+    L  LP+ L   +NL  L+L  C +L     S+  L
Sbjct: 1054 KLESLPESLGSLKNLHTLKLQVCYKLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSL 1113

Query: 135  NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------------MTSCH 181
              L++L+L  C  L S+P S+ S K L+ L+L  C+ L +LPK            ++ C 
Sbjct: 1114 ENLQILNLSNCFKLESIPKSLGSLKNLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCK 1173

Query: 182  LRSTLP-LLG-------------VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
               +LP  LG               +E LP  +  L  +  L ++ C +LE++  S+  L
Sbjct: 1174 KLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQTLNLFRCGKLESLPESLGSL 1233

Query: 228  QFLESIRIHRCPNLQFLEMPSCNIDGTR 255
            + L+++ +  CP L++L     N+ G R
Sbjct: 1234 KHLQTLVLIDCPKLEYLPKSLENLSGNR 1261


>gi|15235924|ref|NP_193422.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
 gi|75097884|sp|O23530.3|SNC1_ARATH RecName: Full=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1;
            Short=AtSNC1; AltName: Full=Disease resistance RPP5-like
            protein
 gi|5302803|emb|CAB46044.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268440|emb|CAB80960.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658420|gb|AEE83820.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
          Length = 1301

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 182/591 (30%), Positives = 274/591 (46%), Gaps = 103/591 (17%)

Query: 10   INPYTFSKMTELRLLK--FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWEN 66
            I+  +F  M  L+ L+  + G   + +V+    +P  +LR  +W   PLK+L +    E 
Sbjct: 537  IDKESFKGMRNLQYLEIGYYGDLPQSLVY----LPL-KLRLLDWDDCPLKSLPSTFKAEY 591

Query: 67   LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
            LV+L M  SK+ +LW+    L SLK ++L+YS  L ++PDLSLA NLE LDL  C SL  
Sbjct: 592  LVNLIMKYSKLEKLWEGTLPLGSLKEMNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVT 651

Query: 127  THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-------- 178
              SSIQ   KL  LD+  CK L S PT ++ + L+ L L GC NL+N P +         
Sbjct: 652  LPSSIQNATKLIYLDMSDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDF 711

Query: 179  ----------SCHLRSTLPLLGVGIEELPSSIKCL------SNIGELLIYSCKRLENISS 222
                       C     LP    G++ L    +C+        +  L +   K  E +  
Sbjct: 712  PEGRNEIVVEDCFWNKNLP---AGLDYLDCLTRCMPCEFRPEQLAFLNVRGYKH-EKLWE 767

Query: 223  SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
             I  L  LE + +    NL   E+P        SK      L L  C    +LPS     
Sbjct: 768  GIQSLGSLEGMDLSESENLT--EIPDL------SKATKLESLILNNCKSLVTLPSTIGNL 819

Query: 283  KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG---------------------TAIRE 321
              L  LE+ +C   E LP ++ NL +L  L + G                     TAI E
Sbjct: 820  HRLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEE 878

Query: 322  LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCN 377
            +P  +G L  L +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  
Sbjct: 879  IPSTIGNLHRLVRLEMKKCTGLEVLPTDV-NLSSLETLDLSGCSSLRSFPLISESIKWLY 937

Query: 378  IDGSGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            ++ + IE IP          LKLN C  L +LP+++   + L S E+ +C  LE LP ++
Sbjct: 938  LENTAIEEIPDLSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLPIDV 997

Query: 431  G-------NLEALEELR-------------VEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
                    +L     LR             +E T I E+P ++  L  L KL++K+C+  
Sbjct: 998  NLSSLMILDLSGCSSLRTFPLISTNIVWLYLENTAIEEIPSTIGNLHRLVKLEMKECTGL 1057

Query: 470  ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            E LP+ + +S SL  L++  C +    P     +E    L ++ TAI EVP
Sbjct: 1058 EVLPTDVNLS-SLMILDLSGCSSLRTFPLISTRIE---CLYLQNTAIEEVP 1104



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 167/406 (41%), Gaps = 110/406 (27%)

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA-------------- 110
            E L  L + G K  +LW+ +Q+L SL+ +DL  S+ LT++PDLS A              
Sbjct: 750  EQLAFLNVRGYKHEKLWEGIQSLGSLEGMDLSESENLTEIPDLSKATKLESLILNNCKSL 809

Query: 111  ---------------------------------QNLEILDLGYCSSL------------- 124
                                              +LE LDL  CSSL             
Sbjct: 810  VTLPSTIGNLHRLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLISTNIVWL 869

Query: 125  -------TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
                    E  S+I  L++L  L++ +C  L  LPT ++   L+ L L GCS+L++ P +
Sbjct: 870  YLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLI 929

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            +       L L    IEE+P   K  +N+  L + +CK L  + ++I  LQ L S  +  
Sbjct: 930  SESI--KWLYLENTAIEEIPDLSKA-TNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKE 986

Query: 238  CPNLQ------------FLEMPSCN----------------IDGTRSKEQPSS------- 262
            C  L+             L++  C+                ++ T  +E PS+       
Sbjct: 987  CTGLEVLPIDVNLSSLMILDLSGCSSLRTFPLISTNIVWLYLENTAIEEIPSTIGNLHRL 1046

Query: 263  -ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
             +L++K+C   E LP+      SL  L++  C +    P     ++ L    +  TAI E
Sbjct: 1047 VKLEMKECTGLEVLPT-DVNLSSLMILDLSGCSSLRTFPLISTRIECL---YLQNTAIEE 1102

Query: 322  LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            +P  +     L+ L +  C  L+ IS +IF+L  +E  + ++C  +
Sbjct: 1103 VPCCIEDFTRLTVLMMYCCQRLKTISPNIFRLTRLELADFTDCRGV 1148



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 154/356 (43%), Gaps = 49/356 (13%)

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD-ELG-NLQALNRLIIDGTAIRELP 323
           + K  + E L  G     SL  + +    N + +PD  L  NL+ L+  ++   ++  LP
Sbjct: 596 IMKYSKLEKLWEGTLPLGSLKEMNLRYSNNLKEIPDLSLAINLEELD--LVGCKSLVTLP 653

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +     L  L++ +C +LE   + +  L+S+E + ++ C NL+ FP I     D    
Sbjct: 654 SSIQNATKLIYLDMSDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFP 712

Query: 384 ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
           E     V++   C   ++LP+ L     LT      C   E  P++L  L       V G
Sbjct: 713 EGRNEIVVE--DCFWNKNLPAGLDYLDCLTR-----CMPCEFRPEQLAFL------NVRG 759

Query: 444 TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
               ++ + +  L  L  + L +  +   +P  L  +  L SL + +CK+ + LP  IGN
Sbjct: 760 YKHEKLWEGIQSLGSLEGMDLSESENLTEIPD-LSKATKLESLILNNCKSLVTLPSTIGN 818

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLE---------------------WLVLSDNNLQI 541
           L  L  L +K     EV  +   LSSLE                     WL L +  ++ 
Sbjct: 819 LHRLVRLEMKECTGLEVLPTDVNLSSLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEE 878

Query: 542 IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           IP ++  L  LV L++     LE +P  ++ LSSL+ LDL   +       LRSFP
Sbjct: 879 IPSTIGNLHRLVRLEMKKCTGLEVLPTDVN-LSSLETLDLSGCS------SLRSFP 927


>gi|168043924|ref|XP_001774433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674285|gb|EDQ60796.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 174/522 (33%), Positives = 260/522 (49%), Gaps = 37/522 (7%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           SK+T L  ++ NL  +  ++L     LT LP+ L    +L  LD+  CS+L    + +  
Sbjct: 3   SKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELHN 62

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-------MTSCHLRST 185
           L  L  L+L  C +LTSLP  + +   L  L L GCSNL +LP        +TS ++   
Sbjct: 63  LASLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGC 122

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                  +  LP+ +  L+++  L I  C  L ++ + +  L  L S+ +  C NL  L 
Sbjct: 123 -----SSLTSLPNELGNLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLL 177

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
               N+    S       L L  CP   SLP+      SL SL++  C N   LP+EL N
Sbjct: 178 NELHNLASLTS-------LNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDN 230

Query: 306 LQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
             +L  L I+G +++  LP  LG L  L+ + L  CS L  + + +  L S+ S  IS C
Sbjct: 231 FTSLTSLNINGCSSLTSLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNISEC 290

Query: 365 SNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
             L   P           + ++ S +   L+ CS L SLP+ L    SLTSL + +C  L
Sbjct: 291 WKLISLPN---------ELGKLTSLTSFNLSWCSSLTSLPNELGHLVSLTSLNLSECSNL 341

Query: 424 ERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKS 481
             LP+ELG L +L  L + G + +  +P  L  L +L+ L +   S+  SLP+ L    S
Sbjct: 342 TSLPNELGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNINGSSNLTSLPNELGNLTS 401

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           LTSL I +C     LP+E+GNL+ L  L + + +++  +P  LG L SL  L+LS+ ++L
Sbjct: 402 LTSLHISECMRLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLKSLTSLILSECSSL 461

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
             +P  L  L+SL SL LS   +L  +P  L  L+SL  LDL
Sbjct: 462 TSLPNELGNLTSLTSLNLSGCRHLTSLPNELGNLTSLTSLDL 503



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 166/498 (33%), Positives = 247/498 (49%), Gaps = 40/498 (8%)

Query: 67  LVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           + SL + G S +T L +++ NL SL  +D+     L  LP+ L    +L  L+L  CS+L
Sbjct: 18  ITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELHNLASLTSLNLSGCSNL 77

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
           T   + +  L  L  LDL  C +LTSLP  + +   L  L + GCS+L +LP      L 
Sbjct: 78  TSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGCSSLTSLPN----ELG 133

Query: 184 STLPLLGVGIEE------LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           +   L  + I E      LP+ +  L+++  L +  C  L ++ + +  L  L S+ +  
Sbjct: 134 NLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLLNELHNLASLTSLNLSG 193

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           CP+L  L     N+    S       L L  C    SLP+    F SLTSL I  C +  
Sbjct: 194 CPSLTSLPNELGNLTSLIS-------LDLSGCSNLTSLPNELDNFTSLTSLNINGCSSLT 246

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LP+ELGNL +L  + +   + +  LP  LG LA L+   +  C +L  + + + KL S+
Sbjct: 247 SLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNISECWKLISLPNELGKLTSL 306

Query: 357 ESIEISNCSNLKGFPE-----IPFCNID---GSGIERIPSSV--------LKLNKCSKLE 400
            S  +S CS+L   P      +   +++    S +  +P+ +        L L+ CS L 
Sbjct: 307 TSFNLSWCSSLTSLPNELGHLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCSNLT 366

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-AL 458
           SLP+ L    SLTSL I     L  LP+ELGNL +L  L + E   +  +P  L  L +L
Sbjct: 367 SLPNELGNLTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELGNLKSL 426

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIR 517
           + L L +CSS  SLP+ L   KSLTSL + +C +   LP+E+GNL  L  L + G   + 
Sbjct: 427 TSLILSECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSLTSLNLSGCRHLT 486

Query: 518 EVPESLGQLSSLEWLVLS 535
            +P  LG L+SL  L LS
Sbjct: 487 SLPNELGNLTSLTSLDLS 504



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 170/524 (32%), Positives = 256/524 (48%), Gaps = 40/524 (7%)

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KM 177
            CS LT     +  L  +  L+L  C SLTSLP  + +   L  L + GCSNL +LP ++
Sbjct: 1   MCSKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNEL 60

Query: 178 TSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
            +    ++L L G   +  LP+ +  L+++  L +  C  L ++ + +  L  L S+ I+
Sbjct: 61  HNLASLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNIN 120

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C +L  L     N+    S       L + +C    SLP+      SL SL++  C N 
Sbjct: 121 GCSSLTSLPNELGNLTSLTS-------LNINECSSLTSLPNELGNLTSLISLDLSGCSNL 173

Query: 297 ERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             L +EL NL +L  L + G  ++  LP  LG L  L  L+L  CS L  + + +    S
Sbjct: 174 TSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTS 233

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           + S+ I+ CS+L   P       +   +  + S  + L+ CS L SLP+ L    SLTS 
Sbjct: 234 LTSLNINGCSSLTSLPN------ELGNLTSLTS--INLSWCSNLTSLPNELGNLASLTSF 285

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            I +C KL  LP+ELG L +L    +   + +  +P  L  L +L+ L L +CS+  SLP
Sbjct: 286 NISECWKLISLPNELGKLTSLTSFNLSWCSSLTSLPNELGHLVSLTSLNLSECSNLTSLP 345

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWL 532
           + L    SL  L++  C N   LP+E+GNL  L  L I G++ +  +P  LG L+SL  L
Sbjct: 346 NELGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNINGSSNLTSLPNELGNLTSLTSL 405

Query: 533 VLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIP 589
            +S+   L  +P  L  L SL SL LS  ++L  +P  L  L SL  L L E ++L  +P
Sbjct: 406 HISECMRLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLKSLTSLILSECSSLTSLP 465

Query: 590 EYLRSFP-------------TSIPSEFTSLR--LSVDLRNCLKL 618
             L +               TS+P+E  +L    S+DL  CL L
Sbjct: 466 NELGNLTSLTSLNLSGCRHLTSLPNELGNLTSLTSLDLSWCLNL 509



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 140/402 (34%), Positives = 200/402 (49%), Gaps = 38/402 (9%)

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLG 327
           C +  SLP        +TSL +  C +   LP+ELGNL +L  L I G + +  LP  L 
Sbjct: 2   CSKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELH 61

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIP 387
            LA L+ L L  CS L  + + +  L S+ S+++S CSNL   P           ++ + 
Sbjct: 62  NLASLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTSLPN---------ELDNLT 112

Query: 388 S-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TG 445
           S + L +N CS L SLP+ L    SLTSL I +C  L  LP+ELGNL +L  L + G + 
Sbjct: 113 SLTSLNINGCSSLTSLPNELGNLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSN 172

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +  +   L  LA L+ L L  C S  SLP+ L    SL SL++  C N   LP+E+ N  
Sbjct: 173 LTSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFT 232

Query: 505 YLKVLTIKG-TAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKLSNN-N 561
            L  L I G +++  +P  LG L+SL  + LS  +NL  +P  L  L+SL S  +S    
Sbjct: 233 SLTSLNINGCSSLTSLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNISECWK 292

Query: 562 LERIPERLDPLSSLKYLDL-FENNLDRIPEYLR-------------SFPTSIPSE---FT 604
           L  +P  L  L+SL   +L + ++L  +P  L              S  TS+P+E    T
Sbjct: 293 LISLPNELGKLTSLTSFNLSWCSSLTSLPNELGHLVSLTSLNLSECSNLTSLPNELGKLT 352

Query: 605 SLRLSVDLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITK 644
           SL L +DL  C  L   PNEL  +        ++NG + +T 
Sbjct: 353 SLIL-LDLSGCSNLTSLPNELGNLTS--LTSLNINGSSNLTS 391



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 205/420 (48%), Gaps = 33/420 (7%)

Query: 67  LVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L SL + G S +T L +++ NL SL  +++     LT LP+ L    +L  LDL  CS+L
Sbjct: 114 LTSLNINGCSSLTSLPNELGNLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNL 173

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------- 176
           T   + +  L  L  L+L  C SLTSLP  + +   L  L L GCSNL +LP        
Sbjct: 174 TSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTS 233

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           +TS ++          +  LP+ +  L+++  + +  C  L ++ + +  L  L S  I 
Sbjct: 234 LTSLNINGC-----SSLTSLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNIS 288

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C   + + +P+        K    +   L  C    SLP+      SLTSL + +C N 
Sbjct: 289 EC--WKLISLPN-----ELGKLTSLTSFNLSWCSSLTSLPNELGHLVSLTSLNLSECSNL 341

Query: 297 ERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             LP+ELG L +L  L + G + +  LP  LG L  L+ L +   S L  + + +  L S
Sbjct: 342 TSLPNELGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNINGSSNLTSLPNELGNLTS 401

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           + S+ IS C  L   P       +   ++ + S  L L++CS L SLP+ L   KSLTSL
Sbjct: 402 LTSLHISECMRLTSLPN------ELGNLKSLTS--LILSECSSLTSLPNELGNLKSLTSL 453

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            + +C  L  LP+ELGNL +L  L + G   +  +P  L  L +L+ L L  C + ++LP
Sbjct: 454 ILSECSSLTSLPNELGNLTSLTSLNLSGCRHLTSLPNELGNLTSLTSLDLSWCLNLKTLP 513



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 38/209 (18%)

Query: 52  HQFPLKTLNILHWENLVS-------------LKMPG-SKVTQLWDDVQNLVSLKRIDLKY 97
           H   L +LN+    NL S             L + G S +T L +++ NL SL  +++  
Sbjct: 326 HLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNING 385

Query: 98  SKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH 156
           S  LT LP+ L    +L  L +  C  LT   + +  L  L  L L  C SLTSLP  + 
Sbjct: 386 SSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELGNLKSLTSLILSECSSLTSLPNELG 445

Query: 157 S-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
           + K L  L+L  CS+L +LP                        +  L+++  L +  C+
Sbjct: 446 NLKSLTSLILSECSSLTSLPN----------------------ELGNLTSLTSLNLSGCR 483

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L ++ + +  L  L S+ +  C NL+ L
Sbjct: 484 HLTSLPNELGNLTSLTSLDLSWCLNLKTL 512


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/412 (36%), Positives = 212/412 (51%), Gaps = 58/412 (14%)

Query: 7   EIQINPYTFSKMTELRLLKFCGS---------KNKCMVH-SLEGVPF--TELRYFEWHQF 54
           E+ +    FS+M  LR+LKF             NK  VH    G+ +   ELRY  W  F
Sbjct: 543 EMHLKSDAFSRMDRLRILKFFNHFSLDEIFIMDNKDKVHLPHSGLDYLSDELRYLHWDGF 602

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           PLKTL      EN+V L  P SK+ +LW  VQ+LV L+R+DL  S  L ++PDLS+A+N+
Sbjct: 603 PLKTLPQSFCAENIVELIFPDSKIEKLWTGVQDLVHLRRMDLSGSPYLLEIPDLSMAENI 662

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           E ++L +C SL E + SIQYL KLEVL L  C +L SLP+ I SK L+ L L  C N++ 
Sbjct: 663 ESINLKFCKSLIEVNPSIQYLTKLEVLQLSYCDNLRSLPSRIGSKVLRILDLYHCINVRI 722

Query: 174 LPKMTS------------CHLRSTLP----------LLGVGIEELPSSIKCLSNIGELLI 211
            P ++             C   +  P          L G  IEE+PSSI+ L+ +  L +
Sbjct: 723 CPAISGNSPVLRKVDLQFCANITKFPEISGNIKYLYLQGTAIEEVPSSIEFLTALVRLYM 782

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQ-FLE-------MPSCNIDGTRSKEQPSS- 262
            +CK+L +I SSI KL+ LE + +  C  L+ F E       +    +D T  KE PSS 
Sbjct: 783 TNCKQLSSIPSSICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKELPSSI 842

Query: 263 -------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                  +LKL      E L S     KSLT L+ +     + LP  + +L+ L  L + 
Sbjct: 843 KYLKFLTQLKL-GVTAIEELSSSIAQLKSLTHLD-LGGTAIKELPSSIEHLKCLKHLDLS 900

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           GT I+ELPE       L+ L++ +C  L+ +S   F L++ + +  +NC  L
Sbjct: 901 GTGIKELPELPSS---LTALDVNDCKSLQTLSR--FNLRNFQELNFANCFKL 947



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 234/520 (45%), Gaps = 78/520 (15%)

Query: 297  ERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            E+L   + +L  L R+ + G+  + E+P+ L     +  + LK C  L  ++ SI  L  
Sbjct: 627  EKLWTGVQDLVHLRRMDLSGSPYLLEIPD-LSMAENIESINLKFCKSLIEVNPSIQYLTK 685

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            +E +++S C NL+  P        GS + RI    L L  C  +   P+       L  +
Sbjct: 686  LEVLQLSYCDNLRSLPSRI-----GSKVLRI----LDLYHCINVRICPAISGNSPVLRKV 736

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
            ++  C  + + P+  GN++ L    ++GT I EVP S+  L AL +L +  C    S+PS
Sbjct: 737  DLQFCANITKFPEISGNIKYL---YLQGTAIEEVPSSIEFLTALVRLYMTNCKQLSSIPS 793

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
             +   KSL  L +  C      P+ +  +E L+ L +  TAI+E+P S+  L  L  L L
Sbjct: 794  SICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKELPSSIKYLKFLTQLKL 853

Query: 535  SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
                ++ +  S+ QL SL  L L    ++ +P  ++ L  LK+LDL    +  +PE    
Sbjct: 854  GVTAIEELSSSIAQLKSLTHLDLGGTAIKELPSSIEHLKCLKHLDLSGTGIKELPE---- 909

Query: 595  FPTSIPSEFTSLRLS------------------VDLRNCLKLDPNELSEIIKDGWMKQSV 636
                +PS  T+L ++                  ++  NC KLD  +L   ++       +
Sbjct: 910  ----LPSSLTALDVNDCKSLQTLSRFNLRNFQELNFANCFKLDQKKLMADVQCKIQSGEI 965

Query: 637  NGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS---VS 693
             GE +    +  P +EIP WFR Q+ GS+++ K   P   +++ G AFC+V A     +S
Sbjct: 966  KGEIF---QIVLPKSEIPPWFRGQNMGSSVTKKL--PLNCHQIKGIAFCIVFASPTPLLS 1020

Query: 694  ECCRHESVEDDRKCNLFDVVCDRRSEG----------YDSYTSSYLGKISHVESDHVFLG 743
            +C              F   CD +S+           YD             +SDH+ L 
Sbjct: 1021 DCAN------------FSCKCDAKSDNGEHDHVNLLWYDLDPQPKAAVFKLDDSDHMLLW 1068

Query: 744  -----SSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFV 778
                 + + +  +  + + EF+  I+ S  ++K+CG++F+
Sbjct: 1069 YESTRTGLTSEYSGSEVTFEFYDKIEHS--KIKRCGVYFL 1106


>gi|297805242|ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316341|gb|EFH46764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 225/817 (27%), Positives = 364/817 (44%), Gaps = 125/817 (15%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVP---FTELRYFEWHQFP 55
            +S+I     I+     K++ LR L    S   +   +H+++G+    F +L    W  F 
Sbjct: 453  LSQIEENFNISEKAVKKLSNLRFLNIYSSDLPHPDRLHTMQGLNCQYFRKLISLRWMHFQ 512

Query: 56   LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
              +L +  + E LV L M  SK+ +LW+  + L ++K + L  SK L +LPDLS A NLE
Sbjct: 513  KTSLPSTFNSEFLVELTMHDSKLQKLWEGTKPLRNIKWMVLSNSKNLKELPDLSTATNLE 572

Query: 115  ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKN 173
             L L  CSSL E  SSI  L+ L+ L L  C SL  LP+ + +   L  L LRGCS+L  
Sbjct: 573  TLILENCSSLMELPSSIGKLSNLDYLCLGGCSSLLELPSFTKNVTGLVDLDLRGCSSLV- 631

Query: 174  LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
                                 E+PSSI    N+  L +  C  L  + S +     L ++
Sbjct: 632  ---------------------EIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNV 670

Query: 234  RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS--LTSLEII 291
             +  C NL  +E+PS  +D    +     +L L  C     LP   C+  +  L  L++ 
Sbjct: 671  YLKGCSNL--VELPSSIVDLINLE-----KLDLSGCSSLVELP---CIRNAVNLQMLDLS 720

Query: 292  DCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
            DC +  +LP  +GN   L +L + + + + ELP  +     L +L L+NCS L  + S++
Sbjct: 721  DCSSLVKLPSFVGNATKLEKLNLTNCSNLLELPS-IDNATNLQELLLENCSRLMKLPSTL 779

Query: 351  FKLKSVESIEISNCSNLKGFPEIP------FCNIDG-SGIERIPSSV--------LKLNK 395
                +++ I + NCSN+   P I         ++ G S +  IP S+        L LN+
Sbjct: 780  RNAINLQLINLKNCSNVVKIPAIENVTNLNLLDLSGCSSLVEIPPSIGTVTSLHKLYLNR 839

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            CS L  LPSS+    SL  L + DC  L  LP  +GNL  L+EL +              
Sbjct: 840  CSSLVELPSSIGNITSLQELNLQDCSNLLALPFSIGNLHKLQELHLS-----------FF 888

Query: 456  LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
              + +L L +CS  E LP  + + +SL  L++I C      P+   N+ YL ++   GT 
Sbjct: 889  FFVKQLHLSRCSKLEVLPININL-ESLKVLDLIFCTRLKIFPEISTNIVYLNLV---GTT 944

Query: 516  IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            I EVP S+     L+   +S   NL   P +L+ ++    L LS  +++ +   +  +S 
Sbjct: 945  IEEVPLSIRSWPRLDIFCMSYFENLNEFPHALDIIT---CLHLS-GDIQEVATWVKGISR 1000

Query: 575  LKYLDLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLDPNEL 623
            L  + L+      +L ++P+ L    T        +   F +  + ++  NC KL+    
Sbjct: 1001 LDQILLYGCKRLVSLPQLPDILSDLDTENCASLEKLDCSFHNSEIRLNFANCFKLNKEAR 1060

Query: 624  SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK---TPQPTGYNKLM 680
              II           +T  +K    PG E+   F +++ G ++++K    P PT     +
Sbjct: 1061 DLII-----------QTSTSKYAILPGREVSSSFTYRAAGDSVTVKLNEGPLPTS----L 1105

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
             F  CV++             + D K    +    +  E +  Y  +  G I +   D +
Sbjct: 1106 RFKVCVLII-----------YKGDEKAGDTNT---KHGEFFIFYLQN--GNIGYKYLDPL 1149

Query: 741  FLGSS-IFAGENSCKRSD-EFFFHIDRSCCEVKKCGI 775
              G   IF  E     S+ +F+F I R   ++ +CG+
Sbjct: 1150 VTGHQYIFEVEAEVTSSEFDFYFAIGREEWKIVECGV 1186


>gi|168030408|ref|XP_001767715.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681035|gb|EDQ67466.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 539

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 159/487 (32%), Positives = 255/487 (52%), Gaps = 28/487 (5%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           +  L + + NL SL  +DL   + L  LP+ +    +L  LDL  C SL     S+  LN
Sbjct: 66  LKALPESMGNLNSLVELDLGGCESLEALPESMGNLNSLLKLDLNVCRSLKALPESMSNLN 125

Query: 136 KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVG 192
            L  L+L  C SL +LP S+ +   L  L L GC  LK LP+    +L+S   L L+G G
Sbjct: 126 SLVKLNLYECGSLKTLPESMGNWNSLVELFLYGCGFLKALPESMG-NLKSLVQLNLIGCG 184

Query: 193 -IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +E LP S+  L+++ EL +  C+ L+ +  S+  L  L  + + RC +L+       N+
Sbjct: 185 SLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKAFPESMGNL 244

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
           +          +L L+ C   E+LP       SL  L +I+C + + LP+ +GNL +L +
Sbjct: 245 NSLV-------QLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPESMGNLNSLVQ 297

Query: 312 LIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
           L +    +++ LPE +G L  L KL L  C  L+ +  S+  L S+  +++  C +LK  
Sbjct: 298 LNLSRCGSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNLNSLVELDLGECGSLKAL 357

Query: 371 PEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
           PE          +  + S V L L+KC  L++LP S+    SL  L++  C+ LE LP+ 
Sbjct: 358 PE---------SMGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEALPES 408

Query: 430 LGNLEALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           + NL +L +L + G G ++ +PKS+  L +L  L L  C S ++LP  +    SL  L +
Sbjct: 409 MSNLNSLVKLYLYGCGSLKALPKSMGNLNSLKVLNLIGCGSLKTLPESMGNLNSLVELYL 468

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPES 545
            +C +   LP+ +GNL +LK L + G  ++  +P+S+G L+SL  L L     L+ +PES
Sbjct: 469 GECGSLKVLPESMGNLNFLKKLNLYGCGSLEALPKSMGNLNSLVELDLRGCKTLEALPES 528

Query: 546 LNQLSSL 552
           +  L +L
Sbjct: 529 IGNLKNL 535



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 277/530 (52%), Gaps = 42/530 (7%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           LDLG C SL     S+  LN L  L+L RC SL +LP S+ +   L +L L  C +LK L
Sbjct: 10  LDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVQLNLSRCGSLKAL 69

Query: 175 PK-MTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           P+ M + +    L L G   +E LP S+  L+++ +L +  C+ L+ +  S+  L  L  
Sbjct: 70  PESMGNLNSLVELDLGGCESLEALPESMGNLNSLLKLDLNVCRSLKALPESMSNLNSLVK 129

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + ++ C +L+ L     N +          EL L  C   ++LP      KSL  L +I 
Sbjct: 130 LNLYECGSLKTLPESMGNWNSLV-------ELFLYGCGFLKALPESMGNLKSLVQLNLIG 182

Query: 293 CPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C + E LP+ +GNL +L  L + +  +++ LPE +G L  L +L L  C  L+    S+ 
Sbjct: 183 CGSLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKAFPESMG 242

Query: 352 KLKSVESIEISNCSNLKGFPE--------IPFCNIDGSGIERIPSSV--------LKLNK 395
            L S+  +++  C +L+  PE        +    I+   ++ +P S+        L L++
Sbjct: 243 NLNSLVQLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPESMGNLNSLVQLNLSR 302

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLA 454
           C  L++LP S+    SL  L +I C  L+ L + +GNL +L EL +   G ++ +P+S+ 
Sbjct: 303 CGSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNLNSLVELDLGECGSLKALPESMG 362

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L +L +L L KC S ++LP  +    SL  L++  C++   LP+ + NL  L  L + G
Sbjct: 363 NLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEALPESMSNLNSLVKLYLYG 422

Query: 514 -TAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLD 570
             +++ +P+S+G L+SL+ L ++   +L+ +PES+  L+SLV L L    +L+ +PE + 
Sbjct: 423 CGSLKALPKSMGNLNSLKVLNLIGCGSLKTLPESMGNLNSLVELYLGECGSLKVLPESMG 482

Query: 571 PLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
            L+ LK L+L+   +L+ +P+ + +  + +          +DLR C  L+
Sbjct: 483 NLNFLKKLNLYGCGSLEALPKSMGNLNSLV---------ELDLRGCKTLE 523



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 154/277 (55%), Gaps = 16/277 (5%)

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           +G L  L +L+L  C  L+ +  S+  L S+  + +S C +LK  PE          +  
Sbjct: 1   MGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKALPE---------SMGN 51

Query: 386 IPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           + S V L L++C  L++LP S+    SL  L++  C+ LE LP+ +GNL +L +L +   
Sbjct: 52  LNSLVQLNLSRCGSLKALPESMGNLNSLVELDLGGCESLEALPESMGNLNSLLKLDLNVC 111

Query: 445 -GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
             ++ +P+S++ L +L KL L +C S ++LP  +    SL  L +  C     LP+ +GN
Sbjct: 112 RSLKALPESMSNLNSLVKLNLYECGSLKTLPESMGNWNSLVELFLYGCGFLKALPESMGN 171

Query: 503 LEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN- 559
           L+ L  L + G  ++  +PES+G L+SL  L L +  +L+ +PES+  L+SLV L LS  
Sbjct: 172 LKSLVQLNLIGCGSLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRC 231

Query: 560 NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
            +L+  PE +  L+SL  LDL    +L+ +PE + + 
Sbjct: 232 GSLKAFPESMGNLNSLVQLDLEGCESLEALPESMGNL 268


>gi|104647001|gb|ABF74124.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 188/647 (29%), Positives = 290/647 (44%), Gaps = 105/647 (16%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L M  S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPRVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S C                                S LES P
Sbjct: 267 ASLPVSISELRSLEKLKLSGC--------------------------------SVLESFP 294

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +C   S      +D   ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L++
Sbjct: 295 LEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPWSIAR--LTRLQV 352

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
               +    P  L     L SL    C    R  D       L+ L++    + E+P S+
Sbjct: 353 LAIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPNSI 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           G L  L  L LS      IP S+ +L+ L  L L+N       +RL          L   
Sbjct: 397 GNLWXLLXLDLSGXXXXXIPASIKRLTRLNRLNLNNC------QRLQAXPXXXPXGLLXI 450

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            +      +     SI   F    L  +   NC  L   +  +I+    + +++  E+  
Sbjct: 451 XIHSCTSLV-----SISGCFNQYCLRKLVASNCXXLX--QXXQIL----IHRNLKLESAK 499

Query: 643 TKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
            +  YFPG++IP  F H   G +++++ PQ    + ++GF+ C+++ 
Sbjct: 500 PEHSYFPGSDIPTCFNHXXMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 212/695 (30%), Positives = 327/695 (47%), Gaps = 106/695 (15%)

Query: 4    INSEIQINPYTFSKMTELRLLKFC-------GSKNKCM------VHSLEGVPF--TELRY 48
            I  E+ ++P  F  M  LRLLK          SK + M      +H   G+ F  +ELR+
Sbjct: 444  ITEEMILSPTAFEGMYNLRLLKIYYPPFLKDPSKEQIMNGKRVGIHLPGGLHFLSSELRF 503

Query: 49   FEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
              W+ +PLK++ +    +    L+MP S++ Q W++ Q L  LK ++   SK      DL
Sbjct: 504  LYWYNYPLKSMPSNFFPKKPFQLEMPCSQLEQFWNEYQPLEILKLMNPPSSKPSLIDSDL 563

Query: 108  SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLR 166
                +LE+L  G         SSI+Y  +L  L+L R +S  +LP+SI     L RL L 
Sbjct: 564  FKVPHLEVLHPG-------IPSSIKYSTRLTTLELPRLESFYTLPSSIGCLSQLVRLNLS 616

Query: 167  GCSNLKNLPK------------MTSCHLRSTLP--------LLGVGIEELPSSIKCLSNI 206
             C +L +LP             + SC   ++LP        L  + +  LP SI  L ++
Sbjct: 617  SCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKLKCLTKLNLASLPDSIGELRSL 676

Query: 207  GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS----- 261
             EL + SC +L ++ +SI +L+ L+ + ++ C  L    +P  NI   +S +        
Sbjct: 677  EELDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLA--SLPD-NIGELKSLQWFDLNGCF 733

Query: 262  --SELKLKKCPRPESLPSGQCMFKSLTSL--------EIID------------CPNFERL 299
              +   L  C    SLPS     KSL SL        + ID            C     L
Sbjct: 734  GLASFDLNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSL 793

Query: 300  PDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            PD +G L++L  L   G + +  LP+ +G L  L  L L  CS L  +   I +LKS+E 
Sbjct: 794  PDSIGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEK 853

Query: 359  IEISNCSNLKGFPE-------IPFCNIDG-SGIERIPSSV--------LKLNKCSKLESL 402
            +E++ C  L   P+       + +  +DG SG+  +P  +        L LN CS+L SL
Sbjct: 854  LELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASL 913

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSK 460
              ++   KSL  L +  C  L  LPD +G L++LE L + G +G+  +P ++  L  L K
Sbjct: 914  TDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKK 973

Query: 461  LKLKKCSS---FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
            L    CS      SLP  +   KSL  L++  C     LPD IG L+ LK L + G + +
Sbjct: 974  LDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSEL 1033

Query: 517  REVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSS 574
              + +++G+L SL+ L L+  + L  +P+ + +L SL  L+L+  + L  +P+ +D L  
Sbjct: 1034 ASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKC 1093

Query: 575  LKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
            LK LD F  +       L S P +I  E  SL+ S
Sbjct: 1094 LKKLDFFGCS------GLASLPNNI-GELESLQFS 1121


>gi|147859739|emb|CAN78885.1| hypothetical protein VITISV_037610 [Vitis vinifera]
          Length = 785

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 176/535 (32%), Positives = 258/535 (48%), Gaps = 68/535 (12%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGS-----KNKCMVHSLEGVPFTE-LRYFEWHQFPLKTL 59
           EIQ     F+KM +LRLLK +C       + +C V   +   F   LRY  W    L++L
Sbjct: 51  EIQFTTKVFAKMKKLRLLKAYCNDHGGLIREECKVLFPKDFEFPHNLRYLHWQGCTLRSL 110

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            +  + ENL+ + +  S + QLW   +    LK IDL  S  L K+P      NLE  +L
Sbjct: 111 PSKFYGENLIEINLKSSNIKQLWKGNKCXGKLKAIDLSNSIWLVKMP------NLERPNL 164

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
             C+   E HSSI  L +L  L+L  C+ L S P S+  + LK L L GC NL+N P++ 
Sbjct: 165 EGCTRWCEFHSSIGDLKRLTYLNLGGCEHLQSFPISMKFESLKVLYLNGCQNLENFPEIH 224

Query: 179 SC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
               HL+  L L    I+ELPSSI  L ++  L +  C   E                  
Sbjct: 225 GSMKHLKEQLRLDESRIKELPSSIGYLESLKILNLSYCSNFE------------------ 266

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
                +FLE     I G+    +   EL LK+    E LP+     ++L  L    C NF
Sbjct: 267 -----KFLE-----IQGSMKHLR---ELSLKETAIKE-LPNNIGRLEALEILSFSGCSNF 312

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           E+ P+   N++++  L +D TAI+ LP  +  L  L  LE++NC  L  + ++I  LKS+
Sbjct: 313 EKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSL 372

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             I ++ CS L+ F EI     D   +ER+   +L+    + +  LP S+   + L SLE
Sbjct: 373 RGISLNGCSKLEAFLEI---REDMEQLERL--FLLE----TAITELPPSIEHLRGLKSLE 423

Query: 417 IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL--ALSKLKLKKCSSFES-L 472
           +I+C+KL  LPD +GNL  L  L V   + +  +P +L  L   L  L L  C+  E  +
Sbjct: 424 LINCEKLVSLPDSIGNLTCLRSLFVRNCSKLHNLPDNLRSLKCCLRVLDLGGCNLMEGEI 483

Query: 473 PSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEYLKVLTIKG----TAIREVPES 522
           P  L+   SL  L+I D  N++R +P  I  L  L+ L +        I E+P S
Sbjct: 484 PHDLWCLSSLEYLDISD--NYIRCIPVGISQLSKLRTLLMNHCPMLEEITELPSS 536



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 160/341 (46%), Gaps = 63/341 (18%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL----- 353
            P +      L  L   G  +R LP         SK   +N  E+   SS+I +L     
Sbjct: 87  FPKDFEFPHNLRYLHWQGCTLRSLP---------SKFYGENLIEINLKSSNIKQLWKGNK 137

Query: 354 --KSVESIEISNCSNLKGFPEIPFCNIDG-----------SGIERIPSSVLKLNKCSKLE 400
               +++I++SN   L   P +   N++G             ++R+  + L L  C  L+
Sbjct: 138 CXGKLKAIDLSNSIWLVKMPNLERPNLEGCTRWCEFHSSIGDLKRL--TYLNLGGCEHLQ 195

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL-EELRVEGTGIREVPKSLAQLALS 459
           S P S+  F+SL  L +  C+ LE  P+  G+++ L E+LR++ + I+E+P S+  L   
Sbjct: 196 SFPISM-KFESLKVLYLNGCQNLENFPEIHGSMKHLKEQLRLDESRIKELPSSIGYL--- 251

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
                               +SL  L +  C NF +  +  G++++L+ L++K TAI+E+
Sbjct: 252 --------------------ESLKILNLSYCSNFEKFLEIQGSMKHLRELSLKETAIKEL 291

Query: 520 PESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           P ++G+L +LE L  S  +N +  PE    + S+ SL L    ++ +P  +  L+ L +L
Sbjct: 292 PNNIGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHL 351

Query: 579 DLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
           ++ EN  +     LR  P +I     SLR  + L  C KL+
Sbjct: 352 EM-ENCKN-----LRCLPNNICG-LKSLR-GISLNGCSKLE 384


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 230/452 (50%), Gaps = 36/452 (7%)

Query: 7    EIQINPYTFSKMTELRLLKF-CGSKNKCM-----VHSLEGVPF--TELRYFEWHQFPLKT 58
            EIQ N   +++M +LRLL+  C    + M     VH  E   F   EL Y  W ++PLK+
Sbjct: 577  EIQFNSQVWAEMMKLRLLQIICNDDEEFMKMESKVHFPEDFEFPSYELSYLLWERYPLKS 636

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L +  + ENL+ + +  S + QLW   + L  LK ++L+ S  L  + + S   NLE L+
Sbjct: 637  LPSNFYGENLIEINLKKSNIRQLWQGNKCLGKLKVLNLQGSTQLDHISNFSTMPNLERLN 696

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK 176
            L  C SL +  SSI  L KL  LDL  CK L SLP+SI +   L+ L LR CS+L+   +
Sbjct: 697  LRLCGSLDKIDSSIGVLTKLTWLDLSNCKLLKSLPSSIQYLDSLEELYLRNCSSLEKFLE 756

Query: 177  MTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
            M    ++    L L    IEEL SSI  ++++  L +  CK L+++ S+I  L+ L ++ 
Sbjct: 757  MERGCMKGLRELWLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLD 816

Query: 235  IHRCPNLQFL--------EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPSG 278
            +  C NL+           + S N+ GT  K+  +    L +        C    SLPS 
Sbjct: 817  LRDCSNLETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSN 876

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
             C  +SLT+L++  C N E  P+ + ++Q L  L + GTAI+ELP  + ++  L  L+L 
Sbjct: 877  ICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLS 936

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSVLKLNKCS 397
            NC  LE +  +I+ L+ +  +    C  LK FP     N+ G   +E      L L+ C 
Sbjct: 937  NCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPR-NMGNLKGLRSLEN-----LDLSYCD 990

Query: 398  KLE-SLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +E ++ S +  F  L  L I  CK L+ +P+
Sbjct: 991  GMEGAIFSDIGQFYKLRELNISHCKLLQEIPE 1022



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 229/475 (48%), Gaps = 61/475 (12%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLT-----SLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
            E+ LKK    +     +C+ K        S ++    NF  +P    NL+ LN  +    
Sbjct: 648  EINLKKSNIRQLWQGNKCLGKLKVLNLQGSTQLDHISNFSTMP----NLERLNLRLC--G 701

Query: 318  AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-- 375
            ++ ++   +G L  L+ L+L NC  L+ + SSI  L S+E + + NCS+L+ F E+    
Sbjct: 702  SLDKIDSSIGVLTKLTWLDLSNCKLLKSLPSSIQYLDSLEELYLRNCSSLEKFLEMERGC 761

Query: 376  ------CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
                    +D + IE + SS+        L L  C  L+SLPS++C  +SLT+L++ DC 
Sbjct: 762  MKGLRELWLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCS 821

Query: 422  KLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
             LE  P+ + +++ LE L + GTGI+++      L  L    L  C +  SLPS +   +
Sbjct: 822  NLETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLE 881

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
            SLT+L++  C N    P+ + +++ LK L ++GTAI+E+P S+ ++  L +L LS+  NL
Sbjct: 882  SLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNL 941

Query: 540  QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLK--------YLDLFENNL-DRIP 589
            + +P ++  L  LV L       L++ P  +  L  L+        Y D  E  +   I 
Sbjct: 942  ETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDGMEGAIFSDIG 1001

Query: 590  EY--LRSFPTS-------IPSEFTSLRLSVDLRNCLKLDP---------NELSEIIKDGW 631
            ++  LR    S       IP EF S    +D  +C  L+          +   +++K   
Sbjct: 1002 QFYKLRELNISHCKLLQEIP-EFPSTLREIDAHDCTALETLFSPSSPLWSSFLKLLKSAT 1060

Query: 632  MKQSVNGETYITKSMYFPGNE-IPKWFRHQSTGSTISLKTPQP-TGYNKLMGFAF 684
                 + +T I+K +  PG+  IP+W  +Q  G+ I ++ P      N   GFAF
Sbjct: 1061 QDSECDTQTGISK-INIPGSSGIPRWVSYQKMGNHIRIRLPMNLYEDNNFFGFAF 1114


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 150/449 (33%), Positives = 227/449 (50%), Gaps = 51/449 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILH 63
           EI+     F+KMT+LR+L+   ++ +C VH  +   F   ELRY  W  +PLK L +   
Sbjct: 545 EIRFTTAAFAKMTKLRVLQIDAAQMQCEVHISDDFKFHYDELRYLFWDYYPLKLLPSDFK 604

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            +NLV L+MP S +TQLW+  +   SLK +DL  SK LT+ PD S   NLE L L  C+ 
Sbjct: 605 SKNLVCLRMPNSHLTQLWEGNKVFESLKYMDLSDSKYLTETPDFSRVTNLECLILDGCTQ 664

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL- 182
           L + H S+  L+KL +L L+ C +L   P       LK L+L GC  L+  P +   H+ 
Sbjct: 665 LCKIHLSLGTLDKLTLLSLENCINLKHFPGICQLVSLKTLILSGCPKLEKFPDIAQ-HMP 723

Query: 183 -RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
             S L L G  I ELPSSI   + +  L + +C++L ++ SSI +L  L+++ +  C +L
Sbjct: 724 CLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKLWSLPSSICQLTLLKTLSLSGCSDL 783

Query: 242 QFLEMPSCNIDG---TRSKEQPSSELKLKKCPRPESLPS-----------------GQCM 281
              E+ S N+D    T  K      L+L+ C    +LP+                     
Sbjct: 784 GKCEVNSGNLDALPRTLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESLEDAGA 843

Query: 282 FKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           F  L S++ +    CP  E+ PD   ++  L++L +DGTAI ELP  +     L  L+LK
Sbjct: 844 FSQLVSVKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSISYATELVLLDLK 903

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK 398
           NC +L  + SSI +L  +E++ +S CS+L        C ++                   
Sbjct: 904 NCRKLWSLPSSICQLTLLETLSLSGCSDLGK------CEVNSGN---------------- 941

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           L++LP +L   ++L  LE+ +CK L  LP
Sbjct: 942 LDALPRTLDQLRNLWRLELQNCKSLRALP 970



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 256/579 (44%), Gaps = 94/579 (16%)

Query: 275  LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
            L  G  +F+SL  +++ D       PD    +  L  LI+DG T + ++   LG L  L+
Sbjct: 621  LWEGNKVFESLKYMDLSDSKYLTETPD-FSRVTNLECLILDGCTQLCKIHLSLGTLDKLT 679

Query: 334  KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERI 386
             L L+NC  L++    I +L S++++ +S C  L+ FP+I           +DG+ I  +
Sbjct: 680  LLSLENCINLKHFPG-ICQLVSLKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITEL 738

Query: 387  PSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
            PSS+        L L  C KL SLPSS+C    L +L +  C  L +     GNL+AL  
Sbjct: 739  PSSIAYATELVLLDLKNCRKLWSLPSSICQLTLLKTLSLSGCSDLGKCEVNSGNLDAL-- 796

Query: 439  LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS-----RLYVSKSLTSLE------ 486
                       P++L +L  L +L+L+ C S  +LP+      +  +++  SLE      
Sbjct: 797  -----------PRTLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESLEDAGAFS 845

Query: 487  ---------IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD- 536
                     +  C    + PD   ++  L  L + GTAI E+P S+   + L  L L + 
Sbjct: 846  QLVSVKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSISYATELVLLDLKNC 905

Query: 537  NNLQIIPESLNQL-----------SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NN 584
              L  +P S+ QL           S L   ++++ NL+ +P  LD L +L  L+L    +
Sbjct: 906  RKLWSLPSSICQLTLLETLSLSGCSDLGKCEVNSGNLDALPRTLDQLRNLWRLELQNCKS 965

Query: 585  LDRIP------EYLRSF------PTSIPSEFTSLRLSVDLRNCLKL---------DPNEL 623
            L  +P      E++ +         S  S F+ LR S+   NC KL         D   +
Sbjct: 966  LRALPVLPSSLEFINASNCESLEDISPQSVFSQLRRSM-FGNCFKLTKFQSRMERDLQSM 1024

Query: 624  SEIIKDGWMKQSVNGETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM 680
            +  +     + +   ++ +   ++   FPG+ IP WF H+S G  I+++  Q    +  +
Sbjct: 1025 AAHVDQKKWRSTFEEQSPVVHVLFSTVFPGSGIPDWFAHRSEGHEINIQVSQNWYSSYFL 1084

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH--VESD 738
            GFAF  VVA              D +C  F+           S+   +  ++ H  + SD
Sbjct: 1085 GFAFSAVVAPEKEPLTSGWITYCDLRCGAFNSELKSNGIFSFSFVDDWTEQLEHITIASD 1144

Query: 739  HVFLGS-SIFAGENSCKRS-DEFFFHIDRSCCEVKKCGI 775
            H++L     F G +  K S  +F F  D+  C VK+CG+
Sbjct: 1145 HMWLAYVPSFLGFSPEKWSCIKFSFRTDKESCIVKRCGV 1183


>gi|104646943|gb|ABF74095.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 188/649 (28%), Positives = 293/649 (45%), Gaps = 109/649 (16%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LRY  W  +PLKT+ +    E LV L    S + +LWD +Q L +LK++DL   K L +
Sbjct: 3   KLRYLRWDGYPLKTMPSRFCPEFLVELCTSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVE 62

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLS A NLE L+L YC SL E   SI+ L  L    L  C  L  +P  I  K L+ +
Sbjct: 63  VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGITLKSLETV 122

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS+LK+ P+++    R  L L    IEELPSSI  LS + +L +  C+RL  + S 
Sbjct: 123 GMSGCSSLKHFPEISWNTRR--LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSY 180

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  L+S+                N+DG               C R E+LP       
Sbjct: 181 LGHLVSLKSL----------------NLDG---------------CRRLENLPDTLQNLT 209

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +LE+  C N    P    +++ L    I  T+I E+P  +  L+ L  L++     L
Sbjct: 210 SLETLEVSGCLNVNEFPPVSTSIEVLR---ISETSIEEIPARICNLSQLRSLDISENKRL 266

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SI +L+S+E +++S CS L+ FP                                
Sbjct: 267 ASLPVSISELRSLEKLKLSGCSVLESFP-------------------------------- 294

Query: 404 SSLCMFKSLTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
             L    ++  L   D  +  ++ LP+ +GNL ALE L+   T IR  P S+A+  L++L
Sbjct: 295 --LEXXXTMXXLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRXXPWSIAR--LTRL 350

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           ++    +    P  L     L SL    C    R  D       L+ L++    + E+P 
Sbjct: 351 QVLXIGNSFFTPEGL-----LHSL----CPPLSRFDD-------LRALSLSNMNMTEIPN 394

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
           S+G L  L  L LS      IP S+ +L+ L  L L+N       +RL  L       L 
Sbjct: 395 SIGNLWXLLXLDLSGXXXXXIPASIKRLTRLNRLNLNNC------QRLQALPXXXPXGLL 448

Query: 582 ENNLDRIPEYLRSFPTSIPSEFTSLRL-SVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
              +      +     SI   F    L  +   NC KLD  + ++I+    + +++  E+
Sbjct: 449 XIXIHSCTSLV-----SISGCFNQYCLRKLVASNCYKLD--QAAQIL----IHRNLKLES 497

Query: 641 YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
              +  YFPG++IP  F     G +++++ PQ    + ++GF+ C+++ 
Sbjct: 498 AKPEHSYFPGSDIPTXFNXXVMGPSLNIQLPQSESSSDILGFSACIMIG 546


>gi|224113213|ref|XP_002332638.1| predicted protein [Populus trichocarpa]
 gi|222832865|gb|EEE71342.1| predicted protein [Populus trichocarpa]
          Length = 687

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 207/742 (27%), Positives = 321/742 (43%), Gaps = 146/742 (19%)

Query: 35  VHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
           +H   G+ F  +ELR+  W+ +PLK+  +I   E LV L+MP  ++ QLW++ Q L  LK
Sbjct: 8   IHLPGGLHFLSSELRFLYWYNYPLKSFPSIFFPEKLVQLEMPCCQLEQLWNEGQPLEKLK 67

Query: 92  RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
                               +L+ L+L  CS L     SI  L  L+ LDL  C SLTSL
Sbjct: 68  --------------------SLKSLNLHGCSGLASLPHSIGMLKSLDQLDLSGCSSLTSL 107

Query: 152 PTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELL 210
           P +I + K LK L L GCS L +LP               +G+      +KCL    +L 
Sbjct: 108 PNNIDALKSLKSLNLSGCSRLASLPN-------------SIGV------LKCLD---QLD 145

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP 270
           +  C RL ++  SI  L+ L+S+ +  C  L  L               P+S  +L    
Sbjct: 146 LSGCSRLASLPDSIGALKCLKSLNLSGCSRLASL---------------PNSIGRLA--- 187

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQL 329
              SLP      K L  L +  C     LPD +G L++L  L + G + +  LP+ +G+L
Sbjct: 188 ---SLPDSIGELKCLKLLNLHGCSGLASLPDNIGELKSLKSLDLSGCSRLASLPDSIGEL 244

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L +CS L  +   I +LK ++++ +S CS L   P+    NID   I    S 
Sbjct: 245 KCLITLNLTDCSGLTSLPDRIGELKCLDTLNLSGCSGLASLPD----NIDRVEI----SY 296

Query: 390 VLKLNKCSKLESLPSSL----CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT- 444
            L L+ CS+L SLP S+       K L +L +  C +LE LPD +  L  L  L + G  
Sbjct: 297 WLDLSGCSRLASLPDSIGGQHWQLKCLYALNLTGCLRLESLPDSIDELRCLTTLDLSGCL 356

Query: 445 GIREVPKSLAQLALSKLKLKKC---SSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDE 499
            +  +P ++  L    L  ++C   S F+ +      +  L   E ++  N   ++ P+ 
Sbjct: 357 KLASLPNNIIDLEFKGLDKQRCYMLSGFQKVEEIASSTYKLGCHEFLNLGNSRVLKTPER 416

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
           +G+L +L  L +       +P S+  L+ L  L L D   LQ +PE  + L  L++    
Sbjct: 417 LGSLVWLTELRLSEIDFERIPASIKHLTKLSKLYLDDCKRLQCLPELPSTLQVLIA---- 472

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
                          SLK +       DR  E           EF       +   CL+L
Sbjct: 473 -----------SGCISLKSVASIFMQGDREYE---------AQEF-------NFSGCLQL 505

Query: 619 DPNELSEIIKDGWMK----------QSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           D N  + I+    ++          Q  +G+  I   +  PG+E+P+WF +++   + S+
Sbjct: 506 DQNSRTRIMGATRLRIQRMATSLFYQEYHGKP-IRVRLCIPGSEVPEWFSYKNREGS-SV 563

Query: 669 KTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY 728
           K  QP  +++   F  C VV  S  +      V    +C+L         +G     +SY
Sbjct: 564 KIRQPAHWHRR--FTLCAVV--SFGQSGERRPVNIKCECHLIS------KDGTQIDLNSY 613

Query: 729 LGKI------SHVESDHVFLGS 744
             +I      S  E +HVF+ S
Sbjct: 614 FYEIYEEKVRSLWEREHVFIWS 635


>gi|168030211|ref|XP_001767617.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681146|gb|EDQ67576.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 556

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 174/564 (30%), Positives = 289/564 (51%), Gaps = 35/564 (6%)

Query: 59  LNILHWENLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEIL 116
           ++++H   LVSL +   + +  L   + NL SL ++ L   + L  LP+ +    +L  L
Sbjct: 1   MSVVHLHKLVSLHVADCRSLKALPKSMGNLNSLVKLYLYGCRSLKALPESMGNLNSLVEL 60

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP 175
           DLG C SL     S+  LN L  L+L  C+SL +LP S+ +   L +L L GC +L+ LP
Sbjct: 61  DLGGCESLDALPESMDNLNSLVELNLGGCESLEALPESMGNLNSLVKLDLYGCESLEALP 120

Query: 176 KMTSCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           +    +L S + L   G   ++ LP S+  L+++ EL +  C+ LE +  S+  L  L  
Sbjct: 121 ESMG-NLNSLVKLYLHGCRSLKALPESMGNLNSLVELDLRGCESLEALPESMGNLNSLVE 179

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + ++ C +L+ L     N++          EL L  C   E+LP       SL  L++  
Sbjct: 180 LDLYGCGSLKALPESMGNLNSLV-------ELNLYGCGSLEALPESMGNLNSLVKLDLRG 232

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C   E LP+ +GNL+ L   +    ++  LP+ +G L  L KL+L+ C  L+ +  SI  
Sbjct: 233 CKTLEALPESIGNLKNLKFNLGVCQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGN 292

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKS 411
           L S+  + +  C +L+  PE          I  + S V L L  C  L++LP S+    S
Sbjct: 293 LNSLVKLNLYGCRSLEALPE---------SIGNLNSLVDLNLYGCVSLKALPESIGNLNS 343

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSF 469
           L  L +  C  L+ LP+ +GNL +L +L +     +  + +S+    +L KL L+ C S 
Sbjct: 344 LLDLYLYTCGSLKALPESIGNLNSLVKLNLGVCQSLEALLESIGNFNSLVKLDLRVCKSL 403

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSS 528
           ++LP  +    SL  L +  C++   L + IGNL  L  L + G  +++ +PES+G L+S
Sbjct: 404 KALPESIGNLNSLVKLNLYGCQSLEALQESIGNLNSLVDLNLYGCVSLKALPESIGNLNS 463

Query: 529 LEWLVL-SDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLD 586
           L  L L +  +L+ +PES+  L+SLV   L    +LE +P+ +  L+SL  LDL      
Sbjct: 464 LMDLDLYTCGSLKALPESIGNLNSLVKFNLGVCQSLEALPKSIGNLNSLVKLDL------ 517

Query: 587 RIPEYLRSFPTSIPSEFTSLRLSV 610
           R+ + L++ P SI +  + ++L++
Sbjct: 518 RVCKSLKALPESIGNLNSLVKLNL 541



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 231/481 (48%), Gaps = 42/481 (8%)

Query: 63  HWENLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +LV L + G + +  L + + NL SL ++DL   + L  LP+ +    +L  L L  
Sbjct: 77  NLNSLVELNLGGCESLEALPESMGNLNSLVKLDLYGCESLEALPESMGNLNSLVKLYLHG 136

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MT 178
           C SL     S+  LN L  LDL  C+SL +LP S+ +   L  L L GC +LK LP+ M 
Sbjct: 137 CRSLKALPESMGNLNSLVELDLRGCESLEALPESMGNLNSLVELDLYGCGSLKALPESMG 196

Query: 179 SCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           + +    L L G G +E LP S+  L+++ +L +  CK LE +  SI  L+ L+   +  
Sbjct: 197 NLNSLVELNLYGCGSLEALPESMGNLNSLVKLDLRGCKTLEALPESIGNLKNLK-FNLGV 255

Query: 238 CPNLQFLEMPSCNIDGTRS---------KEQPSS--------ELKLKKCPRPESLPSGQC 280
           C +L+ L     N++             K  P S        +L L  C   E+LP    
Sbjct: 256 CQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPESIG 315

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKN 339
              SL  L +  C + + LP+ +GNL +L  L +    +++ LPE +G L  L KL L  
Sbjct: 316 NLNSLVDLNLYGCVSLKALPESIGNLNSLLDLYLYTCGSLKALPESIGNLNSLVKLNLGV 375

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDG-SGIERIPSSVL 391
           C  LE +  SI    S+  +++  C +LK  PE       +   N+ G   +E +  S+ 
Sbjct: 376 CQSLEALLESIGNFNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCQSLEALQESIG 435

Query: 392 KLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
            LN         C  L++LP S+    SL  L++  C  L+ LP+ +GNL +L +  +  
Sbjct: 436 NLNSLVDLNLYGCVSLKALPESIGNLNSLMDLDLYTCGSLKALPESIGNLNSLVKFNLGV 495

Query: 444 -TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
              +  +PKS+  L +L KL L+ C S ++LP  +    SL  L +  C++   LP  IG
Sbjct: 496 CQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPKSIG 555

Query: 502 N 502
           N
Sbjct: 556 N 556


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 163/520 (31%), Positives = 250/520 (48%), Gaps = 86/520 (16%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPF--TELRYFEWHQFPLKTLNI- 61
            EI+++     +M +LRLLK   S+   KC VH   G+     ELRY  W  +PL +L   
Sbjct: 539  EIELSSTALERMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPCN 598

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
               +NLV L +  S V QLW   QNLV+LK ++L   + +T LPDLS A+NLE L+L +C
Sbjct: 599  FRPQNLVELNLSSSNVKQLWRGDQNLVNLKDVNLSNCEHITLLPDLSKARNLERLNLQFC 658

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KM 177
            +SL +  SS+Q+L+KL  LDL  CK L +LP+  +S +L+ L L GCSN+K  P    K+
Sbjct: 659  TSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRFNSSFLETLNLSGCSNIKKCPETARKL 718

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            T  +L  T       +EELP SI  L  +  L + +CK L N+  +++ L+ L    I  
Sbjct: 719  TYLNLNET------AVEELPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISG 772

Query: 238  CPNLQFLEMPSCNI-----DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            C ++      S NI     +GT  +E PSS   L++                L  L++  
Sbjct: 773  CSSISRFPDFSRNIRYLYLNGTAIEELPSSIGDLRE----------------LIYLDLSG 816

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC------------ 340
            C +    P    N++    L +DGTAIRE+P  + QL +   +   NC            
Sbjct: 817  CSSITEFPKVSRNIR---ELYLDGTAIREIPSSI-QLNVC--VNFMNCTCETANNLRFFQ 870

Query: 341  ---SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
               + +  + S +  LK +  +E+ NC  LKG      C +D                  
Sbjct: 871  AASTGITKLPSPVGNLKGLACLEVGNCKYLKGIE----CLVD------------------ 908

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
                LP      K L  L +  C  + ++PD LG L +LE L + G     +P ++ +L 
Sbjct: 909  --LHLPERDMDLKYLRKLNLDGC-CISKVPDSLGCLSSLEVLDLSGNNFETMPMNIYKLV 965

Query: 458  -LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
             L  L L+ C   +S+P    + + L+ L+  DC++ +++
Sbjct: 966  ELQYLGLRSCRKLKSIPR---LPRRLSKLDAHDCQSLIKV 1002



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 218/462 (47%), Gaps = 75/462 (16%)

Query: 263  ELKLKKCPRPESLPSGQCMFKS--LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIR 320
            +L L+ C R  +LPS    F S  L +L +  C N ++ P+    L  LN   ++ TA+ 
Sbjct: 676  DLDLRGCKRLINLPS---RFNSSFLETLNLSGCSNIKKCPETARKLTYLN---LNETAVE 729

Query: 321  ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFC 376
            ELP+ +G+L  L  L LKNC  L  +  +++ LKS+   +IS CS++  FP+    I + 
Sbjct: 730  ELPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRFPDFSRNIRYL 789

Query: 377  NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             ++G+ IE +PSS+  L                + L  L++  C  +   P    N+   
Sbjct: 790  YLNGTAIEELPSSIGDL----------------RELIYLDLSGCSSITEFPKVSRNIR-- 831

Query: 437  EELRVEGTGIREVPKSLAQLAL------------SKLKLKKCSS--FESLPSRLYVSKSL 482
             EL ++GT IRE+P S+ QL +            + L+  + +S     LPS +   K L
Sbjct: 832  -ELYLDGTAIREIPSSI-QLNVCVNFMNCTCETANNLRFFQAASTGITKLPSPVGNLKGL 889

Query: 483  TSLEIIDCKNF--------MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
              LE+ +CK          + LP+   +L+YL+ L + G  I +VP+SLG LSSLE L L
Sbjct: 890  ACLEVGNCKYLKGIECLVDLHLPERDMDLKYLRKLNLDGCCISKVPDSLGCLSSLEVLDL 949

Query: 535  SDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            S NN + +P ++ +L  L  L L +     ++ R+P RL  L +     L + +   + E
Sbjct: 950  SGNNFETMPMNIYKLVELQYLGLRSCRKLKSIPRLPRRLSKLDAHDCQSLIKVSSSYVVE 1009

Query: 591  YLRSFPTSIPSEFTSLRLSVDLRNCLKL---DPNELSEIIKDGWMKQSVNGETYITKSMY 647
                       EF          NCL+L   +   L  ++K     + ++     T S  
Sbjct: 1010 -------GNIFEFI-------FTNCLRLPVINQILLYSLLKFQLYTERLHQVPAGTSSFC 1055

Query: 648  FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
             PG+  P+WF HQS GST++         ++ +GF+   V+A
Sbjct: 1056 LPGDVTPEWFSHQSWGSTVTFHLSSHWANSEFLGFSLGAVIA 1097


>gi|110741819|dbj|BAE98852.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 703

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 196/614 (31%), Positives = 309/614 (50%), Gaps = 56/614 (9%)

Query: 93  IDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP 152
           +DL+YS  L +LP+LS A NL  + L  CSSL E  SSI     ++ LD+  C SL  LP
Sbjct: 1   MDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLP 60

Query: 153 TSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGV-GIEELPSSIKCLSNIGEL 209
           +SI +   L RL L GCS+L  LP      +    L L+G   + ELPSSI  L N+   
Sbjct: 61  SSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAF 120

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
             + C  L  + SSI  L  L+ + + R  +L  +E+PS     +         L L  C
Sbjct: 121 YFHGCSSLLELPSSIGNLISLKILYLKRISSL--VEIPS-----SIGNLINLKLLNLSGC 173

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEGLGQ 328
                LPS      +L  L++  C +   LP  +GNL  L  L + + +++ ELP  +G 
Sbjct: 174 SSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGN 233

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNIDGSG- 382
           L  L  L L  CS L  + SSI  L +++ + +S CS+L   P      I    +D SG 
Sbjct: 234 LINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC 293

Query: 383 --IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
             +  +P S+        L L++CS L  LPSS+    +L  L + +C  L  LP  +GN
Sbjct: 294 SSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGN 353

Query: 433 LEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           L  L++L + G + + E+P S+  L  L  L L  CSS   LPS +  + +L  L++  C
Sbjct: 354 LINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIG-NLNLKKLDLSGC 412

Query: 491 KNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQ 548
            + + LP  IGNL  LK L + G +++ E+P S+G L +L+ L LS+ ++L  +P S+  
Sbjct: 413 SSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGN 472

Query: 549 LSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLRSFPT------ 597
           L +L  L LS  ++L  +P  +  L +LK LDL +     +L ++P+ L           
Sbjct: 473 LINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESL 532

Query: 598 -SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
            ++   F + ++ +   +C KL+     E  +D  ++ S +  T +      PG E+P +
Sbjct: 533 ETLACSFPNPQVWLKFIDCWKLN-----EKGRDIIVQTSTSNYTML------PGREVPAF 581

Query: 657 FRHQS-TGSTISLK 669
           F +++ TG ++++K
Sbjct: 582 FTYRATTGGSLAVK 595



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 169/496 (34%), Positives = 246/496 (49%), Gaps = 36/496 (7%)

Query: 66  NLVSLK----MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGY 120
           NL++L     M  S + +L   + NL++L R+DL     L +LP  +    NLE      
Sbjct: 65  NLITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHG 124

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH-SKYLKRLVLRGCSNLKNLPKMTS 179
           CSSL E  SSI  L  L++L L R  SL  +P+SI     LK L L GCS+L  LP    
Sbjct: 125 CSSLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIG 184

Query: 180 CHLR-STLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
             +    L L G   + ELP SI  L N+ EL +  C  L  + SSI  L  L+++ +  
Sbjct: 185 NLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSE 244

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C +L  +E+PS    G     Q   EL L +C     LPS      +L  L++  C +  
Sbjct: 245 CSSL--VELPSS--IGNLINLQ---ELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLV 297

Query: 298 RLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LP  +GNL  L  L + + +++ ELP  +G L  L +L L  CS L  + SSI  L ++
Sbjct: 298 ELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINL 357

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           + +++S CS+L   P +   N+       I    L L+ CS L  LPSS+     L  L+
Sbjct: 358 KKLDLSGCSSLVELP-LSIGNL-------INLKTLNLSGCSSLVELPSSIGNLN-LKKLD 408

Query: 417 IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
           +  C  L  LP  +GNL  L++L + G + + E+P S+  L  L +L L +CSS   LPS
Sbjct: 409 LSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPS 468

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI----KGTAIREVPESLGQL---- 526
            +    +L  L + +C + + LP  IGNL  LK L +    K  ++ ++P+SL  L    
Sbjct: 469 SIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAES 528

Query: 527 -SSLEWLVLSDNNLQI 541
             SLE L  S  N Q+
Sbjct: 529 CESLETLACSFPNPQV 544



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 124/259 (47%), Gaps = 17/259 (6%)

Query: 62  LHWENLVSLKMPG----SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEIL 116
           L   NL++LK       S + +L   + NL++L+ + L     L +LP  +    NL+ L
Sbjct: 301 LSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKL 360

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           DL  CSSL E   SI  L  L+ L+L  C SL  LP+SI +  LK+L L GCS+L  LP 
Sbjct: 361 DLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPS 420

Query: 177 MTSCHLR-STLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
                +    L L G   + ELP SI  L N+ EL +  C  L  + SSI  L  L+ + 
Sbjct: 421 SIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELY 480

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           +  C +L  +E+PS   +    K     +L L KC +  SLP    +  SL+ L    C 
Sbjct: 481 LSECSSL--VELPSSIGNLINLK-----KLDLNKCTKLVSLPQ---LPDSLSVLVAESCE 530

Query: 295 NFERLPDELGNLQALNRLI 313
           + E L     N Q   + I
Sbjct: 531 SLETLACSFPNPQVWLKFI 549


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 261/544 (47%), Gaps = 100/544 (18%)

Query: 87   LVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
            L SLK IDL +S  L ++P+ S   NLE L L  C SL     S+  L KL  LDL  C 
Sbjct: 602  LQSLKVIDLSHSNKLVQMPEFSSMPNLEELILKGCVSLINIDPSVGDLKKLTTLDLRGCV 661

Query: 147  SLTSLPTSIHS-KYLKRLVLRGCSNLK----------NLPKMTSCHLRSTLPLLGVGIEE 195
             L  LP+SI + + L+ L L  CS+            N+  +T  +LR T       I E
Sbjct: 662  KLKGLPSSISNLEALECLDLTRCSSFDKFAEIQGIQGNMSSLTHLYLRKT------AIRE 715

Query: 196  LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
            LPSSI  L ++  L +  C + E    +   ++ L  +R                ++ T 
Sbjct: 716  LPSSID-LESVEILDLSDCSKFEKFPENGANMKSLNDLR----------------LENTA 758

Query: 256  SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
             KE                LP+G   ++SL  L++  C  FE+ P++ GN+++L +L  +
Sbjct: 759  IKE----------------LPTGIANWESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFN 802

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEY-----------------------ISSSIFK 352
            GT+I++LP+ +G L  L  L+L  CS+ E                        +  SI  
Sbjct: 803  GTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGD 862

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKS 411
            L+S+E +++S CS  + FPE       G  ++    S+ KL+ K + ++ LP S+   +S
Sbjct: 863  LESLEILDLSYCSKFEKFPE------KGGNMK----SLKKLHLKNTAIKDLPDSIGDLES 912

Query: 412  LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
            L  L++  C K E+ P++ GN+++L++L +  T I+++P S+  L +L  L L +CS FE
Sbjct: 913  LEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILHLSECSKFE 972

Query: 471  SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
              P +                N  ++  E    E +K +++  TAI+++P+S+G L SLE
Sbjct: 973  KFPEK--------------GGNMKKISGEGREHEKIKAVSLINTAIKDLPDSIGDLESLE 1018

Query: 531  WLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             L LS+ +  +  PE    + SL  L L N  ++ +P+ +  L SLK L+L    +  +P
Sbjct: 1019 SLDLSECSKFEKFPEKGGNMKSLKELYLINTAIKDLPDSIGGLESLKILNLKNTAIKDLP 1078

Query: 590  EYLR 593
               R
Sbjct: 1079 NISR 1082



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 76/420 (18%)

Query: 75   SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT---ETHSSI 131
            SK  +  ++  N+ SL  + L+ + +      ++  ++LEILDL YCS      E   ++
Sbjct: 734  SKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNM 793

Query: 132  QYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLL 189
            + L KL         S+  LP SI   + L+ L L  CS  +  P K  +      L   
Sbjct: 794  KSLKKLRF----NGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFN 849

Query: 190  GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
            G  I++LP SI  L ++  L +  C + E        ++ L+ +                
Sbjct: 850  GTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKL---------------- 893

Query: 250  NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNL 306
            ++  T  K+ P S                      L SLEI+D   C  FE+ P++ GN+
Sbjct: 894  HLKNTAIKDLPDS-------------------IGDLESLEILDLSKCLKFEKFPEKGGNM 934

Query: 307  QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
            ++L +L +  TAI++LP+ +G                         L+S+E + +S CS 
Sbjct: 935  KSLKKLSLINTAIKDLPDSVGD------------------------LESLEILHLSECSK 970

Query: 367  LKGFPEIP--FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
             + FPE       I G G E      + L   + ++ LP S+   +SL SL++ +C K E
Sbjct: 971  FEKFPEKGGNMKKISGEGREHEKIKAVSLINTA-IKDLPDSIGDLESLESLDLSECSKFE 1029

Query: 425  RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP--SRLYVSKSL 482
            + P++ GN+++L+EL +  T I+++P S+  L   K+   K ++ + LP  SRL   K L
Sbjct: 1030 KFPEKGGNMKSLKELYLINTAIKDLPDSIGGLESLKILNLKNTAIKDLPNISRLKFLKRL 1089



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 209/456 (45%), Gaps = 39/456 (8%)

Query: 11   NPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRY-FEWHQFPLKTLNILHWENLVS 69
            N      + +LRL      +    + + E +   +L Y  ++ +FP K  N+   ++L  
Sbjct: 742  NGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNM---KSLKK 798

Query: 70   LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILDLGYCSSLTETH 128
            L+  G+ +  L D + +L SL+ +DL Y     K P+     ++L+ L     +S+ +  
Sbjct: 799  LRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFN-GTSIKDLP 857

Query: 129  SSIQYLNKLEVLDLDRCKSLTSLP-TSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
             SI  L  LE+LDL  C      P    + K LK+L L+  + +K+LP   S     +L 
Sbjct: 858  DSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTA-IKDLP--DSIGDLESLE 914

Query: 188  LLGVG----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
            +L +      E+ P     + ++ +L + +   ++++  S+  L+ LE + +  C   + 
Sbjct: 915  ILDLSKCLKFEKFPEKGGNMKSLKKLSLINTA-IKDLPDSVGDLESLEILHLSECSKFEK 973

Query: 244  LEMPSCNIDGTRSKEQPSSELKLKKCPRP--ESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
                  N+     + +   ++K         + LP      +SL SL++ +C  FE+ P+
Sbjct: 974  FPEKGGNMKKISGEGREHEKIKAVSLINTAIKDLPDSIGDLESLESLDLSECSKFEKFPE 1033

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            + GN+++L  L +  TAI++LP+ +G L  L  L LKN +  +    +I +LK ++ + +
Sbjct: 1034 KGGNMKSLKELYLINTAIKDLPDSIGGLESLKILNLKNTAIKDL--PNISRLKFLKRLIL 1091

Query: 362  SNCSNL-KGFPEIPFCNIDGSGIER---------IPSSV--LKLNKCSKLESLPSSLCM- 408
             + S++ +G      CN+    I +         +PSS+  +  + C+  E L   L + 
Sbjct: 1092 CDRSDMWEGLISNQLCNLQKPNISQCEMARQIPVLPSSLEEIDAHHCTSKEDLSGLLWLC 1151

Query: 409  ---FKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
               +   T+ E+   K   R+P+  G    ++E R+
Sbjct: 1152 HRNWLKSTAEELKSWKLSARIPESSG----IQEWRI 1183


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 166/507 (32%), Positives = 238/507 (46%), Gaps = 80/507 (15%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSK------------------NKCMVHSLEGVPF--TEL 46
            E+  +   F+KM +LR+L+F  ++                   +C  H      F    L
Sbjct: 551  ELHFSVNVFTKMNKLRVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHL 610

Query: 47   RYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
            R   W  +PLK+L +  H E L+ LKM  S++ QLW+  ++   LK I+L +S+ L K P
Sbjct: 611  RSLYWDGYPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTP 670

Query: 106  DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            D S A  L  + L  C+SL + H SI  L KL  L+L+ CK+L S  +SIH + L+ L L
Sbjct: 671  DFSGAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTL 730

Query: 166  RGCSNLKNLPKMTS-CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
             GCS LK  P++       S L L G  I+ LP SI+ L+ +  L +  CK LE++ S I
Sbjct: 731  SGCSKLKKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCI 790

Query: 225  FKLQFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSS--------ELKLKK 268
            FKL+ L+++ +  C  L+ L     N        +D T  +E PSS         LKLK 
Sbjct: 791  FKLKSLKTLILSNCSRLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKN 850

Query: 269  CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
            C R  SLP   C   SL +L +  C   ++LPD++G+LQ L +L  +G+ I+E+P  +  
Sbjct: 851  CKRLASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPTSITL 910

Query: 329  LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
            L  L  L L  C                     S   NL               +   P+
Sbjct: 911  LTKLQVLSLAGCKG-----------------GGSKSKNL------------ALSLRASPT 941

Query: 389  SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIR 447
              L+L          SSL +  SL  L + DC  LE  LP +L +L  LE L +      
Sbjct: 942  DGLRL----------SSLTVLHSLKKLNLSDCNLLEGALPSDLSSLSWLECLDLSRNSFI 991

Query: 448  EVPKSLAQLA-LSKLKLKKCSSFESLP 473
             VP SL++L  L +L L+ C S  SLP
Sbjct: 992  TVP-SLSRLPRLERLILEHCKSLRSLP 1017



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 187/650 (28%), Positives = 292/650 (44%), Gaps = 115/650 (17%)

Query: 234  RIHRCPNLQFL--EMPSCNIDGTRSKEQPSSE-----LKLKKC-PRPESLPSGQCMFKSL 285
            + H   + +FL   + S   DG   K  PS+      L+LK C  + E L  G   F+ L
Sbjct: 596  KFHLSGDFKFLSNHLRSLYWDGYPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKL 655

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
              +E+    +  + PD  G  + L R+I++G T++ ++   +G L  L  L L+ C  L+
Sbjct: 656  KFIELSHSQHLIKTPDFSGAPK-LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLK 714

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEI--PFCN-----IDGSGIERIPSSV------- 390
               SSI  L+S++ + +S CS LK FPE+  P  N     + G+ I+ +P S+       
Sbjct: 715  SFLSSI-HLESLQILTLSGCSKLKKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLA 773

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
             L L +C  LESLPS +   KSL +L + +C +L++LP+   N+E+L+EL ++ TG+RE+
Sbjct: 774  LLNLEECKSLESLPSCIFKLKSLKTLILSNCSRLKKLPEIGENMESLKELFLDDTGLREL 833

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P S+  L  L  LKLK C    SLP       SL +L +  C    +LPD++G+L+ L  
Sbjct: 834  PSSIEHLNGLVLLKLKNCKRLASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK 893

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVL---------SDN---NLQIIP------ESLNQLS 550
            L   G+ I+EVP S+  L+ L+ L L         S N   +L+  P       SL  L 
Sbjct: 894  LKANGSGIQEVPTSITLLTKLQVLSLAGCKGGGSKSKNLALSLRASPTDGLRLSSLTVLH 953

Query: 551  SLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIP----------------EYL 592
            SL  L LS+ NL    +P  L  LS L+ LDL  N+   +P                + L
Sbjct: 954  SLKKLNLSDCNLLEGALPSDLSSLSWLECLDLSRNSFITVPSLSRLPRLERLILEHCKSL 1013

Query: 593  RSFP-------------------TSIPSEFTSLRLSVDLR----NCLKLDPNELSEIIK- 628
            RS P                    S PS   + R S  L     NC +L  NE S+ ++ 
Sbjct: 1014 RSLPELPSSVEELLANDCTSLETISNPSSAYAWRNSGHLYSEFCNCFRLVENEQSDNVEA 1073

Query: 629  ------------DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGY 676
                        +      +  +  I      PG+ IP+WF HQS   +++++ P     
Sbjct: 1074 ILRGIRLVASIPNSVAPSDIQRDLSIVYDAVVPGSSIPEWFTHQSERCSVTVELPPHWCN 1133

Query: 677  NKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE 736
             +LMG A CVV   ++        +    +   F +     S G+  + +     +   +
Sbjct: 1134 TRLMGLAVCVVFHANI-------GMGKFGRSAYFSM---NESGGFSLHNTV---SMHFSK 1180

Query: 737  SDHVFLGSSIFAGENSCKRSDEF---FFHIDRSCCEVKKCGIHFVHAQRQ 783
            +DH++ G     G+      D     F   +R+   VKKCG+  V  Q +
Sbjct: 1181 ADHIWFGYRPLFGDVFSSSIDHLKVSFAGSNRAGEVVKKCGVRLVFEQDE 1230


>gi|168044488|ref|XP_001774713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674013|gb|EDQ60528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 529

 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 174/516 (33%), Positives = 264/516 (51%), Gaps = 33/516 (6%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           + +  L +++ NL SL+ + L     L  LP+ L+   NL  LDL YCSSLT   + +  
Sbjct: 5   TSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPNELAN 64

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR--STLPLLG 190
           L+ L+ LDL  C SL  LP  + +   L RL L GCS+L +LP      LR  S+L  L 
Sbjct: 65  LSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPN----ELRNLSSLEELD 120

Query: 191 V----GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
           +     +  LP+ +  LS++  L++  C  L ++ + +  L  LE +R++ C +L  L  
Sbjct: 121 LSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCSSLTSLPN 180

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+           EL L  C    +LP+      SLT L++  C +   LP+EL NL
Sbjct: 181 KLRNLSSLE-------ELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTNL 233

Query: 307 QALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +L RL + G +++  LP  L  L+ L++L+L  CS L  + + +  L S+  +++S CS
Sbjct: 234 SSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCS 293

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           +L   P     N+  S +E      L LN CS L SLP+ L    SLT L++  C  L  
Sbjct: 294 SLTSLPN-ELENL--SFLEE-----LGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLTS 345

Query: 426 LPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLT 483
           LP+EL NL +L  L + G + +  +P  LA + +L+ L L+ CSS  SLP+      SLT
Sbjct: 346 LPNELTNLSSLTRLDLSGCSSLTSLPNELANISSLTTLYLRGCSSLRSLPNESVHISSLT 405

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDN-NLQI 541
            L      +   L +E+ NL  L  L + G ++++ +P  L   +SL  L LS   +L  
Sbjct: 406 ILYFHGYVSLTSLLNELVNLSSLMTLDLNGCSSLKSLPNELTNFTSLTILDLSGRLSLTS 465

Query: 542 IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLK 576
           +P     LSSL  L LS+ ++L  +P  L  LSSLK
Sbjct: 466 LPNEFTNLSSLKELVLSHCSSLTSLPNELTNLSSLK 501



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 193/374 (51%), Gaps = 23/374 (6%)

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE 273
           C  L ++ + I  L  LE + ++ C +L+ L     N+   R        L L+ C    
Sbjct: 4   CTSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLR-------RLDLRYCSSLT 56

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALL 332
           SLP+      SL  L++  C +  RLP+EL NL +L RL + G +++  LP  L  L+ L
Sbjct: 57  SLPNELANLSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSL 116

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVL 391
            +L+L +CS L  + + +  L S+  + +S CS+L   P           +E + S   L
Sbjct: 117 EELDLSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPN---------ELENLSSLEEL 167

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
           +LN CS L SLP+ L    SL  L++  C  L  LP+EL NL +L  L + G + +  +P
Sbjct: 168 RLNNCSSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLP 227

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             L  L +L++L L  CSS  SLP+ L    SLT L++  C +   LP+E+ NL  L  L
Sbjct: 228 NELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRL 287

Query: 510 TIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            + G +++  +P  L  LS LE L L+  ++L  +P  L  LSSL  L LS  ++L  +P
Sbjct: 288 DLSGCSSLTSLPNELENLSFLEELGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLP 347

Query: 567 ERLDPLSSLKYLDL 580
             L  LSSL  LDL
Sbjct: 348 NELTNLSSLTRLDL 361



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 198/385 (51%), Gaps = 32/385 (8%)

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID-GTAIRELPE 324
           + +C    SLP+      SL  L +  C + + LP+EL NL  L RL +   +++  LP 
Sbjct: 1   MTRCTSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPN 60

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
            L  L+ L +L+L +CS L  + + +  L S+  +++S CS+L   P     N+  S +E
Sbjct: 61  ELANLSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPN-ELRNL--SSLE 117

Query: 385 RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG- 443
                 L L+ CS L +LP+ L    SLT L +  C  L  LP+EL NL +LEELR+   
Sbjct: 118 E-----LDLSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNC 172

Query: 444 TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
           + +  +P  L  L +L +L L  CSS  +LP+ L    SLT L++  C +   LP+E+ N
Sbjct: 173 SSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTN 232

Query: 503 LEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN- 559
           L  L  L + G +++  +P  L  LSSL  L LS  ++L  +P  L  LSSL  L LS  
Sbjct: 233 LSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGC 292

Query: 560 NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFP-------------TSIPSEFTS 605
           ++L  +P  L+ LS L+ L L   ++L  +P  L +               TS+P+E T+
Sbjct: 293 SSLTSLPNELENLSFLEELGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTN 352

Query: 606 LR--LSVDLRNCLKLD--PNELSEI 626
           L     +DL  C  L   PNEL+ I
Sbjct: 353 LSSLTRLDLSGCSSLTSLPNELANI 377



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 213/455 (46%), Gaps = 67/455 (14%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L  L + G S +T L ++++NL SL+ + L     LT LP+ L    +LE LDL +
Sbjct: 136 NLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCSSLTSLPNKLRNLSSLEELDLSH 195

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMT 178
           CSSLT   + +  L+ L  LDL  C SLTSLP  + +   L RL L GCS+L +LP ++T
Sbjct: 196 CSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELT 255

Query: 179 SCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           +    + L L G   +  LP+ +  LS++  L +  C  L ++ + +  L FLE      
Sbjct: 256 NLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELENLSFLE------ 309

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
                                    EL L  C    SLP+      SLT L++  C +  
Sbjct: 310 -------------------------ELGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLT 344

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LP+EL NL +L RL + G +++  LP  L  ++ L+ L L+ CS L  + +        
Sbjct: 345 SLPNELTNLSSLTRLDLSGCSSLTSLPNELANISSLTTLYLRGCSSLRSLPN-------- 396

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           ES+ IS+ + L     +   ++    +       L LN CS L+SLP+ L  F SLT L+
Sbjct: 397 ESVHISSLTILYFHGYVSLTSLLNELVNLSSLMTLDLNGCSSLKSLPNELTNFTSLTILD 456

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
           +     L  LP+E  NL +L+E                      L L  CSS  SLP+ L
Sbjct: 457 LSGRLSLTSLPNEFTNLSSLKE----------------------LVLSHCSSLTSLPNEL 494

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
               SL  L++  C +   LP+E+ NL  L  L +
Sbjct: 495 TNLSSLKELDLSSCSSLRSLPNELANLSSLTRLDL 529


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 236/497 (47%), Gaps = 101/497 (20%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
             S  +++CPN    P        + RLI+DG T++ E+   + +L  L+ L +KNC  L 
Sbjct: 642  NSQHLVECPNLSGAPH-------VKRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLH 694

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV------- 390
            +  S I  L+S++ + +S CS L  FPEI          N++G+ I  +PSSV       
Sbjct: 695  HFPS-ITGLESLKVLNLSGCSKLDKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLV 753

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
             L +  C  L+ LPS++C  KSL +L    C  LE  P+ +  +E+L++L ++GT I+E+
Sbjct: 754  SLDMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKEL 813

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P S+  L  L  L L+KC +  SLP+ +   +SL +L +  C N  +LP+E+G+L+YL +
Sbjct: 814  PPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMI 873

Query: 509  LTIKGTAIREVPESLGQLS----------------------------------------- 527
            L   GTAI + P SL  L                                          
Sbjct: 874  LQADGTAITQPPFSLVHLRNLKELSFRGCKGSTSNSWIXSLVFRLLRRENSDGTGLQLPY 933

Query: 528  -----SLEWLVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
                 SL++L LS  NL    I ++L +L  L  L LS NNL  +PE +  LS+L+ L +
Sbjct: 934  LSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRNNLVMVPEGVHRLSNLRVLSV 993

Query: 581  FE----NNLDRIPEYLRSFPTS--IPSEFTSLR----------------LSVDLRNCLKL 618
             +      + ++P  ++S      I  EF S+                 LS  L NC  L
Sbjct: 994  NQCKSLQEISKLPPSIKSLDAGDCISLEFLSIPSPQSPQYLSSSSCLHPLSFKLSNCFAL 1053

Query: 619  DPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK 678
              + ++ I++    K   N    I  S+  PG+ IP+WF+H S GS+ +++ P P  +NK
Sbjct: 1054 AQDNVATILE----KLHQNFLPEIEYSIVLPGSTIPEWFQHPSIGSSETIELP-PNWHNK 1108

Query: 679  -LMGFAFCVVVACSVSE 694
              +GFA C V      E
Sbjct: 1109 DFLGFALCSVFTLEEDE 1125



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 162/528 (30%), Positives = 246/528 (46%), Gaps = 85/528 (16%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------------PFTELRYFEWHQF 54
            EI +    F KM +LRLL+        + H+L+ +            P  ELRY  W  +
Sbjct: 547  EIHLTTDAFKKMKKLRLLR--------VYHNLKNISDTIHLPQDFKFPSHELRYLHWDGW 598

Query: 55   PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
             L++L +  H E LV L +  S + +LW + + L  LK I+L  S+ L + P+LS A ++
Sbjct: 599  TLESLPSNFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHV 658

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            + L L  C+SL E H S+  L +L +L++  CK L   P+    + LK L L GCS L  
Sbjct: 659  KRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDK 718

Query: 174  LPKMTS-CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
             P++       S L L G  I ELPSS+  L  +  L + +CK L+ + S+I  L+ LE+
Sbjct: 719  FPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLET 778

Query: 233  IRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLP 276
            +    C  L+           +    +DGT  KE P S         L L+KC    SLP
Sbjct: 779  LVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLP 838

Query: 277  SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
            +  C  +SL +L +  C N  +LP+ELG+LQ L  L  DGTAI + P  L  L  L +L 
Sbjct: 839  NSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELS 898

Query: 337  LKNC---SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
             + C   +   +I S +F+L   E                   N DG+G++         
Sbjct: 899  FRGCKGSTSNSWIXSLVFRLLRRE-------------------NSDGTGLQ--------- 930

Query: 394  NKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKS 452
                    LP  L    SL  L++  C   +  + D LG L  LEEL +    +  VP+ 
Sbjct: 931  --------LP-YLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRNNLVMVPEG 981

Query: 453  LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLP 497
            + +L+ L  L + +C S + +     +  S+ SL+  DC +  F+ +P
Sbjct: 982  VHRLSNLRVLSVNQCKSLQEISK---LPPSIKSLDAGDCISLEFLSIP 1026


>gi|317106744|dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/419 (33%), Positives = 215/419 (51%), Gaps = 58/419 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC-----MVHSLEGVPF--TELRYFEWHQFPLKTL 59
           EI +    F+ M  LR LKF  SK+       M     G+ F  T LRY  W+  P+KTL
Sbjct: 538 EICLRRDAFAGMHNLRYLKFYESKDIAHGGGKMQPYDGGLRFLPTALRYLHWYGCPVKTL 597

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
                 ENLV L+MP S+V +LW  VQ LV+LK+IDL +S+ L K+PDLS A N+E ++L
Sbjct: 598 PAYFGAENLVVLEMPESRVKKLWTGVQYLVNLKQIDLSWSEYLIKIPDLSKAINIERINL 657

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
             C+SL E HSS Q+L KLE L L  C ++ S+P+SI SK ++ + L  C  +K  P++ 
Sbjct: 658 QGCTSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSIGSKVIRCVDLSYCLKVKRCPEIL 717

Query: 179 SCHLRSTLPLLGV-GIEELP--SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
           S      L L G+  + + P  ++ +  S   EL + +C++L ++ SSI K + L+ + +
Sbjct: 718 SWKFLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLLSLPSSICKWKSLKYLYL 777

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
             C  L+                             PE L        +L  +++  C N
Sbjct: 778 SNCSKLESF---------------------------PEILEP-----MNLVEIDMNKCKN 805

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +RLP+ + NL+ L  L + GTAI E+P  +  L  L+ L+L +C  LE + S I KL  
Sbjct: 806 LKRLPNSIYNLKYLESLYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQ 865

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS--KLESLPSSLCMFKSL 412
           ++ + + +C +L+  P+             +P S+L L+ CS   LE++P  L  +  +
Sbjct: 866 LQRMYLHSCESLRSLPD-------------LPQSLLHLDVCSCKLLETIPCGLYKYDKI 911



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 127/255 (49%), Gaps = 20/255 (7%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           + ++ L+ C+ L  + SS   LK +E + +S C N++  P        GS + R     +
Sbjct: 652 IERINLQGCTSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSI-----GSKVIR----CV 702

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN--LEALEELR-VEGTGIRE 448
            L+ C K++  P  L  +K L  L +     L + PD          +EL  V    +  
Sbjct: 703 DLSYCLKVKRCPEILS-WKFLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLLS 761

Query: 449 VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P S+ +  +L  L L  CS  ES P  L    +L  +++  CKN  RLP+ I NL+YL+
Sbjct: 762 LPSSICKWKSLKYLYLSNCSKLESFPEILE-PMNLVEIDMNKCKNLKRLPNSIYNLKYLE 820

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL-SNNNLERI 565
            L +KGTAI E+P S+  L+ L  L LSD  NL+ +P  +++L  L  + L S  +L  +
Sbjct: 821 SLYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSL 880

Query: 566 PERLDPLSSLKYLDL 580
           P   D   SL +LD+
Sbjct: 881 P---DLPQSLLHLDV 892



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 131/305 (42%), Gaps = 45/305 (14%)

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT--SLEIIDCPNFE 297
           NL  LEMP   +    +  Q    LK       E L     + K++    + +  C +  
Sbjct: 605 NLVVLEMPESRVKKLWTGVQYLVNLKQIDLSWSEYLIKIPDLSKAINIERINLQGCTSLV 664

Query: 298 RLPDELGNLQALNRLIIDGTA-IRELPEGLGQ-----LALLSKLELKNCSELEYISSSIF 351
            L     +L+ L  L +     +R +P  +G      + L   L++K C E       I 
Sbjct: 665 ELHSSTQHLKKLEFLALSCCVNVRSIPSSIGSKVIRCVDLSYCLKVKRCPE-------IL 717

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
             K ++ + +   SNL  FP+I    I  SG +      L +  C KL SLPSS+C +KS
Sbjct: 718 SWKFLKVLRLEGMSNLVKFPDIAATEI-SSGCDE-----LSMVNCEKLLSLPSSICKWKS 771

Query: 412 LTSLEIIDCKKLE-----------------------RLPDELGNLEALEELRVEGTGIRE 448
           L  L + +C KLE                       RLP+ + NL+ LE L ++GT I E
Sbjct: 772 LKYLYLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYNLKYLESLYLKGTAIEE 831

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P S+  L  L+ L L  C + E LPS +     L  + +  C++   LPD   +L +L 
Sbjct: 832 IPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSLPDLPQSLLHLD 891

Query: 508 VLTIK 512
           V + K
Sbjct: 892 VCSCK 896


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/455 (32%), Positives = 225/455 (49%), Gaps = 68/455 (14%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGS-------------KNKCMV--HSLEGVPFTEL 46
           SK  SEI++ P  FS+M  LR LKF  S             K+K  +    L+ +P  EL
Sbjct: 548 SKATSEIRLKPDAFSRMCRLRFLKFYKSPGDFYRSPGDRHSKDKLQISRDGLQSLP-NEL 606

Query: 47  RYFEWHQFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
           R+  W  FP+K+L    + ENLV L +  SKV +LW   QNLV LK IDL  SK L  +P
Sbjct: 607 RHLYWIDFPMKSLPPSFNPENLVVLHLRNSKVKKLWTGTQNLVKLKEIDLSGSKYLIGIP 666

Query: 106 DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
           DLS A  +E +DL  C +L E HSSIQYLNKLE L+L  C  L  LP  I SK LK L L
Sbjct: 667 DLSKAIYIEKIDLSDCDNLEEVHSSIQYLNKLEFLNLWHCNKLRRLPRRIDSKVLKVLKL 726

Query: 166 RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL---SNIGELLIYSCKRLENISS 222
            G + +K  P+     L     L    I+ +  ++  +   S +  L +Y C+RL  + S
Sbjct: 727 -GSTRVKRCPEFQGNQLEDVF-LYCPAIKNVTLTVLSILNSSRLVHLFVYRCRRLSILPS 784

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
           S +KL+ L+S+ +  C  L+                             PE L     +F
Sbjct: 785 SFYKLKSLKSLDLLHCSKLESF---------------------------PEILEPMYNIF 817

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           K    +++  C N +  P+ + NL +L  L + GTAI+++P  +  L+ L  L+LK+C  
Sbjct: 818 K----IDMSYCRNLKSFPNSISNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKY 873

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           L+ +  SI +L  +E + +++C +L   PE+P      S +++     L+   C  LE +
Sbjct: 874 LDSLPVSIRELPQLEEMYLTSCESLHSLPELP------SSLKK-----LRAENCKSLERV 922

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
            S    +K+L      +C +L++   ++ +L   E
Sbjct: 923 TS----YKNLGEATFANCLRLDQKSFQITDLRVPE 953



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 211/514 (41%), Gaps = 119/514 (23%)

Query: 257  KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP-NFERLPDELGNLQALNRLIID 315
            K + +SE++LK    P++  S  C    L  L+    P +F R P   G+  + ++L I 
Sbjct: 547  KSKATSEIRLK----PDAF-SRMC---RLRFLKFYKSPGDFYRSP---GDRHSKDKLQIS 595

Query: 316  GTAIRELPEGLGQLAL----------------LSKLELKNCSELEYISSSIFKLKSVESI 359
               ++ LP  L  L                  L  L L+N S+++ + +    L  ++ I
Sbjct: 596  RDGLQSLPNELRHLYWIDFPMKSLPPSFNPENLVVLHLRN-SKVKKLWTGTQNLVKLKEI 654

Query: 360  EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            ++S    L G P++         IE+I      L+ C  LE + SS+     L  L +  
Sbjct: 655  DLSGSKYLIGIPDLS----KAIYIEKI-----DLSDCDNLEEVHSSIQYLNKLEFLNLWH 705

Query: 420  CKKLERLPDELGNLEALEELRVEGTGIREVPK--------------SLAQLALSKLKL-- 463
            C KL RLP  + + + L+ L++  T ++  P+              ++  + L+ L +  
Sbjct: 706  CNKLRRLPRRIDS-KVLKVLKLGSTRVKRCPEFQGNQLEDVFLYCPAIKNVTLTVLSILN 764

Query: 464  ---------------------------------KKCSSFESLPSRLYVSKSLTSLEIIDC 490
                                               CS  ES P  L    ++  +++  C
Sbjct: 765  SSRLVHLFVYRCRRLSILPSSFYKLKSLKSLDLLHCSKLESFPEILEPMYNIFKIDMSYC 824

Query: 491  KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQL 549
            +N    P+ I NL  L  L + GTAI+++P S+  LS L++L L D   L  +P S+ +L
Sbjct: 825  RNLKSFPNSISNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKYLDSLPVSIREL 884

Query: 550  SSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSL 606
              L  + L++  +L  +PE    L  L+     EN  +L+R+  Y      +        
Sbjct: 885  PQLEEMYLTSCESLHSLPELPSSLKKLRA----ENCKSLERVTSYKNLGEATFA------ 934

Query: 607  RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTI 666
                   NCL+LD       I D  + + +  E Y    + +PG+E+P  F  QS GS++
Sbjct: 935  -------NCLRLDQKSFQ--ITDLRVPECIYKERY----LLYPGSEVPGCFSSQSMGSSV 981

Query: 667  SLKTPQPTGYNKLM-GFAFCVVVACSVSECCRHE 699
            ++   Q +   KL    AFCVV     S  C  E
Sbjct: 982  TM---QSSLNEKLFKDAAFCVVFEFKKSSDCVFE 1012


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 236/496 (47%), Gaps = 101/496 (20%)

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEY 345
            S  +++CPN    P        + RLI+DG T++ E+   + +L  L+ L +KNC  L +
Sbjct: 630  SQHLVECPNLSGAPH-------VKRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHH 682

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV-------- 390
              S I  L+S++ + +S CS L  FPEI          N++G+ I  +PSSV        
Sbjct: 683  FPS-ITGLESLKVLNLSGCSKLDKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVS 741

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L +  C  L+ LPS++C  KSL +L    C  LE  P+ +  +E+L++L ++GT I+E+P
Sbjct: 742  LDMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELP 801

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+  L  L  L L+KC +  SLP+ +   +SL +L +  C N  +LP+E+G+L+YL +L
Sbjct: 802  PSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMIL 861

Query: 510  TIKGTAIREVPESLGQLS------------------------------------------ 527
               GTAI + P SL  L                                           
Sbjct: 862  QADGTAITQPPFSLVHLRNLKELSFRGCKGSTSNSWISSLVFRLLRRENSDGTGLQLPYL 921

Query: 528  ----SLEWLVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
                SL++L LS  NL    I ++L +L  L  L LS NNL  +PE +  LS+L+ L + 
Sbjct: 922  SGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRNNLVMVPEGVHRLSNLRVLSVN 981

Query: 582  E----NNLDRIPEYLRSFPTS--IPSEFTSLR----------------LSVDLRNCLKLD 619
            +      + ++P  ++S      I  EF S+                 LS  L NC  L 
Sbjct: 982  QCKSLQEISKLPPSIKSLDAGDCISLEFLSIPSPQSPQYLSSSSCLHPLSFKLSNCFALA 1041

Query: 620  PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK- 678
             + ++ I++    K   N    I  S+  PG+ IP+WF+H S GS+ +++ P P  +NK 
Sbjct: 1042 QDNVATILE----KLHQNFLPEIEYSIVLPGSTIPEWFQHPSIGSSETIELP-PNWHNKD 1096

Query: 679  LMGFAFCVVVACSVSE 694
             +GFA C V      E
Sbjct: 1097 FLGFALCSVFTLEEDE 1112



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 247/528 (46%), Gaps = 85/528 (16%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------------PFTELRYFEWHQF 54
            EI +    F KM +LRLL+        + H+L+ +            P  ELRY  W  +
Sbjct: 534  EIHLTTDAFKKMKKLRLLR--------VYHNLKNISDTIHLPQDFKFPSHELRYLHWDGW 585

Query: 55   PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
             L++L +  H E LV L +  S + +LW + + L  LK I+L  S+ L + P+LS A ++
Sbjct: 586  TLESLPSNFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHV 645

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            + L L  C+SL E H S+  L +L +L++  CK L   P+    + LK L L GCS L  
Sbjct: 646  KRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDK 705

Query: 174  LPKMTS-CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
             P++       S L L G  I ELPSS+  L  +  L + +CK L+ + S+I  L+ LE+
Sbjct: 706  FPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLET 765

Query: 233  IRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLP 276
            +    C  L+           +    +DGT  KE P S         L L+KC    SLP
Sbjct: 766  LVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLP 825

Query: 277  SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
            +  C  +SL +L +  C N  +LP+ELG+LQ L  L  DGTAI + P  L  L  L +L 
Sbjct: 826  NSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELS 885

Query: 337  LKNC---SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
             + C   +   +ISS +F+L   E                   N DG+G++         
Sbjct: 886  FRGCKGSTSNSWISSLVFRLLRRE-------------------NSDGTGLQ--------- 917

Query: 394  NKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKS 452
                    LP  L    SL  L++  C   +  + D LG L  LEEL +    +  VP+ 
Sbjct: 918  --------LP-YLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRNNLVMVPEG 968

Query: 453  LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLP 497
            + +L+ L  L + +C S + +     +  S+ SL+  DC +  F+ +P
Sbjct: 969  VHRLSNLRVLSVNQCKSLQEISK---LPPSIKSLDAGDCISLEFLSIP 1013


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 161/507 (31%), Positives = 238/507 (46%), Gaps = 79/507 (15%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSK------------------NKCMVHSLEGVPF--TEL 46
            E+  +   F+KM +LR+L+F  ++                   +C  H      F    L
Sbjct: 546  ELHFSVNVFTKMNKLRVLRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHL 605

Query: 47   RYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
            R   W  +PLK+L +  H E L+ LKM  S++ QLW+  ++   LK I+L +S+ L K P
Sbjct: 606  RSLYWDGYPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKAP 665

Query: 106  DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            D S A  L  + L  C+SL + H SI  L KL  L+L+ CK+L S  +SIH + L+ L L
Sbjct: 666  DFSGAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTL 725

Query: 166  RGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
             GCS LK LP++       S L L G  I+ LP SI+ L+ +    +  CK LE++   I
Sbjct: 726  SGCSKLKKLPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCI 785

Query: 225  FKLQFLES------IRIHRCPNLQ--FLEMPSCNIDGTRSKEQPSSE--------LKLKK 268
            FKL+ L++      +R+ + P +Q     +    +D T  +E PSS         LKLK 
Sbjct: 786  FKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKN 845

Query: 269  CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
            C R  SLP   C   SL +L +  C   ++LPD++G+LQ L +L  +G+ I+E+P  +  
Sbjct: 846  CKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITL 905

Query: 329  LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
            L  L  L L  C                     S   NL               +   P+
Sbjct: 906  LTRLQVLSLAGCKG-----------------GGSKSRNL------------ALSLRASPT 936

Query: 389  SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIR 447
              L+L          SSL +  SL  L + D   LE  LP +L +L  LE L +      
Sbjct: 937  DGLRL----------SSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFI 986

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLP 473
             VP SL++L  L +L ++ C + +SLP
Sbjct: 987  TVPTSLSRLPHLRRLIVEHCKNLQSLP 1013



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 171/559 (30%), Positives = 266/559 (47%), Gaps = 73/559 (13%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C   +S  S     +SL  L +  C   ++LP+  G +  L+ L + GTAI+ LP
Sbjct: 700  LNLEGCKNLKSFLS-SIHLESLQILTLSGCSKLKKLPEVQGAMDNLSELSLKGTAIKGLP 758

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFC 376
              +  L  L+   L+ C  LE +   IFKLKS++++ +SNC  LK  PEI          
Sbjct: 759  LSIEYLNGLALFNLEECKSLESLPGCIFKLKSLKTLILSNCLRLKKLPEIQENMESLKEL 818

Query: 377  NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +D +G+  +PSS+        LKL  C +L SLP S+C   SL +L +  C +L++LPD
Sbjct: 819  FLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPD 878

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            ++G+L+ L +L+  G+GI+EVP S+  L  L  L L  C    S    L +S   +    
Sbjct: 879  DMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSRNLALSLRASP--- 935

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPES 545
                + +RL   +  L  LK L +    + E  +P  L  LS LE L LS NN   +P S
Sbjct: 936  ---TDGLRL-SSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFITVPTS 991

Query: 546  LNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFT 604
            L++L  L  L + +  NL+ +PE   P SS+K  +L  N+   +  +  S+P+S      
Sbjct: 992  LSRLPHLRRLIVEHCKNLQSLPEL--P-SSIK--ELLANDCTSLETF--SYPSSAYPLRK 1044

Query: 605  SLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM----------------YF 648
                + +  NC +L  NE S+ ++   + Q +     I KSM                  
Sbjct: 1045 FGDFNFEFSNCFRLVGNEQSDTVEA--ILQEIRLVASIQKSMAPSEHSARYGESRYDAVV 1102

Query: 649  PGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDDRKC 707
            PG+ IP+WF HQS G +I+++ P P  YN   +G A C V            S+    + 
Sbjct: 1103 PGSRIPEWFTHQSEGDSITVELP-PGCYNTNSIGLAACAVFHPKF-------SMGKIGRS 1154

Query: 708  NLFDVVCDRRSEGY--DSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDR 765
              F V     S G+  D+ TS +  K     +DH++ G  + +G +  +   +  F   +
Sbjct: 1155 AYFSV---NESGGFSLDNTTSMHFSK-----ADHIWFGYRLISGVD-LRDHLKVAFATSK 1205

Query: 766  SCCE-VKKCGIHFVHAQRQ 783
               E VKKCG+  V+ Q +
Sbjct: 1206 VPGEVVKKCGVRLVYEQDE 1224


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 173/552 (31%), Positives = 264/552 (47%), Gaps = 67/552 (12%)

Query: 278  GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLE 336
            G+  F+ L S+++    +  ++PD  G +  L RLI+ G T++ E+   +G L  L  L 
Sbjct: 649  GKKGFEKLKSIKLSHSQHLTKIPDFSG-VPNLRRLILKGCTSLVEVHPSIGALKKLIFLN 707

Query: 337  LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSS 389
            L+ C +L+  SSSI  ++S++ + +S CS LK FPE+       P  +++G+ I+ +P S
Sbjct: 708  LEGCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLS 766

Query: 390  V--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            +        L L +C  LESLP S+   KSL +L +  C +L+ LPD LG+L+ L EL  
Sbjct: 767  IENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSGCSELKDLPDNLGSLQCLTELNA 826

Query: 442  EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
            +G+G++EVP S+  L  L  L L  C   ES    +  S   +  E       +RLP   
Sbjct: 827  DGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEE------LRLPSFS 880

Query: 501  GNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
            G L  L+VL ++   + E  +P  LG + SLE L LS N+   IP SL+ LS L SL L 
Sbjct: 881  G-LYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLE 939

Query: 559  N-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLK 617
               +L+ +PE    + SL       ++   +  +  S       +F  LR   +  NC +
Sbjct: 940  YCKSLQSLPELPSSVESLN-----AHSCTSLETFTCSSSAYTSKKFGDLRF--NFTNCFR 992

Query: 618  LDPNELSEIIKDGWMKQSVNGETYITK---------------SMYFPGNEIPKWFRHQST 662
            L  N+ S+I+  G + + +   + I K               +   PGN IP+WFRHQS 
Sbjct: 993  LGENQGSDIV--GAILEGIQLMSSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSV 1050

Query: 663  GSTISLKTPQPTGYNKLMGFAFCVVV--ACSVSECCRHESVEDDRKCNLFDVVCDRRSEG 720
            G +++++ PQ     KLMG AFC  +    ++      E       C L D  C   +  
Sbjct: 1051 GCSVNIELPQHWYNTKLMGLAFCAALNFKGAMDGNPGTEPSSFGLVCYLND--CFVETGL 1108

Query: 721  YDSYTSSYLGKISHVESDHVFLGSSIFAGENSC------KRSDEFF--FHIDRSCCEVKK 772
            +  YT     K   +ESDH        A    C      K SD     F +  S  EVKK
Sbjct: 1109 HSLYTPPEGSKF--IESDHTLFEYISLARLEICLGNWFRKLSDNVVASFALTGSDGEVKK 1166

Query: 773  CGIHFVHAQRQR 784
            CGI  V+ + ++
Sbjct: 1167 CGIRLVYEEDEK 1178



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 204/458 (44%), Gaps = 75/458 (16%)

Query: 7   EIQINPYTFSKMTELRLLKFCG------------------------------SKNKCMVH 36
           E+  +   F+KM  LRLLK C                               ++NK  ++
Sbjct: 542 ELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLY 601

Query: 37  SLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDL 95
                    LR   WH +PLK+  +  H E LV L M  S++ Q W+  +    LK I L
Sbjct: 602 EDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKL 661

Query: 96  KYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
            +S+ LTK+PD S   NL  L L  C+SL E H SI  L KL  L+L+ CK L S  +SI
Sbjct: 662 SHSQHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI 721

Query: 156 HSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS 213
           H + L+ L L GCS LK  P++     HL   L L G  I+ LP SI+ L+ +  L +  
Sbjct: 722 HMESLQILTLSGCSKLKKFPEVQGNMEHL-PNLSLEGTAIKGLPLSIENLTGLALLNLKE 780

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLE--------MPSCNIDGTRSKEQPSS--- 262
           CK LE++  SIFKL+ L+++ +  C  L+ L         +   N DG+  +E P S   
Sbjct: 781 CKSLESLPRSIFKLKSLKTLILSGCSELKDLPDNLGSLQCLTELNADGSGVQEVPPSITL 840

Query: 263 -----ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
                 L L  C   ES           +  E +  P+F         L +L  LI+   
Sbjct: 841 LTNLQILSLAGCKGGESKSRNMIFSFHSSPTEELRLPSFS-------GLYSLRVLILQRC 893

Query: 318 AIRE--LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            + E  LP  LG +  L +L+L   S +  I +S+  L  + S+ +  C +L+  PE   
Sbjct: 894 NLSEGALPSDLGSIPSLERLDLSRNSFIT-IPASLSGLSRLRSLTLEYCKSLQSLPE--- 949

Query: 376 CNIDGSGIERIPSSVLKLNK--CSKLESLPSSLCMFKS 411
                     +PSSV  LN   C+ LE+   S   + S
Sbjct: 950 ----------LPSSVESLNAHSCTSLETFTCSSSAYTS 977


>gi|168012613|ref|XP_001758996.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689695|gb|EDQ76065.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 666

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 170/536 (31%), Positives = 260/536 (48%), Gaps = 37/536 (6%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL  +D+     LT LP+ L    +L IL++  CSSL      +  
Sbjct: 37  SSLTSLPNELGNLTSLTILDISGCSKLTSLPNELYNLSSLTILNIRNCSSLISLPKELGN 96

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG-- 190
           L  L  LD+ RC +LTSLP  + +   L  L +  CS L  LP      +  T+ ++G  
Sbjct: 97  LTSLTTLDISRCSNLTSLPNELCNLISLTILNISWCSRLTLLPNELDNLISLTILIIGGY 156

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL--------Q 242
             +  LP+ +  L ++  L ++ C  L ++ + +  L  L +  I  C  L         
Sbjct: 157 SSMTSLPNELDDLKSLTTLYMWWCSSLTSLPNKLRNLTSLTTFDISGCSKLISLSNELGN 216

Query: 243 FLEMPSCNIDGTRSKEQPSSEL-------KLKKCPRPE--SLPSGQCMFKSLTSLEIIDC 293
           F+ + + NI+   S     +EL        L  C      SLP     F +LT+L+I +C
Sbjct: 217 FISLTTLNINKCSSLVLLPNELGNLSSLTTLDICEYSSLTSLPKELGNFTTLTTLDICEC 276

Query: 294 PNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            +   LP ELGN  +L    I G   +  LP  L  L  L+  ++   S L  I + +  
Sbjct: 277 SSLISLPKELGNFISLTTFDISGCLNLISLPNELSNLTSLTTFDISVFSNLTSIPNELGN 336

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKS 411
           L S+ + +IS CSNL   P           +  + S + L +  CSKL SLP+ L    S
Sbjct: 337 LTSLITFDISGCSNLTSLPN---------ELGNLTSLTTLNMGNCSKLTSLPNELGDLTS 387

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           LT+L I  C  L  LP E GNL +L  L + E + +  +PK L  L +L+   +  C + 
Sbjct: 388 LTTLNISKCSSLVSLPKEFGNLTSLTTLDICECSSLTSLPKELENLISLTTFDISGCLNL 447

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSS 528
            SLP+ L    SLT+ +I  C N   +P+E+GNL  L    I G + +  +   LG L+S
Sbjct: 448 TSLPNELSNLTSLTTFDISVCSNLTSIPNELGNLTSLITFDISGCSNLTSLSNELGNLTS 507

Query: 529 LEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           L  L + + + L  +P  L+ LSSL +L LS  ++L  +P++LD L+SL  LD+ E
Sbjct: 508 LTTLNMGNCSKLTSLPNELSDLSSLTTLNLSKCSSLVSLPKKLDNLTSLTILDICE 563



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 258/552 (46%), Gaps = 51/552 (9%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL+SL  +++ +   LT LP+ L    +L IL +G  SS+T   + +  
Sbjct: 109 SNLTSLPNELCNLISLTILNISWCSRLTLLPNELDNLISLTILIIGGYSSMTSLPNELDD 168

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L  L +  C SLTSLP  + +   L    + GCS L +L       L + + L  + 
Sbjct: 169 LKSLTTLYMWWCSSLTSLPNKLRNLTSLTTFDISGCSKLISLSN----ELGNFISLTTLN 224

Query: 193 IEE------LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL----- 241
           I +      LP+ +  LS++  L I     L ++   +     L ++ I  C +L     
Sbjct: 225 INKCSSLVLLPNELGNLSSLTTLDICEYSSLTSLPKELGNFTTLTTLDICECSSLISLPK 284

Query: 242 ---QFLEMPSCNIDGTRSKEQPSSELK---------LKKCPRPESLPSGQCMFKSLTSLE 289
               F+ + + +I G  +     +EL          +       S+P+      SL + +
Sbjct: 285 ELGNFISLTTFDISGCLNLISLPNELSNLTSLTTFDISVFSNLTSIPNELGNLTSLITFD 344

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           I  C N   LP+ELGNL +L  L +   + +  LP  LG L  L+ L +  CS L  +  
Sbjct: 345 ISGCSNLTSLPNELGNLTSLTTLNMGNCSKLTSLPNELGDLTSLTTLNISKCSSLVSLPK 404

Query: 349 SIFKLKSVESIEISNCSNLKGFPE-----IPFCNIDGSGIERIPS-----------SVLK 392
               L S+ +++I  CS+L   P+     I     D SG   + S           +   
Sbjct: 405 EFGNLTSLTTLDICECSSLTSLPKELENLISLTTFDISGCLNLTSLPNELSNLTSLTTFD 464

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK 451
           ++ CS L S+P+ L    SL + +I  C  L  L +ELGNL +L  L +   + +  +P 
Sbjct: 465 ISVCSNLTSIPNELGNLTSLITFDISGCSNLTSLSNELGNLTSLTTLNMGNCSKLTSLPN 524

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            L+ L+ L+ L L KCSS  SLP +L    SLT L+I +  +   L  E+GNL  L +L 
Sbjct: 525 ELSDLSSLTTLNLSKCSSLVSLPKKLDNLTSLTILDICESSSLTSLSKELGNLTSLTILN 584

Query: 511 IKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           ++    +  +   +G L SL  L + + ++L ++P+ L  L+SL +L +S  ++L  +P 
Sbjct: 585 MENRLRLISLSNEIGNLISLTTLDICECSSLTLLPKELGNLTSLTTLNISGCSSLISLPN 644

Query: 568 RLDPLSSLKYLD 579
            L  L SL  L+
Sbjct: 645 ELGNLKSLTTLN 656



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 194/389 (49%), Gaps = 36/389 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           L LK+C R   LP+      +L  L I  C +   LP+ELGNL +L  L I G + +  L
Sbjct: 7   LNLKECSRLRLLPTSIKNLLALRKLNIRGCSSLTSLPNELGNLTSLTILDISGCSKLTSL 66

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  L  L+ L+ L ++NCS L  +   +  L S+ +++IS CSNL   P    CN+    
Sbjct: 67  PNELYNLSSLTILNIRNCSSLISLPKELGNLTSLTTLDISRCSNLTSLPN-ELCNLISLT 125

Query: 383 IERI---------PS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           I  I         P+        ++L +   S + SLP+ L   KSLT+L +  C  L  
Sbjct: 126 ILNISWCSRLTLLPNELDNLISLTILIIGGYSSMTSLPNELDDLKSLTTLYMWWCSSLTS 185

Query: 426 LPDELGNLEALEELRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSLT 483
           LP++L NL +L    + G + +  +   L   ++L+ L + KCSS   LP+ L    SLT
Sbjct: 186 LPNKLRNLTSLTTFDISGCSKLISLSNELGNFISLTTLNINKCSSLVLLPNELGNLSSLT 245

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSDN-NLQI 541
           +L+I +  +   LP E+GN   L  L I + +++  +P+ LG   SL    +S   NL  
Sbjct: 246 TLDICEYSSLTSLPKELGNFTTLTTLDICECSSLISLPKELGNFISLTTFDISGCLNLIS 305

Query: 542 IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSI 599
           +P  L+ L+SL +  +S  +NL  IP  L  L+SL   D+   +NL  +P  L       
Sbjct: 306 LPNELSNLTSLTTFDISVFSNLTSIPNELGNLTSLITFDISGCSNLTSLPNEL------- 358

Query: 600 PSEFTSLRLSVDLRNCLKLD--PNELSEI 626
               TSL  ++++ NC KL   PNEL ++
Sbjct: 359 -GNLTSLT-TLNMGNCSKLTSLPNELGDL 385



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 217/472 (45%), Gaps = 33/472 (6%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L +  + G SK+  L +++ N +SL  +++     L  LP+ L    +L  LD+  
Sbjct: 192 NLTSLTTFDISGCSKLISLSNELGNFISLTTLNINKCSSLVLLPNELGNLSSLTTLDICE 251

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTS 179
            SSLT     +     L  LD+  C SL SLP  + +   L    + GC NL +LP   S
Sbjct: 252 YSSLTSLPKELGNFTTLTTLDICECSSLISLPKELGNFISLTTFDISGCLNLISLPNELS 311

Query: 180 CHLRSTLPLLGV--GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
                T   + V   +  +P+ +  L+++    I  C  L ++ + +  L  L ++ +  
Sbjct: 312 NLTSLTTFDISVFSNLTSIPNELGNLTSLITFDISGCSNLTSLPNELGNLTSLTTLNMGN 371

Query: 238 C------PN-------LQFLEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQC 280
           C      PN       L  L +  C+   +  KE       + L + +C    SLP    
Sbjct: 372 CSKLTSLPNELGDLTSLTTLNISKCSSLVSLPKEFGNLTSLTTLDICECSSLTSLPKELE 431

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKN 339
              SLT+ +I  C N   LP+EL NL +L    I   + +  +P  LG L  L   ++  
Sbjct: 432 NLISLTTFDISGCLNLTSLPNELSNLTSLTTFDISVCSNLTSIPNELGNLTSLITFDISG 491

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
           CS L  +S+ +  L S+ ++ + NCS L   P       + S +  +  + L L+KCS L
Sbjct: 492 CSNLTSLSNELGNLTSLTTLNMGNCSKLTSLPN------ELSDLSSL--TTLNLSKCSSL 543

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-A 457
            SLP  L    SLT L+I +   L  L  ELGNL +L  L +E    +  +   +  L +
Sbjct: 544 VSLPKKLDNLTSLTILDICESSSLTSLSKELGNLTSLTILNMENRLRLISLSNEIGNLIS 603

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           L+ L + +CSS   LP  L    SLT+L I  C + + LP+E+GNL+ L  L
Sbjct: 604 LTTLDICECSSLTLLPKELGNLTSLTTLNISGCSSLISLPNELGNLKSLTTL 655



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 148/335 (44%), Gaps = 37/335 (11%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L++  + G S +T L +++ NL SL  +++     LT LP+ L    +L  L++  
Sbjct: 336 NLTSLITFDISGCSNLTSLPNELGNLTSLTTLNMGNCSKLTSLPNELGDLTSLTTLNISK 395

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTS 179
           CSSL         L  L  LD+  C SLTSLP  + +   L    + GC NL +LP   S
Sbjct: 396 CSSLVSLPKEFGNLTSLTTLDICECSSLTSLPKELENLISLTTFDISGCLNLTSLPNELS 455

Query: 180 CHLRSTLPLLGV--GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
                T   + V   +  +P+ +  L+++    I  C  L ++S+ +  L  L ++ +  
Sbjct: 456 NLTSLTTFDISVCSNLTSIPNELGNLTSLITFDISGCSNLTSLSNELGNLTSLTTLNMGN 515

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C  L  L           S     + L L KC    SLP       SLT L+I +  +  
Sbjct: 516 CSKLTSLP-------NELSDLSSLTTLNLSKCSSLVSLPKKLDNLTSLTILDICESSSLT 568

Query: 298 RLPDELGNLQAL------NRL-------------------IIDGTAIRELPEGLGQLALL 332
            L  ELGNL +L      NRL                   I + +++  LP+ LG L  L
Sbjct: 569 SLSKELGNLTSLTILNMENRLRLISLSNEIGNLISLTTLDICECSSLTLLPKELGNLTSL 628

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           + L +  CS L  + + +  LKS+ ++  S CS+L
Sbjct: 629 TTLNISGCSSLISLPNELGNLKSLTTLNKSKCSSL 663


>gi|227438249|gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 211/748 (28%), Positives = 329/748 (43%), Gaps = 156/748 (20%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKT--LNIL 62
            +SE  I    F  MT+LRLL+    +   +  +LE +P +EL++ +W   PLK   LN+L
Sbjct: 468  SSENTIPVEPFVPMTKLRLLQINHVE---LAGNLERLP-SELKWIQWRGCPLKEVPLNLL 523

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNL------VSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
                L  L +  S + +    +Q+L       +LK ++L+    L  +PDLS  + LE L
Sbjct: 524  A-RQLAVLDLAESAIRR----IQSLHIEGVDGNLKVVNLRGCHSLEAVPDLSNHKFLEKL 578

Query: 117  DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP 175
                C  L E  SS+  L  L  LDL  C +LT     +   K L++L L GCS+L  LP
Sbjct: 579  VFERCMRLVEVPSSVGNLRTLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLP 638

Query: 176  K---MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
            +   +  C     L L   GI+ELP SI  L N+ +L + SC+ ++ +   I  L  LE 
Sbjct: 639  ENIGLMPC--LKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSLEE 696

Query: 233  IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
                       L++ S ++                     +SLPS     K+L  L ++ 
Sbjct: 697  -----------LDLSSTSL---------------------QSLPSSIGDLKNLQKLSLMH 724

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C +  ++PD +  L++L +L I G+A+ ELP  LG L  L+      C  L+++ SSI  
Sbjct: 725  CASLSKIPDTIKELKSLKKLFIYGSAVEELPLCLGSLPCLTDFSAGECKLLKHVPSSIGG 784

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
            L S+  +E                 +D + IE +P+ +  L+   K              
Sbjct: 785  LNSLLELE-----------------LDWTPIETLPAEIGDLHFIQK-------------- 813

Query: 413  TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFES 471
              L + +CK L+ LP+ +GN++ L  L + G  I ++P++  +L  L  L++  C   + 
Sbjct: 814  --LGLRNCKSLKALPESIGNMDTLHSLFLTGANIEKLPETFGKLENLDTLRMDNCKMIKR 871

Query: 472  LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI---------KGT----AIRE 518
            LP      KSL  L + +  + + LP+  GNL  L+VL I          GT    +  E
Sbjct: 872  LPESFGDLKSLHDLYMKET-SVVELPESFGNLSNLRVLKILKKPLFRSSPGTSEEPSFVE 930

Query: 519  VPESLGQLSSLE------WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
            VP S   L SLE      W +        +P+ L +LSSL  L+L NN    +P  L+ L
Sbjct: 931  VPNSFSNLLSLEEIDAKGWGIWGK-----VPDDLGKLSSLKKLELGNNYFHSLPSSLEGL 985

Query: 573  SSLKYLDLFENN----LDRIPEYLRS------FPTSIPSEFTSLRL--SVDLRNCLKLDP 620
             +LK   L++      L  +P  L        F     ++ + L +   ++L NC K+D 
Sbjct: 986  WNLKLFTLYDCQELKCLPPLPWKLEKLNLANCFALESIADLSKLEILEELNLTNCGKVDD 1045

Query: 621  -------------------NELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQS 661
                               + LS  +K    K S+     + +++  PGN IP WF   S
Sbjct: 1046 VPGLEHLKALKRLYMSGCNSRLSVAVKKRLSKASLK----MMRNLSLPGNRIPDWF---S 1098

Query: 662  TGSTISLKTPQPTGYNKLMGFAFCVVVA 689
             G      +PQP    +L G    VVVA
Sbjct: 1099 QGPLTF--SPQPN--RELRGVILAVVVA 1122


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 154/469 (32%), Positives = 239/469 (50%), Gaps = 55/469 (11%)

Query: 256  SKEQPSSELKLKKC-PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
            S   P   ++L  C  R + L  G+  F+ L S+++    +  + PD  G +  L RLI+
Sbjct: 632  SNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSG-VPNLRRLIL 690

Query: 315  DG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
             G T++ E+   +G L  L  L L+ C +L+  SSSI  ++S++ + +S CS LK FPE+
Sbjct: 691  KGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEV 749

Query: 374  -------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEII 418
                   P  +++G+ I+ +P S+        L L +C  LESLP S+   KSL +L + 
Sbjct: 750  QGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLTLC 809

Query: 419  DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
             C +L+ LPD+LG+L+ L EL  +G+GI+EVP S+  L  L KL L  C   +S    + 
Sbjct: 810  GCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMV 869

Query: 478  VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLS 535
             S   +  E       +RLP   G L  L+VL ++   + E  +P  LG + SLE L LS
Sbjct: 870  FSFHSSPTEE------LRLPSFSG-LYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLS 922

Query: 536  DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
             N+   IP SL+ LS L SL L    +L+ +PE    + SL       ++   +  +  S
Sbjct: 923  RNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLN-----AHSCTSLETFSCS 977

Query: 595  FPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK---------- 644
                   +F  LR   +  NC +L  N+ S+I+  G + + +   + I K          
Sbjct: 978  SGAYTSKKFGDLRF--NFTNCFRLGENQGSDIV--GAILEGIQLMSSIPKFLVPWGIPTP 1033

Query: 645  ----SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVV 688
                +   PG+ IP+WFRHQS G +++++ P P  YN KLMG AFC  +
Sbjct: 1034 HNEYNALVPGSRIPEWFRHQSVGCSVNIELP-PHWYNTKLMGLAFCAAL 1081



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 205/458 (44%), Gaps = 75/458 (16%)

Query: 7   EIQINPYTFSKMTELRLLKFCG------------------------------SKNKCMVH 36
           E+  +   F+KM  LRLLK C                               ++NK  ++
Sbjct: 548 ELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLY 607

Query: 37  SLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDL 95
                    LR   WH +PLK+  +  H E LV L M  S++ QLW+  +    LK I L
Sbjct: 608 EDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKL 667

Query: 96  KYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
            +S+ LTK PD S   NL  L L  C+SL E H SI  L KL  L+L+ CK L S  +SI
Sbjct: 668 SHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI 727

Query: 156 HSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS 213
           H + L+ L L GCS LK  P++     HL   L L G  I+ LP SI+ L+ +  L +  
Sbjct: 728 HMESLQILTLSGCSKLKKFPEVQGNMEHL-PNLSLEGTAIKGLPLSIENLTGLALLNLKE 786

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLE--------MPSCNIDGTRSKEQPSS--- 262
           CK LE++  SIFKL+ L+++ +  C  L+ L         +   N DG+  +E P S   
Sbjct: 787 CKSLESLPRSIFKLKSLKTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITL 846

Query: 263 -----ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
                +L L  C   +S           +  E +  P+F         L +L  LI+   
Sbjct: 847 LTNLQKLSLAGCKGGDSKSRNMVFSFHSSPTEELRLPSFS-------GLYSLRVLILQRC 899

Query: 318 AIRE--LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            + E  LP  LG +  L +L+L   S +  I +S+  L  + S+ +  C +L+  PE   
Sbjct: 900 NLSEGALPSDLGSIPSLERLDLSRNSFIT-IPASLSGLSRLRSLTLEYCKSLQSLPE--- 955

Query: 376 CNIDGSGIERIPSSVLKLNK--CSKLESLPSSLCMFKS 411
                     +PSSV  LN   C+ LE+   S   + S
Sbjct: 956 ----------LPSSVESLNAHSCTSLETFSCSSGAYTS 983


>gi|168005435|ref|XP_001755416.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693544|gb|EDQ79896.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 624

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 174/564 (30%), Positives = 259/564 (45%), Gaps = 37/564 (6%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           ++T L  ++ NL SL   D+     LT LP +L     L  L +  C++LT     +  L
Sbjct: 11  RLTSLPKELNNLKSLTTFDISGCMNLTSLPKELGNLTTLTSLYMSGCANLTSLPKELGNL 70

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
             L   D++RC++LTSLP  + +   L +  +  C NL +LPK    +L +   L   G 
Sbjct: 71  TSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELG-NLTTLTVLYMSGC 129

Query: 194 EE---LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           E    LP  +  L+ +  L I  C+ L ++   +  L  L    +  C NL  L     N
Sbjct: 130 ENLTSLPKELGNLTTLTSLYISGCENLTSLPKELGNLTSLTIFYMSYCKNLTSLPKELGN 189

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +    S         +  C    SLP       SLT   +  C N   LP  LGNL +L 
Sbjct: 190 LTSLTS-------FNMSYCKNMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNLTSLT 242

Query: 311 RLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
              +     +  LP+ LG L  L+   +  C  L  +   +  L S+ S  IS C NL  
Sbjct: 243 SFNMSYCKNMTSLPKELGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTS 302

Query: 370 FPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            P+          +  + S +   + +C  L SLP  L    SLT   +  CK L  LP+
Sbjct: 303 LPK---------ELGNLTSLTTFDIERCENLTSLPKELGNLTSLTIFNMSRCKNLTSLPE 353

Query: 429 ELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           ELGNL +L +  +E    +  +PK L  + +L+ L +  C++  SLP  L    SL SL 
Sbjct: 354 ELGNLTSLTKFYIERCENLTSLPKELDNITSLTLLCMSGCANLTSLPKELGNLTSLISLY 413

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPE 544
           +  C N   LP E+GNL  LK+  +     +  +P+ LG L+SL  L +S   NL  +P+
Sbjct: 414 MSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTSLTSLYMSRCANLTSLPK 473

Query: 545 SLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSE 602
            L  L+SL+SL +S   NL  +P+ L  L+SLK  D+ +  NL  +P+ L +  T     
Sbjct: 474 ELGNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTT----- 528

Query: 603 FTSLRLSVDLRNCLKLDPNELSEI 626
            TSL +S  +   L L P ELS +
Sbjct: 529 LTSLYMSGCVN--LTLLPKELSNL 550



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 225/477 (47%), Gaps = 55/477 (11%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYL 134
            +T L  ++ NL SL   ++ Y K +T LP +L    +L I  + YC +LT     +  L
Sbjct: 179 NLTSLPKELGNLTSLTSFNMSYCKNMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNL 238

Query: 135 NKLEVLDLDRCKSLTSLP------TSIHSKYLKRLVLRGCSNLKNLPK-------MTSCH 181
             L   ++  CK++TSLP      TS+ + Y+ R     C NL +LPK       +TS H
Sbjct: 239 TSLTSFNMSYCKNMTSLPKELGNLTSLTTFYMNR-----CKNLTSLPKELVNLTSLTSFH 293

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH---RC 238
           +         G E L S  K L N+  L  +  +R EN++S   +L  L S+ I    RC
Sbjct: 294 IS--------GCENLTSLPKELGNLTSLTTFDIERCENLTSLPKELGNLTSLTIFNMSRC 345

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            NL  L     N+          ++  +++C    SLP       SLT L +  C N   
Sbjct: 346 KNLTSLPEELGNLTSL-------TKFYIERCENLTSLPKELDNITSLTLLCMSGCANLTS 398

Query: 299 LPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           LP ELGNL +L  L + G A +  LP+ LG L  L   ++  C  L  +   +  L S+ 
Sbjct: 399 LPKELGNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTSLT 458

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
           S+ +S C+NL   P+      +   +  + S  L ++ C+ L SLP  L    +LTSL+I
Sbjct: 459 SLYMSRCANLTSLPK------ELGNLTSLIS--LYMSGCANLTSLPKEL---GNLTSLKI 507

Query: 418 ID---CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESL 472
            D   C+ L  LP ELGNL  L  L + G   +  +PK L+ L +L+   +++C +  SL
Sbjct: 508 FDMSWCENLTSLPKELGNLTTLTSLYMSGCVNLTLLPKELSNLTSLTTFDIERCENLTSL 567

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSS 528
           P  L    SLT   +  CKN   L  E+GNL  L    I G   +  +P+ LG L S
Sbjct: 568 PKELGNLTSLTKFNMSRCKNLTLLSKELGNLTSLTSFHISGCENLTSLPKELGNLIS 624



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 165/560 (29%), Positives = 246/560 (43%), Gaps = 56/560 (10%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           ++ L +  C  LT     +  L  L   D+  C +LTSLP  + +   L  L + GC+NL
Sbjct: 1   MQWLSIKGCDRLTSLPKELNNLKSLTTFDISGCMNLTSLPKELGNLTTLTSLYMSGCANL 60

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEE------LPSSIKCLSNIGELLIYSCKRLENISSSIF 225
            +LPK     L +   L    IE       LP  +  L+++ +  +  CK L ++   + 
Sbjct: 61  TSLPK----ELGNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELG 116

Query: 226 KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
            L  L  + +  C NL  L     N+    S       L +  C    SLP       SL
Sbjct: 117 NLTTLTVLYMSGCENLTSLPKELGNLTTLTS-------LYISGCENLTSLPKELGNLTSL 169

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELE 344
           T   +  C N   LP ELGNL +L    +     +  LP+ LG L  L+   +  C  L 
Sbjct: 170 TIFYMSYCKNLTSLPKELGNLTSLTSFNMSYCKNMTSLPKELGNLTSLTIFYMSYCKNLT 229

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLP 403
            +   +  L S+ S  +S C N+   P+          +  + S +   +N+C  L SLP
Sbjct: 230 SLPKGLGNLTSLTSFNMSYCKNMTSLPK---------ELGNLTSLTTFYMNRCKNLTSLP 280

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKL 461
             L    SLTS  I  C+ L  LP ELGNL +L    +E    +  +PK L  L +L+  
Sbjct: 281 KELVNLTSLTSFHISGCENLTSLPKELGNLTSLTTFDIERCENLTSLPKELGNLTSLTIF 340

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVP 520
            + +C +  SLP  L    SLT   I  C+N   LP E+ N+  L +L + G A +  +P
Sbjct: 341 NMSRCKNLTSLPEELGNLTSLTKFYIERCENLTSLPKELDNITSLTLLCMSGCANLTSLP 400

Query: 521 ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYL 578
           + LG L+SL  L +S   NL  +P+ L  L+SL    +S   NL  +P+ L  L+SL  L
Sbjct: 401 KELGNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTSLTSL 460

Query: 579 DLFE-NNLDRIPEYLRSFP-------------TSIPSE---FTSLRLSVDLRNCLKLD-- 619
            +    NL  +P+ L +               TS+P E    TSL++  D+  C  L   
Sbjct: 461 YMSRCANLTSLPKELGNLTSLISLYMSGCANLTSLPKELGNLTSLKI-FDMSWCENLTSL 519

Query: 620 PNELSEI--IKDGWMKQSVN 637
           P EL  +  +   +M   VN
Sbjct: 520 PKELGNLTTLTSLYMSGCVN 539



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 187/441 (42%), Gaps = 54/441 (12%)

Query: 63  HWENLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGY 120
           +  +L S  M   K +T L  ++ NL SL    + Y K LT LP  L    +L   ++ Y
Sbjct: 189 NLTSLTSFNMSYCKNMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNLTSLTSFNMSY 248

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNLKNLPKMTS 179
           C ++T     +  L  L    ++RCK+LTSLP   ++   L    + GC NL +LPK   
Sbjct: 249 CKNMTSLPKELGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTSLPK--- 305

Query: 180 CHLRSTLPLLGVGIE---ELPSSIKCLSNIGELLIYS---CKRLENISSSIFKLQFLESI 233
             L +   L    IE    L S  K L N+  L I++   CK L ++   +  L  L   
Sbjct: 306 -ELGNLTSLTTFDIERCENLTSLPKELGNLTSLTIFNMSRCKNLTSLPEELGNLTSLTKF 364

Query: 234 RIHRCPNLQ-------------FLEMPSCNIDGTRSKEQPS----SELKLKKCPRPESLP 276
            I RC NL               L M  C    +  KE  +      L +  C    SLP
Sbjct: 365 YIERCENLTSLPKELDNITSLTLLCMSGCANLTSLPKELGNLTSLISLYMSGCANLTSLP 424

Query: 277 SGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALL 332
                  +LTSL+I D   C N   LP ELGNL +L  L +   A +  LP+ LG L  L
Sbjct: 425 KE---LGNLTSLKIFDMSWCENLTSLPKELGNLTSLTSLYMSRCANLTSLPKELGNLTSL 481

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNIDGSG---IE 384
             L +  C+ L  +   +  L S++  ++S C NL   P+         ++  SG   + 
Sbjct: 482 ISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTTLTSLYMSGCVNLT 541

Query: 385 RIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
            +P         +   + +C  L SLP  L    SLT   +  CK L  L  ELGNL +L
Sbjct: 542 LLPKELSNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTLLSKELGNLTSL 601

Query: 437 EELRVEGT-GIREVPKSLAQL 456
               + G   +  +PK L  L
Sbjct: 602 TSFHISGCENLTSLPKELGNL 622


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1981

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 226/816 (27%), Positives = 357/816 (43%), Gaps = 184/816 (22%)

Query: 1    MSKINSEI-QINPYTFSKMTELRLLKFCG---------------SKNKCM----VHSLEG 40
            +SK   E+  I+     +M+ L+ ++F G               S N C     V++L+ 
Sbjct: 554  LSKNGEEVTNISEKGLQRMSNLQFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQD 613

Query: 41   V--PFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKY 97
            +   F E+R   W  F    L +  + E LV L MP S    LW+  + L +LK +DL Y
Sbjct: 614  LNYQFQEIRLLHWINFRRLCLPSTFNPEFLVELNMPSSTCHTLWEGSKALRNLKWMDLSY 673

Query: 98   SKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPT-SIH 156
            S  L +LPDLS A NLE L L YC SL +  S +  L KL+VL L  C S+  LP+ + +
Sbjct: 674  SISLKELPDLSTATNLEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKN 733

Query: 157  SKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
               L+ L L  CS+L  LP      +    L L  + + +LP SI   +N+ + ++  C 
Sbjct: 734  VTGLQSLDLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGC- 792

Query: 216  RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLK 267
                  SS+ +L F+ +       NLQ L++ +C    +   E PSS         L L 
Sbjct: 793  ------SSLVELPFMGN-----ATNLQNLDLGNC----SSLVELPSSIGNAINLQNLDLS 837

Query: 268  KCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TAIRELP 323
             C     LPS      + T+LEI+D   C +   +P  +G++  L RL + G +++ ELP
Sbjct: 838  NCSSLVKLPS---FIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELP 894

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----------EI 373
              +G ++ L  L L NCS L  + SS     ++  +++S CS+L   P          E+
Sbjct: 895  SSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIGNITNLQEL 954

Query: 374  PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              CN   S + ++PSS+        L L +C KLE+LPS++ + KSL  L++ DC + + 
Sbjct: 955  NLCNC--SNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNINL-KSLERLDLTDCSQFKS 1011

Query: 426  LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
             P+   N+E    L ++GT + EVP S+   + S+L +   S FE L             
Sbjct: 1012 FPEISTNIEC---LYLDGTAVEEVPSSIK--SWSRLTVLHMSYFEKL------------- 1053

Query: 486  EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
                 K F  + D I  LE+       G  I+EV   + ++S L  L L       +L  
Sbjct: 1054 -----KEFSHVLDIITWLEF-------GEDIQEVAPWIKEISRLHGLRLYKCRKLLSLPQ 1101

Query: 542  IPESLNQLS-----SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            +PESL+ ++     SL +L  S NN         PLS L +   F+ N     +  R F 
Sbjct: 1102 LPESLSIINAEGCESLETLDCSYNN---------PLSLLNFAKCFKLN-----QEARDFI 1147

Query: 597  TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
              IP+                                         +     PG E+P +
Sbjct: 1148 IQIPT-----------------------------------------SNDAVLPGAEVPAY 1166

Query: 657  FRHQS-TGSTISLK-TPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVC 714
            F H++ TG+++++K   +P   +  M F  C+V+       C ++   DD    +  V  
Sbjct: 1167 FTHRATTGASLTIKLNERPISTS--MRFKACIVLI-----KCDNDEAGDDGSSLMVHVDI 1219

Query: 715  DRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGE 750
              +  G     S  +  I  + ++H++    IF GE
Sbjct: 1220 MDKQNGLSVPYSPGIYTIYPLLTEHLY----IFQGE 1251



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 7/175 (4%)

Query: 6    SEIQINPYTFSKMTELRLLKF-CGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL-NI 61
             E+ I+   F  M+ L+ L+  C   +K  ++   G+ +   +LR  EW +FPL  L + 
Sbjct: 1783 GELNISERAFEGMSNLKFLRIKCDRSDK--MYLPRGLKYISRKLRLLEWDRFPLTCLPSN 1840

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
               E LV L M  SK+ +LW+   +L +LK ++L +SK L +LPD S A NL+ L L  C
Sbjct: 1841 FCTEYLVELNMRHSKLVKLWEGNLSLGNLKWMNLFHSKNLKELPDFSTATNLQTLILCGC 1900

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP 175
            SSL E   SI   N L+ L L RC SL  LP SI + + L+ + L+GCS L+ +P
Sbjct: 1901 SSLVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCSKLEVVP 1955



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 5/123 (4%)

Query: 399  LESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            L  LPS+ C  + L  L +   K  KL      LGNL+ +         ++E+P      
Sbjct: 1834 LTCLPSNFCT-EYLVELNMRHSKLVKLWEGNLSLGNLKWMNLFH--SKNLKELPDFSTAT 1890

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
             L  L L  CSS   LP  +  + +L  L +  C + + LP  IGNL  L+ +T+KG + 
Sbjct: 1891 NLQTLILCGCSSLVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTLKGCSK 1950

Query: 517  REV 519
             EV
Sbjct: 1951 LEV 1953


>gi|168033675|ref|XP_001769340.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679446|gb|EDQ65894.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 524

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 174/532 (32%), Positives = 269/532 (50%), Gaps = 36/532 (6%)

Query: 72  MPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHS 129
           M G S +T L +++ NL SL+ + L     LT LP+ L+   +L ILDL  CSSLT   +
Sbjct: 1   MSGFSSLTSLPNELVNLSSLEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPN 60

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLP 187
            +  L+ L +LDL  C SLTSL   + +   L  L L GCS+L +LP ++T+      L 
Sbjct: 61  ELANLSSLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELV 120

Query: 188 LLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
           L G   +  LP+ +  LS++  L +  C  L ++ + +  L FL  + +  C     + +
Sbjct: 121 LSGCSSLTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFLTILDLSGC--FSLISL 178

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           P+  +    S E     L L  C    SLP+      SL +L +I C +   LP+EL NL
Sbjct: 179 PN-ELANLSSLEV----LVLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANL 233

Query: 307 QALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +L  L++ G +++  L   L  L+ L +L L  C  L  + + +  L S++ + +S CS
Sbjct: 234 SSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNELANLYSLKFLVLSGCS 293

Query: 366 NLKGFPEIPFCNIDG---------SGIERIPSSV--------LKLNKCSKLESLPSSLCM 408
           +L   P     N+           S +  +P+ +        L L+ CS L SLP+ L  
Sbjct: 294 SLTSLPN-ELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLSGCSSLISLPNELTN 352

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKC 466
             SL  L++  C  L  LP+EL NL +L  L + G + ++ +P  LA L+ L++L L  C
Sbjct: 353 LSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCSSLKSLPNELANLSYLTRLNLSGC 412

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQ 525
           S   SLP+ L     LT L++  C +   LP+E+ NL +L  L + G +++  +P  L  
Sbjct: 413 SCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFLTTLDLSGCSSLTSLPNELAN 472

Query: 526 LSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN-NLERIPERLDPLSSL 575
           LSSL+ L L+  ++L I+P  L  LS L  L LS   +L  +P  L  LSSL
Sbjct: 473 LSSLKMLDLNGCSSLIILPNELANLSFLTRLNLSGCLSLISLPNELANLSSL 524



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 167/490 (34%), Positives = 246/490 (50%), Gaps = 25/490 (5%)

Query: 101 LTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
           LT LP+ L    +LE L L  C SLT   + +  L+ L +LDL  C SLTSLP  + +  
Sbjct: 7   LTSLPNELVNLSSLEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPNELANLS 66

Query: 159 YLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKR 216
            L  L L GCS+L +L  ++ +    +TL L G   +  LP+ +  LS + EL++  C  
Sbjct: 67  SLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGCSS 126

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L ++ + +  L  L+ + ++ C NL  L     N+          + L L  C    SLP
Sbjct: 127 LTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFL-------TILDLSGCFSLISLP 179

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           +      SL  L +  C +   LP+EL NL +L  L + G +++  LP  L  L+ L +L
Sbjct: 180 NELANLSSLEVLVLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLEEL 239

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
            L  CS L  +S+ +  L S+  + +S C +L   P       + + +  +    L L+ 
Sbjct: 240 VLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPN------ELANLYSLK--FLVLSG 291

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLA 454
           CS L SLP+ L    SL  L +     L  LP+EL NL +LEEL + G + +  +P  L 
Sbjct: 292 CSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLSGCSSLISLPNELT 351

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L +L  L L  CSS  SLP+ L    SLT L++  C +   LP+E+ NL YL  L + G
Sbjct: 352 NLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCSSLKSLPNELANLSYLTRLNLSG 411

Query: 514 -TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLD 570
            + +  +P  L  LS L  L LS  ++L  +P  L  LS L +L LS  ++L  +P  L 
Sbjct: 412 CSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFLTTLDLSGCSSLTSLPNELA 471

Query: 571 PLSSLKYLDL 580
            LSSLK LDL
Sbjct: 472 NLSSLKMLDL 481



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 202/403 (50%), Gaps = 40/403 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           L L  C    SLP+      SLT L++  C +   L +EL NL +L  L + G +++  L
Sbjct: 47  LDLSGCSSLTSLPNELANLSSLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISL 106

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNI 378
           P  L  L+ L +L L  CS L  + + +  L S++ ++++ CSNL   P     + F  I
Sbjct: 107 PNELTNLSFLEELVLSGCSSLTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFLTI 166

Query: 379 -DGSGIERIPS-----------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
            D SG   + S            VL L+ CS L SLP+ L    SL +L +I C  L  L
Sbjct: 167 LDLSGCFSLISLPNELANLSSLEVLVLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSL 226

Query: 427 PDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           P+EL NL +LEEL + G + +  +   LA L +L +L L  C S  SLP+ L    SL  
Sbjct: 227 PNELANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNELANLYSLKF 286

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQII 542
           L +  C +   LP+E+ NL  L+ L + G +++  +P  L  LSSLE LVLS  ++L  +
Sbjct: 287 LVLSGCSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLSGCSSLISL 346

Query: 543 PESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFP---- 596
           P  L  LSSL  L L+  ++L  +P  L  LSSL  LDL   ++L  +P  L +      
Sbjct: 347 PNELTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCSSLKSLPNELANLSYLTR 406

Query: 597 ---------TSIPSEFTSLRL--SVDLRNCLKLD--PNELSEI 626
                    TS+P+E  +L     +DL  C  L   PNEL+ +
Sbjct: 407 LNLSGCSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNL 449


>gi|110742215|dbj|BAE99034.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 826

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 199/772 (25%), Positives = 343/772 (44%), Gaps = 140/772 (18%)

Query: 35  VHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
           V   +G+ +  ++LR   W+  PLK L+     E LV L+M  S + +LWD  Q L  LK
Sbjct: 152 VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 211

Query: 92  RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
           ++ L+ SK L ++PDLSLA NLE +D+  C SL    SS+Q   KL  LD+  CK L S 
Sbjct: 212 QMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESF 271

Query: 152 PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
           PT ++ + L+ L L GC NL+N P +           +G    + P          E+++
Sbjct: 272 PTDLNLESLEYLNLTGCPNLRNFPAIK----------MGCSDVDFPEGR------NEIVV 315

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCP 270
             C   +N+ +    L +L+ +   RC   +F               +P   + L  +C 
Sbjct: 316 EDCFWNKNLPAG---LDYLDCL--MRCMPCEF---------------RPEYLVFLNVRCY 355

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
           + E L  G     SL  +++ +  N   +PD L     L  L ++   ++  LP  +G L
Sbjct: 356 KHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCKSLVTLPSTIGNL 414

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIER 385
             L +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  ++ + IE 
Sbjct: 415 QKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEE 473

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
               +L L+K +KLE             SL + +CK L  LP  +GNL+ L         
Sbjct: 474 ----ILDLSKATKLE-------------SLILNNCKSLVTLPSTIGNLQNLR-------- 508

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
                         +L +K+C+  E LP+ + +S SL  L++  C +    P    N+ +
Sbjct: 509 --------------RLYMKRCTGLEVLPTDVNLS-SLGILDLSGCSSLRTFPLISTNIVW 553

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVL-SDNNLQIIPESLNQLSSLVSLKLSN----- 559
           L    ++ TAI EVP  +   + L  L++     L+ I  ++ +L SL+    ++     
Sbjct: 554 L---YLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCRGVI 610

Query: 560 ---NNLERIPERLDPLSSLKYLDLFENNLDRI-PEYLRSFPTSIPSEFTSLRLSVDLRNC 615
              ++   +    D +S +   +  E   +R   E        + +E+ S R      NC
Sbjct: 611 KALSDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSFR------NC 664

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
            KLD +    I++  +            K +  PG EIPK+F +++ G ++++  P+ + 
Sbjct: 665 FKLDRDARELILRSCF------------KPVALPGGEIPKYFTYRAYGDSLTVTLPRSSL 712

Query: 676 YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYL--GKIS 733
               + F  C+VV         +  +E +   N               Y  S+L   ++ 
Sbjct: 713 SQSFLRFKACLVVDPLSEGKGFYRYLEVNFGFN------------GKQYQKSFLEDEELE 760

Query: 734 HVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCC--EVKKCGIHFVHAQRQ 783
             ++DH+F  S  F  E +     EF F     CC   +K+CG+  ++  ++
Sbjct: 761 FCKTDHLFFCSFKFESEMTFNDV-EFKF-----CCSNRIKECGVRLMYVSQE 806


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 174/576 (30%), Positives = 260/576 (45%), Gaps = 98/576 (17%)

Query: 76   KVTQLWD--DVQNLVS-------LKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
            K ++LWD  D+ +  S       LK IDL  SK L K+P  S   NLE L+L  C SL E
Sbjct: 511  KWSRLWDVDDIYDAFSKQERLEELKGIDLSNSKQLVKMPKFSSMSNLERLNLEGCISLRE 570

Query: 127  THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM-TSCHLRST 185
             H SI  L  L  L+L  C+ L S  +S+  + L+ L L  C NLK  P++  +      
Sbjct: 571  LHPSIGDLKSLTYLNLGGCEQLRSFLSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKE 630

Query: 186  LPLLGVGIEELPSSIKCLSNIGELLIYSCKR-----------------------LENISS 222
            L L   GI+ LPSSI  L+++  L +  C                         ++ + S
Sbjct: 631  LYLNKSGIQALPSSIVYLASLEVLNLSYCSNFKKFPEIHGNMECLKELYFNRSGIQELPS 690

Query: 223  SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS----- 277
            SI  L  LE + +  C N +       N+   R       EL L++C + E  P      
Sbjct: 691  SIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLR-------ELYLERCSKFEKFPDTFTYM 743

Query: 278  ----GQCMFKS-----------LTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAI 319
                G  + +S           L SLEI+D   C  FE+ P+  GN++ L  L +D TAI
Sbjct: 744  GHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAI 803

Query: 320  RELPEGLGQLALLSKLELKNCSELEYIS-----------------------SSIFKLKSV 356
            +ELP  +G L  L  L L+ CS+ E  S                        SI  L+S+
Sbjct: 804  KELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESL 863

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
            E + +  CSN + FPEI   N+    +  +  + +K         LP+ +   ++L  L+
Sbjct: 864  EELNLRYCSNFEKFPEIQ-GNMKCLKMLCLEDTAIK--------ELPNGIGRLQALEILD 914

Query: 417  IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
            +  C  LER P+   N+  L  L ++ T IR +P S+  L  L +L L+ C + +SLP+ 
Sbjct: 915  LSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNS 974

Query: 476  LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
            +   KSL  L +  C N     +   ++E L+ L +  T I E+P S+  L  L+ L L 
Sbjct: 975  ICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELI 1034

Query: 536  D-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
            +  NL  +P S+  L+ L SL + N   L  +P+ L
Sbjct: 1035 NCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1070



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 200/449 (44%), Gaps = 87/449 (19%)

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC--S 122
            E L  L +  S +  L   +  L SL+ ++L Y     K P++    N+E L   Y   S
Sbjct: 626  ECLKELYLNKSGIQALPSSIVYLASLEVLNLSYCSNFKKFPEIH--GNMECLKELYFNRS 683

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--KYLKRLVLRGCSNLKNLPKMTS- 179
             + E  SSI YL  LEVL+L  C +    P  IH   K+L+ L L  CS  +  P   + 
Sbjct: 684  GIQELPSSIVYLASLEVLNLSDCSNFEKFP-EIHGNMKFLRELYLERCSKFEKFPDTFTY 742

Query: 180  -CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-----FLESI 233
              HLR  L L   GI+ELPSSI  L ++  L +  C + E        ++     FL+  
Sbjct: 743  MGHLRG-LHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDET 801

Query: 234  RIHRCPN-------LQFLEMPSCN-------------------IDGTRSKEQPSS----- 262
             I   PN       L+ L +  C+                   + G+  KE P S     
Sbjct: 802  AIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLE 861

Query: 263  ---ELKLKKCPRPESLPSGQCMFK--------------------SLTSLEIID---CPNF 296
               EL L+ C   E  P  Q   K                     L +LEI+D   C N 
Sbjct: 862  SLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNL 921

Query: 297  ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            ER P+   N+  L  L +D TAIR LP  +G L  L +L+L+NC  L+ + +SI  LKS+
Sbjct: 922  ERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSL 981

Query: 357  ESIEISNCSNLKGFPEIP--FCNIDG-----SGIERIPSSV--------LKLNKCSKLES 401
            + + ++ CSNL+ F EI      ++G     +GI  +PSS+        L+L  C  L +
Sbjct: 982  KGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVA 1041

Query: 402  LPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            LP+S+     LTSL + +C KL  LPD L
Sbjct: 1042 LPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1070



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 185/419 (44%), Gaps = 86/419 (20%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L  C +  S  S    F+SL  L +  CPN ++ P+  GN++ L  L ++ + I+ LP
Sbjct: 584 LNLGGCEQLRSFLSSM-KFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNKSGIQALP 642

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------C 376
                                   SSI  L S+E + +S CSN K FPEI          
Sbjct: 643 ------------------------SSIVYLASLEVLNLSYCSNFKKFPEIHGNMECLKEL 678

Query: 377 NIDGSGIERIPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             + SGI+ +PSS        VL L+ CS  E  P      K L  L +  C K E+ PD
Sbjct: 679 YFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLERCSKFEKFPD 738

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS---------RLYV 478
               +  L  L +  +GI+E+P S+  L +L  L L  CS FE  P           L++
Sbjct: 739 TFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFL 798

Query: 479 SK-----------SLTSLEII---DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            +           SLTSLE++   +C  F +  D   N+  L+ L + G+ I+E+P S+G
Sbjct: 799 DETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIG 858

Query: 525 QLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE- 582
            L SLE L L   +N +  PE    +  L  L L +  ++ +P  +  L +L+ LDL   
Sbjct: 859 YLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGC 918

Query: 583 NNLDRIPEY----------------LRSFPTSIPSEFTSLRLSVDLRNC--LKLDPNEL 623
           +NL+R PE                 +R  P S+    T L   +DL NC  LK  PN +
Sbjct: 919 SNLERFPEIQKNMGNLWGLFLDETAIRGLPYSV-GHLTRLE-RLDLENCRNLKSLPNSI 975



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 62/356 (17%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCM------VHSLEGVPFTELRYFEWHQFPLKTL 59
            S+ +  P TF+ M  LR L    S  K +      + SLE +  +    FE  +FP    
Sbjct: 731  SKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFE--KFPEIQG 788

Query: 60   NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL-SLAQNLEILDL 118
            N+   + L++L +  + + +L + + +L SL+ + L+      K  D+ +    L  L L
Sbjct: 789  NM---KCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCL 845

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP----------------TSIHS----- 157
             Y S + E   SI YL  LE L+L  C +    P                T+I       
Sbjct: 846  -YGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGI 904

Query: 158  ---KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE-----LPSSIKCLSNIGEL 209
               + L+ L L GCSNL+  P++     ++   L G+ ++E     LP S+  L+ +  L
Sbjct: 905  GRLQALEILDLSGCSNLERFPEIQ----KNMGNLWGLFLDETAIRGLPYSVGHLTRLERL 960

Query: 210  LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ-FLEMPSC--NIDG-----TRSKEQPS 261
             + +C+ L+++ +SI  L+ L+ + ++ C NL+ FLE+      ++G     T   E PS
Sbjct: 961  DLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPS 1020

Query: 262  S--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
            S         L+L  C    +LP+       LTSL + +CP    LPD L + Q +
Sbjct: 1021 SIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSQQCI 1076


>gi|30683870|ref|NP_193428.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658426|gb|AEE83826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1449

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 200/772 (25%), Positives = 343/772 (44%), Gaps = 140/772 (18%)

Query: 35   VHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
            V   +G+ +  ++LR   W+  PLK L+     E LV L+M  S + +LWD  Q L  LK
Sbjct: 700  VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 759

Query: 92   RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
            ++ L+ SK L ++PDLSLA NLE +D+  C SL    SS+Q   KL  LD+  CK L S 
Sbjct: 760  QMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESF 819

Query: 152  PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
            PT ++ + L+ L L GC NL+N P +           +G    + P          E+++
Sbjct: 820  PTDLNLESLEYLNLTGCPNLRNFPAIK----------MGCSDVDFPEGRN------EIVV 863

Query: 212  YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCP 270
              C   +N+ +    L +L+ +   RC   +F               +P   + L  +C 
Sbjct: 864  EDCFWNKNLPAG---LDYLDCL--MRCMPCEF---------------RPEYLVFLNVRCY 903

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
            + E L  G     SL  +++ +  N   +PD L     L  L ++   ++  LP  +G L
Sbjct: 904  KHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCKSLVTLPSTIGNL 962

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIER 385
              L +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  ++ + IE 
Sbjct: 963  QKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEE 1021

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
            I    L L+K +KLE             SL + +CK L  LP  +GNL+ L         
Sbjct: 1022 I----LDLSKATKLE-------------SLILNNCKSLVTLPSTIGNLQNLR-------- 1056

Query: 446  IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
                          +L +K+C+  E LP+ + +S SL  L++  C +    P    N+ +
Sbjct: 1057 --------------RLYMKRCTGLEVLPTDVNLS-SLGILDLSGCSSLRTFPLISTNIVW 1101

Query: 506  LKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN----- 559
            L    ++ TAI EVP  +   + L  L++     L+ I  ++ +L SL+    ++     
Sbjct: 1102 L---YLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCRGVI 1158

Query: 560  ---NNLERIPERLDPLSSLKYLDLFENNLDRI-PEYLRSFPTSIPSEFTSLRLSVDLRNC 615
               ++   +    D +S +   +  E   +R   E        + +E+ S R      NC
Sbjct: 1159 KALSDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSFR------NC 1212

Query: 616  LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
             KLD +    I++  +            K +  PG EIPK+F +++ G ++++  P+ + 
Sbjct: 1213 FKLDRDARELILRSCF------------KPVALPGGEIPKYFTYRAYGDSLTVTLPRSSL 1260

Query: 676  YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYL--GKIS 733
                + F  C+VV         +  +E +   N               Y  S+L   ++ 
Sbjct: 1261 SQSFLRFKACLVVDPLSEGKGFYRYLEVNFGFN------------GKQYQKSFLEDEELE 1308

Query: 734  HVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCC--EVKKCGIHFVHAQRQ 783
              ++DH+F  S  F  E +     EF F     CC   +K+CG+  ++  ++
Sbjct: 1309 FCKTDHLFFCSFKFESEMTFNDV-EFKF-----CCSNRIKECGVRLMYVSQE 1354


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 196/670 (29%), Positives = 317/670 (47%), Gaps = 102/670 (15%)

Query: 169  SNLKNLP---KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL------LIYSCKRLEN 219
            SN  +LP   K  S  LR  L   G  +E LPS+      +GEL      L Y  KR + 
Sbjct: 565  SNTVHLPRDFKFPSHELR-YLHWDGWTLESLPSNFDG-EKLGELSLRHSSLKYLWKRRKR 622

Query: 220  ISSSIFKLQFLESIRIHRCPNLQFL-EMPSCNIDGTRS--KEQPS-------SELKLKKC 269
            +   +  +    S  +  CPNL F   +    +DG  S  +  PS       + L +K C
Sbjct: 623  LPKLVV-IDLGNSQHLLECPNLSFAPRVERLILDGCTSLPEVHPSVTKLKRLTILNVKNC 681

Query: 270  PRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
                  PS       L SLE+++   C   ++ P+  G ++ L  L ++GTAI ELP  +
Sbjct: 682  KMLHYFPS----ITGLESLEVLNLSGCSKIDKFPEIQGCMENLLELNLEGTAIVELPPSV 737

Query: 327  GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNID 379
              L  L  L++KNC  L  + S+I+ LKS+ ++ +S CS L+ FPEI           +D
Sbjct: 738  VFLPRLVLLDMKNCKNLMILPSNIYSLKSLGTLVLSGCSGLEIFPEIMEDMECLQELLLD 797

Query: 380  GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
            G+ I+ +  S+        L + KC  L SLP+S+C  +SL +L +  C KL +LP++LG
Sbjct: 798  GTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLG 857

Query: 432  NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSL---EI 487
             L+ L +L+ +GT I + P SL  L  L +L  ++C   +   S  ++S  L  L   E 
Sbjct: 858  RLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRRC---KGSTSNSWISSLLFRLLHREN 914

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPES 545
             D    ++LP  +  L  LK L + G  +  R + ++LG L  LE L LS NNL  +PE 
Sbjct: 915  SDGTG-LQLP-YLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTVPEE 972

Query: 546  LNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEF 603
            +N+LS L  + ++   +L+ I  +L P  S+K LD  +  +L+ +       P  + S  
Sbjct: 973  VNRLSHLRVISVNQCKSLQEI-SKLPP--SIKLLDAGDCISLESLSVLSPQSPQFLSSSS 1029

Query: 604  TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG 663
                ++  L NC  L  + ++ I++    K   N    I  S+  PG+ IP+WF+H S G
Sbjct: 1030 CLRLVTFKLPNCFALAQDNVATILE----KLHQNFLPEIEYSIVLPGSTIPEWFQHPSIG 1085

Query: 664  STISLKTPQPTGYNK-LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD 722
            S+++++ P P  +NK  +GFA C V +    E  +  +                      
Sbjct: 1086 SSVTIELP-PNWHNKDFLGFALCSVFSLEEDEIIQGPA---------------------- 1122

Query: 723  SYTSSYLGKISHVESDHVFL----GSSIFAGENSC---KRSDEFFFHIDRSCCEVKKCGI 775
               + +L  I     DH++L    G+ +   ++S     R    +F +  +   VK CGI
Sbjct: 1123 --ETEWLRLI-----DHIWLVYQPGAKLMIPKSSSPNKSRKITAYFSLSGASHVVKNCGI 1175

Query: 776  HFVHAQRQRL 785
            H ++A+ +++
Sbjct: 1176 HLIYARDKKV 1185



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 245/523 (46%), Gaps = 73/523 (13%)

Query: 4    INSEIQINPYTFSKMTELRLLK-FCGSKNKCMVHSLEGVPFT------ELRYFEWHQFPL 56
            +++E+ +    F KMT LRLL+ +  ++N  +V +   +P        ELRY  W  + L
Sbjct: 532  LSNEMHLTSDAFKKMTRLRLLRVYQNAENNSIVSNTVHLPRDFKFPSHELRYLHWDGWTL 591

Query: 57   KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
            ++L +    E L  L +  S +  LW   + L  L  IDL  S+ L + P+LS A  +E 
Sbjct: 592  ESLPSNFDGEKLGELSLRHSSLKYLWKRRKRLPKLVVIDLGNSQHLLECPNLSFAPRVER 651

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L L  C+SL E H S+  L +L +L++  CK L   P+    + L+ L L GCS +   P
Sbjct: 652  LILDGCTSLPEVHPSVTKLKRLTILNVKNCKMLHYFPSITGLESLEVLNLSGCSKIDKFP 711

Query: 176  KMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
            ++  C      L L G  I ELP S+  L  +  L + +CK L  + S+I+ L+ L ++ 
Sbjct: 712  EIQGCMENLLELNLEGTAIVELPPSVVFLPRLVLLDMKNCKNLMILPSNIYSLKSLGTLV 771

Query: 235  IHRCPNL----QFLEMPSC----NIDGTRSKEQPSSELKLK--------KCPRPESLPSG 278
            +  C  L    + +E   C     +DGT  KE   S + LK        KC    SLP+ 
Sbjct: 772  LSGCSGLEIFPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNS 831

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
             C  +SL +L +  C    +LP++LG LQ L +L  DGTAI + P  L  L  L +L  +
Sbjct: 832  ICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFR 891

Query: 339  NC---SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
             C   +   +ISS +F+L   E                   N DG+G++           
Sbjct: 892  RCKGSTSNSWISSLLFRLLHRE-------------------NSDGTGLQ----------- 921

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDELGNLEALEELRVEGTGIREVPKSLA 454
                  LP  L    SL  L++  C   +R + D LG+L  LEEL +    +  VP+ + 
Sbjct: 922  ------LP-YLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTVPEEVN 974

Query: 455  QLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            +L+ L  + + +C S +       +SK   S++++D  + + L
Sbjct: 975  RLSHLRVISVNQCKSLQE------ISKLPPSIKLLDAGDCISL 1011


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 214/828 (25%), Positives = 360/828 (43%), Gaps = 128/828 (15%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEG--VPFTELRYFEWHQFPLKTLNIL 62
            N E+ ++  +F  M  LR L+    +       LEG  +P  EL++ +W   PLK + + 
Sbjct: 588  NKEVILHTKSFEPMVNLRQLQINNRR-------LEGKFLP-AELKWLQWQGCPLKHMPLK 639

Query: 63   HW-ENLVSLKMPGSKVTQL---WDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
             W   L  L +  SK  +    W+D +   +L  ++L Y   LT +PDLS  + LE +DL
Sbjct: 640  SWPRELAVLDLKNSKKIETLWGWNDYKVPRNLMVLNLSYCIELTAIPDLSGCRRLEKIDL 699

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKM 177
              C +LT  H SI  L+ L  L L RC SL +LP  +   K L+ L L GC+ LK+LP+ 
Sbjct: 700  ENCINLTNIHDSIGSLSTLRSLKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPEN 759

Query: 178  TSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                L+S   L   G  I ELP SI  L+ +  L++  CK L  + SSI  L  L+ + +
Sbjct: 760  IGI-LKSLKALHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSL 818

Query: 236  HRCP------------NLQFLEMPSCNIDGTRSKEQPSSELKLKK----CPRPESLPSGQ 279
            ++              NL+ L +  C    T   +   S + L +      + + LPS  
Sbjct: 819  YQSGLEELPDSIGSLNNLERLNLMWCE-SLTVIPDSIGSLISLTQLFFNSTKIKELPSTI 877

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                 L  L + +C    +LP+ +  L ++  L +DGT I +LP+ +G++ LL KLE+ N
Sbjct: 878  GSLYYLRELSVGNCKFLSKLPNSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMN 937

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            C  LEY+  SI  L  + ++ + N                                   +
Sbjct: 938  CKNLEYLPESIGHLAFLTTLNMFN---------------------------------GNI 964

Query: 400  ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-AL 458
              LP S+   ++L +L +  CK L +LP  +GNL++L    +E T +  +P+S  +L +L
Sbjct: 965  RELPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEETCVASLPESFGRLSSL 1024

Query: 459  SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR- 517
              L++ K  +  +  +           E  +  N   L     NL  L  L  +   I  
Sbjct: 1025 RTLRIAKRPNLNTNENSFLA-------EPEENHNSFVLTPSFCNLTLLTELDARSWRISG 1077

Query: 518  EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLK 576
            ++P+   +LS LE L L  N+ Q +P SL  LS L  L L N   L  +P     L  L 
Sbjct: 1078 KIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPSLPSSLIELN 1137

Query: 577  YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP-------NELSEIIKD 629
              + +   L+ I +          S   SL+  + L NC+K+           L  +   
Sbjct: 1138 VENCYA--LETIHDM---------SNLESLK-ELKLTNCVKVRDIPGLEGLKSLRRLYLS 1185

Query: 630  GWMKQSVNGETYITK-------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGF 682
            G +  S      ++K       ++  PG ++P+WF    +G T+    P+     +L G 
Sbjct: 1186 GCVACSSQIRKRLSKVVLKNLQNLSMPGGKLPEWF----SGQTVCFSKPKNL---ELKGV 1238

Query: 683  AFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY-LGKISHVESDHVF 741
               VV++ + +      +++ +    + DV  +   +G   +++   +  +   + +H+ 
Sbjct: 1239 IVGVVLSINHNINIGIPNMQREHMPGVLDVQANVLKQGKTLFSTVLNICGVPRTDEEHIH 1298

Query: 742  LG---------SSIFAGENSC--KRSDEFFFHIDRSCCEVKKCGIHFV 778
            L          + +  G+  C  KR+  F    D+   E+K+CG+H +
Sbjct: 1299 LCRFHDYHQLIAILKDGDTFCVSKRNPPF----DKG-LELKQCGVHLI 1341


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 276/592 (46%), Gaps = 100/592 (16%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
            E+ +   +F  M  LRLL+     N  +    + +P  EL++ +W   PLKTL +    +
Sbjct: 591  ELILQTKSFESMINLRLLQI---DNVQLEGEFKLMP-AELKWLQWRGCPLKTLPSDFCPQ 646

Query: 66   NLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
             L  L +  SK + +LW +     +L  ++L     LT +PDLS  Q LE L L +C  L
Sbjct: 647  GLRVLDLSESKNIERLWGESWVGENLMVMNLHGCCNLTAIPDLSGNQALEKLILQHCHGL 706

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
             + H SI  +  L  LDL  CK+L   P+ +   K L+ L+L GCS LK LP+  S +++
Sbjct: 707  VKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENIS-YMK 765

Query: 184  STLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            S   LL  G  IE+LP S+  L+ +  L + +C+ L+ + + I K   LES+R       
Sbjct: 766  SLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGK---LESLR------- 815

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE---IIDCPNFER 298
                    + + +  +E P S                   F SLT+LE   ++ C +   
Sbjct: 816  ------ELSFNDSALEEIPDS-------------------FGSLTNLERLSLMRCQSIYA 850

Query: 299  LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            +PD + NL+ L   +++G+ + ELP  +G L+ L  L + +C  L  + +SI        
Sbjct: 851  IPDSVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHCRFLSKLPASI-------- 902

Query: 359  IEISNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFK 410
                     +G   +    +DG+ I  +P  +        L++  C +LESLP ++    
Sbjct: 903  ---------EGLASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMG 953

Query: 411  SLTSLEIID-----------------------CKKLERLPDELGNLEALEELRVEGTGIR 447
            SL +L I+D                       CK+L RLP  +GNL++L  L++E T +R
Sbjct: 954  SLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEETAVR 1013

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            ++P+S   L +L +L + K    E LP  L  +++   L   +    + LP    NL  L
Sbjct: 1014 QLPESFGMLTSLMRLLMAKRPHLE-LPQALGPTET-KVLGAEENSELIVLPTSFSNLSLL 1071

Query: 507  KVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
              L  +   I  ++P+   +LSSLE L L  NN   +P SL  LS L  L L
Sbjct: 1072 YELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLL 1123



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 184/399 (46%), Gaps = 70/399 (17%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
             L L +C      PS     K+L +L +  C   + LP+ +  +++L  L++DGT I +L
Sbjct: 721  HLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKL 780

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            PE + +L  L +L L NC  L+ + + I KL+S+  +  ++ +      EIP      + 
Sbjct: 781  PESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSA----LEEIPDSFGSLTN 836

Query: 383  IER-----------IPSSVLKLN-------KCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
            +ER           IP SV  L          S +  LP+S+    +L  L +  C+ L 
Sbjct: 837  LERLSLMRCQSIYAIPDSVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHCRFLS 896

Query: 425  RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLT 483
            +LP  +  L ++  L+++GT I ++P  +  L  L +L+++ C   ESLP  +    SL 
Sbjct: 897  KLPASIEGLASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLN 956

Query: 484  SLEIID-----------------------CKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            +L I+D                       CK   RLP  IGNL+ L  L ++ TA+R++P
Sbjct: 957  TLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEETAVRQLP 1016

Query: 521  ESLGQLSSLEWLVLS-----------------------DNNLQIIPESLNQLSSLVSLKL 557
            ES G L+SL  L+++                       ++ L ++P S + LS L  L  
Sbjct: 1017 ESFGMLTSLMRLLMAKRPHLELPQALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDA 1076

Query: 558  SNNNLE-RIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
                +  +IP+  D LSSL+ L+L  NN   +P  LR  
Sbjct: 1077 RAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGL 1115


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 235/507 (46%), Gaps = 79/507 (15%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSK------------------NKCMVHSLEGVPF--TEL 46
           E+  +   F+KM +LR+ +F  ++                   +C  H      F    L
Sbjct: 519 ELHFSVNVFTKMNKLRVXRFYDAQIWGSSWIWRRNDRYKSPYTECKFHLSGDFKFLSNHL 578

Query: 47  RYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
           R   W  +PLK+L +  H E L+ LKM  S++ QLW+  ++   LK I+L +S+ L K P
Sbjct: 579 RSLYWDGYPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKXP 638

Query: 106 DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
           D S A  L  + L  C+SL + H SI  L KL  L+L+ CK+L S  +SIH + L+ L L
Sbjct: 639 DFSGAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIHLESLQILTL 698

Query: 166 RGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
            GCS LK  P++       S L L G  I+ LP SI+ L+ +    +  CK LE++    
Sbjct: 699 SGCSKLKKXPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCX 758

Query: 225 FKLQFLES------IRIHRCPNLQ--FLEMPSCNIDGTRSKEQPSS--------ELKLKK 268
           FKL+ L++      +R+ + P +Q     +    +D T  +E PSS         LKLK 
Sbjct: 759 FKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKN 818

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
           C R  SLP   C   SL +L +  C   ++LPD++G+LQ L +L  +G+ I+E+P  +  
Sbjct: 819 CKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITL 878

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
           L  L  L L  C                     S   NL               +   P+
Sbjct: 879 LTRLQVLSLAGCKG-----------------GGSKSRNL------------ALSLRASPT 909

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIR 447
             L+L          SSL +  SL  L + D   LE  LP +L +L  LE L +      
Sbjct: 910 DGLRL----------SSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFI 959

Query: 448 EVPKSLAQLA-LSKLKLKKCSSFESLP 473
            VP SL++L  L +L ++ C + +SLP
Sbjct: 960 TVPTSLSRLPHLRRLIVEHCKNLQSLP 986



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 264/559 (47%), Gaps = 73/559 (13%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C   +S  S     +SL  L +  C   ++ P+  G +  L+ L + GTAI+ LP
Sbjct: 673  LNLEGCKNLKSFLS-SIHLESLQILTLSGCSKLKKXPEVQGAMDNLSELSLKGTAIKGLP 731

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFC 376
              +  L  L+   L+ C  LE +    FKLKS++++ +SNC  LK  PEI          
Sbjct: 732  LSIEYLNGLALFNLEECKSLESLPGCXFKLKSLKTLILSNCLRLKKLPEIQENMESLKEL 791

Query: 377  NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +D +G+  +PSS+        LKL  C +L SLP S+C   SL +L +  C +L++LPD
Sbjct: 792  FLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPD 851

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            ++G+L+ L +L+  G+GI+EVP S+  L  L  L L  C    S    L +S   +    
Sbjct: 852  DMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSRNLALSLRASP--- 908

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPES 545
                + +RL   +  L  LK L +    + E  +P  L  LS LE L LS NN   +P S
Sbjct: 909  ---TDGLRL-SSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFITVPTS 964

Query: 546  LNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFT 604
            L++L  L  L + +  NL+ +PE   P SS+K  +L  N+   +  +  S+P+S      
Sbjct: 965  LSRLPHLRRLIVEHCKNLQSLPEL--P-SSIK--ELLANDCTSLETF--SYPSSAYPLRK 1017

Query: 605  SLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM----------------YF 648
                + +  NC +L  NE S+ ++   + Q +     I KSM                  
Sbjct: 1018 FGDFNFEFSNCFRLVGNEQSDTVEA--ILQEIRLVASIQKSMAPSEHSARYGESRYDAVV 1075

Query: 649  PGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDDRKC 707
            PG+ IP+WF HQS G +I+++ P P  YN   +G A C V            S+    + 
Sbjct: 1076 PGSRIPEWFTHQSEGDSITVELP-PGCYNTNSIGLAACAVFHPKF-------SMGKIGRS 1127

Query: 708  NLFDVVCDRRSEGY--DSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDR 765
              F V     S G+  D+ TS +  K     +DH++ G  + +G +  +   +  F   +
Sbjct: 1128 AYFSV---NESGGFSLDNTTSMHFSK-----ADHIWFGYRLISGVD-LRDHLKVAFATSK 1178

Query: 766  SCCE-VKKCGIHFVHAQRQ 783
               E VKKCG+  V+ Q +
Sbjct: 1179 VPGEVVKKCGVRLVYEQDE 1197



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 9/109 (8%)

Query: 380  GSGIERIPSSVLKLNKCSKLESLPS------SLCMFKSLTSLEIIDCKKLERLPDELGNL 433
             +   ++P  V+    CS + + PS      ++C   +L +L +  C +L++LPDE+ +L
Sbjct: 1225 AASFSKLPPVVIHDESCSYI-AFPSRRFFNGNICKLTALQTLTLSGCTELKKLPDEMESL 1283

Query: 434  EALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSL 482
            + L +L+  G+G +E   S+    L+KL+ +K  +     S L    S+
Sbjct: 1284 QCLVKLKANGSGRQEASTSIT--LLTKLQPQKTHTGTVQKSSLIARASI 1330


>gi|224131094|ref|XP_002328452.1| predicted protein [Populus trichocarpa]
 gi|222838167|gb|EEE76532.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 164/538 (30%), Positives = 246/538 (45%), Gaps = 109/538 (20%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFC-------GSKNKCM------VHSLEGVPF--TE 45
           +     +++++P  F  M  LRLLK          SK + M      +H   G+ F  +E
Sbjct: 64  LDATKDQLRLSPTAFEGMYNLRLLKIYYPPFLKNPSKEQIMNRKRVGIHLPGGLHFLSSE 123

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           LR+  W+ +PLK+L +    E    L+MP S++ QLW++ Q L +L+  +   SKL +  
Sbjct: 124 LRFLYWYNYPLKSLPSNFFPEKPFQLEMPCSQLEQLWNEGQPLENLELTNPPSSKLSSID 183

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
            DLS   +LE+L  G         SSI+Y  +L  L+L R +S  +LP+SI      RL 
Sbjct: 184 SDLSKVPHLEVLHPG-------IPSSIKYSTRLTTLELPRFESFCTLPSSIL-----RLN 231

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
           L  C +L +LP                 I+EL S +       EL +YSC +L  + +SI
Sbjct: 232 LSFCESLASLPD---------------NIDELKSLV-------ELDLYSCSKLVRLPNSI 269

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
            KL+ L  + +   P L    +P  NI   RS     +EL +  C +  SLP      +S
Sbjct: 270 CKLKCLAKLNLGGQPKLA--NLPD-NIGELRSL----AELNVYSCSKLASLPDSIGELRS 322

Query: 285 LTSLEIIDCPNFERLPDELGNLQALN--------------RLIIDGTAIRELPEGLGQLA 330
           L +L +  C     LPD +G L++L+              R   D   +  LP+ +G L 
Sbjct: 323 LGALNVFSCLGLASLPDSIGGLRSLHCALYYLLLRTSKSTRQYCDSPGLASLPDSIGALK 382

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNI-DGSG 382
            L  L+L  CS L  +  SI  LKS++ +++S CS L   P+       +   ++ D  G
Sbjct: 383 SLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDSIGALKSLKRLDLSDSPG 442

Query: 383 IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           +  +P S+        L L+ CS L SLP S+C  KSL  L++I C  L  LPD +G L+
Sbjct: 443 LASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDLIGCSGLASLPDRIGELK 502

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            LE L + G                      CS   SLP  +Y  K L  L++ DC +
Sbjct: 503 YLESLELCG----------------------CSGLASLPDSIYELKCLEWLDLSDCSD 538



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 177/368 (48%), Gaps = 57/368 (15%)

Query: 216 RLENISSSIFKLQFLESIR------IHRCPNLQFLEMPS----CNIDGTRSKEQPSSELK 265
           +L +I S + K+  LE +       I     L  LE+P     C +        PSS L+
Sbjct: 178 KLSSIDSDLSKVPHLEVLHPGIPSSIKYSTRLTTLELPRFESFCTL--------PSSILR 229

Query: 266 LKK--CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L    C    SLP      KSL  L++  C    RLP+ +  L+ L +L + G   +  L
Sbjct: 230 LNLSFCESLASLPDNIDELKSLVELDLYSCSKLVRLPNSICKLKCLAKLNLGGQPKLANL 289

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------- 373
           P+ +G+L  L++L + +CS+L  +  SI +L+S+ ++ + +C  L   P+          
Sbjct: 290 PDNIGELRSLAELNVYSCSKLASLPDSIGELRSLGALNVFSCLGLASLPDSIGGLRSLHC 349

Query: 374 --------------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKS 411
                          +C  D  G+  +P S+        L L+ CS L SLP S+   KS
Sbjct: 350 ALYYLLLRTSKSTRQYC--DSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKS 407

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           L  L++  C  L  LPD +G L++L+ L + +  G+  +P S+  L +L  L L  CS  
Sbjct: 408 LKCLDLSGCSGLASLPDSIGALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGL 467

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSS 528
            SLP  +   KSL  L++I C     LPD IG L+YL+ L + G + +  +P+S+ +L  
Sbjct: 468 VSLPDSICALKSLQLLDLIGCSGLASLPDRIGELKYLESLELCGCSGLASLPDSIYELKC 527

Query: 529 LEWLVLSD 536
           LEWL LSD
Sbjct: 528 LEWLDLSD 535



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 186/404 (46%), Gaps = 53/404 (13%)

Query: 244 LEMPSCNIDGTRSKEQPSSELKL---------------KKCPRPESL-PSGQCMFKSLTS 287
           LEMP   ++   ++ QP   L+L                K P  E L P      K  T 
Sbjct: 149 LEMPCSQLEQLWNEGQPLENLELTNPPSSKLSSIDSDLSKVPHLEVLHPGIPSSIKYSTR 208

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L  ++ P FE       ++  LN    +  A   LP+ + +L  L +L+L +CS+L  + 
Sbjct: 209 LTTLELPRFESFCTLPSSILRLNLSFCESLA--SLPDNIDELKSLVELDLYSCSKLVRLP 266

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           +SI KLK +  +      NL G P++   N+  +  E    + L +  CSKL SLP S+ 
Sbjct: 267 NSICKLKCLAKL------NLGGQPKL--ANLPDNIGELRSLAELNVYSCSKLASLPDSIG 318

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL--SKLKLKK 465
             +SL +L +  C  L  LPD +G             G+R +  +L  L L  SK   + 
Sbjct: 319 ELRSLGALNVFSCLGLASLPDSIG-------------GLRSLHCALYYLLLRTSKSTRQY 365

Query: 466 CSS--FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPES 522
           C S    SLP  +   KSL  L++  C     LPD IG L+ LK L + G + +  +P+S
Sbjct: 366 CDSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDS 425

Query: 523 LGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           +G L SL+ L LSD+  L  +P+S+  L SL  L LS  + L  +P+ +  L SL+ LDL
Sbjct: 426 IGALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDL 485

Query: 581 -----FENNLDRIPE--YLRSFPTSIPSEFTSLRLSVDLRNCLK 617
                  +  DRI E  YL S      S   SL  S+    CL+
Sbjct: 486 IGCSGLASLPDRIGELKYLESLELCGCSGLASLPDSIYELKCLE 529


>gi|8843806|dbj|BAA97354.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1152

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 226/443 (51%), Gaps = 40/443 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLL----KFCGSKNKCMVHSLEGVPFT--ELRYFEWHQF 54
           + +I+ E+ ++   F  M  LR L    K   S  K  +H  E   +   +L+   W ++
Sbjct: 443 VDEIDHELNVHEKAFQGMRNLRFLNIYTKALMSGQKIRLHLPENFDYLPPKLKLLCWDKY 502

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P++ L +    ENLV LKM  S++ +LW+ V +L  LK +DL+ SK L ++PDLS+A NL
Sbjct: 503 PMRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNL 562

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           + L+L YCSSL +  SSIQ LNKL  L+++ C +L +LP  I+ K L RL LRGCS L+ 
Sbjct: 563 KTLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRM 622

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSS--IKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            P +++    S L L    IEE PS+  +K L ++    + S K  E +      ++ L 
Sbjct: 623 FPDISNN--ISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLS 680

Query: 232 SIRIHRCPNLQFLEMPS-----CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
                    L   ++PS     C I   +       EL +++C   ESLP+G   FK L 
Sbjct: 681 PPLAKNFNTLYLSDIPSLVELPCGIQNLKK----LMELSIRRCKNLESLPTG-ANFKYLD 735

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L++  C      PD    +     L ++ T I E+P  +     L+ L +  C++L+Y+
Sbjct: 736 YLDLSGCSKLRSFPDISSTISC---LCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYV 792

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCN----IDGSGIERIPSSVLKLNKCSKLESL 402
           S +IFKLK ++  + S+C  L    E+ +CN    +  +  + I   +L       +   
Sbjct: 793 SLNIFKLKHLDKADFSDCGTL---TEVSWCNKTISVAAATADNIQPKLL-------VSEA 842

Query: 403 PSSLCMFKSLTSLEIIDCKKLER 425
            SSLC+ KS+  +  I+C KL++
Sbjct: 843 SSSLCVQKSV--VRFINCFKLDQ 863



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 206/540 (38%), Gaps = 96/540 (17%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G      L  +++    N + +PD     NL+ LN  +   +++ ++   +  L 
Sbjct: 527  EKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLN--LKYCSSLVKISSSIQNLN 584

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERI 386
             L+KL ++ C+ LE + + I  LKS+  +++  CS L+ FP+I        +D + IE  
Sbjct: 585  KLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDISNNISVLFLDKTSIEEF 643

Query: 387  PS----------SVLKLNKCSKLESLPSSLCMFKSLT--------SLEIIDCKKLERLPD 428
            PS          S+ ++N     E +    C+ K L+        +L + D   L  LP 
Sbjct: 644  PSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNFNTLYLSDIPSLVELPC 703

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
             + NL+ L EL +                      ++C + ESLP+     K L  L++ 
Sbjct: 704  GIQNLKKLMELSI----------------------RRCKNLESLPTGANF-KYLDYLDLS 740

Query: 489  DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN 547
             C      PD    +     L +  T I EVP  +     L +L + + N L+ +  ++ 
Sbjct: 741  GCSKLRSFPDISSTIS---CLCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYVSLNIF 797

Query: 548  QLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRI-PEYLRSFPTSIPSEFTS 605
            +L  L     S+   L  +          K + +     D I P+ L S      S    
Sbjct: 798  KLKHLDKADFSDCGTLTEVS------WCNKTISVAAATADNIQPKLLVS---EASSSLCV 848

Query: 606  LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGST 665
             +  V   NC KLD   L +             +  + KS+   G E+P +F H++TG++
Sbjct: 849  QKSVVRFINCFKLDQEALLQ-------------QEPVFKSLILGGEEVPAYFNHRATGNS 895

Query: 666  ISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRS---EGYD 722
            + +     +     +GF  C +V            ++         V C  R      +D
Sbjct: 896  LVIPLVPTSISLDFLGFRACALVDVKAMSMPGRVDIQ---------VSCRFRGSLKNHFD 946

Query: 723  SYTSSYLGKISHVESDHVFLGSSIFAGENSCK-----RSDEFFFHIDRSCCEVKKCGIHF 777
            S   S+   ++  ++ H+ +    FA  N          D  F     S  ++  CGI F
Sbjct: 947  SADHSH-SLVAFHKASHLLIFDCRFALNNDSNPLNYAHMDITFHLTTDSVSKINACGIRF 1005


>gi|110741935|dbj|BAE98908.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 968

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 226/443 (51%), Gaps = 40/443 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLL----KFCGSKNKCMVHSLEGVPFT--ELRYFEWHQF 54
           + +I+ E+ ++   F  M  LR L    K   S  K  +H  E   +   +L+   W ++
Sbjct: 346 VDEIDHELNVHEKAFQGMRNLRFLNIYTKALMSGQKIRLHLPENFDYLPPKLKLLCWDKY 405

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P++ L +    ENLV LKM  S++ +LW+ V +L  LK +DL+ SK L ++PDLS+A NL
Sbjct: 406 PMRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNL 465

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           + L+L YCSSL +  SSIQ LNKL  L+++ C +L +LP  I+ K L RL LRGCS L+ 
Sbjct: 466 KTLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRM 525

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSS--IKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            P +++    S L L    IEE PS+  +K L ++    + S K  E +      ++ L 
Sbjct: 526 FPDISNN--ISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLS 583

Query: 232 SIRIHRCPNLQFLEMPS-----CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
                    L   ++PS     C I   +       EL +++C   ESLP+G   FK L 
Sbjct: 584 PPLAKNFNTLYLSDIPSLVELPCGIQNLKK----LMELSIRRCKNLESLPTG-ANFKYLD 638

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L++  C      PD    +     L ++ T I E+P  +     L+ L +  C++L+Y+
Sbjct: 639 YLDLSGCSKLRSFPDISSTISC---LCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYV 695

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCN----IDGSGIERIPSSVLKLNKCSKLESL 402
           S +IFKLK ++  + S+C  L    E+ +CN    +  +  + I   +L       +   
Sbjct: 696 SLNIFKLKHLDKADFSDCGTL---TEVSWCNKTISVAAATADNIQPKLL-------VSEA 745

Query: 403 PSSLCMFKSLTSLEIIDCKKLER 425
            SSLC+ KS+  +  I+C KL++
Sbjct: 746 SSSLCVQKSV--VRFINCFKLDQ 766



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 122/555 (21%), Positives = 214/555 (38%), Gaps = 97/555 (17%)

Query: 259 QPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIID 315
           +P + +KLK +    E L  G      L  +++    N + +PD     NL+ LN  +  
Sbjct: 415 RPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLN--LKY 472

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP- 374
            +++ ++   +  L  L+KL ++ C+ LE + + I  LKS+  +++  CS L+ FP+I  
Sbjct: 473 CSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDISN 531

Query: 375 ---FCNIDGSGIERIPS----------SVLKLNKCSKLESLPSSLCMFKSLT-------- 413
                 +D + IE  PS          S+ ++N     E +    C+ K L+        
Sbjct: 532 NISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNFN 591

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
           +L + D   L  LP  + NL+ L EL +                      ++C + ESLP
Sbjct: 592 TLYLSDIPSLVELPCGIQNLKKLMELSI----------------------RRCKNLESLP 629

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           +     K L  L++  C      PD    +     L +  T I EVP  +     L +L 
Sbjct: 630 TGANF-KYLDYLDLSGCSKLRSFPDISSTIS---CLCLNRTGIEEVPSWIENFVRLTYLT 685

Query: 534 LSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRI-PE 590
           + + N L+ +  ++ +L  L     S+   L  +          K + +     D I P+
Sbjct: 686 MLECNKLKYVSLNIFKLKHLDKADFSDCGTLTEVSW------CNKTISVAAATADNIQPK 739

Query: 591 YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG 650
            L S      S     +  V   NC KLD   L +             +  + KS+   G
Sbjct: 740 LLVS---EASSSLCVQKSVVRFINCFKLDQEALLQ-------------QEPVFKSLILGG 783

Query: 651 NEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLF 710
            E+P +F H++TG+++ +     +     +GF  C +V            ++        
Sbjct: 784 EEVPAYFNHRATGNSLVIPLVPTSISLDFLGFRACALVDVKAMSMPGRVDIQ-------- 835

Query: 711 DVVCDRRS---EGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCK-----RSDEFFFH 762
            V C  R      +DS   S+   ++  ++ H+ +    FA  N          D  F  
Sbjct: 836 -VSCRFRGSLKNHFDSADHSH-SLVAFHKASHLLIFDCRFALNNDSNPLNYAHMDITFHL 893

Query: 763 IDRSCCEVKKCGIHF 777
              S  ++  CGI F
Sbjct: 894 TTDSVSKINACGIRF 908


>gi|222619838|gb|EEE55970.1| hypothetical protein OsJ_04699 [Oryza sativa Japonica Group]
          Length = 763

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 256/546 (46%), Gaps = 59/546 (10%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           +T L   +QNL SL+ + L+  K L  LP+ +    +LE   +  C  LT    S++ L 
Sbjct: 253 LTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNLT 312

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
            L  L LD CK L +LP  +     LK+ V+  C      PK+T                
Sbjct: 313 ALIELHLDGCKGLETLPEGLGLLISLKKFVISNC------PKLTY--------------- 351

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP S+K L+ + EL +  CKRLE +   +  L  L+ I I+  P L FL     N+   
Sbjct: 352 -LPESMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAM 410

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
           +        L L  C   E LP G  M  SL    +IDCP    LP+ + NL AL  L +
Sbjct: 411 KV-------LYLYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRL 463

Query: 315 DG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           DG   +  LPEGLG L  L K  + NC +L ++  S+  L ++  + +  C  L+  PE 
Sbjct: 464 DGCKGLEILPEGLGLLISLEKFIINNCPKLTFLPESMKNLTALIELWLDGCKGLEILPE- 522

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
                 G G+       + ++ C KL  LP S+    +L  L +  CK LE LP+ LG L
Sbjct: 523 ------GLGLLICLEKFIIMD-CPKLTFLPESMKNLTALIRLLLDGCKGLEILPEWLGML 575

Query: 434 EALEE-LRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            +LEE + ++   +  +P S+  L A+++L+L  C   E LP  L +   L    I DC 
Sbjct: 576 VSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKGLEILPEGLGLHIPLKRFVINDCP 635

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
               LP+ +G+L  LK L I+ +  +  +PES+  L++LE L L   N   +PE + Q  
Sbjct: 636 MLTFLPELLGHLTALKCLDIQSSPNLTYLPESMKNLTALEELWLEGFN--SLPEWIGQFI 693

Query: 551 SLVSLKLSNN-NLERIPERLDPLSSLKYLDLF-------------ENNLDRIPEYLRSFP 596
            L  + + ++ NL  +PE +  +++L+ L ++              N + RIP+ +    
Sbjct: 694 YLKEISIFDSPNLTSLPESIWNITTLELLYIYFCPRLAEWCQREDANKISRIPKIMLDGE 753

Query: 597 TSIPSE 602
             IP +
Sbjct: 754 IFIPGQ 759



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 189/424 (44%), Gaps = 53/424 (12%)

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
           G+   P  ++   ++ EL + S + LE +   + +L  LE I    CP L  L     N+
Sbjct: 204 GLRTFPDILQSFVSLRELYLCSWENLEILPEWLGQLICLEVIEFINCPVLTTLPTSLQNL 263

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
              R       EL L+ C   E+LP G     SL    I+DCP    LP+ + NL AL  
Sbjct: 264 TSLR-------ELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNLTALIE 316

Query: 312 LIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
           L +DG   +  LPEGLG L  L K  + NC +L Y+  S+ KL ++  + +  C  L+  
Sbjct: 317 LHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRLDGCKRLETL 376

Query: 371 PE---------------IPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTS 414
           P+                P        ++ + +  VL L  C +LE LP  L M  SL  
Sbjct: 377 PKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVLYLYGCKELEILPEGLGMLISLEK 436

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL----------------- 456
             +IDC KL  LP+ + NL AL ELR++G  G+  +P+ L  L                 
Sbjct: 437 FVLIDCPKLTFLPESMKNLTALIELRLDGCKGLEILPEGLGLLISLEKFIINNCPKLTFL 496

Query: 457 --------ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
                   AL +L L  C   E LP  L +   L    I+DC     LP+ + NL  L  
Sbjct: 497 PESMKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIR 556

Query: 509 LTIKGTAIREV-PESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
           L + G    E+ PE LG L SLE  ++ D   L  +P S+  L+++  L+L     LE +
Sbjct: 557 LLLDGCKGLEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKGLEIL 616

Query: 566 PERL 569
           PE L
Sbjct: 617 PEGL 620



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 158/369 (42%), Gaps = 78/369 (21%)

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE-GLGQLA---LLSKLE 336
           +  +L  L+ +DCP    LP    ++       +D +  + LPE G G LA   L  ++ 
Sbjct: 120 LIPNLHFLKAVDCPKLSFLPYPPRSMHW----SLDNSD-KVLPERGFGSLASSTLPFRVV 174

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----------EIPFCN--------- 377
           + NC     +      L ++E  ++  CS L+ FP          E+  C+         
Sbjct: 175 INNCKYPPDMWVRFQHLATIEIFQVEGCSGLRTFPDILQSFVSLRELYLCSWENLEILPE 234

Query: 378 -------------IDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLE 416
                        I+   +  +P+S+        L L  C  LE+LP  +    SL    
Sbjct: 235 WLGQLICLEVIEFINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFI 294

Query: 417 IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL------------------- 456
           I+DC KL  LP+ + NL AL EL ++G  G+  +P+ L  L                   
Sbjct: 295 IMDCPKLTFLPESMKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPE 354

Query: 457 ------ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                  L +L+L  C   E+LP  L +  SL  + I +      LP+ + NL  +KVL 
Sbjct: 355 SMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVLY 414

Query: 511 IKGTAIREV-PESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           + G    E+ PE LG L SLE  VL D   L  +PES+  L++L+ L+L     LE +PE
Sbjct: 415 LYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRLDGCKGLEILPE 474

Query: 568 RLDPLSSLK 576
            L  L SL+
Sbjct: 475 GLGLLISLE 483


>gi|168042943|ref|XP_001773946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674790|gb|EDQ61294.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 165/507 (32%), Positives = 246/507 (48%), Gaps = 29/507 (5%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVL 140
           +++ NL SL  ++L     LT LP+ L    +L  L+L  CS LT   + +  L  L  L
Sbjct: 38  NELGNLTSLTSLNLSGCWELTSLPNELGNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSL 97

Query: 141 DLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG----IEE 195
           D+ +C  LTSLP  + +   L  L L GC  L +LP     +L S L  L +     +  
Sbjct: 98  DMSKCPYLTSLPNELGNLASLTSLNLSGCWKLTSLPNELG-NLTS-LAFLNLCDCSRLTS 155

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP+ +  L+ +  L I  C +L ++ + +  L  L S+ + RC  L  L     N+    
Sbjct: 156 LPNELGNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLISLT 215

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-II 314
           S       L L  C    SLP+      SL SL + +CP+   LP+ELGNL  L  L I 
Sbjct: 216 S-------LNLSGCWELTSLPNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNIS 268

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           +   +  LP  LG L  L+ L L  C +L  + + +  + ++ S+ IS C  L   P   
Sbjct: 269 ECLKLTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPN-- 326

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
               +   +  + S  L +++C KL SLP+ L    SLTS+ + DC +L+ LP+EL NL 
Sbjct: 327 ----ELGNLTTLTS--LNISRCQKLTSLPNELGNLTSLTSINLCDCSRLKSLPNELSNLT 380

Query: 435 ALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            L    + G   +  +P  L  L +L  L L  C    SL + L    SLTSL I  C+ 
Sbjct: 381 TLTSSNISGCLKLTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNISGCQK 440

Query: 493 FMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLS 550
              LP+E+GNL  L  + ++  + ++ +P  LG L+SL  L +S    L  +P  L  L+
Sbjct: 441 LTSLPNELGNLTSLTSINLRHCSRLKSLPNELGNLTSLTSLNISGCWELTSLPNELGNLT 500

Query: 551 SLVSLKLSNN-NLERIPERLDPLSSLK 576
           SL+SL LS    L  +P +L  L+SL 
Sbjct: 501 SLISLNLSRCWELTSLPNKLSNLTSLT 527



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 166/535 (31%), Positives = 243/535 (45%), Gaps = 60/535 (11%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L+L  CS LT   + +  L+ L  L++ +C+SL SLP                + L NL 
Sbjct: 1   LNLRDCSRLTSLPNELGNLSSLTTLNMSKCRSLASLP----------------NELGNLT 44

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
            +TS +L     L       LP+ +  L+++  L +  C RL ++ + +  L  L S+ +
Sbjct: 45  SLTSLNLSGCWEL-----TSLPNELGNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDM 99

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
            +CP L  L     N+    S       L L  C +  SLP+      SL  L + DC  
Sbjct: 100 SKCPYLTSLPNELGNLASLTS-------LNLSGCWKLTSLPNELGNLTSLAFLNLCDCSR 152

Query: 296 FERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
              LP+ELGNL  L  L I G   +  LP  LG L  L+ L L  C +L  + + +  L 
Sbjct: 153 LTSLPNELGNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLI 212

Query: 355 SVESIEISNCSNLKGFP---------------EIPFCNIDGSGIERIPS-SVLKLNKCSK 398
           S+ S+ +S C  L   P               E P   I  + +  + + + L +++C K
Sbjct: 213 SLTSLNLSGCWELTSLPNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNISECLK 272

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL- 456
           L SLP+ L    SLTSL +  C  L  LP+ELGN+  L  L + G   +  +P  L  L 
Sbjct: 273 LTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNELGNLT 332

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-A 515
            L+ L + +C    SLP+ L    SLTS+ + DC     LP+E+ NL  L    I G   
Sbjct: 333 TLTSLNISRCQKLTSLPNELGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNISGCLK 392

Query: 516 IREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS 573
           +  +P  LG L SL  L LS    L  +   L  L+SL SL +S    L  +P  L  L+
Sbjct: 393 LTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNISGCQKLTSLPNELGNLT 452

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNELSEI 626
           SL  ++L      R    L+S P  +    TSL  S+++  C +L   PNEL  +
Sbjct: 453 SLTSINL------RHCSRLKSLPNEL-GNLTSLT-SLNISGCWELTSLPNELGNL 499



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 199/405 (49%), Gaps = 40/405 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIREL 322
           L L+ C R  SLP+      SLT+L +  C +   LP+ELGNL +L  L + G   +  L
Sbjct: 1   LNLRDCSRLTSLPNELGNLSSLTTLNMSKCRSLASLPNELGNLTSLTSLNLSGCWELTSL 60

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCN 377
           P  LG L  L+ L L +CS L  + + +  L S+ S+++S C  L   P          +
Sbjct: 61  PNELGNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDMSKCPYLTSLPNELGNLASLTS 120

Query: 378 IDGSGIERIPS-----------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           ++ SG  ++ S           + L L  CS+L SLP+ L    +LTSL I  C KL  L
Sbjct: 121 LNLSGCWKLTSLPNELGNLTSLAFLNLCDCSRLTSLPNELGNLTTLTSLNISGCLKLTSL 180

Query: 427 PDELGNLEALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           P+ELGNL +L  L +     +  +P  L  L +L+ L L  C    SLP+ L    SL S
Sbjct: 181 PNELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNLSGCWELTSLPNDLNNLTSLVS 240

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSDN-NLQII 542
           L + +C + + LP+E+GNL  L  L I +   +  +P  LG L+SL  L LS   +L  +
Sbjct: 241 LNLFECPSLIILPNELGNLTTLTSLNISECLKLTSLPNELGNLTSLTSLNLSGCWDLTSL 300

Query: 543 PESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPT--- 597
           P  L  +++L SL +S    L  +P  L  L++L  L++     L  +P  L +  +   
Sbjct: 301 PNELGNMTTLTSLNISGCQKLTSLPNELGNLTTLTSLNISRCQKLTSLPNELGNLTSLTS 360

Query: 598 ----------SIPSEFTSLR--LSVDLRNCLKLD--PNELSEIIK 628
                     S+P+E ++L    S ++  CLKL   PNEL  +I 
Sbjct: 361 INLCDCSRLKSLPNELSNLTTLTSSNISGCLKLTSLPNELGNLIS 405



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 209/462 (45%), Gaps = 64/462 (13%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S++T L +++ NL SL  +D+     LT LP+ L    +L  L+L  C  LT   + +  
Sbjct: 79  SRLTSLPNELGNLTSLTSLDMSKCPYLTSLPNELGNLASLTSLNLSGCWKLTSLPNELGN 138

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-------MTSCHLRST 185
           L  L  L+L  C  LTSLP  + +   L  L + GC  L +LP        +TS +L   
Sbjct: 139 LTSLAFLNLCDCSRLTSLPNELGNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRC 198

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
             L+      LP+ +  L ++  L +  C  L ++ + +  L  L S+ +  CP+L  L 
Sbjct: 199 WKLI-----SLPNELGNLISLTSLNLSGCWELTSLPNDLNNLTSLVSLNLFECPSLIILP 253

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
               N+    S       L + +C +  SLP+      SLTSL +  C +   LP+ELGN
Sbjct: 254 NELGNLTTLTS-------LNISECLKLTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGN 306

Query: 306 LQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           +  L  L I G   +  LP  LG L  L+ L +  C +L  + + +  L S+ SI + +C
Sbjct: 307 MTTLTSLNISGCQKLTSLPNELGNLTTLTSLNISRCQKLTSLPNELGNLTSLTSINLCDC 366

Query: 365 SNLKGFPE-------IPFCNIDG----------------------SGIERIPS------- 388
           S LK  P        +   NI G                      SG   + S       
Sbjct: 367 SRLKSLPNELSNLTTLTSSNISGCLKLTSLPNELGNLISLISLNLSGCWELTSLRNELGN 426

Query: 389 ----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
               + L ++ C KL SLP+ L    SLTS+ +  C +L+ LP+ELGNL +L  L + G 
Sbjct: 427 LTSLTSLNISGCQKLTSLPNELGNLTSLTSINLRHCSRLKSLPNELGNLTSLTSLNISGC 486

Query: 445 G-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
             +  +P  L  L +L  L L +C    SLP++L    SLTS
Sbjct: 487 WELTSLPNELGNLTSLISLNLSRCWELTSLPNKLSNLTSLTS 528



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 27/317 (8%)

Query: 67  LVSLKMPGS-KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L SL + G  ++T L +D+ NL SL  ++L     L  LP+ L     L  L++  C  L
Sbjct: 214 LTSLNLSGCWELTSLPNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNISECLKL 273

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           T   + +  L  L  L+L  C  LTSLP  + +   L  L + GC  L +LP        
Sbjct: 274 TSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPN--ELGNL 331

Query: 184 STLPLLGVG----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
           +TL  L +     +  LP+ +  L+++  + +  C RL+++ + +  L  L S  I  C 
Sbjct: 332 TTLTSLNISRCQKLTSLPNELGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNISGCL 391

Query: 240 NL--------QFLEMPSCNIDGTRSKEQPSSEL---------KLKKCPRPESLPSGQCMF 282
            L          + + S N+ G        +EL          +  C +  SLP+     
Sbjct: 392 KLTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNISGCQKLTSLPNELGNL 451

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCS 341
            SLTS+ +  C   + LP+ELGNL +L  L I G   +  LP  LG L  L  L L  C 
Sbjct: 452 TSLTSINLRHCSRLKSLPNELGNLTSLTSLNISGCWELTSLPNELGNLTSLISLNLSRCW 511

Query: 342 ELEYISSSIFKLKSVES 358
           EL  + + +  L S+ S
Sbjct: 512 ELTSLPNKLSNLTSLTS 528


>gi|238481454|ref|NP_198822.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007123|gb|AED94506.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 968

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 226/443 (51%), Gaps = 40/443 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLL----KFCGSKNKCMVHSLEGVPFT--ELRYFEWHQF 54
           + +I+ E+ ++   F  M  LR L    K   S  K  +H  E   +   +L+   W ++
Sbjct: 346 VDEIDHELNVHEKAFQGMRNLRFLNIYTKALMSGQKIRLHLPENFDYLPPKLKLLCWDKY 405

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P++ L +    ENLV LKM  S++ +LW+ V +L  LK +DL+ SK L ++PDLS+A NL
Sbjct: 406 PMRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNL 465

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           + L+L YCSSL +  SSIQ LNKL  L+++ C +L +LP  I+ K L RL LRGCS L+ 
Sbjct: 466 KTLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGINLKSLHRLDLRGCSRLRM 525

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSS--IKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            P +++    S L L    IEE PS+  +K L ++    + S K  E +      ++ L 
Sbjct: 526 FPDISNN--ISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLS 583

Query: 232 SIRIHRCPNLQFLEMPS-----CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
                    L   ++PS     C I   +       EL +++C   ESLP+G   FK L 
Sbjct: 584 PPLAKNFNTLYLSDIPSLVELPCGIQNLKK----LMELSIRRCKNLESLPTG-ANFKYLD 638

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L++  C      PD    +     L ++ T I E+P  +     L+ L +  C++L+Y+
Sbjct: 639 YLDLSGCSKLRSFPDISSTISC---LCLNRTGIEEVPSWIENFVRLTYLTMLECNKLKYV 695

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCN----IDGSGIERIPSSVLKLNKCSKLESL 402
           S +IFKLK ++  + S+C  L    E+ +CN    +  +  + I   +L       +   
Sbjct: 696 SLNIFKLKHLDKADFSDCGTL---TEVSWCNKTISVAAATADNIQPKLL-------VSEA 745

Query: 403 PSSLCMFKSLTSLEIIDCKKLER 425
            SSLC+ KS+  +  I+C KL++
Sbjct: 746 SSSLCVQKSV--VRFINCFKLDQ 766



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 122/555 (21%), Positives = 214/555 (38%), Gaps = 97/555 (17%)

Query: 259 QPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIID 315
           +P + +KLK +    E L  G      L  +++    N + +PD     NL+ LN  +  
Sbjct: 415 RPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLN--LKY 472

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP- 374
            +++ ++   +  L  L+KL ++ C+ LE + + I  LKS+  +++  CS L+ FP+I  
Sbjct: 473 CSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDISN 531

Query: 375 ---FCNIDGSGIERIPS----------SVLKLNKCSKLESLPSSLCMFKSLT-------- 413
                 +D + IE  PS          S+ ++N     E +    C+ K L+        
Sbjct: 532 NISVLFLDKTSIEEFPSNLHLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAKNFN 591

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
           +L + D   L  LP  + NL+ L EL +                      ++C + ESLP
Sbjct: 592 TLYLSDIPSLVELPCGIQNLKKLMELSI----------------------RRCKNLESLP 629

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           +     K L  L++  C      PD    +     L +  T I EVP  +     L +L 
Sbjct: 630 TGANF-KYLDYLDLSGCSKLRSFPDISSTIS---CLCLNRTGIEEVPSWIENFVRLTYLT 685

Query: 534 LSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRI-PE 590
           + + N L+ +  ++ +L  L     S+   L  +          K + +     D I P+
Sbjct: 686 MLECNKLKYVSLNIFKLKHLDKADFSDCGTLTEVSW------CNKTISVAAATADNIQPK 739

Query: 591 YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG 650
            L S      S     +  V   NC KLD   L +             +  + KS+   G
Sbjct: 740 LLVS---EASSSLCVQKSVVRFINCFKLDQEALLQ-------------QEPVFKSLILGG 783

Query: 651 NEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLF 710
            E+P +F H++TG+++ +     +     +GF  C +V            ++        
Sbjct: 784 EEVPAYFNHRATGNSLVIPLVPTSISLDFLGFRACALVDVKAMSMPGRVDIQ-------- 835

Query: 711 DVVCDRRS---EGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCK-----RSDEFFFH 762
            V C  R      +DS   S+   ++  ++ H+ +    FA  N          D  F  
Sbjct: 836 -VSCRFRGSLKNHFDSADHSH-SLVAFHKASHLLIFDCRFALNNDSNPLNYAHMDITFHL 893

Query: 763 IDRSCCEVKKCGIHF 777
              S  ++  CGI F
Sbjct: 894 TTDSVSKINACGIRF 908


>gi|168032881|ref|XP_001768946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679858|gb|EDQ66300.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 549

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 162/556 (29%), Positives = 268/556 (48%), Gaps = 51/556 (9%)

Query: 93  IDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
           ID+ +   LT LP+ L    +L   D+G CSSLT   + +  L  L  L++  C SLTSL
Sbjct: 1   IDIGWCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTLNIQWCSSLTSL 60

Query: 152 PTSIHSKY-LKRLVLRGCSNLKNLPK-------MTSCHLRSTLPLLGVGIEELPSSIKCL 203
           P  + +   L  L +  CS+L +LP        +T+  +R         +  LP+ +  L
Sbjct: 61  PNELGNLISLTTLRMNECSSLTSLPNKLGNLTSLTTFDIRRC-----SSLTSLPNELGNL 115

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
           +++  L I  C  L ++ + +  L  L +  + RC +L    +P+  +D   S     + 
Sbjct: 116 TSLTTLNIEWCSSLTSLPNELGNLTDLTTFNMGRCSSLT--SLPN-ELDNLTSL----TT 168

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIREL 322
             + +C    SLP+      SLT+ ++  C +   LP+ELGNL +L    I G  ++  L
Sbjct: 169 FDIGRCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGCLSLTSL 228

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P   G L  L+  +++ CS L  + + +  L S+ +  I  CS+L   P           
Sbjct: 229 PNEFGNLTSLTTFDIRGCSSLTSLPNELGNLTSLTTFNIGRCSSLTSLPN---------E 279

Query: 383 IERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           +  + S +   + +CS L SLP+      SLT+ +I     L  LP+ELGNL +L    +
Sbjct: 280 LGNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWYSSLTSLPNELGNLMSLTTFDL 339

Query: 442 EG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
            G + +  +P  L  L +L+ L ++ CSS  SLP+ L    SLT+L +  C +   LP+E
Sbjct: 340 SGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNE 399

Query: 500 IGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKL 557
           +GNL  L ++ I   +++  +P  L  L+SL +L +   ++L  +P  L+ L+SL +L +
Sbjct: 400 LGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTYLNIQWYSSLISLPNELDNLTSLTTLNI 459

Query: 558 SN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR--LSVDLRN 614
              ++L  +P     L SL  L + E           S  TS+P+E  +L    + D++ 
Sbjct: 460 QWCSSLTSLPNESGNLISLTTLRMNE----------CSSLTSLPNELGNLTSLTTFDIQG 509

Query: 615 CLKLD--PNELSEIIK 628
           CL L   PNEL  +  
Sbjct: 510 CLSLTSLPNELGNLTS 525



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 230/462 (49%), Gaps = 25/462 (5%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL  +++++   LT LP+ L    +L   ++G CSSLT   + +  
Sbjct: 103 SSLTSLPNELGNLTSLTTLNIEWCSSLTSLPNELGNLTDLTTFNMGRCSSLTSLPNELDN 162

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLG- 190
           L  L   D+ RC SLTSLP    +   L    L GCS+L +LP ++ +    +T  + G 
Sbjct: 163 LTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGC 222

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           + +  LP+    L+++    I  C  L ++ + +  L  L +  I RC +L  L     N
Sbjct: 223 LSLTSLPNEFGNLTSLTTFDIRGCSSLTSLPNELGNLTSLTTFNIGRCSSLTSLPNELGN 282

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +    +         + +C    SLP+      SLT+ +I    +   LP+ELGNL +L 
Sbjct: 283 LTSLTT-------FDIGRCSSLTSLPNEFGNLTSLTTFDIQWYSSLTSLPNELGNLMSLT 335

Query: 311 RLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
              + G +++  LP  LG L  L+ L ++ CS L  + + +  L S+ ++ +  CS+L  
Sbjct: 336 TFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCSSLTL 395

Query: 370 FPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            P           +  + S +++ +  CS L SLP+ L    SLT L I     L  LP+
Sbjct: 396 LPN---------ELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTYLNIQWYSSLISLPN 446

Query: 429 ELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           EL NL +L  L ++  + +  +P     L +L+ L++ +CSS  SLP+ L    SLT+ +
Sbjct: 447 ELDNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFD 506

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLS 527
           I  C +   LP+E+GNL  L  L I+  +++  +P  LG L+
Sbjct: 507 IQGCLSLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLT 548



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 230/490 (46%), Gaps = 44/490 (8%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL+SL  + +     LT LP+ L    +L   D+  CSSLT   + +  
Sbjct: 55  SSLTSLPNELGNLISLTTLRMNECSSLTSLPNKLGNLTSLTTFDIRRCSSLTSLPNELGN 114

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L  L+++ C SLTSLP  + +   L    +  CS+L +LP        ++L    +G
Sbjct: 115 LTSLTTLNIEWCSSLTSLPNELGNLTDLTTFNMGRCSSLTSLPN--ELDNLTSLTTFDIG 172

Query: 193 ----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL---- 244
               +  LP+    L+++    +  C  L ++ + +  L  L +  I  C +L  L    
Sbjct: 173 RCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNEF 232

Query: 245 ----EMPSCNIDGTRSKEQPSSEL---------KLKKCPRPESLPSGQCMFKSLTSLEII 291
                + + +I G  S     +EL          + +C    SLP+      SLT+ +I 
Sbjct: 233 GNLTSLTTFDIRGCSSLTSLPNELGNLTSLTTFNIGRCSSLTSLPNELGNLTSLTTFDIG 292

Query: 292 DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
            C +   LP+E GNL +L    I   +++  LP  LG L  L+  +L   S L  + + +
Sbjct: 293 RCSSLTSLPNEFGNLTSLTTFDIQWYSSLTSLPNELGNLMSLTTFDLSGWSSLTSLPNEL 352

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMF 409
             L S+ ++ +  CS+L   P           +  + S + L +  CS L  LP+ L   
Sbjct: 353 GNLTSLTTLNMEYCSSLTSLPN---------ELGNLTSLTTLNMECCSSLTLLPNELGNL 403

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCS 467
            SLT ++I  C  L  LP+EL NL +L  L ++  + +  +P  L  L +L+ L ++ CS
Sbjct: 404 TSLTIIDIGWCSSLTSLPNELDNLTSLTYLNIQWYSSLISLPNELDNLTSLTTLNIQWCS 463

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQL 526
           S  SLP+      SLT+L + +C +   LP+E+GNL  L    I+G  ++  +P  LG L
Sbjct: 464 SLTSLPNESGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNL 523

Query: 527 SSL-----EW 531
           +SL     EW
Sbjct: 524 TSLTTLNIEW 533


>gi|30683875|ref|NP_849398.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658427|gb|AEE83827.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1404

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 181/673 (26%), Positives = 307/673 (45%), Gaps = 118/673 (17%)

Query: 35   VHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
            V   +G+ +  ++LR   W+  PLK L+     E LV L+M  S + +LWD  Q L  LK
Sbjct: 700  VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 759

Query: 92   RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
            ++ L+ SK L ++PDLSLA NLE +D+  C SL    SS+Q   KL  LD+  CK L S 
Sbjct: 760  QMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESF 819

Query: 152  PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
            PT ++ + L+ L L GC NL+N P +           +G    + P          E+++
Sbjct: 820  PTDLNLESLEYLNLTGCPNLRNFPAIK----------MGCSDVDFPEGRN------EIVV 863

Query: 212  YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCP 270
              C   +N+ +    L +L+ +   RC   +F               +P   + L  +C 
Sbjct: 864  EDCFWNKNLPAG---LDYLDCL--MRCMPCEF---------------RPEYLVFLNVRCY 903

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
            + E L  G     SL  +++ +  N   +PD L     L  L ++   ++  LP  +G L
Sbjct: 904  KHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCKSLVTLPSTIGNL 962

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIER 385
              L +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  ++ + IE 
Sbjct: 963  QKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEE 1021

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
            I    L L+K +KLE             SL + +CK L  LP  +GNL+ L         
Sbjct: 1022 I----LDLSKATKLE-------------SLILNNCKSLVTLPSTIGNLQNLR-------- 1056

Query: 446  IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
                          +L +K+C+  E LP+ + +S SL  L++  C +    P    N+ +
Sbjct: 1057 --------------RLYMKRCTGLEVLPTDVNLS-SLGILDLSGCSSLRTFPLISTNIVW 1101

Query: 506  LKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN----- 559
            L    ++ TAI EVP  +   + L  L++     L+ I  ++ +L SL+    ++     
Sbjct: 1102 L---YLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCRGVI 1158

Query: 560  ---NNLERIPERLDPLSSLKYLDLFENNLDRI-PEYLRSFPTSIPSEFTSLRLSVDLRNC 615
               ++   +    D +S +   +  E   +R   E        + +E+ S R      NC
Sbjct: 1159 KALSDATVVATMEDSVSCVPLSENIEYTCERFWGELYGDGDWDLGTEYFSFR------NC 1212

Query: 616  LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
             KLD +    I++  +            K +  PG EIPK+F +++ G ++++  P+ + 
Sbjct: 1213 FKLDRDARELILRSCF------------KPVALPGGEIPKYFTYRAYGDSLTVTLPRSSL 1260

Query: 676  YNKLMGFAFCVVV 688
                + F  C+VV
Sbjct: 1261 SQSFLRFKACLVV 1273


>gi|168068751|ref|XP_001786193.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661952|gb|EDQ48993.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 548

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 175/541 (32%), Positives = 281/541 (51%), Gaps = 39/541 (7%)

Query: 93  IDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
           +DL     L  LP+ +    +L  L+LG C SL     SI  LN L  LDL RC+SL +L
Sbjct: 1   LDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSLVDLDLFRCRSLKAL 60

Query: 152 PTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLG-VGIEELPSSIKCLSNIG 207
           P SI +   L +L L GC + + L +    +L S   L L G V ++ LP SI  L+++ 
Sbjct: 61  PESIGNLNSLVKLNLYGCRSFEALQESIG-NLNSLVDLNLYGCVSLKALPESIGNLNSLV 119

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHR-CPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
              +Y+C  L+ +  SI  L  L  + +   C +L+       N++          +L L
Sbjct: 120 YFDLYTCGSLKALPESIGNLNSLVKLNLGDFCKSLKAFPESIGNLNSLV-------KLNL 172

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEG 325
             C   E+LP       SL  L++  C + + LP+ +GNL     L + G  +++ LPE 
Sbjct: 173 YGCRSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGNLNPFVELRLYGCGSLKALPES 232

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           +G L LL KL L++C  LE +  SI  L S+  +++  C +LK  PE          I  
Sbjct: 233 IGNLNLLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALPE---------SIGN 283

Query: 386 IPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-G 443
           + S V L L  C  L++LP S+    SL  L++  C+ L+ LP  +GNL +L +L +   
Sbjct: 284 LNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSLVKLNLGVC 343

Query: 444 TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE-IG 501
             +  +P+S+  L +L KL L+ C S ++LP  +    SL  L +  C++   LP++ IG
Sbjct: 344 QSLEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPEKSIG 403

Query: 502 NLEYLKVLTIKG-TAIREVPESLGQLSSLE-WLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
           NL  L  L +    +++ +P+S+G L+SLE + + +  +L+ +PES+  L+SLV L L +
Sbjct: 404 NLNSLVELNLSACVSLKALPDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGD 463

Query: 560 -NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
             +LE +P+ +  L+SL  LDLF          L++ P SI +  + ++L  +LR+C  L
Sbjct: 464 CQSLEALPKSIHNLNSLVDLDLFR------CRSLKALPKSIGNLNSLVKL--NLRDCQSL 515

Query: 619 D 619
           +
Sbjct: 516 E 516



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 235/498 (47%), Gaps = 46/498 (9%)

Query: 35  VHSLEGVPFTELRYFEWHQFPLKTLNILHWENL---VSLK-MPGS--------------- 75
           ++SL  +     R FE  Q  +  LN L   NL   VSLK +P S               
Sbjct: 67  LNSLVKLNLYGCRSFEALQESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVYFDLYTC 126

Query: 76  -KVTQLWDDVQNLVSLKRIDL-KYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQ 132
             +  L + + NL SL +++L  + K L   P+ +    +L  L+L  C SL     SI 
Sbjct: 127 GSLKALPESIGNLNSLVKLNLGDFCKSLKAFPESIGNLNSLVKLNLYGCRSLEALPKSID 186

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG- 190
            LN L  LDL RC+SL +LP SI +      L L GC +LK LP+            L  
Sbjct: 187 NLNSLVDLDLFRCRSLKALPESIGNLNPFVELRLYGCGSLKALPESIGNLNLLVKLNLRD 246

Query: 191 -VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
              +E LP SI  L+++ +L +Y+C  L+ +  SI  L  L  + ++ C +L+ L     
Sbjct: 247 CQSLEALPESIDNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLYGCGSLKALPESIG 306

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           N++          +L L  C   ++LP       SL  L +  C + E LP+ +GNL +L
Sbjct: 307 NLNSLV-------DLDLNICRSLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNLNSL 359

Query: 310 NRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYI-SSSIFKLKSVESIEISNCSNL 367
            +L +    +++ LPE +G L  L KL L  C  LE +   SI  L S+  + +S C +L
Sbjct: 360 VKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPEKSIGNLNSLVELNLSACVSL 419

Query: 368 KGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           K  P+          I  + S     L  C  L++LP S+    SL  L + DC+ LE L
Sbjct: 420 KALPD---------SIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEAL 470

Query: 427 PDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           P  + NL +L +L +     ++ +PKS+  L +L KL L+ C S E+LP  +    SL  
Sbjct: 471 PKSIHNLNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVD 530

Query: 485 LEIIDCKNFMRLPDEIGN 502
           L++  C++   L + IGN
Sbjct: 531 LDLYTCRSLKALLESIGN 548


>gi|168032791|ref|XP_001768901.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679813|gb|EDQ66255.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 562

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 165/538 (30%), Positives = 263/538 (48%), Gaps = 51/538 (9%)

Query: 67  LVSLKMPGS-KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSL 124
           L + K+ G   +T L +++ NL SL  +++   + LT LP +L    +L  LDL  CSSL
Sbjct: 20  LTTFKINGCISLTSLPNELGNLTSLTTLNMNCCESLTSLPKELGNLTSLTTLDLSQCSSL 79

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPK-MTSCHL 182
           T   + +  L+ L  LD+  C SLTSLP  + +   L  L + GC +L +LPK + +   
Sbjct: 80  TSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISLTTLNISGCGSLTSLPKELGNLIS 139

Query: 183 RSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            +TL + G G +  LP+ +  L+++  L +  C+ L  +  +   L  L ++ ++ C +L
Sbjct: 140 LTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSLTLLPKNFGNLTSLTTLHMNGCISL 199

Query: 242 QFLE--------MPSCNIDGTRSKEQPSSE---------LKLKKCPRPESLPSGQCMFKS 284
           + L         + + NI+G  S     +E         L + +C    SLP+      S
Sbjct: 200 KSLPNELGNLTYLITLNINGCLSLPSLPNEFGNLTSLTTLYISECSSLMSLPNEFGNLIS 259

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSEL 343
           LT+L +  C +   LP+E GNL +L  L I G +++  LP  L  L  L+ L +  CS L
Sbjct: 260 LTTLYMQSCKSLSSLPNEFGNLTSLTTLYISGFSSLISLPNELSNLISLTILYINECSSL 319

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPE------------IPFCNIDGSGIERIPS--- 388
             +   +  L S+  + ++ C++L   P+            I +C      +  +P+   
Sbjct: 320 ISLPKELGNLTSLTILNMNGCTSLTSLPKELGNLISLTTLNIQWC----KSLISLPNELG 375

Query: 389 -----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                + LK+  C  L SLP+ L    SLTSL +  C  L  LP ELGN   L  L + G
Sbjct: 376 NLTSLTTLKMECCKGLTSLPNELGNLTSLTSLNMTGCLSLTSLPRELGNFTLLTILDMNG 435

Query: 444 -TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
              +  +PK L  L +L+ L ++ C S  SLP  L    SLT+L +  C +   LP+E+G
Sbjct: 436 CISLISLPKELGNLTSLTTLNMEWCKSLTSLPIELGNLTSLTTLNMNGCTSLKSLPNELG 495

Query: 502 NLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKL 557
           NL YL  L + G +++  +P  LG L SL  L +    +L  +P  L  L+SL +LK+
Sbjct: 496 NLTYLTTLNMNGCSSLTSLPNELGNLISLTTLNIQWCKSLISLPNELGNLTSLTTLKM 553



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 235/508 (46%), Gaps = 52/508 (10%)

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-M 177
           +  SLT     +  L  L    ++ C SLTSLP  + +   L  L +  C +L +LPK +
Sbjct: 3   WSKSLTSLPKELSNLIFLTTFKINGCISLTSLPNELGNLTSLTTLNMNCCESLTSLPKEL 62

Query: 178 TSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
            +    +TL L     +  LP+ +  LS++  L +  C  L ++   +  L  L ++ I 
Sbjct: 63  GNLTSLTTLDLSQCSSLTSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISLTTLNIS 122

Query: 237 RCPNL--------QFLEMPSCNIDGTRSKEQPSSE---------LKLKKCPRPESLPSGQ 279
            C +L          + + + NI G  S     +E         L + +C     LP   
Sbjct: 123 GCGSLTSLPKELGNLISLTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSLTLLPKNF 182

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELK 338
               SLT+L +  C + + LP+ELGNL  L  L I+G  ++  LP   G L  L+ L + 
Sbjct: 183 GNLTSLTTLHMNGCISLKSLPNELGNLTYLITLNINGCLSLPSLPNEFGNLTSLTTLYIS 242

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG------SGIERIPS---- 388
            CS L  + +    L S+ ++ + +C +L   P   F N+        SG   + S    
Sbjct: 243 ECSSLMSLPNEFGNLISLTTLYMQSCKSLSSLPN-EFGNLTSLTTLYISGFSSLISLPNE 301

Query: 389 -------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                  ++L +N+CS L SLP  L    SLT L +  C  L  LP ELGNL +L  L +
Sbjct: 302 LSNLISLTILYINECSSLISLPKELGNLTSLTILNMNGCTSLTSLPKELGNLISLTTLNI 361

Query: 442 EGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           +    +  +P  L  L +L+ LK++ C    SLP+ L    SLTSL +  C +   LP E
Sbjct: 362 QWCKSLISLPNELGNLTSLTTLKMECCKGLTSLPNELGNLTSLTSLNMTGCLSLTSLPRE 421

Query: 500 IGNLEYLKVLTIKG-TAIREVPESLGQLSSL-----EWLVLSDNNLQIIPESLNQLSSLV 553
           +GN   L +L + G  ++  +P+ LG L+SL     EW      +L  +P  L  L+SL 
Sbjct: 422 LGNFTLLTILDMNGCISLISLPKELGNLTSLTTLNMEWC----KSLTSLPIELGNLTSLT 477

Query: 554 SLKLSN-NNLERIPERLDPLSSLKYLDL 580
           +L ++   +L+ +P  L  L+ L  L++
Sbjct: 478 TLNMNGCTSLKSLPNELGNLTYLTTLNM 505



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 199/439 (45%), Gaps = 63/439 (14%)

Query: 67  LVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L +L + G   +T L  ++ NL+SL  +++     LT LP+ L    +L  L++  C SL
Sbjct: 116 LTTLNISGCGSLTSLPKELGNLISLTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSL 175

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------- 176
           T    +   L  L  L ++ C SL SLP  + +  YL  L + GC +L +LP        
Sbjct: 176 TLLPKNFGNLTSLTTLHMNGCISLKSLPNELGNLTYLITLNINGCLSLPSLPNEFGNLTS 235

Query: 177 -----MTSCHLRSTLP-----LLGV---------GIEELPSSIKCLSNIGELLIYSCKRL 217
                ++ C    +LP     L+ +          +  LP+    L+++  L I     L
Sbjct: 236 LTTLYISECSSLMSLPNEFGNLISLTTLYMQSCKSLSSLPNEFGNLTSLTTLYISGFSSL 295

Query: 218 ENISSSIFKLQFLESIRIHRC-------------PNLQFLEMPSCNIDGTRSKEQPS--- 261
            ++ + +  L  L  + I+ C              +L  L M  C    +  KE  +   
Sbjct: 296 ISLPNELSNLISLTILYINECSSLISLPKELGNLTSLTILNMNGCTSLTSLPKELGNLIS 355

Query: 262 -SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AI 319
            + L ++ C    SLP+      SLT+L++  C     LP+ELGNL +L  L + G  ++
Sbjct: 356 LTTLNIQWCKSLISLPNELGNLTSLTTLKMECCKGLTSLPNELGNLTSLTSLNMTGCLSL 415

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------E 372
             LP  LG   LL+ L++  C  L  +   +  L S+ ++ +  C +L   P        
Sbjct: 416 TSLPRELGNFTLLTILDMNGCISLISLPKELGNLTSLTTLNMEWCKSLTSLPIELGNLTS 475

Query: 373 IPFCNIDG-SGIERIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           +   N++G + ++ +P+        + L +N CS L SLP+ L    SLT+L I  CK L
Sbjct: 476 LTTLNMNGCTSLKSLPNELGNLTYLTTLNMNGCSSLTSLPNELGNLISLTTLNIQWCKSL 535

Query: 424 ERLPDELGNLEALEELRVE 442
             LP+ELGNL +L  L++E
Sbjct: 536 ISLPNELGNLTSLTTLKME 554



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 162/325 (49%), Gaps = 37/325 (11%)

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
           ++  LP+ L  L  L+  ++  C  L  + + +  L S+ ++ ++ C +L   P+     
Sbjct: 6   SLTSLPKELSNLIFLTTFKINGCISLTSLPNELGNLTSLTTLNMNCCESLTSLPK----- 60

Query: 378 IDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
                +  + S + L L++CS L SLP+ L    SLT+L++  C  L  LP ELGNL +L
Sbjct: 61  ----ELGNLTSLTTLDLSQCSSLTSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISL 116

Query: 437 EELRVEGTG-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
             L + G G +  +PK L  L +L+ L +  C S  SLP+ L    SLT+L + +C++  
Sbjct: 117 TTLNISGCGSLTSLPKELGNLISLTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSLT 176

Query: 495 RLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDN---NLQIIPESLNQLS 550
            LP   GNL  L  L + G  +++ +P  LG L+ L  + L+ N   +L  +P     L+
Sbjct: 177 LLPKNFGNLTSLTTLHMNGCISLKSLPNELGNLTYL--ITLNINGCLSLPSLPNEFGNLT 234

Query: 551 SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP--TSIPSEFTSL- 606
           SL +L +S  ++L  +P     L SL  L            Y++S    +S+P+EF +L 
Sbjct: 235 SLTTLYISECSSLMSLPNEFGNLISLTTL------------YMQSCKSLSSLPNEFGNLT 282

Query: 607 ---RLSVDLRNCLKLDPNELSEIIK 628
               L +   + L   PNELS +I 
Sbjct: 283 SLTTLYISGFSSLISLPNELSNLIS 307


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 221/457 (48%), Gaps = 71/457 (15%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFC--GSKNKCMVH----SLEGVPFTELRYFEWHQF 54
           +S ++  I +   TF+ M  LR L F   GS  +  +H     LE +P  ELRY  W +F
Sbjct: 545 VSMLSRHIHLKSDTFAMMDGLRFLNFDHDGSSQEYKMHLPPTGLEYLP-NELRYLRWDEF 603

Query: 55  PLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P K+L      E+LV L++P SK+ +LW  V+++ +L+ IDL  S  LT+LPDLS+A+NL
Sbjct: 604 PSKSLPPSFRAEHLVELRLPKSKLVRLWTGVKDVGNLRTIDLSESPYLTELPDLSMAKNL 663

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
             L LG C SLTE  SS+QYL+KLE +DL+RC +L S P  + SK L++L +  C +L  
Sbjct: 664 VCLRLGRCPSLTEVPSSLQYLDKLEEIDLNRCYNLRSFPM-LDSKVLRKLSIGLCLDLTT 722

Query: 174 LPKMT------------------------------SCHLRSTLPLLGVGIE--------- 194
            P ++                               C   +  P +   IE         
Sbjct: 723 CPTISQNMVCLRLEQTSIKEVPQSVTGKLKVLDLNGCSKMTKFPEISGDIEQLRLSGTIK 782

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-----FLESIRIHRCPNLQFLEMPS- 248
           E+PSSI+ L+ +  L +  C +LE+       ++     FL    I   P++ F  M S 
Sbjct: 783 EMPSSIQFLTRLEMLDMSGCSKLESFPEITVPMESLRYLFLSKTGIKEIPSISFKHMTSL 842

Query: 249 --CNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
              N+DGT  KE PSS        EL L  C + ES P      KSL  L +      + 
Sbjct: 843 NTLNLDGTPLKELPSSIQFLTRLYELNLSGCSKLESFPEITVPMKSLEVLNLSKT-GIKE 901

Query: 299 LPDEL-GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           +P  L  +L +L  L +DGT I+ LPE     +LL KL  ++C+ LE  + SI    S+ 
Sbjct: 902 IPSSLIKHLISLRCLNLDGTPIKALPE---LPSLLRKLTTRDCASLE-TTISIINFSSLW 957

Query: 358 -SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
             ++ +NC  L   P +   ++     E IP   +++
Sbjct: 958 FGLDFTNCFKLDQKPLVAVMHLKIQSGEEIPDGSIQM 994



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 229/494 (46%), Gaps = 63/494 (12%)

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            ++GNL+ ++  + +   + ELP+ L     L  L L  C  L  + SS+  L  +E I++
Sbjct: 636  DVGNLRTID--LSESPYLTELPD-LSMAKNLVCLRLGRCPSLTEVPSSLQYLDKLEEIDL 692

Query: 362  SNCSNLKGFP----------EIPFCNIDGSGIERIPSSV--LKLNKCSKLESLPSSLCMF 409
            + C NL+ FP           I  C +D +    I  ++  L+L + S ++ +P S+   
Sbjct: 693  NRCYNLRSFPMLDSKVLRKLSIGLC-LDLTTCPTISQNMVCLRLEQTS-IKEVPQSVT-- 748

Query: 410  KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS 468
              L  L++  C K+ + P+  G++E   +LR+ GT I+E+P S+  L  L  L +  CS 
Sbjct: 749  GKLKVLDLNGCSKMTKFPEISGDIE---QLRLSGT-IKEMPSSIQFLTRLEMLDMSGCSK 804

Query: 469  FESLPSRLYVSKSLTSLEIIDCKNFMRLPD-EIGNLEYLKVLTIKGTAIREVPESLGQLS 527
             ES P      +SL  L  +       +P     ++  L  L + GT ++E+P S+  L+
Sbjct: 805  LESFPEITVPMESLRYL-FLSKTGIKEIPSISFKHMTSLNTLNLDGTPLKELPSSIQFLT 863

Query: 528  SLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERL-DPLSSLKYLDLFENNL 585
             L  L LS  + L+  PE    + SL  L LS   ++ IP  L   L SL+ L+L    +
Sbjct: 864  RLYELNLSGCSKLESFPEITVPMKSLEVLNLSKTGIKEIPSSLIKHLISLRCLNLDGTPI 923

Query: 586  DRIPEY---LR--------SFPTSIPS-EFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK 633
              +PE    LR        S  T+I    F+SL   +D  NC KLD   L  ++      
Sbjct: 924  KALPELPSLLRKLTTRDCASLETTISIINFSSLWFGLDFTNCFKLDQKPLVAVMH----L 979

Query: 634  QSVNGETYITKS--MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
            +  +GE     S  M  PG+EIP+WF  +  GS+++++   P+  ++L G AFC+V    
Sbjct: 980  KIQSGEEIPDGSIQMVLPGSEIPEWFGDKGVGSSLTIQL--PSNCHQLKGIAFCLVFLLP 1037

Query: 692  VSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSI-FAGE 750
            +        V+DD +  +F          +D +  S  G+  H  +D V  GS + FA  
Sbjct: 1038 LPSQDMPCEVDDDSQVLVF----------FDYHVKSKNGE--HDGNDEVVFGSRLRFALL 1085

Query: 751  NSCKR--SDEFFFH 762
             S K   SD    H
Sbjct: 1086 FSLKTCDSDHMILH 1099


>gi|168068753|ref|XP_001786194.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661953|gb|EDQ48994.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 517

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 168/522 (32%), Positives = 258/522 (49%), Gaps = 29/522 (5%)

Query: 43  FTELRYFEWHQFPLKTLNILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLL 101
             +L  F          +I +  + V L++ G   +  L + + NL SL +++L   + L
Sbjct: 14  LVDLDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLNSLVKLNLGDCQSL 73

Query: 102 TKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
             LP  +    +L  LDL  C S+     SI  LN L  L+L  C+SL +L  SI +   
Sbjct: 74  EALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESIGNLNS 133

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVG-IEELPSSIKCLSNIGELLIYSCKR 216
           L  L L GC +LK LP+    +L S   L L   G ++ LP SI  L+++ +L +  C+ 
Sbjct: 134 LVELNLYGCVSLKALPESIG-NLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQS 192

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           LE +  SI  L  L  + + RC +L+ L     N++          +L L  C   E+L 
Sbjct: 193 LEALLKSIGNLNSLVDLDLFRCRSLKALPESIANLNSLV-------KLNLYGCRSLEALQ 245

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKL 335
                  SL  L +  C + + L D +GNL +L    +    +++ LPE +G L  L KL
Sbjct: 246 ESIGNLNSLVELNLSACVSLKALRDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKL 305

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLN 394
            L  C  LE +  SI  L S+  + +  C +LK  PE          I  + S V L L 
Sbjct: 306 NLGVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPE---------SIGNLNSLVDLDLY 356

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
            C  L++LP S+    SL  L + DC+ LE LP  +GNL +L +LRV  + ++ + +S+ 
Sbjct: 357 TCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLLDLRVCKS-LKALRESIG 415

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L +L KL L  C S E+LP  +    SL  L +  C +   LP+ IGNL  L  L +  
Sbjct: 416 NLNSLVKLNLYGCRSLEALPESIGNLISLVDLNLYGCVSLKALPESIGNLNSLVDLDLNT 475

Query: 514 -TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLV 553
             +++ +PES+G L+SL  L L D  +L+ +P+S++ L+SLV
Sbjct: 476 CGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSLV 517



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 167/512 (32%), Positives = 253/512 (49%), Gaps = 46/512 (8%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           LDL  C SL     SI  LN    L L  C SL +LP SI +   L +L L  C +L+ L
Sbjct: 17  LDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLNSLVKLNLGDCQSLEAL 76

Query: 175 PKMTSCHLRSTLPL---LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           PK    +L S + L   +   ++ LP SI  L+++ +L +Y C+ LE +S SI  L  L 
Sbjct: 77  PKSIG-NLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESIGNLNSLV 135

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRS---------KEQPSS--------ELKLKKCPRPES 274
            + ++ C +L+ L     N++             K  P S        +L L  C   E+
Sbjct: 136 ELNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEA 195

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLS 333
           L        SL  L++  C + + LP+ + NL +L +L + G  ++  L E +G L  L 
Sbjct: 196 LLKSIGNLNSLVDLDLFRCRSLKALPESIANLNSLVKLNLYGCRSLEALQESIGNLNSLV 255

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LK 392
           +L L  C  L+ +  SI  L S+E  ++  C +LK  PE          I  + S V L 
Sbjct: 256 ELNLSACVSLKALRDSIGNLNSLEDFDLYTCGSLKALPE---------SIGNLNSLVKLN 306

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPK 451
           L  C  LE+LP S+    SL  L +  C  L+ LP+ +GNL +L +L +   G ++ +P+
Sbjct: 307 LGVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALPE 366

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           S+  L +L KL L  C S E+LP  +    SL  L +  CK+   L + IGNL  L  L 
Sbjct: 367 SIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLLDLRV--CKSLKALRESIGNLNSLVKLN 424

Query: 511 IKGT-AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           + G  ++  +PES+G L SL  L L    +L+ +PES+  L+SLV L L+   +L+ +PE
Sbjct: 425 LYGCRSLEALPESIGNLISLVDLNLYGCVSLKALPESIGNLNSLVDLDLNTCGSLKALPE 484

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
            +  L+SL  L+L +       + L + P SI
Sbjct: 485 SIGNLNSLVKLNLGD------CQSLEALPKSI 510



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 217/429 (50%), Gaps = 37/429 (8%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           ++ LP SI  L+++ +L ++ C+ L+ +  SI  L     +R++ C +L+ L     N++
Sbjct: 1   LKALPESIGNLNSLVDLDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLN 60

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
                     +L L  C   E+LP       SL  L++  C + + LP+ +GNL +L +L
Sbjct: 61  SLV-------KLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKL 113

Query: 313 IIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            + G  ++  L E +G L  L +L L  C  L+ +  SI  L S+  +++  C +LK  P
Sbjct: 114 NLYGCRSLEALSESIGNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALP 173

Query: 372 E--------IPFCNIDGSGIERIPSSVLKLN--------KCSKLESLPSSLCMFKSLTSL 415
           E        +     D   +E +  S+  LN        +C  L++LP S+    SL  L
Sbjct: 174 ESIGNLNSLVKLNLGDCQSLEALLKSIGNLNSLVDLDLFRCRSLKALPESIANLNSLVKL 233

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            +  C+ LE L + +GNL +L EL +     ++ +  S+  L +L    L  C S ++LP
Sbjct: 234 NLYGCRSLEALQESIGNLNSLVELNLSACVSLKALRDSIGNLNSLEDFDLYTCGSLKALP 293

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL 532
             +    SL  L +  C++   LP+ IGNL  L  L + G  +++ +PES+G L+SL  L
Sbjct: 294 ESIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDL 353

Query: 533 VL-SDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L +  +L+ +PES+  L+SLV L L +  +LE +P+ +  L+SL  LDL      R+ +
Sbjct: 354 DLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSL--LDL------RVCK 405

Query: 591 YLRSFPTSI 599
            L++   SI
Sbjct: 406 SLKALRESI 414



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 189/398 (47%), Gaps = 54/398 (13%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG------ 316
           +L L +C   ++LP       S   L +  C + + LP+ +GNL +L +L +        
Sbjct: 16  DLDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLNSLVKLNLGDCQSLEA 75

Query: 317 -------------------TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
                               +++ LPE +G L  L KL L  C  LE +S SI  L S+ 
Sbjct: 76  LPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESIGNLNSLV 135

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLE 416
            + +  C +LK  PE          I  + S V L L  C  L++LP S+    SL  L 
Sbjct: 136 ELNLYGCVSLKALPE---------SIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLN 186

Query: 417 IIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
           + DC+ LE L   +GNL +L +L +     ++ +P+S+A L +L KL L  C S E+L  
Sbjct: 187 LGDCQSLEALLKSIGNLNSLVDLDLFRCRSLKALPESIANLNSLVKLNLYGCRSLEALQE 246

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLV 533
            +    SL  L +  C +   L D IGNL  L+   +    +++ +PES+G L+SL  L 
Sbjct: 247 SIGNLNSLVELNLSACVSLKALRDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLN 306

Query: 534 LSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
           L    +L+ +PES+  L+SLV L L    +L+ +PE +  L+SL  LDL+   +L  +PE
Sbjct: 307 LGVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALPE 366

Query: 591 YLRSFPT-------------SIPSEFTSLRLSVDLRNC 615
            + +  +             ++P    +L   +DLR C
Sbjct: 367 SIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLLDLRVC 404


>gi|296090591|emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 150/454 (33%), Positives = 224/454 (49%), Gaps = 57/454 (12%)

Query: 42  PFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
           P  +LRY  WH++PLK+L +  H +NLV L +    V +LW  V+++  L+ IDL +S+ 
Sbjct: 38  PSNKLRYLYWHRYPLKSLPSNFHPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSHSQY 97

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
           L + PD S   NLE L    C+ L E H S+  L+KL  L+L  CK+L   P+SI  + L
Sbjct: 98  LVRTPDFSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESL 157

Query: 161 KRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           K L+L GCS L   P++   +L + L L   G  I ELPSSI   + +  L +  CKR +
Sbjct: 158 KVLILSGCSKLDKFPEILG-YLPNLLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFK 216

Query: 219 NISSSIFKLQFLESIRIHRCPNL----QFLE----MPSCNIDGTRSKEQPSSE------- 263
           ++   I+KL+ L+ +++  C       + LE    +    +DGT  KE P S        
Sbjct: 217 SLPCCIYKLKSLKILKLSGCAKFESFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLV 276

Query: 264 -LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
            L L+ C R  +LPS  C  KSL++L +  C   E+LP+ LGNL+ L  L+ DG+A+ + 
Sbjct: 277 LLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQP 336

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +  L  L  L  + C+      SS +  +    + +   S+  GF            
Sbjct: 337 PSSIVLLRNLKVLSFQGCNG---SPSSRWNSRFWSMLCLRRISDSTGF------------ 381

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK-KLERLPDELGN-LEALEELR 440
             R+PS               S LC   SL  L + DC  K   LP++LG  L +LE L 
Sbjct: 382 --RLPSL--------------SGLC---SLKQLNLSDCNIKEGALPNDLGGYLSSLEYLN 422

Query: 441 VEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
           ++G     +P  +++L  L  L L  C   + LP
Sbjct: 423 LKGNDFVTLPTGISKLCNLKALYLGCCKRLQELP 456



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 263/571 (46%), Gaps = 107/571 (18%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   +  PS     +SL  L +  C   ++ P+ LG L  L  L ++GTAI ELP
Sbjct: 137 LNLKDCKNLQCFPS-SIELESLKVLILSGCSKLDKFPEILGYLPNLLELHLNGTAITELP 195

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFC 376
             +G    L  L++++C   + +   I+KLKS++ +++S C+  + FPEI          
Sbjct: 196 SSIGYATQLVSLDMEDCKRFKSLPCCIYKLKSLKILKLSGCAKFESFPEILENMEGLREL 255

Query: 377 NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            +DG+ I+ +P SV        L L  C +L +LPSS+C  KSL++L +  C +LE+LP+
Sbjct: 256 FLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEKLPE 315

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK--SLTSLE 486
            LGNLE L EL  +G+ + + P S+  + L  LK+         PS  + S+  S+  L 
Sbjct: 316 NLGNLECLVELVADGSAVIQPPSSI--VLLRNLKVLSFQGCNGSPSSRWNSRFWSMLCLR 373

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESL-GQLSSLEWLVLSDNNLQIIP 543
            I      RLP  +  L  LK L +    I+E  +P  L G LSSLE+L L  N+   +P
Sbjct: 374 RISDSTGFRLP-SLSGLCSLKQLNLSDCNIKEGALPNDLGGYLSSLEYLNLKGNDFVTLP 432

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEF 603
             +++L +L +L L                 L+ L +   N++RI               
Sbjct: 433 TGISKLCNLKALYLGC------------CKRLQELPMLPPNINRI--------------- 465

Query: 604 TSLRLSVDLRNCLKLDPNELSEIIKDGWM------KQSVNGETYITK-------SMYFPG 650
                  + +NC  L+   LS +    W+      +Q+   ETY+ +       + Y PG
Sbjct: 466 -------NAQNCTSLE--TLSGLSAPCWLAFTNSFRQNWGQETYLAEVSRIPKFNTYLPG 516

Query: 651 NEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA------CSVSEC-CRHESVED 703
           N IP+WFR+Q  G +I ++ P     +  +GFA C+V A      CS     C  ES + 
Sbjct: 517 NGIPEWFRNQCMGDSIMVQLPSHWYNDNFLGFAMCIVFALKEPNQCSRGAMLCELESSDL 576

Query: 704 DRK---CNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFF 760
           D     C L  +V +  S+G D +          VESDH++LG   +      K+ D  +
Sbjct: 577 DPSNLGCFLDHIVWEGHSDG-DGF----------VESDHLWLG---YHPNFPIKKDDMDW 622

Query: 761 ----FHIDRSCC------EVKKCGIHFVHAQ 781
                HI  S        EVK CG   V+ +
Sbjct: 623 PNKLSHIKASFVIAGIPHEVKWCGFRLVYME 653



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 20/169 (11%)

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           PK+L +L L       C   E L   +   + L  +++   +  +R PD  G +  L+ L
Sbjct: 61  PKNLVELNLC------CCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSG-IPNLERL 113

Query: 510 TIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
             +G T +REV +SLG LS L +L L D  NLQ  P S+ +L SL  L LS  + L++ P
Sbjct: 114 IFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSI-ELESLKVLILSGCSKLDKFP 172

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
           E L  L +L  L L   N   I E     P+SI   + +  +S+D+ +C
Sbjct: 173 EILGYLPNLLELHL---NGTAITE----LPSSI--GYATQLVSLDMEDC 212


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 151/456 (33%), Positives = 220/456 (48%), Gaps = 48/456 (10%)

Query: 8   IQINPYTFSKMTELRLLKFCGSK--------NKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
           I I   +F  MT LRLLK   +         NK  +      P  ELRY  WH +PL++L
Sbjct: 551 IDITTKSFEMMTRLRLLKIYWAHGSISIREDNKVKLSKDFEFPSYELRYLYWHGYPLESL 610

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILD 117
            +  + E+L+ L M  S + QLW+  + L  L  I + +S+ L ++PD S+ A NLE L 
Sbjct: 611 PSSFYAEDLIELDMCYSSLKQLWESDEPLEKLNTIRVSFSQHLMEIPDFSVRAPNLEKLI 670

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L  CSSL E H SI  L K+ VL+L  CK L+S P+    + L+ L   GCS LK  P +
Sbjct: 671 LDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFPSITDMEALEILNFAGCSELKKFPDI 730

Query: 178 TSCHLRSTLPLL--GVGIEELPSSI-KCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
             C++   L L      IEELPSSI + ++ +  L +  CK L ++ + IFKL+ LE + 
Sbjct: 731 -QCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKLKSLEYLF 789

Query: 235 IHRCPNLQ-FLE-------MPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSG 278
           +  C  L+ F E       +    +DGT  +  PSS         L L+KC +  SLP  
Sbjct: 790 LSGCSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVSLPDS 849

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            C  +SL ++ +  C   ++LP  +G+LQ L +L  DGTAIR+ P+ +  L  L  L   
Sbjct: 850 MCNLRSLQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRGLRVLIYP 909

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS- 397
            C  L   S S      +     SN   L+  P  P             SS+  LN+ S 
Sbjct: 910 GCKILPSSSLSSLFSFWLLHGRGSNGIGLR-LPSFPCL-----------SSLTNLNQSSC 957

Query: 398 -----KLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                   S+P+S+    +L  L +  C+ L  +P+
Sbjct: 958 NPSRNNFLSIPTSISALTNLRDLWLGQCQNLTEIPE 993



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 166/590 (28%), Positives = 261/590 (44%), Gaps = 119/590 (20%)

Query: 287  SLEIIDCPNFE-RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
            S  +++ P+F  R P+       L +LI+DG +++ E+   +G+L  +  L LKNC +L 
Sbjct: 650  SQHLMEIPDFSVRAPN-------LEKLILDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLS 702

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--------GSGIERIPSSV------ 390
               S I  ++++E +  + CS LK FP+I  CN++         + IE +PSS+      
Sbjct: 703  SFPS-ITDMEALEILNFAGCSELKKFPDIQ-CNMEHLLKLYLSSTAIEELPSSIGQHITG 760

Query: 391  ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
               L L +C  L SLP+ +   KSL  L +  C KLE  P+ + ++E L+EL ++GT I 
Sbjct: 761  LVLLDLKRCKNLTSLPTCIFKLKSLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIE 820

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             +P S+ +L  L  L L+KC    SLP  +   +SL ++ +  C    +LP  +G+L++L
Sbjct: 821  VLPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQLPKNVGSLQHL 880

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVL-----------------------SDNNLQIIP 543
              L   GTAIR+ P+S+  L  L  L+                          N + +  
Sbjct: 881  VQLHADGTAIRQPPDSIVLLRGLRVLIYPGCKILPSSSLSSLFSFWLLHGRGSNGIGLRL 940

Query: 544  ESLNQLSSLVSLKLSN-----NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPT 597
             S   LSSL +L  S+     NN   IP  +  L++L+ L L +  NL  IPE   S P 
Sbjct: 941  PSFPCLSSLTNLNQSSCNPSRNNFLSIPTSISALTNLRDLWLGQCQNLTEIPELPPSVPD 1000

Query: 598  SIPSEFTSLR-----------LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY----- 641
                + TSL            L      CLK    + ++  +D   +   N  ++     
Sbjct: 1001 INSRDCTSLSLSSSSISMLQWLQFLFYYCLKPVEEQFNDDKRDALQRFPDNLVSFSCSEP 1060

Query: 642  ---------------ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCV 686
                           +  SM  PG+ IPKW  H++ GS + +K P     +  +GFA C 
Sbjct: 1061 SPSNFAVVKQKFFENVAFSMILPGSGIPKWIWHRNMGSFVKVKLPTDWYDDDFLGFAVCS 1120

Query: 687  VVACSVSECCRHESVEDDRKCNLFDVVCDR---RSEGYDSYTSSYLGKISHVESDHVFLG 743
            V+          E V D   C+L     D    R  G+D +      K S V S+HV+LG
Sbjct: 1121 VL----------EHVPDRIVCHLSPDTLDYGELRDFGHDFHC-----KGSDVSSEHVWLG 1165

Query: 744  SSIFAGENSCKRSD-------EFFFHI-----DRSCCEVKKCGIHFVHAQ 781
                A     + +D       E  F        R+   VK+CG+  ++A+
Sbjct: 1166 YQPCAQLRMFQVNDPNEWSHMEISFEATHRLSSRASNMVKECGVRLIYAE 1215


>gi|227438125|gb|ACP30552.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1346

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 206/741 (27%), Positives = 328/741 (44%), Gaps = 107/741 (14%)

Query: 2    SKINSEIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPFTELRYFEWHQF 54
            S++   + +N  +F  M  L  LK         G    C+      +P  +LR   W ++
Sbjct: 369  SELEEALFVNEESFKGMRNLTFLKVYKEWSRESGEGRLCLPRGYVYLP-RKLRLLYWDEY 427

Query: 55   PLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
            PL  ++     E LV L M  SK+ +LWD VQ L SLK+I L  S  L ++PDLS A NL
Sbjct: 428  PLTFMHFNFRAEILVKLTMENSKLEKLWDGVQPLRSLKKIRLDGSTKLKEIPDLSNAINL 487

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            E L+L  C+SL    SSI+ LNKL  + ++ C  + +LPT+I+   L  L L GCS L+ 
Sbjct: 488  EKLNLWGCTSLMTLPSSIKNLNKLRKVSMEGCTKIEALPTNINLGCLDYLNLGGCSRLRR 547

Query: 174  LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI--FKLQFLE 231
             P+++     S L L G  I++  SS   L N     IY   +L+    S+    L F  
Sbjct: 548  FPQISQN--ISGLILDGTSIDDEESSY--LEN-----IYGLTKLDWNGCSMRSMPLDF-- 596

Query: 232  SIRIHRCPNLQFLEMPSCNI----DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
                 R  NL +L M    +    DG +S       L L  C      P       +L  
Sbjct: 597  -----RSENLVYLTMRGSTLVKLWDGVQSLGNL-VRLDLSGCENLNFFPD-LSEATTLDH 649

Query: 288  LEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE-- 344
            LE+ DC +   LP  + NL+ L RL + G T ++ LP  +  L  L  L+L  CS L+  
Sbjct: 650  LELNDCKSLVVLPSSIQNLKKLTRLEMQGCTKLKVLPTDV-NLESLKYLDLIGCSNLKSF 708

Query: 345  -YISSSI--FKLKSVESIEISNC---SNLKGFPEI------------PFC-------NID 379
              IS ++    L      E  +C    N+ G  E+             FC       ++ 
Sbjct: 709  PRISRNVSELYLNGTAIEEDKDCFFIGNMHGLTELVWSYCSMKYLPSSFCAESLVKFSVP 768

Query: 380  GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
            GS +E++   +        + L+ C  L+ +P  L    SL  L++ DCK L  LP  + 
Sbjct: 769  GSKLEKLWEGIQSLGSLRTIDLSGCQSLKEIP-DLSTATSLEYLDLTDCKSLVMLPSSIR 827

Query: 432  NLEALEELRVEG-TGIREVPKSLAQLALSK-LKLKKCSSFESLPSRLYVSKSLTSLEIID 489
            NL+ L +L++EG TG+  +P  +  ++L++   L  CS   S P    +S S+  L  +D
Sbjct: 828  NLKKLVDLKMEGCTGLEVLPNDVNLVSLNQYFNLSGCSRLRSFPQ---ISTSIVYLH-LD 883

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                  +P  I N+  L  LT++G   +++V  +  +L SL  +  S        E +  
Sbjct: 884  YTAIEEVPSWIENISGLSTLTMRGCKKLKKVASNSFKLKSLLDIDFSS------CEGVRT 937

Query: 549  LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD-RIPEYLRSFPTSIPSEFTSLR 607
             S   S+  SNN      E   P++      L  + +  +    LRS   S  +  + L+
Sbjct: 938  FSDDASVVTSNN------EAHQPVTEEATFHLGHSTISAKNRASLRSVSPSFFNPMSCLK 991

Query: 608  LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
                 +NC  LD +    I++ G+            K    PG E+  +FR Q+ G++++
Sbjct: 992  ----FQNCFNLDQDARKLILQSGF------------KHAVLPGKEVHPYFRDQACGTSLT 1035

Query: 668  LKTPQPTGYNKLMGFAFCVVV 688
            +   + +   + + F  C+++
Sbjct: 1036 ISLHESSLSLQFLQFKACILL 1056


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 168/542 (30%), Positives = 272/542 (50%), Gaps = 82/542 (15%)

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEY 345
            S  +++CPN    P        +  LI+DG T++ E+   + +L  L+ L +KNC +L Y
Sbjct: 636  SQHLMECPNLSFAP-------RVELLILDGCTSLPEVHPSVTKLKRLTILNMKNCKKLHY 688

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEIPFCN-------IDGSGIERIPSSV-------- 390
              S I  L+S++ + +S CS L  FPEI           +DG+ ++ +P S+        
Sbjct: 689  FPS-ITGLESLKVLNLSGCSKLDKFPEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQL 747

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L KC  L SLP+S+C  +SL +L +  C KL +LP++LG L+ L +L+ +GT I + P
Sbjct: 748  LNLRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPP 807

Query: 451  KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSL---EIIDCKNFMRLPDEIGNLEYL 506
             SL  L  L +L  + C   +   S  ++S  L  L   E  D    ++LP  +  L  L
Sbjct: 808  LSLFHLRNLKELSFRGC---KGSTSNSWISSLLFRLLHRENSDGTG-LQLP-YLSGLYSL 862

Query: 507  KVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLE 563
            K L + G  +  R + ++LG LS LE L LS NNL  +P  +N+LS L  L ++   +L+
Sbjct: 863  KYLDLSGCNLTDRSINDNLGHLSFLEELNLSRNNLVTVPAEVNRLSHLRVLSVNQCKSLQ 922

Query: 564  RIPERLDPLSSLKYLDLFE-NNLDRI-------PEYLRSFPTSIPSEFTSLRLSVDLRNC 615
             I  +L P  S+K LD  +  +L+ +       P+YL S     P  F        L NC
Sbjct: 923  EI-SKLPP--SIKLLDAGDCISLESLSVLSPQSPQYLSSSSCLRPVTFK-------LPNC 972

Query: 616  LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
              L  +  + I++   ++Q+   E  I  S+  PG+ IP+WF+H S GS+++++ P P  
Sbjct: 973  FALAQDNGATILEK--LRQNFLPE--IEYSIVLPGSTIPEWFQHPSIGSSVTIELP-PNW 1027

Query: 676  YNK-LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVC---DRRSEGYDSYTSSYLGK 731
            +NK  +GFA C V            S+E+D       +VC   + R   Y S + S+   
Sbjct: 1028 HNKDFLGFALCSVF-----------SLEEDEIIQGSGLVCCNFEFREGPYLSSSISWTHS 1076

Query: 732  ISHV-ESDHVFL----GSSIFAGENSCK---RSDEFFFHIDRSCCEVKKCGIHFVHAQRQ 783
               V E+DH++L    G+ +   ++S     R    +F +  +   VK CGIH ++A+ +
Sbjct: 1077 GDRVIETDHIWLVYQPGAKLMIPKSSSLNKFRKITAYFSLSGASHVVKNCGIHLIYARDK 1136

Query: 784  RL 785
            ++
Sbjct: 1137 KV 1138



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 219/508 (43%), Gaps = 114/508 (22%)

Query: 4   INSEIQINPYTFSKMTELRLLK-FCGSKNKCMVHSLEGVPFT------ELRYFEWHQFPL 56
           +++EI +    F KMT LRLL+ +   +N  +V +   +P        ELRY  W  + L
Sbjct: 534 VSNEIHLTSDAFKKMTRLRLLRVYQNVENNSIVSNTVHLPHDFKFPSHELRYLHWDGWTL 593

Query: 57  KTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           ++L  N   W+ LV L +  S +  LW   + L  L+ I+L  S+ L + P+LS A  +E
Sbjct: 594 ESLPSNFDGWK-LVELSLKHSSLKHLWKKRKCLPKLEVINLGNSQHLMECPNLSFAPRVE 652

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
           +L L  C+SL E H S+  L +L +L++  CK L   P+    + LK L L GCS L   
Sbjct: 653 LLILDGCTSLPEVHPSVTKLKRLTILNMKNCKKLHYFPSITGLESLKVLNLSGCSKLDKF 712

Query: 175 PK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           P+ M        L L G  ++ELP SI  +  +  L +  CK L ++ +SI  L+ LE++
Sbjct: 713 PEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSLRSLETL 772

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            +  C                          KL K P                       
Sbjct: 773 IVSGCS-------------------------KLSKLP----------------------- 784

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC---SELEYISSSI 350
                  ++LG LQ L +L  DGTAI + P  L  L  L +L  + C   +   +ISS +
Sbjct: 785 -------EDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRGCKGSTSNSWISSLL 837

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
           F+L   E                   N DG+G++                 LP  L    
Sbjct: 838 FRLLHRE-------------------NSDGTGLQ-----------------LP-YLSGLY 860

Query: 411 SLTSLEIIDCKKLER-LPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS 468
           SL  L++  C   +R + D LG+L  LEEL +    +  VP  + +L+ L  L + +C S
Sbjct: 861 SLKYLDLSGCNLTDRSINDNLGHLSFLEELNLSRNNLVTVPAEVNRLSHLRVLSVNQCKS 920

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            +       +SK   S++++D  + + L
Sbjct: 921 LQE------ISKLPPSIKLLDAGDCISL 942


>gi|168005341|ref|XP_001755369.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693497|gb|EDQ79849.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 555

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 254/545 (46%), Gaps = 68/545 (12%)

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------------MTSC 180
           +  L++L+L  CK L SLPTSI S  YLK   + GCSNL +LP             ++ C
Sbjct: 1   MTSLKILNLKDCKQLHSLPTSIGSLLYLKNFNISGCSNLTSLPNELGNLISLTYFDVSWC 60

Query: 181 HLRSTLP--------LLGVGIE------ELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
              +TLP        L+   I        LP+    L+++   +I  C  L ++ + +  
Sbjct: 61  SSLTTLPNELGNLRSLITFDIRICSSLTSLPNEFGNLTSLTTFIIRGCSSLTSLPNELGN 120

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L  L    +  C +L  L     N+          +   +K C    SLP+      SLT
Sbjct: 121 LISLTYFDVSWCSSLTSLPNELGNLTSL-------TTFIIKGCSGLTSLPNELRNLTSLT 173

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEY 345
           + ++  C +   LP+ELGNL +L   II G +++  LP  LG L  L+K ++  CS L  
Sbjct: 174 TFDVSRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISECSSLTS 233

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPE--------IPFCNIDGSGIERIPS--------S 389
           + + +  L S+ + +IS CS+L   P           F   + S +  +P+        +
Sbjct: 234 LPNELDNLTSLTTFDISECSSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGNLTSLT 293

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIRE 448
           +  + +CS L SLP+ L    SLT  +I +C +L  L +ELGNL +L    +     +  
Sbjct: 294 IFFIRRCSSLTSLPNELGNLTSLTKFDISECSRLTSLSNELGNLTSLTTFFIRRCLSLTS 353

Query: 449 VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P  L  L +L+   +  CSS  SLP++L    SLT+  +  C     LP+E+GNL  L 
Sbjct: 354 LPNELGNLISLTYFDVSWCSSLISLPNKLSNLTSLTTFIVKGCSGLTLLPNELGNLTSLT 413

Query: 508 VLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLER 564
              I + +++  +P  LG L+SL   ++   ++L  +P  L  L+SL    +S  ++L  
Sbjct: 414 TFDISRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLTSLTKFDISECSSLTS 473

Query: 565 IPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PN 621
           +P  L  L+SL   D+ E + L  +P  L +  TS+ + F        +R C  L   PN
Sbjct: 474 LPNELGNLTSLTKFDISECSRLTSLPNELGNL-TSLTTFF--------IRRCSSLTSLPN 524

Query: 622 ELSEI 626
           EL  +
Sbjct: 525 ELGNL 529



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 230/487 (47%), Gaps = 47/487 (9%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL   D++    LT LP+      +L    +  CSSLT   + +  
Sbjct: 61  SSLTTLPNELGNLRSLITFDIRICSSLTSLPNEFGNLTSLTTFIIRGCSSLTSLPNELGN 120

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L   D+  C SLTSLP  + +   L   +++GCS L +LP      LR+   L    
Sbjct: 121 LISLTYFDVSWCSSLTSLPNELGNLTSLTTFIIKGCSGLTSLPN----ELRNLTSLTTFD 176

Query: 193 IE------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
           +        LP+ +  L+++   +I  C  L ++ + +  L  L    I  C +L    +
Sbjct: 177 VSRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISECSSLT--SL 234

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           P+  +D   S     +   + +C    SLP+      SLT+ +I +C +   LP+ELGNL
Sbjct: 235 PN-ELDNLTSL----TTFDISECSSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGNL 289

Query: 307 QALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +L    I   +++  LP  LG L  L+K ++  CS L  +S+ +  L S+ +  I  C 
Sbjct: 290 TSLTIFFIRRCSSLTSLPNELGNLTSLTKFDISECSRLTSLSNELGNLTSLTTFFIRRCL 349

Query: 366 NLKGFP------------EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSS 405
           +L   P            ++ +C    S +  +P+ +  L          CS L  LP+ 
Sbjct: 350 SLTSLPNELGNLISLTYFDVSWC----SSLISLPNKLSNLTSLTTFIVKGCSGLTLLPNE 405

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKL 463
           L    SLT+ +I  C  L  LP+ELGNL +L    + G + +  +P  L  L +L+K  +
Sbjct: 406 LGNLTSLTTFDISRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLTSLTKFDI 465

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPES 522
            +CSS  SLP+ L    SLT  +I +C     LP+E+GNL  L    I+  +++  +P  
Sbjct: 466 SECSSLTSLPNELGNLTSLTKFDISECSRLTSLPNELGNLTSLTTFFIRRCSSLTSLPNE 525

Query: 523 LGQLSSL 529
           LG L+SL
Sbjct: 526 LGNLTSL 532



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 212/475 (44%), Gaps = 74/475 (15%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL+SL   D+ +   LT LP+ L    +L    +  CS LT   + ++ 
Sbjct: 109 SSLTSLPNELGNLISLTYFDVSWCSSLTSLPNELGNLTSLTTFIIKGCSGLTSLPNELRN 168

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------------MTSC 180
           L  L   D+ RC SLTSLP  + +   L   ++RGCS+L +LP             ++ C
Sbjct: 169 LTSLTTFDVSRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISEC 228

Query: 181 HLRSTLP--------LLGVGIEE------LPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
              ++LP        L    I E      LP+ +  L+++    I  C  L ++ + +  
Sbjct: 229 SSLTSLPNELDNLTSLTTFDISECSSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGN 288

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L  L    I RC +L  L     N+          ++  + +C R  SL +      SLT
Sbjct: 289 LTSLTIFFIRRCSSLTSLPNELGNLTSL-------TKFDISECSRLTSLSNELGNLTSLT 341

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEY 345
           +  I  C +   LP+ELGNL +L    +   +++  LP  L  L  L+   +K CS L  
Sbjct: 342 TFFIRRCLSLTSLPNELGNLISLTYFDVSWCSSLISLPNKLSNLTSLTTFIVKGCSGLTL 401

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPE--------IPFCNIDGSGIERIPSSV------- 390
           + + +  L S+ + +IS CS+L   P           F     S +  +P+ +       
Sbjct: 402 LPNELGNLTSLTTFDISRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLTSLT 461

Query: 391 -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
              +++CS L SLP+ L    SLT  +I +C +L  LP+ELGNL +L    +        
Sbjct: 462 KFDISECSSLTSLPNELGNLTSLTKFDISECSRLTSLPNELGNLTSLTTFFI-------- 513

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
                         ++CSS  SLP+ L    SLT+ +I +C     LP++ GNL+
Sbjct: 514 --------------RRCSSLTSLPNELGNLTSLTTFDICECTRLTSLPNKFGNLK 554


>gi|302818895|ref|XP_002991120.1| hypothetical protein SELMODRAFT_132799 [Selaginella moellendorffii]
 gi|300141214|gb|EFJ07928.1| hypothetical protein SELMODRAFT_132799 [Selaginella moellendorffii]
          Length = 550

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 165/520 (31%), Positives = 252/520 (48%), Gaps = 39/520 (7%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLE 114
           LK L+ LH  N  SL+        L D +  LV L+ + L     +T+LP  L    +LE
Sbjct: 22  LKWLHSLHMHNCHSLR-------ALPDSIGGLVMLQELVLSVCTSITELPQSLGNLHDLE 74

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKN 173
            +DL  C  L     SI  L  L+V+DL  C+SLTSLP  I   + L+ LVL GC +LK 
Sbjct: 75  YVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRNLRELVLAGCGSLKE 134

Query: 174 LPKMTSCHLRSTLPLLGVGIEE------LPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
           LP      + S   L  + +        LP  I  L+ + EL +  C++L  +   +  L
Sbjct: 135 LPP----EIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWCEKLAALPPQVGFL 190

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
             L  + +  C NL   E+P      T  K      L L+ C   + LP      KSL  
Sbjct: 191 HELTDLELSDCKNLP--ELPV-----TIGKLSCLKRLHLRGCAHLKVLPPEIGGLKSLRC 243

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYI 346
           L + +C +   L    G+L +L  L + G +++ ELP G+  ++ L +L  + C+ L+ +
Sbjct: 244 LSLAECVSLTTLAVPRGSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKAL 303

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
              + +L  ++++ +  CS LK   E+P      S +ER     L L KC  L SLPS +
Sbjct: 304 PPQVGELTRLQALYLQQCSTLK---ELPPQIGKLSMLER-----LDLKKCGGLTSLPSEI 355

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLK 464
            M   L  L +  C  +++LP E+G++ +L EL +EG T ++ +P  + QL +L  L L 
Sbjct: 356 GMLSRLKFLHLNACTGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLD 415

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESL 523
            C+   SLP+ +   +SL  L +  C     LP E+G L  LK+L + G T++ EVP  L
Sbjct: 416 GCTGLASLPADVGNLESLKRLSLAKCAALEGLPREVGRLPKLKLLRLDGCTSMSEVPAEL 475

Query: 524 GQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNL 562
           G + +L  L L    +L  IP  + +L +L  L L    L
Sbjct: 476 GHVQTLVNLGLEGCTSLSSIPPGIFRLPNLELLDLRRCTL 515



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 238/517 (46%), Gaps = 62/517 (11%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           L+L  C  L E   SI  L  L  L +  C SL +LP SI     L+ LVL  C+++  L
Sbjct: 4   LELDNCVKLVELPRSIGSLKWLHSLHMHNCHSLRALPDSIGGLVMLQELVLSVCTSITEL 63

Query: 175 PK------------MTSCHLRSTLP-----LLGVGIEE---------LPSSIKCLSNIGE 208
           P+            + +C     LP     L+ + + +         LP  I  L N+ E
Sbjct: 64  PQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRNLRE 123

Query: 209 LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK 268
           L++  C  L+ +   I  L  L ++ +  C  L  L     N+ G R       EL +  
Sbjct: 124 LVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLR-------ELNMMW 176

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLG 327
           C +  +LP        LT LE+ DC N   LP  +G L  L RL + G A ++ LP  +G
Sbjct: 177 CEKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIG 236

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER-- 385
            L  L  L L  C  L  ++     L S+E +++  CS+L    E+P      S +ER  
Sbjct: 237 GLKSLRCLSLAECVSLTTLAVPRGSLASLEILDLVGCSSLT---ELPAGVAGMSSLERLN 293

Query: 386 ---------IPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                    +P  V        L L +CS L+ LP  +     L  L++  C  L  LP 
Sbjct: 294 CRECTALKALPPQVGELTRLQALYLQQCSTLKELPPQIGKLSMLERLDLKKCGGLTSLPS 353

Query: 429 ELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           E+G L  L+ L +   TGI+++P  +  + +L +L L+ C+S + LP+++   +SL +L 
Sbjct: 354 EIGMLSRLKFLHLNACTGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLG 413

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPE 544
           +  C     LP ++GNLE LK L++ K  A+  +P  +G+L  L+ L L    ++  +P 
Sbjct: 414 LDGCTGLASLPADVGNLESLKRLSLAKCAALEGLPREVGRLPKLKLLRLDGCTSMSEVPA 473

Query: 545 SLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
            L  + +LV+L L    +L  IP  +  L +L+ LDL
Sbjct: 474 ELGHVQTLVNLGLEGCTSLSSIPPGIFRLPNLELLDL 510



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 168/364 (46%), Gaps = 46/364 (12%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID-GTAIRE 321
           EL+L  C +   LP      K L SL + +C +   LPD +G L  L  L++   T+I E
Sbjct: 3   ELELDNCVKLVELPRSIGSLKWLHSLHMHNCHSLRALPDSIGGLVMLQELVLSVCTSITE 62

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP---------- 371
           LP+ LG L  L  ++L  C +L  +  SI +L +++ ++++ C +L   P          
Sbjct: 63  LPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRNLR 122

Query: 372 -----------EIP--------FCNIDGSGIER---IPSSV--------LKLNKCSKLES 401
                      E+P          N+D S  E+   +P  +        L +  C KL +
Sbjct: 123 ELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWCEKLAA 182

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQL-ALS 459
           LP  +     LT LE+ DCK L  LP  +G L  L+ L + G   ++ +P  +  L +L 
Sbjct: 183 LPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGGLKSLR 242

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIRE 518
            L L +C S  +L        SL  L+++ C +   LP  +  +  L+ L  +  TA++ 
Sbjct: 243 CLSLAECVSLTTLAVPRGSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKA 302

Query: 519 VPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLK 576
           +P  +G+L+ L+ L L   + L+ +P  + +LS L  L L     L  +P  +  LS LK
Sbjct: 303 LPPQVGELTRLQALYLQQCSTLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLK 362

Query: 577 YLDL 580
           +L L
Sbjct: 363 FLHL 366



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 153/320 (47%), Gaps = 23/320 (7%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL--PDLSLAQNL 113
           L  L  LH      LK+       L  ++  L SL+ + L     LT L  P  SLA +L
Sbjct: 214 LSCLKRLHLRGCAHLKV-------LPPEIGGLKSLRCLSLAECVSLTTLAVPRGSLA-SL 265

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLK 172
           EILDL  CSSLTE  + +  ++ LE L+   C +L +LP  +     L+ L L+ CS LK
Sbjct: 266 EILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKALPPQVGELTRLQALYLQQCSTLK 325

Query: 173 NLPKMT---SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
            LP      S   R  L   G G+  LPS I  LS +  L + +C  ++ + + +  ++ 
Sbjct: 326 ELPPQIGKLSMLERLDLKKCG-GLTSLPSEIGMLSRLKFLHLNACTGIKQLPAEVGDMRS 384

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L  + +  C +L+ L      +   RS E     L L  C    SLP+     +SL  L 
Sbjct: 385 LVELGLEGCTSLKGL---PAQVGQLRSLEN----LGLDGCTGLASLPADVGNLESLKRLS 437

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +  C   E LP E+G L  L  L +DG T++ E+P  LG +  L  L L+ C+ L  I  
Sbjct: 438 LAKCAALEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIPP 497

Query: 349 SIFKLKSVESIEISNCSNLK 368
            IF+L ++E +++  C+ L 
Sbjct: 498 GIFRLPNLELLDLRRCTLLA 517


>gi|224151169|ref|XP_002337069.1| predicted protein [Populus trichocarpa]
 gi|222837951|gb|EEE76316.1| predicted protein [Populus trichocarpa]
          Length = 468

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 224/469 (47%), Gaps = 58/469 (12%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           L+LG+CS L     SI  L  L +LDL+ C  LTSLP SI   KYLK L L  C      
Sbjct: 1   LNLGHCSKLASLPDSIGKLKCLAMLDLNYCSKLTSLPDSIGELKYLKELKLHHC------ 54

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
                           + +  LP SI  L ++ EL  Y C +L ++  SI +L+ L  + 
Sbjct: 55  ----------------LELASLPDSIGKLKSLAELDFYYCLKLASLPDSIGELKCLPRLD 98

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           +      +   +P      +  K +   EL L  C +  SLP      K L  L +  C 
Sbjct: 99  LELLLKTKLASLPD-----SIGKLKSLVELHLGYCSKLASLPESIGKLKCLVMLNLHHCS 153

Query: 295 NFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              RLPD +G L+ L +L ++  + +  LP  +G+L  L++L L +CS+L  + +SI +L
Sbjct: 154 ELTRLPDSIGELKCLVKLDLNSCSKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGEL 213

Query: 354 KSVESIEISNCSNLKGFPE------IPF------CNIDGSG-----IERIPSSV------ 390
           K + ++++++CS L   P+      +P       C +D S      + R+P S+      
Sbjct: 214 KCLGTLDLNSCSKLASLPDSIELASLPNSIGKLKCLVDASSWLLLKLARLPKSIGKLKCL 273

Query: 391 --LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IR 447
             L LN CS+L  LP S+   KSL  L +  C KL  LPD +G L+ L  L +     + 
Sbjct: 274 VMLHLNHCSELACLPDSIGKLKSLVELHLSYCSKLAWLPDSIGELKCLVTLNLHHCSELA 333

Query: 448 EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            +P S+ +L  L  L L  CS   SLP+ +   KSL  L +  C     LP+ IG L+ L
Sbjct: 334 RLPDSIGELKCLVMLDLNSCSKLASLPNSIGKLKSLAELNLSSCSKLASLPNSIGELKCL 393

Query: 507 KVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLV 553
             L +   + +  +P+S+G+L SL  L LS  + L  +P  + +L SL 
Sbjct: 394 GTLNLNCCSELASLPDSIGELKSLVELHLSSCSKLACLPNRIGKLKSLA 442



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 214/463 (46%), Gaps = 59/463 (12%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           SK+  L D +  L  L  +DL Y   LT LPD +   + L+ L L +C  L     SI  
Sbjct: 7   SKLASLPDSIGKLKCLAMLDLNYCSKLTSLPDSIGELKYLKELKLHHCLELASLPDSIGK 66

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
           L  L  LD   C  L SLP SI               LK LP++    L  T       +
Sbjct: 67  LKSLAELDFYYCLKLASLPDSI-------------GELKCLPRLDLELLLKT------KL 107

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF---------- 243
             LP SI  L ++ EL +  C +L ++  SI KL+ L  + +H C  L            
Sbjct: 108 ASLPDSIGKLKSLVELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGELKC 167

Query: 244 ---LEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
              L++ SC    ++  +  K +  +EL L  C +  SLP+     K L +L++  C   
Sbjct: 168 LVKLDLNSCSKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDLNSCSKL 227

Query: 297 ERLPD--ELGNL-QALNRL--IIDGTA-----IRELPEGLGQLALLSKLELKNCSELEYI 346
             LPD  EL +L  ++ +L  ++D ++     +  LP+ +G+L  L  L L +CSEL  +
Sbjct: 228 ASLPDSIELASLPNSIGKLKCLVDASSWLLLKLARLPKSIGKLKCLVMLHLNHCSELACL 287

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSS 405
             SI KLKS+  + +S CS L   P+          I  +   V L L+ CS+L  LP S
Sbjct: 288 PDSIGKLKSLVELHLSYCSKLAWLPD---------SIGELKCLVTLNLHHCSELARLPDS 338

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKL 463
           +   K L  L++  C KL  LP+ +G L++L EL +   + +  +P S+ +L  L  L L
Sbjct: 339 IGELKCLVMLDLNSCSKLASLPNSIGKLKSLAELNLSSCSKLASLPNSIGELKCLGTLNL 398

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             CS   SLP  +   KSL  L +  C     LP+ IG L+ L
Sbjct: 399 NCCSELASLPDSIGELKSLVELHLSSCSKLACLPNRIGKLKSL 441



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 178/382 (46%), Gaps = 61/382 (15%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           +K+  L D +  L SL  + L Y   L  LP+ +   + L +L+L +CS LT    SI  
Sbjct: 105 TKLASLPDSIGKLKSLVELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGE 164

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------------MTSC 180
           L  L  LDL+ C  L SLP SI   K L  L L  CS L +LP             + SC
Sbjct: 165 LKCLVKLDLNSCSKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDLNSC 224

Query: 181 HLRSTLPLLGVGIEELPSSI---KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
              ++LP   + +  LP+SI   KCL +    L+    +L  +  SI KL+ L  + ++ 
Sbjct: 225 SKLASLPD-SIELASLPNSIGKLKCLVDASSWLLL---KLARLPKSIGKLKCLVMLHLNH 280

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C  L  L                           P+S+  G+   KSL  L +  C    
Sbjct: 281 CSELACL---------------------------PDSI--GK--LKSLVELHLSYCSKLA 309

Query: 298 RLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LPD +G L+ L  L +   + +  LP+ +G+L  L  L+L +CS+L  + +SI KLKS+
Sbjct: 310 WLPDSIGELKCLVTLNLHHCSELARLPDSIGELKCLVMLDLNSCSKLASLPNSIGKLKSL 369

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             + +S+CS L   P     N  G   E      L LN CS+L SLP S+   KSL  L 
Sbjct: 370 AELNLSSCSKLASLP-----NSIG---ELKCLGTLNLNCCSELASLPDSIGELKSLVELH 421

Query: 417 IIDCKKLERLPDELGNLEALEE 438
           +  C KL  LP+ +G L++L E
Sbjct: 422 LSSCSKLACLPNRIGKLKSLAE 443



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 30/323 (9%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           L +  C     LPD +G L+ L  L ++  + +  LP+ +G+L  L +L+L +C EL  +
Sbjct: 1   LNLGHCSKLASLPDSIGKLKCLAMLDLNYCSKLTSLPDSIGELKYLKELKLHHCLELASL 60

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG-IERIPSSVLKLNKCSKLESLPSS 405
             SI KLKS+  ++   C  L   P       D  G ++ +P   L+L   +KL SLP S
Sbjct: 61  PDSIGKLKSLAELDFYYCLKLASLP-------DSIGELKCLPRLDLELLLKTKLASLPDS 113

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQL-ALSKLKL 463
           +   KSL  L +  C KL  LP+ +G L+ L  L +     +  +P S+ +L  L KL L
Sbjct: 114 IGKLKSLVELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGELKCLVKLDL 173

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-------- 515
             CS   SLP+ +   KSL  L +  C     LP+ IG L+ L  L +   +        
Sbjct: 174 NSCSKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDLNSCSKLASLPDS 233

Query: 516 --IREVPESLGQLSSL----EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
             +  +P S+G+L  L     WL+L    L  +P+S+ +L  LV L L++ + L  +P+ 
Sbjct: 234 IELASLPNSIGKLKCLVDASSWLLL---KLARLPKSIGKLKCLVMLHLNHCSELACLPDS 290

Query: 569 LDPLSSLKYLDL-FENNLDRIPE 590
           +  L SL  L L + + L  +P+
Sbjct: 291 IGKLKSLVELHLSYCSKLAWLPD 313



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 41/198 (20%)

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREV 519
           L L  CS   SLP  +   K L  L++  C     LPD IG L+YLK L +     +  +
Sbjct: 1   LNLGHCSKLASLPDSIGKLKCLAMLDLNYCSKLTSLPDSIGELKYLKELKLHHCLELASL 60

Query: 520 PESLGQLSSLEWL---------------------------VLSDNNLQIIPESLNQLSSL 552
           P+S+G+L SL  L                           +L    L  +P+S+ +L SL
Sbjct: 61  PDSIGKLKSLAELDFYYCLKLASLPDSIGELKCLPRLDLELLLKTKLASLPDSIGKLKSL 120

Query: 553 VSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
           V L L   + L  +PE +  L  L  L+L   + L R+P+ +      +          +
Sbjct: 121 VELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGELKCLV---------KL 171

Query: 611 DLRNCLKLD--PNELSEI 626
           DL +C KL   PN + ++
Sbjct: 172 DLNSCSKLASLPNSIGKL 189


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 179/343 (52%), Gaps = 37/343 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFC----GSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
           E+ ++P  F +M +L+ LKF       K   +   LE +P  +L  F+W  +PLK+L   
Sbjct: 556 ELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLP-NDLLLFQWVSYPLKSLPQS 614

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV LK+  S+V +LWD +QN+  LK+IDL YSK L  LPD S A NLE ++L  C
Sbjct: 615 FCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSKASNLEEIELFGC 674

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL   H SI  LNKL  L+L  CK+LTSL +  H + L+ L L GCS L++   +TS +
Sbjct: 675 KSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLSGCSRLEDFS-VTSDN 733

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           ++  L L    I ELPSSI  L N+  L +  CK L  + + +  L+ L ++ +H C  L
Sbjct: 734 MKD-LALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQL 792

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
                              +S L +        L SG     SL +L++ +C N   +PD
Sbjct: 793 D------------------ASNLHI--------LLSG---LASLETLKLEECRNLSEIPD 823

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            +  L +L  L++  T I   P  +  L+ L KL++K C  L+
Sbjct: 824 NISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQ 866



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 195/461 (42%), Gaps = 117/461 (25%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLAL 331
           +SLP   C  ++L  L++      E+L D + N+Q L ++ +  +  + +LP+   + + 
Sbjct: 609 KSLPQSFCA-ENLVELKLT-WSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPD-FSKASN 665

Query: 332 LSKLELKNCSELEYISSSIFKL-----------------------KSVESIEISNCSNLK 368
           L ++EL  C  L  +  SI +L                       +S+  + +S CS L+
Sbjct: 666 LEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLSGCSRLE 725

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            F      ++    ++ +  S   +N+      LPSS+   K+L +L +  CK L +LP+
Sbjct: 726 DF------SVTSDNMKDLALSSTAINE------LPSSIGSLKNLETLTLDFCKSLNKLPN 773

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           E+ +L +L  L V G           QL  S L +        L S L    SL +L++ 
Sbjct: 774 EVIDLRSLRALYVHGC---------TQLDASNLHI--------LLSGL---ASLETLKLE 813

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLN 547
           +C+N   +PD I  L  L+ L +K T I   P S+  LS LE L V     LQ +PE   
Sbjct: 814 ECRNLSEIPDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQNMPE--- 870

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
                                L P  SLK  +L+  +   +   + ++  S   +  + +
Sbjct: 871 ---------------------LPP--SLK--ELYATDCSSLETVMFNWNASDLLQLQAYK 905

Query: 608 LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY------------------FP 649
           L    +NC+ LD   L  I         VN +  + K  Y                  +P
Sbjct: 906 LHTQFQNCVNLDELSLRAI--------EVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYP 957

Query: 650 GNEIPKWFRHQSTGSTISLK-TPQPTGYNKLMGFAFCVVVA 689
           G+++P+W  +++T +++++  +  P   +K +GF FCVV  
Sbjct: 958 GSKVPEWLMYRTTEASVTVDFSSAPK--SKFVGFIFCVVAG 996


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 179/343 (52%), Gaps = 37/343 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFC----GSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
           E+ ++P  F +M +L+ LKF       K   +   LE +P  +L  F+W  +PLK+L   
Sbjct: 393 ELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLP-NDLLLFQWVSYPLKSLPQS 451

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV LK+  S+V +LWD +QN+  LK+IDL YSK L  LPD S A NLE ++L  C
Sbjct: 452 FCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSKASNLEEIELFGC 511

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL   H SI  LNKL  L+L  CK+LTSL +  H + L+ L L GCS L++   +TS +
Sbjct: 512 KSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLSGCSRLEDF-SVTSDN 570

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           ++  L L    I ELPSSI  L N+  L +  CK L  + + +  L+ L ++ +H C  L
Sbjct: 571 MKD-LALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQL 629

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
                              +S L +        L SG     SL +L++ +C N   +PD
Sbjct: 630 D------------------ASNLHI--------LLSG---LASLETLKLEECRNLSEIPD 660

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            +  L +L  L++  T I   P  +  L+ L KL++K C  L+
Sbjct: 661 NISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQ 703



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 193/460 (41%), Gaps = 115/460 (25%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLAL 331
           +SLP   C  ++L  L++      E+L D + N+Q L ++ +  +  + +LP+   + + 
Sbjct: 446 KSLPQSFCA-ENLVELKLT-WSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPD-FSKASN 502

Query: 332 LSKLELKNCSELEYISSSIFKL-----------------------KSVESIEISNCSNLK 368
           L ++EL  C  L  +  SI +L                       +S+  + +S CS L+
Sbjct: 503 LEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLSGCSRLE 562

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            F      ++    ++ +  S   +N+      LPSS+   K+L +L +  CK L +LP+
Sbjct: 563 DF------SVTSDNMKDLALSSTAINE------LPSSIGSLKNLETLTLDFCKSLNKLPN 610

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           E+ +L +L  L V G           QL  S L +        L S L    SL +L++ 
Sbjct: 611 EVIDLRSLRALYVHGC---------TQLDASNLHI--------LLSGL---ASLETLKLE 650

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLN 547
           +C+N   +PD I  L  L+ L +K T I   P S+  LS LE L V     LQ +PE   
Sbjct: 651 ECRNLSEIPDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQNMPE--- 707

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
                                L P  SLK  +L+  +   +   + ++  S   +  + +
Sbjct: 708 ---------------------LPP--SLK--ELYATDCSSLETVMFNWNASDLLQLQAYK 742

Query: 608 LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY------------------FP 649
           L    +NC+ LD   L  I         VN +  + K  Y                  +P
Sbjct: 743 LHTQFQNCVNLDELSLRAI--------EVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYP 794

Query: 650 GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           G+++P+W  +++T +++++        +K +GF FCVV  
Sbjct: 795 GSKVPEWLMYRTTEASVTVDFSSAPK-SKFVGFIFCVVAG 833


>gi|147862986|emb|CAN78790.1| hypothetical protein VITISV_027418 [Vitis vinifera]
          Length = 1617

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 227/468 (48%), Gaps = 75/468 (16%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
             S  +++CPN    P        L  LI+DG T++ E+   + +L  L+ L +KNC  L 
Sbjct: 1151 NSQHLLECPNLSSAP-------CLELLILDGCTSLLEVHPPVTKLKRLTILNMKNCKMLH 1203

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV------- 390
            +  S I  L+S++ + +S CS L  FPEI          N++G+ I  +P SV       
Sbjct: 1204 HFPS-ITGLESLKVLNLSGCSKLDKFPEIQGYMECLVELNLEGTAIVELPFSVVFLPRLV 1262

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
             L +  C  L  LPS++   K L +L +  C  LER P+ +  +E L++L ++G  I+E+
Sbjct: 1263 LLDMQNCKNLTILPSNIYSLKFLGTLVLSGCSGLERFPEIMEVMECLQKLLLDGISIKEL 1322

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY--- 505
            P S+  L  L  L L+KC + +SLP+ +   +SL +L +  C    +LP+E+G L +   
Sbjct: 1323 PPSIVHLKGLQSLSLRKCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEELGRLLHREN 1382

Query: 506  ----------------LKVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
                            LK L + G  +  R + ++LG L  LE L LS NNL  IPE +N
Sbjct: 1383 SDGIGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTIPEEVN 1442

Query: 548  QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI-------PEYLRSFPTSI 599
            +LS L  L ++     R   +L P  S+K LD  +  +L+ +       P+YL S     
Sbjct: 1443 RLSHLRVLSVNQCKRLREISKLPP--SIKLLDAGDCISLESLSVLSPQSPQYLSSSSRLH 1500

Query: 600  PSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
            P  F        L NC  L  + ++ I++    K   N    I  S+  PG+ IP+WF+H
Sbjct: 1501 PVTFK-------LTNCFALAQDNVATILE----KLHQNFLPEIEYSIVLPGSTIPEWFQH 1549

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSE--------CCRHE 699
             S GS+++++ P+     + +GFA C V++    E        CC  E
Sbjct: 1550 PSIGSSVTIELPRNWHNEEFLGFAXCCVLSLEEDEIIQGPGLICCNFE 1597



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 198/401 (49%), Gaps = 37/401 (9%)

Query: 46   LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
            LRY  W  + L++L +    + LV L +  S + QLW + + L  L+ I+L  S+ L + 
Sbjct: 1099 LRYLHWDGWTLESLPSNFDGKKLVGLSLKHSSIKQLWKEHKCLPKLEVINLGNSQHLLEC 1158

Query: 105  PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
            P+LS A  LE+L L  C+SL E H  +  L +L +L++  CK L   P+    + LK L 
Sbjct: 1159 PNLSSAPCLELLILDGCTSLLEVHPPVTKLKRLTILNMKNCKMLHHFPSITGLESLKVLN 1218

Query: 165  LRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L GCS L   P++         L L G  I ELP S+  L  +  L + +CK L  + S+
Sbjct: 1219 LSGCSKLDKFPEIQGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTILPSN 1278

Query: 224  IFKLQFLESIRIHRCPNL----QFLEMPSC----NIDGTRSKEQPSS--------ELKLK 267
            I+ L+FL ++ +  C  L    + +E+  C     +DG   KE P S         L L+
Sbjct: 1279 IYSLKFLGTLVLSGCSGLERFPEIMEVMECLQKLLLDGISIKELPPSIVHLKGLQSLSLR 1338

Query: 268  KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
            KC   +SLP+  C  +SL +L +  C    +LP+ELG L  L+R   DG  + +LP  L 
Sbjct: 1339 KCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEELGRL--LHRENSDGIGL-QLPY-LS 1394

Query: 328  QLALLSKLELKNCSELEY-ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
             L  L  L+L  C+  +  I+ ++  L+ +E + +S  +NL   PE          + R+
Sbjct: 1395 GLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSR-NNLVTIPE---------EVNRL 1444

Query: 387  PS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
                VL +N+C +L  +     +  S+  L+  DC  LE L
Sbjct: 1445 SHLRVLSVNQCKRLREISK---LPPSIKLLDAGDCISLESL 1482


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 210/762 (27%), Positives = 328/762 (43%), Gaps = 159/762 (20%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILH 63
            SEI I   +F+ M +LRLL+     N  +   L+ +P +EL++ +W  FPL+ L  +IL 
Sbjct: 762  SEITIPVESFAPMKKLRLLQI---NNVELEGDLKLLP-SELKWIQWKGFPLENLPPDILS 817

Query: 64   WE-NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +  ++ L   G +  +     +   +LK ++L+    L  +PDLS    LE L L  C+
Sbjct: 818  RQLGVLDLSESGVRRVKTLPRKRGDENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCN 877

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH 181
             L +   S+  L KL  LDL RC SL+     +   K L++  L GCSNL  LP+     
Sbjct: 878  LLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPE----- 932

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                     +G      S+ CL      L+     + N+  SIF+LQ LE + +  C ++
Sbjct: 933  --------NIG------SMPCLKE----LLLDGTAISNLPYSIFRLQKLEKLSLMGCRSI 974

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
            +  E+PSC    T  ++    +  L+      +LPS     K+L  L ++ C +   +P+
Sbjct: 975  E--ELPSCVGYLTSLEDLYLDDTALR------NLPSSIGDLKNLQKLHLMRCTSLSTIPE 1026

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
             +  L +L  L I+G+A+ ELP   G L  L+ L   +C  L+ + SSI  L S+  ++ 
Sbjct: 1027 TINKLMSLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQ- 1085

Query: 362  SNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLT 413
                            +D + IE +P  +        L L  C  L++LP ++    +L 
Sbjct: 1086 ----------------LDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLY 1129

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESL 472
            SL ++    +E LP+E G LE L ELR+     ++ +PKS   L             +SL
Sbjct: 1130 SLNLVGS-NIEELPEEFGKLENLVELRMNNCKMLKRLPKSFGDL-------------KSL 1175

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL-------------TIKGTA---- 515
              RLY+ ++L +           LP+  GNL  L VL              + GT+    
Sbjct: 1176 -HRLYMQETLVA----------ELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPR 1224

Query: 516  IREVPESLGQLSSLE------WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
              EVP S  +L  LE      W +        IP+ L +LS L+ L L NN    +P  L
Sbjct: 1225 FVEVPNSFSKLLKLEELDACSWRISGK-----IPDDLEKLSCLMKLNLGNNYFHSLPSSL 1279

Query: 570  DPLSSLKYLDLFE-NNLDRIP---------EYLRSFPTSIPSEFTSLRLSVDLR--NCLK 617
              LS+L+ L L +   L R+P              F     S+ + L +  DL   NC K
Sbjct: 1280 VKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLNLTNCAK 1339

Query: 618  -LDPNELSEI--IKDGWM------------KQSVNGETYITKSMYFPGNEIPKWFRHQST 662
             +D   L  +  +K  +M            K+       + +++  PGN +P WF   S 
Sbjct: 1340 VVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF---SQ 1396

Query: 663  GSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
            G       P      +L G    VVVA        ++  EDD
Sbjct: 1397 GPVTFSAQPN----RELRGVIIAVVVAL-------NDETEDD 1427


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 229/508 (45%), Gaps = 82/508 (16%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSK------------------NKCMVHSLEGVPF--TEL 46
            E+  +   F+KM +LR+L+F  ++                   +C  H      F    L
Sbjct: 546  ELHFSVNVFTKMNKLRVLRFYDAQIWGSSWIGRHNDRYKSPYTECKFHLSGDFKFLSNHL 605

Query: 47   RYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
            R   W  +PLK+L +  H E L+ LKM  S++ QLW+  ++   LK I+L +S+ L K P
Sbjct: 606  RSLHWDGYPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTP 665

Query: 106  DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            D S A  L  + L  C+SL + H SI  L KL  L+L+ CK+L S  +SIH + L+ + L
Sbjct: 666  DFSGAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFSSSIHLESLQTITL 725

Query: 166  RGCSNLKNLPKMTSCHLRSTLP---LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
             GCS LK  P++        LP   L G  I+ LP SI+ L+ +  L +  CK LE++  
Sbjct: 726  SGCSKLKKFPEVQGA--MDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPG 783

Query: 223  SIFKLQFLESIRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSSELKLK------- 267
             IFKL+ L+++ +  C  L+ L         +    +D T  +E PSS   L        
Sbjct: 784  CIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKL 843

Query: 268  -KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
              C +  SLP   C   SL +L +  C   ++LPD++G+LQ L +L  +GT I+E+P  +
Sbjct: 844  KNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSI 903

Query: 327  GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
              L  L  L L  C   E                 S   NL        C      +   
Sbjct: 904  TLLTKLEVLSLAGCKGGE-----------------SKSRNL------ALC------LRSS 934

Query: 387  PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTG 445
            P+  L+          PS L +  SL  L +  C  LE  LP +L +L  LE L +    
Sbjct: 935  PTKGLR----------PSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNS 984

Query: 446  IREVPKSLAQLALSKLKLKKCSSFESLP 473
               VP       L +L L+ C S  SLP
Sbjct: 985  FITVPNLSRLPRLKRLILEHCKSLRSLP 1012



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 217/765 (28%), Positives = 336/765 (43%), Gaps = 98/765 (12%)

Query: 69   SLKMPGSKVTQLW--DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
            S+K PG K ++LW  DDV        ID+  +   T+      A    +L+L   S+L E
Sbjct: 505  SIKDPG-KRSRLWVNDDV--------IDMLTTNTGTE------AVEGMVLNL---STLKE 546

Query: 127  THSSIQY---LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
             H S+     +NKL VL     +   S     H+   K        +L    K  S HLR
Sbjct: 547  LHFSVNVFTKMNKLRVLRFYDAQIWGSSWIGRHNDRYKSPYTECKFHLSGDFKFLSNHLR 606

Query: 184  STLPLLGVGIEELPSSIKCLSNIGELLIYS-CKRLENISSSIFKLQFLE-SIRIHRCPNL 241
            S L   G  ++ LPS+      +   + +S  ++L   + S  KL+F+E S   H     
Sbjct: 607  S-LHWDGYPLKSLPSNFHPEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHLIKTP 665

Query: 242  QFLEMPSCN---IDGTRS--KEQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLE 289
             F   P      ++G  S  K  PS         L L+ C   +S  S     +SL ++ 
Sbjct: 666  DFSGAPKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSF-SSSIHLESLQTIT 724

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
            +  C   ++ P+  G +  L  L + GTAI+ LP  +  L  LS L L+ C  LE +   
Sbjct: 725  LSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGC 784

Query: 350  IFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSVLKLN-------- 394
            IFKLKS++++ +SNCS LK  PEI           +D +G+  +PSS+  LN        
Sbjct: 785  IFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKLK 844

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             C KL SLP S+C   SL +L +  C +L++LPD++G+L+ L +L+  GTGI+EVP S+ 
Sbjct: 845  NCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSIT 904

Query: 455  QLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
             L  L  L L  C   ES    L +    +  + +        P  +  L  L+ L + G
Sbjct: 905  LLTKLEVLSLAGCKGGESKSRNLALCLRSSPTKGLR-------PSFLPVLYSLRKLNLSG 957

Query: 514  TAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLD 570
              + E  +P  L  LS LE L LS N+   +P +L++L  L  L L +  +L  +PE   
Sbjct: 958  CNLLEGALPSDLSSLSWLECLDLSRNSFITVP-NLSRLPRLKRLILEHCKSLRSLPELPS 1016

Query: 571  PLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSE----I 626
             +       L  N+   +  +  S P+S  +   S  L+    NC +L  NE S+    I
Sbjct: 1017 NIEK-----LLANDCTSLETF--SNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDNVEAI 1069

Query: 627  IKDGWMKQSVN---GETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
            ++   +  S++      Y  K      PG+ IP+WF  QS G +++++ P      +LMG
Sbjct: 1070 LRGIRLVASISNFVAPHYELKWYDAVVPGSSIPEWFTDQSLGCSVTVELPPHWCTTRLMG 1129

Query: 682  FAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVF 741
             A C V   ++             K    +      S G+  + ++        ++DH++
Sbjct: 1130 LAVCFVFHPNIGMG----------KFGRSEYFSMNESGGFSLHNTA---STHFSKADHIW 1176

Query: 742  LGSSIFAGENSCKRSDEF---FFHIDRSCCEVKKCGIHFVHAQRQ 783
             G     GE      D     F   +R+   VKKCG   V  Q +
Sbjct: 1177 FGYRPLYGEVFSPSIDHLKVSFAGSNRAGEVVKKCGARLVFEQDE 1221


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 210/762 (27%), Positives = 328/762 (43%), Gaps = 159/762 (20%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILH 63
            SEI I   +F+ M +LRLL+     N  +   L+ +P +EL++ +W  FPL+ L  +IL 
Sbjct: 796  SEITIPVESFAPMKKLRLLQI---NNVELEGDLKLLP-SELKWIQWKGFPLENLPPDILS 851

Query: 64   WE-NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +  ++ L   G +  +     +   +LK ++L+    L  +PDLS    LE L L  C+
Sbjct: 852  RQLGVLDLSESGVRRVKTLPRKRGDENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCN 911

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH 181
             L +   S+  L KL  LDL RC SL+     +   K L++  L GCSNL  LP+     
Sbjct: 912  LLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPE----- 966

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                     +G      S+ CL      L+     + N+  SIF+LQ LE + +  C ++
Sbjct: 967  --------NIG------SMPCLKE----LLLDGTAISNLPYSIFRLQKLEKLSLMGCRSI 1008

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
            +  E+PSC    T  ++    +  L+      +LPS     K+L  L ++ C +   +P+
Sbjct: 1009 E--ELPSCVGYLTSLEDLYLDDTALR------NLPSSIGDLKNLQKLHLMRCTSLSTIPE 1060

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
             +  L +L  L I+G+A+ ELP   G L  L+ L   +C  L+ + SSI  L S+  ++ 
Sbjct: 1061 TINKLMSLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQ- 1119

Query: 362  SNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLT 413
                            +D + IE +P  +        L L  C  L++LP ++    +L 
Sbjct: 1120 ----------------LDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIGKMDTLY 1163

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESL 472
            SL ++    +E LP+E G LE L ELR+     ++ +PKS   L             +SL
Sbjct: 1164 SLNLVGS-NIEELPEEFGKLENLVELRMNNCKMLKRLPKSFGDL-------------KSL 1209

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL-------------TIKGTA---- 515
              RLY+ ++L +           LP+  GNL  L VL              + GT+    
Sbjct: 1210 -HRLYMQETLVA----------ELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPR 1258

Query: 516  IREVPESLGQLSSLE------WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
              EVP S  +L  LE      W +        IP+ L +LS L+ L L NN    +P  L
Sbjct: 1259 FVEVPNSFSKLLKLEELDACSWRISGK-----IPDDLEKLSCLMKLNLGNNYFHSLPSSL 1313

Query: 570  DPLSSLKYLDLFE-NNLDRIP---------EYLRSFPTSIPSEFTSLRLSVDLR--NCLK 617
              LS+L+ L L +   L R+P              F     S+ + L +  DL   NC K
Sbjct: 1314 VKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLNLTNCAK 1373

Query: 618  -LDPNELSEI--IKDGWM------------KQSVNGETYITKSMYFPGNEIPKWFRHQST 662
             +D   L  +  +K  +M            K+       + +++  PGN +P WF   S 
Sbjct: 1374 VVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF---SQ 1430

Query: 663  GSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
            G       P      +L G    VVVA        ++  EDD
Sbjct: 1431 GPVTFSAQPN----RELRGVIIAVVVAL-------NDETEDD 1461


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 272/586 (46%), Gaps = 95/586 (16%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEG--VPFTELRYFEWHQFPLK--TLNI 61
            +++ ++  +F  M  LRLL+           SLEG  +P  EL++ +W   PL+  +L+ 
Sbjct: 567  NQVMLDTKSFEPMVSLRLLQINNL-------SLEGKFLP-DELKWLQWRGCPLECISLDT 618

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLV--SLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
            L  E  V     G K+  LW      V  +L  ++L     L  +PDLS    LE ++L 
Sbjct: 619  LPRELAVLDLSNGQKIKSLWGLKSQKVPENLMVMNLSNCYQLAAIPDLSWCLGLEKINLA 678

Query: 120  YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             C +LT  H SI  L  L  L+L RC++L  LP+ +   K+L+ L+L  CS LK LP+  
Sbjct: 679  NCINLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPE-- 736

Query: 179  SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                        +G   +  S+K L+     ++        +  SIF+L  LE + + RC
Sbjct: 737  -----------NIG---MLKSLKTLAADKTAIV-------KLPESIFRLTKLERLVLDRC 775

Query: 239  PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
             +L+   +P C       K     EL L +    E LP+     K+L  L ++ C     
Sbjct: 776  SHLR--RLPDC-----IGKLCALQELSLYETGLQE-LPNTVGFLKNLEKLSLMGCEGLTL 827

Query: 299  LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC------------------ 340
            +PD +GNL++L  L+   + I+ELP  +G L+ L  L ++ C                  
Sbjct: 828  MPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRTLLVRKCKLSKLPDSFKTLASIIEL 887

Query: 341  ----SELEYISSSIFKLKSVESIEISNCSNLKGFPE-IPFCNIDGSGIERIPSSVLKLNK 395
                + + Y+   I +LK +  +EI NCSNL+  PE I +            +S+  LN 
Sbjct: 888  DLDGTYIRYLPDQIGELKQLRKLEIGNCSNLESLPESIGYL-----------TSLNTLNI 936

Query: 396  CS-KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             +  +  LP S+ + ++L +L +  C+ L++LP  +GNL++L  L++E T + ++P+S  
Sbjct: 937  INGNIRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKSLCHLKMEETAMVDLPESFG 996

Query: 455  QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
             L          SS  +L  R+     L  + + +  +F+ LP    NL  L  L  +  
Sbjct: 997  ML----------SSLRTL--RMAKRPHLVPISVKNTGSFV-LPPSFCNLTLLHELDARAW 1043

Query: 515  AIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
             +  ++P+   +LS LE L L  NN   +P SL  LS L  L L N
Sbjct: 1044 RLSGKIPDDFEKLSLLETLKLDQNNFHSLPSSLKGLSILKELSLPN 1089



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 170/333 (51%), Gaps = 36/333 (10%)

Query: 291 IDCPNFERLPDELGNLQALNRLIID---GTAIRELPEGLGQLAL---------------- 331
           ++C + + LP EL  L   N   I    G   +++PE L  + L                
Sbjct: 611 LECISLDTLPRELAVLDLSNGQKIKSLWGLKSQKVPENLMVMNLSNCYQLAAIPDLSWCL 670

Query: 332 -LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV 390
            L K+ L NC  L  I  SI  L ++ ++ ++ C NL   P       D SG++ + S  
Sbjct: 671 GLEKINLANCINLTRIHESIGSLTTLRNLNLTRCENLIELPS------DVSGLKHLES-- 722

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
           L L++CSKL++LP ++ M KSL +L   D   + +LP+ +  L  LE L ++  + +R +
Sbjct: 723 LILSECSKLKALPENIGMLKSLKTLAA-DKTAIVKLPESIFRLTKLERLVLDRCSHLRRL 781

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           P  + +L AL +L L + +  + LP+ +   K+L  L ++ C+    +PD IGNLE L  
Sbjct: 782 PDCIGKLCALQELSLYE-TGLQELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTE 840

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L    + I+E+P ++G LS L  L++    L  +P+S   L+S++ L L    +  +P++
Sbjct: 841 LLASNSGIKELPSTIGSLSYLRTLLVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQ 900

Query: 569 LDPLSSLKYLDLFE-NNLDRIPE---YLRSFPT 597
           +  L  L+ L++   +NL+ +PE   YL S  T
Sbjct: 901 IGELKQLRKLEIGNCSNLESLPESIGYLTSLNT 933


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 165/497 (33%), Positives = 235/497 (47%), Gaps = 66/497 (13%)

Query: 8    IQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
            I I   +   M  LRLLK             NK  +      P  ELRY  W  +PL++L
Sbjct: 554  IHITTESLEMMKNLRLLKIYLDHESFSTREDNKVKLSKDFEFPSLELRYLYWQGYPLESL 613

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILD 117
             +    E+LV L M  S +TQLW++   L  L  I L  S+ L ++PD+S+ A NLE L 
Sbjct: 614  PSSFFVEDLVELDMRYSSLTQLWENDMLLEKLNTIRLSCSQHLIEIPDISICAPNLEKLI 673

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  CSSL   H SI  L+KL +L+L  CK L+S P+ I  K L+ L   GCS LK  P +
Sbjct: 674  LDGCSSLLILHPSIGKLSKLILLNLKNCKKLSSFPSIIDMKALEILNFSGCSGLKKFPDI 733

Query: 178  TSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                 HL   L L    IEELPSSI  ++ +  L +  CK L+++ +SI +L+ LE + +
Sbjct: 734  RGNMDHLLE-LHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFL 792

Query: 236  HRCPNLQ-----FLEMPSCN---IDGTRSKEQPSS--------ELKLKKCPRPESLPSGQ 279
              C  L+      ++M +     +DGT  +  PSS         L ++KC    SLP G 
Sbjct: 793  SGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGM 852

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            C   SL +L +  C     LP  LG+LQ L +L  DGTAI + PE +  L  L  L    
Sbjct: 853  CKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPG 912

Query: 340  CSELEYIS-SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK 398
            C  L   S  S+F    +      N SN             G G+               
Sbjct: 913  CKILAPTSLGSLFSFWLMH----RNSSN-------------GVGLR-------------- 941

Query: 399  LESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
               LPSS   F+S T+L++ D K +E  +P+++ +L +L++L +       +P  ++QL 
Sbjct: 942  ---LPSSFFSFRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSRNNFLSIPAGISQLT 998

Query: 458  -LSKLKLKKCSSFESLP 473
             L  L+L  C S   +P
Sbjct: 999  NLKDLRLGHCQSLIIIP 1015



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 169/588 (28%), Positives = 261/588 (44%), Gaps = 133/588 (22%)

Query: 309  LNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            L +LI+DG +++  L   +G+L+ L  L LKNC +L    S I  +K++E +  S CS L
Sbjct: 669  LEKLILDGCSSLLILHPSIGKLSKLILLNLKNCKKLSSFPS-IIDMKALEILNFSGCSGL 727

Query: 368  KGFPEIPFCNID--------GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKS 411
            K FP+I   N+D         + IE +PSS+        L L +C  L+SLP+S+C  KS
Sbjct: 728  KKFPDIR-GNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKS 786

Query: 412  LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
            L  L +  C KLE  P+ + ++E L+EL ++GT I  +P S+ +L  L  L ++KC +  
Sbjct: 787  LEYLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLV 846

Query: 471  SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
            SLP  +    SL +L +  C     LP  +G+L+ L  L   GTAI + PES+  L +L+
Sbjct: 847  SLPKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQ 906

Query: 531  ---------------------WLV------------------------LSDNNLQIIPES 545
                                 WL+                        L  ++L++I  +
Sbjct: 907  VLIYPGCKILAPTSLGSLFSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGA 966

Query: 546  L-NQLSSLVSLK---LSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRS------ 594
            + N + SL+SLK   LS NN   IP  +  L++LK L L    +L  IPE   S      
Sbjct: 967  IPNDICSLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVDA 1026

Query: 595  ------FPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY------- 641
                  FPTS  S  T   L     NC K   ++ S+  ++   +   N  +        
Sbjct: 1027 HNCTALFPTS-SSVCTLQGLQFLFYNCSKPVEDQSSDQKRNALQRFPHNDASSSASVSSV 1085

Query: 642  -------------ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
                         I  S+ FPG+ IP+W  HQ+ GS I ++ P     +  +GF  C ++
Sbjct: 1086 TTSPVVRQKLLENIAFSIVFPGSGIPEWIWHQNVGSFIKIELPTDWYNDDFLGFVLCSIL 1145

Query: 689  ACSVSECCRHESVEDDRKCNLFDVV---CDRRSEGYDSYTSSYLGKISHVESDHVFLGSS 745
                      E + +   C L   V    D +  G+D +   + G I  + S+HV+LG  
Sbjct: 1146 ----------EHLPERIICRLNSDVFYYGDFKDIGHDFH---WKGDI--LGSEHVWLGYQ 1190

Query: 746  ------IFA-----GENSCKRSDEFFFHIDRSCCE-VKKCGIHFVHAQ 781
                  +F        N  + S E     + S    VKKCG+  ++A+
Sbjct: 1191 PCSQLRLFQFNDPNDWNYIEISFEAAHRFNSSASNVVKKCGVCLIYAE 1238


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 177/607 (29%), Positives = 290/607 (47%), Gaps = 78/607 (12%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
            + I +   +F +M  LR L+     +  +  + + +P  E+++ +W    L+ L +    
Sbjct: 579  ANIILKTESFKQMVNLRYLQI---NDVVLNGNFKQMP-AEVKFLQWRGCSLENLPSEFCM 634

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
            ++L  L +  SK+ +LW        L  ++L+    LT LPDLS+   LE L L  C +L
Sbjct: 635  QHLAVLDLSHSKIRKLWKQSWCTERLLLLNLQNCYHLTALPDLSVHSALEKLILENCKAL 694

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHL 182
             + H S+  L KL  L+L  C +LT  P+ +   K L+ L L GC  +K LP  M S   
Sbjct: 695  VQIHKSVGDLKKLIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKN 754

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI--------- 233
               L L    I +LP SI  L  + +L +  C  L ++S  I KL  L+ +         
Sbjct: 755  LRELLLDETAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSGLEE 814

Query: 234  ---RIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
                I    NL+ L +  C     I  + S  +   +L+L      E LP+       L 
Sbjct: 815  IPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSS-IEELPASIGSLCHLK 873

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            SL +  C +  +LPD +G L +L  L ++GT++ E+P+ +G L++L KL + NC +L ++
Sbjct: 874  SLSVSHCQSLSKLPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHIGNCMDLRFL 933

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSS 405
              SI K+ ++ ++ I + S +   PE          IE + S S L LNKC         
Sbjct: 934  PESIGKMLNLTTL-ILDYSMISELPE---------SIEMLESLSTLMLNKC--------- 974

Query: 406  LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLK 464
                           K+L+RLP  +GNL+ L+ L +E T + E+P  +  L+ L   K++
Sbjct: 975  ---------------KQLQRLPASIGNLKRLQHLYMEETSVSELPDEMGMLSNLMIWKMR 1019

Query: 465  KCSSFESLPSRLYVSKSLTSLEIIDCKN------FMRLPDEIGNLEYLKVLTIKGTAIRE 518
            K  + +   +   + KSL++L +++  +      F  +PDE   L  L+ L     +I  
Sbjct: 1020 KPHTRQLQDTASVLPKSLSNLSLLEHLDACGWAFFGAVPDEFDKLSSLQTLNFSHNSICC 1079

Query: 519  VPESLGQLSSLEWLVLSD----NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS 573
            +P  L  LS L+ L+L+D     +L ++P      SSLV+L ++N N LE + + L  L 
Sbjct: 1080 LPSRLRGLSILKNLILADCKQLKSLPLLP------SSLVNLIVANCNALESVCD-LANLQ 1132

Query: 574  SLKYLDL 580
            SL+ LDL
Sbjct: 1133 SLQDLDL 1139



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 237/525 (45%), Gaps = 76/525 (14%)

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
            TE+   +  L  L++ D+    +   +P  +     K L  RGCS L+NLP        +
Sbjct: 585  TESFKQMVNLRYLQINDVVLNGNFKQMPAEV-----KFLQWRGCS-LENLPSEFCMQHLA 638

Query: 185  TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
             L L    I +L     C   +  L + +C          + L  L  + +H    L+ L
Sbjct: 639  VLDLSHSKIRKLWKQSWCTERLLLLNLQNC----------YHLTALPDLSVHSA--LEKL 686

Query: 245  EMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
             + +C     I  +    +    L LK C      PS     K L  L++  CP  ++LP
Sbjct: 687  ILENCKALVQIHKSVGDLKKLIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLP 746

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            D++ +++ L  L++D TAI +LP+ +  L  L KL LK C  L ++S  I KL S++ + 
Sbjct: 747  DDMRSMKNLRELLLDETAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELS 806

Query: 361  ISNCSNLKGFPEIP-----FCNIDGSGIER------IPSSVLKLNK-------CSKLESL 402
            + +     G  EIP       N++   + R      IP S+  L          S +E L
Sbjct: 807  LDSS----GLEEIPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEEL 862

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
            P+S+     L SL +  C+ L +LPD +G L +L EL +EGT + E+P  +  L+ L KL
Sbjct: 863  PASIGSLCHLKSLSVSHCQSLSKLPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKL 922

Query: 462  KLKKC-----------------------SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
             +  C                       S    LP  + + +SL++L +  CK   RLP 
Sbjct: 923  HIGNCMDLRFLPESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPA 982

Query: 499  EIGNLEYLKVLTIKGTAIREVPESLGQLSSLE-WLVLSDNNLQ------IIPESLNQLSS 551
             IGNL+ L+ L ++ T++ E+P+ +G LS+L  W +   +  Q      ++P+SL+ LS 
Sbjct: 983  SIGNLKRLQHLYMEETSVSELPDEMGMLSNLMIWKMRKPHTRQLQDTASVLPKSLSNLSL 1042

Query: 552  LVSLKLSNNN-LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            L  L          +P+  D LSSL+ L+   N++  +P  LR  
Sbjct: 1043 LEHLDACGWAFFGAVPDEFDKLSSLQTLNFSHNSICCLPSRLRGL 1087


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1401

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 207/770 (26%), Positives = 331/770 (42%), Gaps = 148/770 (19%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILH 63
            SEI I    F  M +LRLL+     N  +  +L+ +P +EL++ +W   PL+ L  +IL 
Sbjct: 597  SEITIPVEPFVPMKKLRLLQI---NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDILA 652

Query: 64   WE-NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +  ++ L   G +  Q     +   +LK I+L+    L  +PDLS  + LE L    C+
Sbjct: 653  RQLGVLDLSESGIRRVQTLPSKKVDENLKVINLRGCHSLKAIPDLSNHKALEKLVFERCN 712

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH 181
             L +   S+  L KL  LDL RC  L+     +   K L++L L GCSNL  LP+     
Sbjct: 713  LLVKVPRSVGNLRKLLQLDLRRCSKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPE----- 767

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                     +G      S+ CL      L+     + N+  SIF+LQ LE + +  C ++
Sbjct: 768  --------NIG------SMPCLKE----LLLDGTAISNLPDSIFRLQKLEKLSLMGCRSI 809

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
            Q  E+PSC    T  ++    +  L+      +LP      K+L  L ++ C +  ++PD
Sbjct: 810  Q--ELPSCLGKLTSLEDLYLDDTALR------NLPISIGDLKNLQKLHLMRCTSLSKIPD 861

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS------------ 349
             +  L +L  L I+G+A+ ELP   G L  L  L   +C  L+ + SS            
Sbjct: 862  TINKLISLKELFINGSAVEELPLVTGSLLCLKDLSAGDCKSLKQVPSSIGGLNFLLQLQL 921

Query: 350  -----------IFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVL 391
                       I  L  +  +E+ NC +LK  PE       +    ++GS IE++P    
Sbjct: 922  NSTPIESLPEEIGDLHFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSNIEKLPKDFG 981

Query: 392  KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
            KL K                L  L + +C+KL+RLP+  G+L++L  L ++ T + E+P+
Sbjct: 982  KLEK----------------LVVLRMNNCEKLKRLPESFGDLKSLRHLYMKETLVSELPE 1025

Query: 452  SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            S   L+       K    E L   L+      +    +   F+ +P+   NL  L+ L  
Sbjct: 1026 SFGNLS-------KLMVLEMLKKPLFRISESNAPGTSEEPRFVEVPNSFSNLTSLEELDA 1078

Query: 512  KGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPE-- 567
                I  ++P+ L +LSSL  L L +N    +P SL  LS+L  L L +   L+R+P   
Sbjct: 1079 CSWRISGKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLP 1138

Query: 568  ------------RLDPLSSLKYLDLFEN-------------NLDRIPEYLRSFPTSIPSE 602
                         L+ +S L  L + E+              L+ +    R + T   S 
Sbjct: 1139 CKLEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIPGLEHLMALKRLYMTGCNSN 1198

Query: 603  FTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST 662
            ++   L+V  R         LS++I      Q++     + +++  PGN +P WF   S 
Sbjct: 1199 YS---LAVKKR---------LSKVIPR--TSQNLRASLKMLRNLSLPGNRVPDWF---SQ 1241

Query: 663  GSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDV 712
            G       P      +L G    VVVA +      HE  +D +K N+  V
Sbjct: 1242 GPVTFSAQPN----KELRGVIIAVVVALN------HEIGDDYQKPNVVGV 1281


>gi|42568353|ref|NP_199459.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008006|gb|AED95389.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1127

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 198/369 (53%), Gaps = 26/369 (7%)

Query: 7   EIQINPYTFSKMTELRLLKF----CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL- 59
           E+ I+  +F  M  L  LK        K K   H  E   +  + LR   + ++P K L 
Sbjct: 545 ELHIHESSFKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLPSRLRLLRFDRYPSKCLP 604

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +  H ENLV L+M  SK+ +LWD V +L  L+ +DL+ S+ L ++PDLS+A NLE L L 
Sbjct: 605 SNFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATNLETLKLS 664

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            CSSL E  SSIQYLNKL  LD+  C  L ++P+ ++ K L RL L GCS LK+      
Sbjct: 665 SCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVNLKSLDRLNLSGCSRLKSF----- 719

Query: 180 CHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
             + + +  L +G   ++PS+++ L N+ EL++  C+R++ + + +  +      R+   
Sbjct: 720 LDIPTNISWLDIGQTADIPSNLR-LQNLDELIL--CERVQ-LRTPLMTMLSPTLTRLTFS 775

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            N  F+E+PS +I      E     L++  C    +LP+G     SL SL++  C   + 
Sbjct: 776 NNPSFVEVPS-SIQNLYQLEH----LEIMNCRNLVTLPTG-INLDSLISLDLSHCSQLKT 829

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            PD   N+  LN   +  TAI E+P  + +L+LL  L++  CS L  +S +I KLK +E 
Sbjct: 830 FPDISTNISDLN---LSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLER 886

Query: 359 IEISNCSNL 367
            + S+C  L
Sbjct: 887 ADFSDCVEL 895



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 100/441 (22%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
            L KL+++  S+LE +   +  L  + ++++    NLK  P++       + +E      L
Sbjct: 612  LVKLQMQQ-SKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSM----ATNLE-----TL 661

Query: 392  KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG----TGIR 447
            KL+ CS L  LPSS+     L  L++  C  LE +P  + NL++L+ L + G        
Sbjct: 662  KLSSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFL 720

Query: 448  EVPKSLAQL--------------------------------------ALSKLKLKKCSSF 469
            ++P +++ L                                       L++L      SF
Sbjct: 721  DIPTNISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSF 780

Query: 470  ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSS 528
              +PS +     L  LEI++C+N + LP  I NL+ L  L +   + ++  P+    +S 
Sbjct: 781  VEVPSSIQNLYQLEHLEIMNCRNLVTLPTGI-NLDSLISLDLSHCSQLKTFPDISTNISD 839

Query: 529  LEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD------LF 581
            L    LS   ++ +P S+ +LS L  L ++  +NL  +   +  L  L+  D      L 
Sbjct: 840  LN---LSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFSDCVELT 896

Query: 582  ENNLD-RIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
            E + +    E ++  P      F++++L  +  NC KLD   L            +  +T
Sbjct: 897  EASWNGSSSEMVKLLPA---DNFSTVKL--NFINCFKLDLTAL------------IQNQT 939

Query: 641  YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV----------VAC 690
            +  + +   G E+P +F H+++G +ISL  P  +       F  C V          V+ 
Sbjct: 940  FFMQ-LILTGEEVPSYFTHRTSGDSISL--PHISVCQSFFSFRGCTVIDVDSFSTISVSF 996

Query: 691  SVSECCRHESVEDDRKCNLFD 711
             +  CCR      DR  N FD
Sbjct: 997  DIEVCCRFI----DRFGNHFD 1013


>gi|10177584|dbj|BAB10815.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1160

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 198/369 (53%), Gaps = 26/369 (7%)

Query: 7   EIQINPYTFSKMTELRLLKF----CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL- 59
           E+ I+  +F  M  L  LK        K K   H  E   +  + LR   + ++P K L 
Sbjct: 545 ELHIHESSFKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLPSRLRLLRFDRYPSKCLP 604

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +  H ENLV L+M  SK+ +LWD V +L  L+ +DL+ S+ L ++PDLS+A NLE L L 
Sbjct: 605 SNFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATNLETLKLS 664

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            CSSL E  SSIQYLNKL  LD+  C  L ++P+ ++ K L RL L GCS LK+      
Sbjct: 665 SCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVNLKSLDRLNLSGCSRLKSF----- 719

Query: 180 CHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
             + + +  L +G   ++PS+++ L N+ EL++  C+R++ + + +  +      R+   
Sbjct: 720 LDIPTNISWLDIGQTADIPSNLR-LQNLDELIL--CERVQ-LRTPLMTMLSPTLTRLTFS 775

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            N  F+E+PS +I      E     L++  C    +LP+G     SL SL++  C   + 
Sbjct: 776 NNPSFVEVPS-SIQNLYQLEH----LEIMNCRNLVTLPTG-INLDSLISLDLSHCSQLKT 829

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            PD   N+  LN   +  TAI E+P  + +L+LL  L++  CS L  +S +I KLK +E 
Sbjct: 830 FPDISTNISDLN---LSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLER 886

Query: 359 IEISNCSNL 367
            + S+C  L
Sbjct: 887 ADFSDCVEL 895



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 100/441 (22%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
            L KL+++  S+LE +   +  L  + ++++    NLK  P++       + +E      L
Sbjct: 612  LVKLQMQQ-SKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSM----ATNLE-----TL 661

Query: 392  KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG----TGIR 447
            KL+ CS L  LPSS+     L  L++  C  LE +P  + NL++L+ L + G        
Sbjct: 662  KLSSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFL 720

Query: 448  EVPKSLAQL--------------------------------------ALSKLKLKKCSSF 469
            ++P +++ L                                       L++L      SF
Sbjct: 721  DIPTNISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSF 780

Query: 470  ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSS 528
              +PS +     L  LEI++C+N + LP  I NL+ L  L +   + ++  P+    +S 
Sbjct: 781  VEVPSSIQNLYQLEHLEIMNCRNLVTLPTGI-NLDSLISLDLSHCSQLKTFPDISTNISD 839

Query: 529  LEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD------LF 581
            L    LS   ++ +P S+ +LS L  L ++  +NL  +   +  L  L+  D      L 
Sbjct: 840  LN---LSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFSDCVELT 896

Query: 582  ENNLD-RIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
            E + +    E ++  P      F++++L  +  NC KLD   L            +  +T
Sbjct: 897  EASWNGSSSEMVKLLPA---DNFSTVKL--NFINCFKLDLTAL------------IQNQT 939

Query: 641  YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV----------VAC 690
            +  + +   G E+P +F H+++G +ISL  P  +       F  C V          V+ 
Sbjct: 940  FFMQ-LILTGEEVPSYFTHRTSGDSISL--PHISVCQSFFSFRGCTVIDVDSFSTISVSF 996

Query: 691  SVSECCRHESVEDDRKCNLFD 711
             +  CCR      DR  N FD
Sbjct: 997  DIEVCCRFI----DRFGNHFD 1013


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 169/536 (31%), Positives = 252/536 (47%), Gaps = 67/536 (12%)

Query: 4    INSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV--------PFTELRYFEWHQFP 55
            I  +I I   +F+ M  LRLLK               V        P  ELRY  W  +P
Sbjct: 669  IPKQIHITTKSFAMMKNLRLLKIYSHLKSTSAREDNSVKLSKDFEFPSCELRYLYWQGYP 728

Query: 56   LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNL 113
            L++L +    E+LV L M  S + QLW++   L  L  I L  S+ L ++PD+S+ A NL
Sbjct: 729  LESLPSSFDAEDLVELDMRYSNLKQLWENDMLLEKLNTIRLSCSQHLIEIPDISISAPNL 788

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            E L L  CSSL E H+SI  L+KL +L L  CK L+S P+ I+ + LK L L GCS LK 
Sbjct: 789  ETLILDGCSSLLEVHTSIGKLSKLILLSLKNCKKLSSFPSIINMEALKILNLSGCSGLKK 848

Query: 174  LPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
             P +     HL   L L    IEELP S   L+ +  L +  CK L+++ +SI KL+ LE
Sbjct: 849  FPDIQGNMEHLLE-LYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLESLE 907

Query: 232  SIRIHRCPNLQ-FLEM-------PSCNIDGTRSKEQPSSE--------LKLKKCPRPESL 275
             + +  C  L+ F EM           +DGT  +  P S         L L+ C    SL
Sbjct: 908  YLFLSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSL 967

Query: 276  PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
            P G C   SL +L +  C     LP  LG+LQ L +L  +GTAI + P+    + LL  L
Sbjct: 968  PKGMCKLTSLETLIVSGCSLLNNLPRNLGSLQRLVQLHAEGTAITQPPD---SIVLLRNL 1024

Query: 336  ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
            E+     L Y    I    S+ S        L  F  +   + +G G+            
Sbjct: 1025 EV-----LVYPGRKILTPTSLGS--------LFSFWLLHRNSSNGIGLH----------- 1060

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLA 454
                  LPS   +F+S T+L++ DCK +E  +P+++ +L +L++L +       +P  ++
Sbjct: 1061 ------LPSGFPIFRSFTNLDLSDCKLIEGAIPNDICSLISLKKLALSKNNFLSIPAGIS 1114

Query: 455  QLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            +L  L  L + +C S   +P    +  S+  ++  +C   +     +  L+ L+ L
Sbjct: 1115 ELTNLKDLLIGQCQSLIEIPE---LPPSIRDIDAHNCTALLPGSSSVSTLQGLQFL 1167


>gi|168032887|ref|XP_001768949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679861|gb|EDQ66303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 538

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 268/571 (46%), Gaps = 66/571 (11%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S++T L +++ NL SL  +D++    LT LP+ L    +L  L +  CSSLT   + +  
Sbjct: 5   SRLTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNELGN 64

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L  LD+ RC SLTSLP  + +   L    L GCS+L +LP                 
Sbjct: 65  LTSLTTLDIRRCSSLTSLPNELGNLTSLTTFDLSGCSSLTSLPN---------------- 108

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
                  +  L+++    I  C  L ++ + +  L  L ++ I    +L  L     N+ 
Sbjct: 109 ------ELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTLNIDGWSSLTSLPNELGNLT 162

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
              +       L ++ C    SLP       SLT+L +  C +   LP+ELGNL +L   
Sbjct: 163 SLTT-------LNMEYCSSLTSLPYELGNLTSLTTLNMECCSSLTLLPNELGNLTSLT-- 213

Query: 313 IID---GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
           IID    +++  LP  L  L  L+ L ++  S L  + + +  L S+ ++ I  CS+L  
Sbjct: 214 IIDIGWCSSLTSLPNELDNLTSLTNLNIQWYSSLISLPNELDNLTSLTTLNIQWCSSLTS 273

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
            P       + SG   I  + L++N+CS L SLP+ L    SLT+ +I  C  L  LP+E
Sbjct: 274 LP-------NESG-NLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNE 325

Query: 430 LGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           LGNL +L  L +E  + +  +P  L  L  L+   + +CSS  SL + L   KSLT+ +I
Sbjct: 326 LGNLTSLTTLNIEWCSSLISLPSELGNLTILTTFNIGRCSSLTSLSNELGNLKSLTTFDI 385

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD--NNLQIIPE 544
             C +   LP+E GNL  L    I+  +++  +P     L+SL    LS   ++L  +P 
Sbjct: 386 GRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNESDNLTSLTSFDLSGWCSSLTSLPN 445

Query: 545 SLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFP------ 596
            L  L+SL +L +   ++L  +P     L SL  L + E ++L  +P  L +        
Sbjct: 446 ELGNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFY 505

Query: 597 -------TSIPSEFTSLR--LSVDLRNCLKL 618
                  TS+P+E  +L    + DLR C  L
Sbjct: 506 IGRCSSLTSLPNELGNLTSLTTFDLRGCSSL 536



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 216/464 (46%), Gaps = 77/464 (16%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLE 114
           L TLNI  W +L SL           +++ NL SL  ++++Y   LT LP +L    +L 
Sbjct: 140 LTTLNIDGWSSLTSLP----------NELGNLTSLTTLNMEYCSSLTSLPYELGNLTSLT 189

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKN 173
            L++  CSSLT   + +  L  L ++D+  C SLTSLP  + +   L  L ++  S+L +
Sbjct: 190 TLNMECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLNIQWYSSLIS 249

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           LP                                         L+N++S       L ++
Sbjct: 250 LP---------------------------------------NELDNLTS-------LTTL 263

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            I  C +L  L   S N+    +       L++ +C    SLP+      SLT+ +I  C
Sbjct: 264 NIQWCSSLTSLPNESGNLISLTT-------LRMNECSSLTSLPNELGNLTSLTTFDIGRC 316

Query: 294 PNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            +   LP+ELGNL +L  L I+  +++  LP  LG L +L+   +  CS L  +S+ +  
Sbjct: 317 SSLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLTILTTFNIGRCSSLTSLSNELGN 376

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           LKS+ + +I  CS+L   P   F N+          +   +  CS L SLP+      SL
Sbjct: 377 LKSLTTFDIGRCSSLTSLPN-EFGNLTS-------LTTFDIQWCSSLTSLPNESDNLTSL 428

Query: 413 TSLEIID-CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSF 469
           TS ++   C  L  LP+ELGNL +L  L ++  + +  +P     L +L+ L++ +CSS 
Sbjct: 429 TSFDLSGWCSSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSL 488

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            SLP+ L    SLT+  I  C +   LP+E+GNL  L    ++G
Sbjct: 489 TSLPNELGNLTSLTTFYIGRCSSLTSLPNELGNLTSLTTFDLRG 532



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 32/365 (8%)

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPE 324
           + +C R  SLP+      SLT+L+I  C +   LP+ELGNL +L  L ++  +++  LP 
Sbjct: 1   MNECSRLTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPN 60

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNID 379
            LG L  L+ L+++ CS L  + + +  L S+ + ++S CS+L   P            D
Sbjct: 61  ELGNLTSLTTLDIRRCSSLTSLPNELGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFD 120

Query: 380 GSG---IERIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             G   +  +P+        + L ++  S L SLP+ L    SLT+L +  C  L  LP 
Sbjct: 121 IQGCLSLTSLPNELGNLTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPY 180

Query: 429 ELGNLEALEELRVE-GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           ELGNL +L  L +E  + +  +P  L  L +L+ + +  CSS  SLP+ L    SLT+L 
Sbjct: 181 ELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLN 240

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPE 544
           I    + + LP+E+ NL  L  L I+  +++  +P   G L SL  L +++ ++L  +P 
Sbjct: 241 IQWYSSLISLPNELDNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPN 300

Query: 545 SLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEF 603
            L  L+SL +  +   ++L  +P  L  L+SL  L++         E+  S   S+PSE 
Sbjct: 301 ELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTLNI---------EWCSSL-ISLPSEL 350

Query: 604 TSLRL 608
            +L +
Sbjct: 351 GNLTI 355


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 216/474 (45%), Gaps = 98/474 (20%)

Query: 7    EIQINPYTFSKMTELRLLK--------FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKT 58
            EIQ++   FS+M +LRLLK        F   ++K  +     +P  ELRY  W  + L  
Sbjct: 555  EIQLSTKVFSRMKKLRLLKVYWSDHSSFTKKESKVFIPKDFEIPSHELRYLYWEGYSLNC 614

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L +  H ENLV L++  S + +LW   + L  LK I+L +S+ LTK+   S   NLE L+
Sbjct: 615  LPSNFHGENLVELELRYSTIKRLWKGSKGLEKLKFINLSHSEKLTKISKFSGMPNLERLN 674

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  C+SL + HSS+  L KL  L L  C+ L S P+SI  + L+ L + GCSN +  P++
Sbjct: 675  LEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSIELESLEVLDISGCSNFEKFPEI 734

Query: 178  TSC--HLRST----------------------------------------------LPLL 189
                 HLR                                                L L 
Sbjct: 735  HGNMRHLRKIYLNQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLG 794

Query: 190  GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
            G  I+ELPSSI  L+ + EL +Y CK L  + SSI +L+FL  I +H C NL+       
Sbjct: 795  GTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIK 854

Query: 250  NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
            +++     E   + LK         LP      K L  L++ +C N   LP  + N+++L
Sbjct: 855  DMENIGRLELMGTSLK--------ELPPSIEHLKGLEELDLTNCENLVTLPSSICNIRSL 906

Query: 310  NRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
             RL++   + ++ELP              KN   L+   S +  L S+  + +S C+ + 
Sbjct: 907  ERLVLQNCSKLQELP--------------KNPMTLQ--CSDMIGLCSLMDLNLSGCNLMG 950

Query: 369  G-FPEIPFC-------NIDGSGIERIPSS-----VLKLNKCSKLES---LPSSL 406
            G  P   +C       N+ GS I  IPS      +L+LN C  LES   LPSSL
Sbjct: 951  GAIPSDLWCLSSLRRLNLSGSNIRCIPSGISQLRILQLNHCKMLESITELPSSL 1004



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 163/638 (25%), Positives = 276/638 (43%), Gaps = 120/638 (18%)

Query: 208  ELLIYSCKRLENISSSIFKLQFL---------ESIRIHRCPNLQFLEMPSCN----IDGT 254
            EL   + KRL   S  + KL+F+         +  +    PNL+ L +  C     +  +
Sbjct: 628  ELRYSTIKRLWKGSKGLEKLKFINLSHSEKLTKISKFSGMPNLERLNLEGCTSLRKVHSS 687

Query: 255  RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
                +  + L+LK C + ES PS     +SL  L+I  C NFE+ P+  GN++ L ++ +
Sbjct: 688  LGVLKKLTSLQLKDCQKLESFPSS-IELESLEVLDISGCSNFEKFPEIHGNMRHLRKIYL 746

Query: 315  DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            + + I+ELP                        +SI  L+S+E ++++NCSN + FPEI 
Sbjct: 747  NQSGIKELP------------------------TSIEFLESLEMLQLANCSNFEKFPEIQ 782

Query: 375  -------FCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIID 419
                   +  + G+ I+ +PSS+        L L +C  L  LPSS+C  + L  + +  
Sbjct: 783  RDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHG 842

Query: 420  CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYV 478
            C  LE  PD + ++E +  L + GT ++E+P S+  L  L +L L  C +  +LPS +  
Sbjct: 843  CSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICN 902

Query: 479  SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
             +SL  L + +C     LP              K     +  + +G L SL  L LS  N
Sbjct: 903  IRSLERLVLQNCSKLQELP--------------KNPMTLQCSDMIG-LCSLMDLNLSGCN 947

Query: 539  LQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            L    IP  L  LSSL  L LS +N+  IP      S +  L + + N  ++ E +   P
Sbjct: 948  LMGGAIPSDLWCLSSLRRLNLSGSNIRCIP------SGISQLRILQLNHCKMLESITELP 1001

Query: 597  TSIPSEFTSLRLSVDLRNCLKLDPNE-------------LSEIIKDGWMKQSVNGETYIT 643
                   +SLR+ +D  +C +LD                    I++  ++  +     I 
Sbjct: 1002 -------SSLRV-LDAHDCTRLDTLSSLSSLLQCSLFSCFKSAIQE--LEHGIESSKSIG 1051

Query: 644  KSMYFPGNE-IPKWFRHQSTGSTISLKTPQPT-GYNKLMGFAFC---VVVACSVSEC--- 695
             ++  PG+  IP+W  +Q  GS ++++ P      N  +GFA C   V +  +  +    
Sbjct: 1052 INIVIPGSRGIPEWISNQELGSEVTVELPMNWCEDNDFLGFALCSLYVPLDDAFEDGGLE 1111

Query: 696  CRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYL------GKISHVESDHVFLGSSIFAG 749
            CR  +   D+   + D+      + Y++   SYL      G +S       +        
Sbjct: 1112 CRLIAFHGDQFRRVDDIWFKSSCKYYENGGVSYLHKCCDNGDVSDCVLWVTYYPQIAIKK 1171

Query: 750  ENSCKRSDEF------FFHIDRSCCEVKKCGIHFVHAQ 781
            ++   +   F       ++      +VKKCG+H ++AQ
Sbjct: 1172 KHRSNQWRHFKALFNGLYNCGSKAFKVKKCGVHLIYAQ 1209


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 250/511 (48%), Gaps = 73/511 (14%)

Query: 4    INSEIQINPYTFSKMTELRLLK----------FCGSKNKCMVHSLEGVPFTELRYFEWHQ 53
            +  +++I+   F +M+ L+ L+          F G  ++ ++ S+  +P  E+R  +W  
Sbjct: 596  LKKKLKISDQAFERMSNLQFLRLDSQYFAQILFEGKSSQYILESVNCLP-REVRLLDWRT 654

Query: 54   FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
            FP+  L +  + E L+ +KM  S + +LW+  + + +LK +DL +SK L +LP+LS A N
Sbjct: 655  FPMTCLPSDFNPELLMEIKMICSNLEKLWEGNKTIRNLKWMDLSHSKNLKELPNLSTATN 714

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNL 171
            L  L+L  CSSL E  SSI  L  L+ L+L  C SL  LP+SI +   L+ L L GCS+L
Sbjct: 715  LRELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSL 774

Query: 172  KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                                   ELPSSI  ++N+    +  C  +  +S SI  +  L+
Sbjct: 775  V----------------------ELPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLK 812

Query: 232  SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             + ++ C +L  +E+   N+   ++       L   +C     + S      +L  L++ 
Sbjct: 813  ELELNECSSL--VELTFGNMTNLKN-------LDPNRCSSLVEISSSIGNMTNLVRLDLT 863

Query: 292  DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C +   LP  +GN+  L  L + G +++ ELP  +G L  L +L L+NCS L  +  +I
Sbjct: 864  GCSSLVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNI 923

Query: 351  FKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
              +KS++ +++S CS LK FPEI     F  I G+ IE IP+S+                
Sbjct: 924  -NMKSLDFLDLSYCSVLKSFPEISTNIIFLGIKGTAIEEIPTSI---------------- 966

Query: 407  CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKK 465
               +S + L+ +D    E L       + +  L +  TGI+E+   + +++ L +L +  
Sbjct: 967  ---RSWSRLDTLDMSYSENLRKSHHAFDLITNLHLSDTGIQEISPWVKEMSRLRELVING 1023

Query: 466  CSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            C+   SLP    +  SL  + + +C++  RL
Sbjct: 1024 CTKLVSLPQ---LPDSLEFMHVENCESLERL 1051



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 213/450 (47%), Gaps = 50/450 (11%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
            EL L  C     LPS      +L  L +  C +   LP  +GN+  L  L + G +++ E
Sbjct: 717  ELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSLVE 776

Query: 322  LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
            LP  +  +  L    L  CS +  +S SI  + +++ +E++ CS+L    E+ F N+   
Sbjct: 777  LPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNECSSL---VELTFGNMTNL 833

Query: 382  GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                     L  N+CS L  + SS+    +L  L++  C  L  LP  +GN+  LE L +
Sbjct: 834  -------KNLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSSLVELPYSIGNMTNLETLEL 886

Query: 442  EG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
             G + + E+P S+  L  L +L L+ CS+  +LP  + + KSL  L++  C      P+ 
Sbjct: 887  SGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNINM-KSLDFLDLSYCSVLKSFPEI 945

Query: 500  IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKLS 558
              N+ +L    IKGTAI E+P S+   S L+ L +S   NL+   +S +    + +L LS
Sbjct: 946  STNIIFL---GIKGTAIEEIPTSIRSWSRLDTLDMSYSENLR---KSHHAFDLITNLHLS 999

Query: 559  NNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLRSFPT----------SIPSEFT 604
            +  ++ I   +  +S L+ L +       +L ++P+ L               S+   F 
Sbjct: 1000 DTGIQEISPWVKEMSRLRELVINGCTKLVSLPQLPDSLEFMHVENCESLERLDSLDCSFY 1059

Query: 605  SLRLSVDLR--NCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST 662
              +L+ DLR  NCLKL+   +  I+K           T       FPG  +P +F +++T
Sbjct: 1060 RTKLT-DLRFVNCLKLNREAVDLILK-----------TSTKIWAIFPGESVPAYFSYRAT 1107

Query: 663  GSTISLKTPQ-PTGYNKLMGFAFCVVVACS 691
            GS++S+K  +  T +   + F  C+++  +
Sbjct: 1108 GSSVSMKLNRFDTRFPTSLRFKACILLVTN 1137


>gi|168042657|ref|XP_001773804.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674919|gb|EDQ61421.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 193/372 (51%), Gaps = 49/372 (13%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           +P+ ++ ++++  L +  CK+L ++ +SI  L +L++I I RC +L              
Sbjct: 2   VPNDLQYMTSLKILNLKDCKQLHSLPTSIGNLLYLKNINIGRCSSLT------------- 48

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII- 314
                             SLP+      SLT+L I  C +   LP+ELGNL +L  LI+ 
Sbjct: 49  ------------------SLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLIMW 90

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN---CSNLKGFP 371
             +++  LP  LG L  L+ L++  CS L  + + +  L S+ ++ IS+   CS+L   P
Sbjct: 91  RCSSLTSLPNELGNLTSLTTLDVSECSSLTSLPNELGNLTSLTTLNISDVNECSSLTLLP 150

Query: 372 EIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
                      +  + S + L +NKCS L SLP+ L    SLT+L I  C  +  LP+EL
Sbjct: 151 N---------ELANLTSLTTLDVNKCSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNEL 201

Query: 431 GNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           GNL +L  L + G + +  +P  L  L +L+ LK+  CSS  SLP+ L    SLT+L I 
Sbjct: 202 GNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLKIGGCSSLTSLPNELGNLTSLTTLNIG 261

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESL 546
            C +   LP+E+GNL  L  L I G +++  +P  LG L+SL  L +S  ++L  +P  L
Sbjct: 262 GCSSMTSLPNELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTTLNISGCSSLTSLPNEL 321

Query: 547 NQLSSLVSLKLS 558
             L+SL +L +S
Sbjct: 322 GNLTSLTTLNIS 333



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 171/335 (51%), Gaps = 28/335 (8%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSK-YLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
           +QY+  L++L+L  CK L SLPTSI +  YLK + +  CS+L +LP     +L S L  L
Sbjct: 6   LQYMTSLKILNLKDCKQLHSLPTSIGNLLYLKNINIGRCSSLTSLPNELG-NLTS-LTTL 63

Query: 190 GVG----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
            +G    +  LP+ +  L+++  L+++ C  L ++ + +  L  L ++ +  C +L  L 
Sbjct: 64  NIGGCSSMTSLPNELGNLTSLTTLIMWRCSSLTSLPNELGNLTSLTTLDVSECSSLTSLP 123

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
               N  G  +     +   + +C     LP+      SLT+L++  C +   LP+ELGN
Sbjct: 124 ----NELGNLTSLTTLNISDVNECSSLTLLPNELANLTSLTTLDVNKCSSLTSLPNELGN 179

Query: 306 LQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           L +L  L I G +++  LP  LG L  L+ L +  CS +  + + +  L S+ +++I  C
Sbjct: 180 LTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLKIGGC 239

Query: 365 SNLKGFPE-------IPFCNIDG-SGIERIPS--------SVLKLNKCSKLESLPSSLCM 408
           S+L   P        +   NI G S +  +P+        + L ++ CS L SLP+ L  
Sbjct: 240 SSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNISGCSSLTSLPNELGN 299

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
             SLT+L I  C  L  LP+ELGNL +L  L + G
Sbjct: 300 LTSLTTLNISGCSSLTSLPNELGNLTSLTTLNISG 334



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 59/297 (19%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD----LSLAQNLEILDLGYCSSLTETHSS 130
           S +T L +++ NL SL  +D+     LT LP+    L+    L I D+  CSSLT   + 
Sbjct: 93  SSLTSLPNELGNLTSLTTLDVSECSSLTSLPNELGNLTSLTTLNISDVNECSSLTLLPNE 152

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
           +  L  L  LD+++C SLTSLP  + +   L  L + GCS       MTS          
Sbjct: 153 LANLTSLTTLDVNKCSSLTSLPNELGNLTSLTTLNIGGCS------SMTS---------- 196

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
                 LP+ +  L+++  L I  C  + ++ + +  L  L +++I  C +L        
Sbjct: 197 ------LPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLKIGGCSSLT------- 243

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
                                   SLP+      SLT+L I  C +   LP+ELGNL +L
Sbjct: 244 ------------------------SLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSL 279

Query: 310 NRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L I G +++  LP  LG L  L+ L +  CS L  + + +  L S+ ++ IS CS
Sbjct: 280 TTLNISGCSSLTSLPNELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTTLNISGCS 336


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 188/655 (28%), Positives = 295/655 (45%), Gaps = 137/655 (20%)

Query: 209  LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ----PSSEL 264
            L +Y  K +   + +  +++ L  ++++   N    E  S N +  R   Q    PS++L
Sbjct: 548  LNLYGLKEIHYTTEAFAEMKKLRLLKVYNSHNSGDFEYASRNENYKRPFSQDFEFPSNKL 607

Query: 265  KLKKCPRP--ESLPSG----------------QCMFKSLTSLEIIDCPNFE------RLP 300
            +     R   +SLPS                 + ++K +  +E ++C +        R P
Sbjct: 608  RYLYWHRYPLKSLPSNFHPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSHSQYLVRTP 667

Query: 301  DELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
            D  G +  L RLI +G T +RE+ + LG L+ L  L LK+C  L+   SSI +L+S++ +
Sbjct: 668  DFSG-IPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSI-ELESLKVL 725

Query: 360  EISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPS 404
             +S CS L  FPEI           +DG+ I+ +P SV        L L  C +L +LPS
Sbjct: 726  ILSGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPS 785

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
            S+C  KSL++L +  C +LE+LP+ LGNLE L EL  +G+ + + P S+  + L  LK+ 
Sbjct: 786  SICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSI--VLLRNLKVL 843

Query: 465  KCSSFESLPSRLYVSK--SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VP 520
                    PS  + S+  S+  L  I      RLP  +  L  LK L +    I+E  +P
Sbjct: 844  SFQGCNGSPSSRWNSRFWSMLCLRRISDSTGFRLP-SLSGLCSLKQLNLSDCNIKEGALP 902

Query: 521  ESL-GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
              L G LSSLE+L L  N+   +P  +++L +L +L L                 L+ L 
Sbjct: 903  NDLGGYLSSLEYLNLKGNDFVTLPTGISKLCNLKALYLG------------CCKRLQELP 950

Query: 580  LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWM------K 633
            +   N++RI                      + +NC  L+   LS +    W+      +
Sbjct: 951  MLPPNINRI----------------------NAQNCTSLET--LSGLSAPCWLAFTNSFR 986

Query: 634  QSVNGETYITK-------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCV 686
            Q+   ETY+ +       + Y PGN IP+WFR+Q  G +I ++ P     +  +GFA C+
Sbjct: 987  QNWGQETYLAEVSRIPKFNTYLPGNGIPEWFRNQCMGDSIMVQLPSHWYNDNFLGFAMCI 1046

Query: 687  VVA------CSVSEC-CRHESVEDDRK---CNLFDVVCDRRSEGYDSYTSSYLGKISHVE 736
            V A      CS     C  ES + D     C L  +V +  S+G D +          VE
Sbjct: 1047 VFALKEPNQCSRGAMLCELESSDLDPSNLGCFLDHIVWEGHSDG-DGF----------VE 1095

Query: 737  SDHVFLGSSIFAGENSCKRSDEFF----FHIDRSCC------EVKKCGIHFVHAQ 781
            SDH++LG   +      K+ D  +     HI  S        EVK CG   V+ +
Sbjct: 1096 SDHLWLG---YHPNFPIKKDDMDWPNKLSHIKASFVIAGIPHEVKWCGFRLVYME 1147



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 207/431 (48%), Gaps = 50/431 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKN--------------KCMVHSLEGVPFTELRYFEWH 52
           EI      F++M +LRLLK   S N              +      E  P  +LRY  WH
Sbjct: 555 EIHYTTEAFAEMKKLRLLKVYNSHNSGDFEYASRNENYKRPFSQDFE-FPSNKLRYLYWH 613

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           ++PLK+L +  H +NLV L +    V +LW  V+++  L+ IDL +S+ L + PD S   
Sbjct: 614 RYPLKSLPSNFHPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSGIP 673

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE L    C+ L E H S+  L+KL  L+L  CK+L   P+SI  + LK L+L GCS L
Sbjct: 674 NLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESLKVLILSGCSKL 733

Query: 172 KNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
            N P+ + +      L L G  I+ELP S++ L+ +  L + +C+RL  + SSI  L+ L
Sbjct: 734 DNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSL 793

Query: 231 ESIRIHRCPNLQFLEMPSCNI--------DGTRSKEQPSS-----ELKLKKCPRPESLPS 277
            ++ +  C  L+ L     N+        DG+   + PSS      LK+         PS
Sbjct: 794 STLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPS 853

Query: 278 GQ--CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLS 333
            +    F S+  L  I      RLP  L  L +L +L +    I+E  LP  LG    LS
Sbjct: 854 SRWNSRFWSMLCLRRISDSTGFRLP-SLSGLCSLKQLNLSDCNIKEGALPNDLG--GYLS 910

Query: 334 KLELKNCSELEYIS--SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
            LE  N    ++++  + I KL +++++ +  C  L+  P +P        I RI +   
Sbjct: 911 SLEYLNLKGNDFVTLPTGISKLCNLKALYLGCCKRLQELPMLP------PNINRINAQ-- 962

Query: 392 KLNKCSKLESL 402
               C+ LE+L
Sbjct: 963 ---NCTSLETL 970


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1158

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 190/367 (51%), Gaps = 40/367 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMV----HSLEGVPFTELRYFEWHQFPLKTLNI- 61
           E+ ++P  F +M +L+ L F        +      LE +P  +LR F W  +PLK+L + 
Sbjct: 546 EVCLSPQIFERMQQLKFLNFTQHYGDEQILYLPKGLESLP-NDLRLFHWVSYPLKSLPLS 604

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV LK+P S+V +LWD +QNL  LK+IDL YSK L +LPD S A NLE ++L  C
Sbjct: 605 FCAENLVELKLPWSRVEKLWDGIQNLEHLKKIDLSYSKNLLELPDFSKASNLEEVELYSC 664

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            +L   H SI  L KL  L+L  CK+LTSL +  H + L+ L L GCS LK    +TS +
Sbjct: 665 KNLRNVHPSILSLKKLVRLNLFYCKALTSLRSDSHLRSLRDLFLGGCSRLKEFS-VTSEN 723

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           ++  L L    I ELPSSI  L  +  L +  CK L N+ + +  L+ L  + I+ C  L
Sbjct: 724 MKD-LILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVANLRSLRRLHIYGCTQL 782

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
                              +S L +        L +G    KSL +L++ +C N   +PD
Sbjct: 783 D------------------ASNLHI--------LVNG---LKSLETLKLEECRNLFEIPD 813

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            +  L +L  L++ GT I  +   +  L+ L KL+L +C  L  +      +K + +I  
Sbjct: 814 NINLLSSLRELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAI-- 871

Query: 362 SNCSNLK 368
            NCS+L+
Sbjct: 872 -NCSSLE 877



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 210/506 (41%), Gaps = 118/506 (23%)

Query: 297  ERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            E+L D + NL+ L ++ +  +  + ELP+   + + L ++EL +C  L  +  SI  LK 
Sbjct: 621  EKLWDGIQNLEHLKKIDLSYSKNLLELPD-FSKASNLEEVELYSCKNLRNVHPSILSLKK 679

Query: 356  VESIEISNC---------SNLKGFPEIPFCNIDGSGIERIPSSVLK--LNKCSKLESLPS 404
            +  + +  C         S+L+   ++            + S  +K  +   + +  LPS
Sbjct: 680  LVRLNLFYCKALTSLRSDSHLRSLRDLFLGGCSRLKEFSVTSENMKDLILTSTAINELPS 739

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
            S+   + L +L +  CK L  LP+++ NL +L  L + G           QL  S L + 
Sbjct: 740  SIGSLRKLETLTLDHCKSLSNLPNKVANLRSLRRLHIYGC---------TQLDASNLHI- 789

Query: 465  KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
                   L + L   KSL +L++ +C+N   +PD I  L  L+ L +KGT I  V  S+ 
Sbjct: 790  -------LVNGL---KSLETLKLEECRNLFEIPDNINLLSSLRELLLKGTDIESVSASIK 839

Query: 525  QLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             LS LE L LSD   L  +PE    +  L ++  S  +LE +   +  LS+++ L  +  
Sbjct: 840  HLSKLEKLDLSDCRRLYSLPELPQSIKELYAINCS--SLETV---MFTLSAVEMLHAY-- 892

Query: 584  NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYIT 643
                                   +L    +NC+KLD + LS I         VN    I 
Sbjct: 893  -----------------------KLHTTFQNCVKLDQHSLSAI--------GVNAYVNIK 921

Query: 644  KSMY---------------------FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGF 682
            K  Y                     +PG+E+P+WF +++T +++++        +K+MGF
Sbjct: 922  KVAYDQFSTIGTNSIKFLGGPVDFIYPGSEVPEWFVYRTTQASVTVDLSSSVPCSKIMGF 981

Query: 683  AFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFL 742
             FCV+V    S                     D+   G D Y  + +G+   V   H+  
Sbjct: 982  IFCVIVDQFTSN--------------------DKNYIGCDCYMETGVGE--RVTRGHMDN 1019

Query: 743  GSSIFAGENSCKRSDEFFFHIDRSCC 768
             SSI A E     SD      D  CC
Sbjct: 1020 WSSIHACEFF---SDHVCLWYDEKCC 1042


>gi|168061904|ref|XP_001782925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665597|gb|EDQ52276.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 517

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 163/498 (32%), Positives = 245/498 (49%), Gaps = 48/498 (9%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           L++  C SLT   + +  L  L  LD+ +C SLTSLP  + +   L  L +  CS+L +L
Sbjct: 1   LNIRKCFSLTSLPNELGNLISLTTLDISKCSSLTSLPNELDNLTSLTILNISSCSSLTSL 60

Query: 175 PK------------MTSCHLRSTLPL-LGVGIE-------------ELPSSIKCLSNIGE 208
           P             ++ C   + LP+ LG  I               LP+ +  L+++ +
Sbjct: 61  PNELGNLTSLIELDISKCSCLTLLPIELGNLISLTKFDISSCSYLISLPNELGNLTSLTK 120

Query: 209 LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK 268
           L I SC RL ++ + +  L  L ++ I  C +L  L     N+           EL + K
Sbjct: 121 LDISSCSRLTSLPNELGNLTSLTTLNISLCSSLTSLPNELGNLTSLI-------ELDISK 173

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLG 327
           C R   LP       SLT  +I  C +   LP+ELGNL +L  L I   +++  LP  LG
Sbjct: 174 CSRLTLLPIELGNLISLTKFDISSCLHLILLPNELGNLISLIELDISLCSSLTSLPNELG 233

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIP 387
            L  L+ L +  CS L  + + +  L S+  ++IS+CS+L   P     N+       I 
Sbjct: 234 NLTSLTTLNISQCSHLTSLPNELGNLTSLTKLDISSCSSLTSLPN-ELSNL-------IS 285

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGI 446
            + L ++ CS L SLP  L    SLT+L I  C  L  LP+ELGNL +L  L +   + +
Sbjct: 286 LTKLDISWCSSLASLPIELGNLTSLTTLNISWCSDLVSLPNELGNLISLTILDIFRCSSL 345

Query: 447 REVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             +P  L  L +L  L + +CSS  SLP+ L    SLT+L+I  C +   LP+E+GNL  
Sbjct: 346 ISLPIELGNLTSLIILNISRCSSLTSLPNELGNLISLTTLKIYWCSSLTSLPNELGNLTS 405

Query: 506 LKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNL 562
           L  L I K  ++  +P  +G L SL  L +SD ++L  +P  L  L+SL +L +S  ++L
Sbjct: 406 LTTLNISKCLSLTSLPNEIGNLISLTILDISDCSSLTSLPNELGNLTSLTTLNISKCSSL 465

Query: 563 ERIPERLDPLSSLKYLDL 580
             +P  L  L SL  LD+
Sbjct: 466 TSLPNELGKLISLTILDI 483



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 247/517 (47%), Gaps = 56/517 (10%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
            +T L +++ NL+SL  +D+     LT LP+ L    +L IL++  CSSLT   + +  L
Sbjct: 8   SLTSLPNELGNLISLTTLDISKCSSLTSLPNELDNLTSLTILNISSCSSLTSLPNELGNL 67

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPK------------MTSCH 181
             L  LD+ +C  LT LP  + +   L +  +  CS L +LP             ++SC 
Sbjct: 68  TSLIELDISKCSCLTLLPIELGNLISLTKFDISSCSYLISLPNELGNLTSLTKLDISSCS 127

Query: 182 LRSTLP--------------LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
             ++LP               L   +  LP+ +  L+++ EL I  C RL  +   +  L
Sbjct: 128 RLTSLPNELGNLTSLTTLNISLCSSLTSLPNELGNLTSLIELDISKCSRLTLLPIELGNL 187

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
             L    I  C +L  L     N+           EL +  C    SLP+      SLT+
Sbjct: 188 ISLTKFDISSCLHLILLPNELGNLISLI-------ELDISLCSSLTSLPNELGNLTSLTT 240

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYI 346
           L I  C +   LP+ELGNL +L +L I   +++  LP  L  L  L+KL++  CS L  +
Sbjct: 241 LNISQCSHLTSLPNELGNLTSLTKLDISSCSSLTSLPNELSNLISLTKLDISWCSSLASL 300

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNID---GSGIERIPSS--------V 390
              +  L S+ ++ IS CS+L   P      I    +D    S +  +P          +
Sbjct: 301 PIELGNLTSLTTLNISWCSDLVSLPNELGNLISLTILDIFRCSSLISLPIELGNLTSLII 360

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREV 449
           L +++CS L SLP+ L    SLT+L+I  C  L  LP+ELGNL +L  L +     +  +
Sbjct: 361 LNISRCSSLTSLPNELGNLISLTTLKIYWCSSLTSLPNELGNLTSLTTLNISKCLSLTSL 420

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           P  +  L +L+ L +  CSS  SLP+ L    SLT+L I  C +   LP+E+G L  L +
Sbjct: 421 PNEIGNLISLTILDISDCSSLTSLPNELGNLTSLTTLNISKCSSLTSLPNELGKLISLTI 480

Query: 509 LTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
           L I G +++  +P  LG L SL  L +S  ++L ++P
Sbjct: 481 LDISGCSSLPSLPNELGNLISLTTLNISKCSSLTLLP 517



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 151/459 (32%), Positives = 225/459 (49%), Gaps = 33/459 (7%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L  ++ NL+SL + D+     L  LP+ L    +L  LD+  CS LT   + +  
Sbjct: 79  SCLTLLPIELGNLISLTKFDISSCSYLISLPNELGNLTSLTKLDISSCSRLTSLPNELGN 138

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-------KMTSCHLRST 185
           L  L  L++  C SLTSLP  + +   L  L +  CS L  LP        +T   + S 
Sbjct: 139 LTSLTTLNISLCSSLTSLPNELGNLTSLIELDISKCSRLTLLPIELGNLISLTKFDISSC 198

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
           L L+      LP+ +  L ++ EL I  C  L ++ + +  L  L ++ I +C +L  L 
Sbjct: 199 LHLI-----LLPNELGNLISLIELDISLCSSLTSLPNELGNLTSLTTLNISQCSHLTSLP 253

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
               N+          ++L +  C    SLP+      SLT L+I  C +   LP ELGN
Sbjct: 254 NELGNLTSL-------TKLDISSCSSLTSLPNELSNLISLTKLDISWCSSLASLPIELGN 306

Query: 306 LQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           L +L  L I   + +  LP  LG L  L+ L++  CS L  +   +  L S+  + IS C
Sbjct: 307 LTSLTTLNISWCSDLVSLPNELGNLISLTILDIFRCSSLISLPIELGNLTSLIILNISRC 366

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           S+L   P     N  G+ I     + LK+  CS L SLP+ L    SLT+L I  C  L 
Sbjct: 367 SSLTSLP-----NELGNLISL---TTLKIYWCSSLTSLPNELGNLTSLTTLNISKCLSLT 418

Query: 425 RLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSL 482
            LP+E+GNL +L  L + + + +  +P  L  L +L+ L + KCSS  SLP+ L    SL
Sbjct: 419 SLPNEIGNLISLTILDISDCSSLTSLPNELGNLTSLTTLNISKCSSLTSLPNELGKLISL 478

Query: 483 TSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVP 520
           T L+I  C +   LP+E+GNL  L  L I K +++  +P
Sbjct: 479 TILDISGCSSLPSLPNELGNLISLTTLNISKCSSLTLLP 517



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 130/394 (32%), Positives = 192/394 (48%), Gaps = 32/394 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           L ++KC    SLP+      SLT+L+I  C +   LP+EL NL +L  L I   +++  L
Sbjct: 1   LNIRKCFSLTSLPNELGNLISLTTLDISKCSSLTSLPNELDNLTSLTILNISSCSSLTSL 60

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCN 377
           P  LG L  L +L++  CS L  +   +  L S+   +IS+CS L   P           
Sbjct: 61  PNELGNLTSLIELDISKCSCLTLLPIELGNLISLTKFDISSCSYLISLPNELGNLTSLTK 120

Query: 378 IDGSGIERIPS-----------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           +D S   R+ S           + L ++ CS L SLP+ L    SL  L+I  C +L  L
Sbjct: 121 LDISSCSRLTSLPNELGNLTSLTTLNISLCSSLTSLPNELGNLTSLIELDISKCSRLTLL 180

Query: 427 PDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           P ELGNL +L +  +     +  +P  L  L +L +L +  CSS  SLP+ L    SLT+
Sbjct: 181 PIELGNLISLTKFDISSCLHLILLPNELGNLISLIELDISLCSSLTSLPNELGNLTSLTT 240

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS-DNNLQII 542
           L I  C +   LP+E+GNL  L  L I   +++  +P  L  L SL  L +S  ++L  +
Sbjct: 241 LNISQCSHLTSLPNELGNLTSLTKLDISSCSSLTSLPNELSNLISLTKLDISWCSSLASL 300

Query: 543 PESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPS 601
           P  L  L+SL +L +S  ++L  +P  L  L SL  LD+F          L S P  +  
Sbjct: 301 PIELGNLTSLTTLNISWCSDLVSLPNELGNLISLTILDIFR------CSSLISLPIEL-G 353

Query: 602 EFTSLRLSVDLRNCLKLD--PNELSEIIKDGWMK 633
             TSL + +++  C  L   PNEL  +I    +K
Sbjct: 354 NLTSLII-LNISRCSSLTSLPNELGNLISLTTLK 386


>gi|168065187|ref|XP_001784536.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663917|gb|EDQ50657.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 541

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 164/514 (31%), Positives = 255/514 (49%), Gaps = 54/514 (10%)

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           +  L++L+L  C SL  LPTSI S + LK L + GC +L +LP      L + + L    
Sbjct: 1   MTSLKILNLKYCNSLRLLPTSIRSLHALKNLNIEGCLSLTSLPN----ELDNLISLTTFD 56

Query: 193 IEELPSSIKCLSN-IGELL--------IYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           IE   SS+  LSN +G L         +YS   L ++S+ +  L  L +    RC +L  
Sbjct: 57  IEGC-SSLTSLSNELGNLTSLTTFDIRLYS--SLTSLSNELGNLTSLITFDTRRCSSLTS 113

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           L     N+    +         +  C    SLP       S+T+ +   C N   LP+EL
Sbjct: 114 LPNELSNLSSLTT-------FDIGGCSSLTSLPDELDNLTSMTTFDTRGCSNLTLLPNEL 166

Query: 304 GNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            NL +L  L I + +++  LP  LG L  L+ L + +   L+ +S  ++   ++ +++I+
Sbjct: 167 DNLTSLTTLNISECSSLTSLPNELGNLTSLTTLNISDYQSLKSLSKELYNFTNLTTLKIN 226

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             S+L   P          G+  + S ++  +NKCS L SL + L    SLT+L I  C 
Sbjct: 227 KYSSLSSLPN---------GLSNLISLTIFDINKCSSLISLSNELGNLTSLTTLNISVCS 277

Query: 422 KLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVS 479
            L  LP+ELGNL +L    + E + +  +P  L  L +L+ L + KCSS  SLP+ L   
Sbjct: 278 NLILLPNELGNLTSLTTFNISECSSLISLPNELGNLTSLTTLNISKCSSLTSLPNELGNF 337

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-GTAIREVPESLGQLSSLEWLVLSD-N 537
            SLT  +I  C + + LP+E+GNL  L  L I   + +  +P  LG L+SL  L +S+ +
Sbjct: 338 ISLTIFDISKCSSLISLPNELGNLTSLTTLNISICSNLTLLPNELGNLTSLTTLNISECS 397

Query: 538 NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           +L  +P  L  L+SL +L +S  ++L  +P  LD L+SL  L+        I +Y  S  
Sbjct: 398 SLTSLPNELGNLTSLTTLSMSECSSLTSLPNELDNLTSLTTLN--------ISKY--SSL 447

Query: 597 TSIPSEFTSLR--LSVDLRNCLKLD--PNELSEI 626
           TS+P+E  +L    + D+  C  L   PNEL  +
Sbjct: 448 TSLPNELGNLTSLTTFDISYCSSLTSLPNELGNL 481



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 178/584 (30%), Positives = 265/584 (45%), Gaps = 94/584 (16%)

Query: 18  MTELRLL--KFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI----------LHWE 65
           MT L++L  K+C        +SL  +P T +R        LK LNI             +
Sbjct: 1   MTSLKILNLKYC--------NSLRLLP-TSIRSLH----ALKNLNIEGCLSLTSLPNELD 47

Query: 66  NLVSLK---MPG-SKVTQLWDDVQNLVSLKRIDLK-YSKLLTKLPDLSLAQNLEILDLGY 120
           NL+SL    + G S +T L +++ NL SL   D++ YS L +   +L    +L   D   
Sbjct: 48  NLISLTTFDIEGCSSLTSLSNELGNLTSLTTFDIRLYSSLTSLSNELGNLTSLITFDTRR 107

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           CSSLT   + +  L+ L   D+  C SLTSLP  + +   +     RGCSNL        
Sbjct: 108 CSSLTSLPNELSNLSSLTTFDIGGCSSLTSLPDELDNLTSMTTFDTRGCSNLT------- 160

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                           LP+ +  L+++  L I  C  L ++ + +  L  L ++ I    
Sbjct: 161 ---------------LLPNELDNLTSLTTLNISECSSLTSLPNELGNLTSLTTLNISDYQ 205

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           +L+ L     N     +       LK+ K     SLP+G     SLT  +I  C +   L
Sbjct: 206 SLKSLSKELYNFTNLTT-------LKINKYSSLSSLPNGLSNLISLTIFDINKCSSLISL 258

Query: 300 PDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            +ELGNL +L  L I   + +  LP  LG L  L+   +  CS L  + + +  L S+ +
Sbjct: 259 SNELGNLTSLTTLNISVCSNLILLPNELGNLTSLTTFNISECSSLISLPNELGNLTSLTT 318

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + IS CS+L   P     N  G+ I     ++  ++KCS L SLP+ L    SLT+L I 
Sbjct: 319 LNISKCSSLTSLP-----NELGNFISL---TIFDISKCSSLISLPNELGNLTSLTTLNIS 370

Query: 419 DCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
            C  L  LP+ELGNL +L  L + E + +  +P  L  L +L+ L + +CSS  SLP+ L
Sbjct: 371 ICSNLTLLPNELGNLTSLTTLNISECSSLTSLPNELGNLTSLTTLSMSECSSLTSLPNEL 430

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS 535
               SLT+L I    +   LP+E+GNL  L    I   +++  +P  LG LSSL      
Sbjct: 431 DNLTSLTTLNISKYSSLTSLPNELGNLTSLTTFDISYCSSLTSLPNELGNLSSLTTF--- 487

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
                     + + SSL+SL          P  LD ++SL   D
Sbjct: 488 ---------DIGRYSSLISL----------PNELDNITSLTTFD 512



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 5/114 (4%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDL-KYSKLLTKLPD-LSLAQNLEILDLG 119
           +  +L +L M   S +T L +++ NL SL  +++ KYS L T LP+ L    +L   D+ 
Sbjct: 408 NLTSLTTLSMSECSSLTSLPNELDNLTSLTTLNISKYSSL-TSLPNELGNLTSLTTFDIS 466

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLK 172
           YCSSLT   + +  L+ L   D+ R  SL SLP  + +   L     RGCS+L 
Sbjct: 467 YCSSLTSLPNELGNLSSLTTFDIGRYSSLISLPNELDNITSLTTFDTRGCSSLT 520



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLE 114
           L TLNI  +          S +T L +++ NL SL   D+ Y   LT LP+ L    +L 
Sbjct: 436 LTTLNISKY----------SSLTSLPNELGNLTSLTTFDISYCSSLTSLPNELGNLSSLT 485

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
             D+G  SSL    + +  +  L   D   C SLTS    I ++ LKR
Sbjct: 486 TFDIGRYSSLISLPNELDNITSLTTFDTRGCSSLTSSSKEIVNQILKR 533


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 275/565 (48%), Gaps = 86/565 (15%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS-LT 125
           L SL +  + +T L + ++ L +L+R+D+ +S  +  LPD S+ +   + DL   S+ LT
Sbjct: 107 LQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFI-NLPD-SIGEMPNLQDLNVSSTDLT 164

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS--CHL 182
              +SI  L +L+ LD+     LTSLP SI     LK L + G ++L  LP       +L
Sbjct: 165 TLPASIGQLTRLQHLDVSST-GLTSLPDSIGQLSMLKHLDVSG-TDLATLPDSIGQLTNL 222

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
           +  L +    +  LP SI  LS++  L + S   L+ +  SI +L  L+ +         
Sbjct: 223 KH-LDVSSTSLNTLPDSIGQLSSLQHLDV-SGTSLQTLPDSIGQLSSLQHL--------- 271

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
                  ++ GTR +  P S ++L                 SL  L++ D  +   LPD 
Sbjct: 272 -------DVSGTRLQILPDSIVQLS----------------SLQHLDVSDT-SINNLPDS 307

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G L  L  L +  T++  LP+ +GQL+ L  LE+ + S L  +  +I++L S++ + +S
Sbjct: 308 IGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDAS-LNTLPETIWRLSSLQDLNLS 366

Query: 363 NCS-----------------NLKG-----FPE-------IPFCNIDGSGIERIPSSVLKL 393
                               NL G      PE       +   N+ G+G+  +P ++ +L
Sbjct: 367 GTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQL 426

Query: 394 NKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
           N         + L +LP ++C   SL  L +     L  LP  +  L +L++L + GTG+
Sbjct: 427 NSLQDLNLSGTGLTTLPEAICQLNSLQDLNL-SGTGLTTLPGAICQLNSLQDLNLSGTGL 485

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLE 504
             +P+++ QL      +   ++  +LP  L     L++LE ++  N   + LPD IG L 
Sbjct: 486 TTLPETIGQLTNLNNLMASNTALTTLPDTL---GQLSNLEFLNISNTSLVTLPDSIGLLS 542

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
           +L++L +  T +  +PES+GQL+SLE L +S+  L  +PES+ +L++L  L +SN +L  
Sbjct: 543 HLQILFVSDTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTDLTS 602

Query: 565 IPERLDPLSSLKYLDLFENNLDRIP 589
           +PE +  L SL  L++    L  +P
Sbjct: 603 LPESIGQLKSLIKLNVSNTGLTSLP 627



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 171/323 (52%), Gaps = 18/323 (5%)

Query: 285 LTSLEI--IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           LT LE   I   + ++LP+ +G L  L  L +  TA+  LP  + QL+ L +L++ + S 
Sbjct: 81  LTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDI-SFSG 139

Query: 343 LEYISSSIFKLKSVESIEISNC------SNLKGFPEIPFCNIDGSGIERIPSSVLKLN-- 394
              +  SI ++ +++ + +S+       +++     +   ++  +G+  +P S+ +L+  
Sbjct: 140 FINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSML 199

Query: 395 -----KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
                  + L +LP S+    +L  L++     L  LPD +G L +L+ L V GT ++ +
Sbjct: 200 KHLDVSGTDLATLPDSIGQLTNLKHLDV-SSTSLNTLPDSIGQLSSLQHLDVSGTSLQTL 258

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S+ QL+  +      +  + LP  +    SL  L++ D  +   LPD IG L  L+ L
Sbjct: 259 PDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDT-SINNLPDSIGQLSNLQHL 317

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +  T++  +P+S+GQLS+L+ L +SD +L  +PE++ +LSSL  L LS   L  +PE L
Sbjct: 318 DVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEAL 377

Query: 570 DPLSSLKYLDLFENNLDRIPEYL 592
             LSSL+ L+L    L  +PE +
Sbjct: 378 CQLSSLQDLNLSGTGLTTLPEAI 400



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 17/324 (5%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             +L SL I   P    LP  L  L  L  L I GT++++LPE +G+L  L  L +   +
Sbjct: 58  LTNLKSLTIASNP-ITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTA 116

Query: 342 ELEYISSSIFKLKSVESIEIS-----NCSNLKG-FPEIPFCNIDGSGIERIPSSVLKLNK 395
            L  + +SI +L ++  ++IS     N  +  G  P +   N+  + +  +P+S+ +L +
Sbjct: 117 -LTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTR 175

Query: 396 CSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
              L+       SLP S+     L  L++     L  LPD +G L  L+ L V  T +  
Sbjct: 176 LQHLDVSSTGLTSLPDSIGQLSMLKHLDV-SGTDLATLPDSIGQLTNLKHLDVSSTSLNT 234

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +P S+ QL+  +      +S ++LP  +    SL  L++   +    LPD I  L  L+ 
Sbjct: 235 LPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTR-LQILPDSIVQLSSLQH 293

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L +  T+I  +P+S+GQLS+L+ L +SD +L  +P+S+ QLS+L  L++S+ +L  +PE 
Sbjct: 294 LDVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPET 353

Query: 569 LDPLSSLKYLDLFENNLDRIPEYL 592
           +  LSSL+ L+L    L  +PE L
Sbjct: 354 IWRLSSLQDLNLSGTGLTTLPEAL 377



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 210/460 (45%), Gaps = 60/460 (13%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILHWENLVS 69
           P +  ++T L+ L    +    +  S+     + L++ +     L+TL  +I    +L  
Sbjct: 213 PDSIGQLTNLKHLDVSSTSLNTLPDSIG--QLSSLQHLDVSGTSLQTLPDSIGQLSSLQH 270

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ--NLEILDLGYCS--SLT 125
           L + G+++  L D +  L SL+ +D+  +  +  LPD S+ Q  NL+ LD+   S  +L 
Sbjct: 271 LDVSGTRLQILPDSIVQLSSLQHLDVSDTS-INNLPD-SIGQLSNLQHLDVSDTSLNTLP 328

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           ++   +  L  LEV D     SL +LP +I     L+ L L G + L  LP+   C L S
Sbjct: 329 DSIGQLSNLQHLEVSD----ASLNTLPETIWRLSSLQDLNLSG-TGLTTLPEAL-CQLSS 382

Query: 185 --TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L G G+  LP +I  L+++ +L + S   L  +  +I +L  L+ + +     L 
Sbjct: 383 LQDLNLSGTGLTTLPEAICQLNSLQDLNL-SGTGLTTLPEAICQLNSLQDLNLSGT-GLT 440

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            L    C ++  +      + L         +LP   C   SL  L  +       LP+ 
Sbjct: 441 TLPEAICQLNSLQDLNLSGTGLT--------TLPGAICQLNSLQDLN-LSGTGLTTLPET 491

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G L  LN L+   TA+  LP+ LGQL+ L  L + N S L  +  SI  L  ++ + +S
Sbjct: 492 IGQLTNLNNLMASNTALTTLPDTLGQLSNLEFLNISNTS-LVTLPDSIGLLSHLQILFVS 550

Query: 363 NCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           + ++L   PE       +   N+  +G+  +P S+ +                   LT+L
Sbjct: 551 D-TDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGR-------------------LTNL 590

Query: 416 EIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSL 453
           +I++     L  LP+ +G L++L +L V  TG+  +P S+
Sbjct: 591 QILNVSNTDLTSLPESIGQLKSLIKLNVSNTGLTSLPMSI 630



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP ++  L  LK LTI    I  +P+ L  L+ LE L +S  +L+ +PE + +L  L SL
Sbjct: 51  LPLDLPPLTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSL 110

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            +S   L  +P  +  LS+L+ LD+  +    +P+ +   P
Sbjct: 111 YVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMP 151


>gi|168032877|ref|XP_001768944.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679856|gb|EDQ66298.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 516

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 247/519 (47%), Gaps = 54/519 (10%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL  + +     LT LP+ L    +L   ++G CSSLT   + +  
Sbjct: 5   SSLTSLPNELGNLTSLTTLRMNECSSLTSLPNELDNLISLTTFNIGRCSSLTSLPNELGN 64

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L   D+ RC SLTSLP  + +   L    +  CS+L +LP                 
Sbjct: 65  LKSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPN---------------- 108

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
             EL + I     +    +  CK L ++ + +  L  L +  +    +L  L     N+ 
Sbjct: 109 --ELGNLIS----LTTFRMNGCKSLISLPNELGNLTSLTTFDLTGSSSLTSLPNELGNV- 161

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQAL 309
                 +  + +++ +C    SLP+    F +LTSL I D   C +   LP ELGNL +L
Sbjct: 162 ------KSLTIIRMIECSSLTSLPN---KFGNLTSLTIFDIKGCSSLTSLPIELGNLISL 212

Query: 310 NRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
               +   +++  LP  LG L  L+ L +  CS L  + + +  L S+ +  I  CS+L 
Sbjct: 213 TISKMKWCSSLTSLPNELGNLTSLTTLRMNECSSLTSLPNELGNLTSLTTFNIGRCSSLT 272

Query: 369 GFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
             P           ++ + S +   + +CS L SLP+ L    SLT+ +I  C  L  LP
Sbjct: 273 SLPN---------ELDNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGSCSSLTSLP 323

Query: 428 DELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           +ELGNL +L    +   + +  +P  +  L +L+ L+ K CSS  SLP+ L   KSLT+ 
Sbjct: 324 NELGNLTSLITFDIGRCSSLTSLPNEIGNLISLTTLRKKGCSSLTSLPNELGNLKSLTTF 383

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD--NNLQII 542
           +I  C +   LP+E+GNL  LK   I+  +++  +P  LG L SL  L ++   ++L  +
Sbjct: 384 DIRRCSSLTSLPNELGNLTSLKTFDIQWCSSLTSLPNELGNLKSLTTLNMNGRCSSLTSL 443

Query: 543 PESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           P  L  L+SL +  +   ++L  +P  L  L+SL   D+
Sbjct: 444 PNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDI 482



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 231/493 (46%), Gaps = 42/493 (8%)

Query: 63  HWENLVSLKM-PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L +L+M   S +T L +++ NL+SL   ++     LT LP+ L   ++L   D+G 
Sbjct: 16  NLTSLTTLRMNECSSLTSLPNELDNLISLTTFNIGRCSSLTSLPNELGNLKSLTTFDIGR 75

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-KMT 178
           CSSLT   + +  L  L   D+ RC SLTSLP  + +   L    + GC +L +LP ++ 
Sbjct: 76  CSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLISLTTFRMNGCKSLISLPNELG 135

Query: 179 SCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           +    +T  L G   +  LP+ +  + ++  + +  C  L ++ +    L  L    I  
Sbjct: 136 NLTSLTTFDLTGSSSLTSLPNELGNVKSLTIIRMIECSSLTSLPNKFGNLTSLTIFDIKG 195

Query: 238 CPNLQFLEMPSCN-IDGTRSKEQPSSEL----------------KLKKCPRPESLPSGQC 280
           C +L  L +   N I  T SK +  S L                ++ +C    SLP+   
Sbjct: 196 CSSLTSLPIELGNLISLTISKMKWCSSLTSLPNELGNLTSLTTLRMNECSSLTSLPNELG 255

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
              SLT+  I  C +   LP+EL NL +L    I   +++  LP  LG L  L+  ++ +
Sbjct: 256 NLTSLTTFNIGRCSSLTSLPNELDNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGS 315

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNIDGSGIERIPS------ 388
           CS L  + + +  L S+ + +I  CS+L   P      I    +   G   + S      
Sbjct: 316 CSSLTSLPNELGNLTSLITFDIGRCSSLTSLPNEIGNLISLTTLRKKGCSSLTSLPNELG 375

Query: 389 -----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                +   + +CS L SLP+ L    SL + +I  C  L  LP+ELGNL++L  L + G
Sbjct: 376 NLKSLTTFDIRRCSSLTSLPNELGNLTSLKTFDIQWCSSLTSLPNELGNLKSLTTLNMNG 435

Query: 444 --TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             + +  +P  L  L +L+   + +CSS  SLP+ L    SLT+ +I  C +   LP+E+
Sbjct: 436 RCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNEL 495

Query: 501 GNLEYLKVLTIKG 513
           GNL  L    + G
Sbjct: 496 GNLISLTTFRMNG 508



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 205/438 (46%), Gaps = 44/438 (10%)

Query: 67  LVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L + +M G K +  L +++ NL SL   DL  S  LT LP+ L   ++L I+ +  CSSL
Sbjct: 116 LTTFRMNGCKSLISLPNELGNLTSLTTFDLTGSSSLTSLPNELGNVKSLTIIRMIECSSL 175

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           T   +    L  L + D+  C SLTSLP  I    L  L +          KM  C    
Sbjct: 176 TSLPNKFGNLTSLTIFDIKGCSSLTSLP--IELGNLISLTIS---------KMKWCS--- 221

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                   +  LP+ +  L+++  L +  C  L ++ + +  L  L +  I RC +L   
Sbjct: 222 -------SLTSLPNELGNLTSLTTLRMNECSSLTSLPNELGNLTSLTTFNIGRCSSLT-- 272

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            +P+  +D   S     +   + +C    SLP+      SLT+ +I  C +   LP+ELG
Sbjct: 273 SLPN-ELDNLTSL----TTFDIGRCSSLTSLPNELGNLTSLTTFDIGSCSSLTSLPNELG 327

Query: 305 NLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           NL +L    I   +++  LP  +G L  L+ L  K CS L  + + +  LKS+ + +I  
Sbjct: 328 NLTSLITFDIGRCSSLTSLPNEIGNLISLTTLRKKGCSSLTSLPNELGNLKSLTTFDIRR 387

Query: 364 CSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIID-CK 421
           CS+L   P           +  + S     +  CS L SLP+ L   KSLT+L +   C 
Sbjct: 388 CSSLTSLPN---------ELGNLTSLKTFDIQWCSSLTSLPNELGNLKSLTTLNMNGRCS 438

Query: 422 KLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVS 479
            L  LP+ELGNL +L    +   + +  +P  L  L +L+   + +CSS  SLP+ L   
Sbjct: 439 SLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNL 498

Query: 480 KSLTSLEIIDCKNFMRLP 497
            SLT+  +  CK+ + LP
Sbjct: 499 ISLTTFRMNGCKSLISLP 516



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 150/318 (47%), Gaps = 21/318 (6%)

Query: 66  NLVSLKMPG----SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           NL+SL +      S +T L +++ NL SL  + +     LT LP+ L    +L   ++G 
Sbjct: 208 NLISLTISKMKWCSSLTSLPNELGNLTSLTTLRMNECSSLTSLPNELGNLTSLTTFNIGR 267

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           CSSLT   + +  L  L   D+ RC SLTSLP  + +   L    +  CS+L +LP    
Sbjct: 268 CSSLTSLPNELDNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGSCSSLTSLPNELG 327

Query: 180 CHLRSTLPLLGVG----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
            +L S L    +G    +  LP+ I  L ++  L    C  L ++ + +  L+ L +  I
Sbjct: 328 -NLTS-LITFDIGRCSSLTSLPNEIGNLISLTTLRKKGCSSLTSLPNELGNLKSLTTFDI 385

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID-CP 294
            RC +L  L     N+   ++         ++ C    SLP+     KSLT+L +   C 
Sbjct: 386 RRCSSLTSLPNELGNLTSLKT-------FDIQWCSSLTSLPNELGNLKSLTTLNMNGRCS 438

Query: 295 NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           +   LP+ELGNL +L    I   +++  LP  LG L  L+  ++  CS L  + + +  L
Sbjct: 439 SLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNL 498

Query: 354 KSVESIEISNCSNLKGFP 371
            S+ +  ++ C +L   P
Sbjct: 499 ISLTTFRMNGCKSLISLP 516



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 63  HWENLVSLKMPG--SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLG 119
           + ++L +L M G  S +T L +++ NL SL   D+     LT LP+ L    +L   D+G
Sbjct: 424 NLKSLTTLNMNGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTFDIG 483

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP 152
            CSSLT   + +  L  L    ++ CKSL SLP
Sbjct: 484 RCSSLTSLPNELGNLISLTTFRMNGCKSLISLP 516


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 230/497 (46%), Gaps = 101/497 (20%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
             S  +I  PNF  +P+       L RL+++G T+  E+   +  L  L  L LKNC +L 
Sbjct: 539  NSQHLIHLPNFSSMPN-------LERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLR 591

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV------- 390
                SI KL+ ++ + +S CS+LK FPEI           +DG+ I  +P S+       
Sbjct: 592  SFPRSI-KLECLKYLSLSGCSDLKNFPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLI 650

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
             L L  C +L+SLPSS+C  KSL +L +  C KLE  P+ + N+E L++L ++GT ++++
Sbjct: 651  LLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQL 710

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
              S+  L  L  L L+ C +  +LP  +   KSL +L +  C    +LP+ +G+L+ L  
Sbjct: 711  HPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVK 770

Query: 509  LTIKGTAIREVPESLGQLSSLE---------------------WLV-------------- 533
            L   GT +R+ P S+  L +LE                     WL+              
Sbjct: 771  LQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPS 830

Query: 534  -----------LSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
                       +SD NL    +P  +  LSSL +L LS NN   +P  +  LS L++L L
Sbjct: 831  LSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKLRFLSL 890

Query: 581  FE-NNLDRIPEYLRSF----------------PTSIPSEFTSLR-LSVDLRNCLKLDP-- 620
                +L +IPE   S                 P+S+ +     R L   L NC  LD   
Sbjct: 891  NHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVCRWLVFTLPNCFNLDAEN 950

Query: 621  ---NELSEI-----IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
               N+++ I     I    +++  N       S++ PG+EIP W  +Q+ GS ++++ P 
Sbjct: 951  PCSNDMAIISPRMQIVTNMLQKLQNFLPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPP 1010

Query: 673  PTGYNKLMGFAFCVVVA 689
                +  +GFA C V A
Sbjct: 1011 HWFESNFLGFAVCCVFA 1027



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 145/425 (34%), Positives = 211/425 (49%), Gaps = 51/425 (12%)

Query: 71  KMPGSKVTQLWDDVQNLVSLKR---------IDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           K PG K ++LWD       LK+         I+L  S+ L  LP+ S   NLE L L  C
Sbjct: 505 KDPG-KWSRLWDYEHIYSVLKKNTVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGC 563

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC- 180
           +S  E   SI+ LNKL  L+L  CK L S P SI  + LK L L GCS+LKN P++    
Sbjct: 564 TSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPRSIKLECLKYLSLSGCSDLKNFPEIQGNM 623

Query: 181 -HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
            HL S L L G  I ELP SI  L+ +  L + +CKRL+++ SSI KL+ LE++ +  C 
Sbjct: 624 QHL-SELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACS 682

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            L+       N++  +      + LK +  P  E L         L SL + DC N   L
Sbjct: 683 KLESFPEIMENMEHLKKLLLDGTALK-QLHPSIEHL-------NGLVSLNLRDCKNLATL 734

Query: 300 PDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           P  +GNL++L  LI+ G + +++LPE LG L  L KL+  + + +    SSI  L+++E 
Sbjct: 735 PCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQ-ADGTLVRQPPSSIVLLRNLEI 793

Query: 359 IEISNC--------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
           +    C        S+L  F  +P  + D  G++ +PS               S LC   
Sbjct: 794 LSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQ-LPS--------------LSGLC--- 835

Query: 411 SLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS 468
           SL  L+I DC  +E  +P ++ NL +LE L +       +P  +++L+ L  L L  C S
Sbjct: 836 SLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKS 895

Query: 469 FESLP 473
              +P
Sbjct: 896 LLQIP 900



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 24/256 (9%)

Query: 342 ELEYISSSIFK---LKSVESIEISNCSNLKGFPEIP---------------FCNIDGSGI 383
           + E+I S + K   L ++ +IE+SN  +L   P                  F  +D S I
Sbjct: 515 DYEHIYSVLKKNTVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGCTSFLEVDPS-I 573

Query: 384 ERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           E +   + L L  C KL S P S+   + L  L +  C  L+  P+  GN++ L EL ++
Sbjct: 574 EVLNKLIFLNLKNCKKLRSFPRSI-KLECLKYLSLSGCSDLKNFPEIQGNMQHLSELYLD 632

Query: 443 GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
           GT I E+P S+  L  L  L L+ C   +SLPS +   KSL +L +  C      P+ + 
Sbjct: 633 GTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIME 692

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN- 559
           N+E+LK L + GTA++++  S+  L+ L  L L D  NL  +P S+  L SL +L +S  
Sbjct: 693 NMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGC 752

Query: 560 NNLERIPERLDPLSSL 575
           + L+++PE L  L  L
Sbjct: 753 SKLQQLPENLGSLQCL 768



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 136/318 (42%), Gaps = 65/318 (20%)

Query: 54  FPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQN 112
           FP    N+ H   L  L + G+ +++L   +  L  L  +DL+  K L  LP  +   ++
Sbjct: 616 FPEIQGNMQH---LSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKS 672

Query: 113 LEILDLGYCS-----------------------SLTETHSSIQYLNKLEVLDLDRCKSLT 149
           LE L L  CS                       +L + H SI++LN L  L+L  CK+L 
Sbjct: 673 LETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLA 732

Query: 150 SLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +LP SI + K L+ L++ GCS L+ LP+ + S      L   G  + + PSSI  L N+ 
Sbjct: 733 TLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLE 792

Query: 208 ELLIYSCKRLE-NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
            L    CK L  N  SS+F    L      +  +   L++PS                  
Sbjct: 793 ILSFGGCKGLASNSWSSLFSFWLLP----RKSSDTIGLQLPSL----------------- 831

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEG 325
                     SG C   SL  L+I DC   E  +P ++ NL +L  L +       LP G
Sbjct: 832 ----------SGLC---SLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPAG 878

Query: 326 LGQLALLSKLELKNCSEL 343
           + +L+ L  L L +C  L
Sbjct: 879 ISKLSKLRFLSLNHCKSL 896


>gi|297835804|ref|XP_002885784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331624|gb|EFH62043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 673

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 187/714 (26%), Positives = 316/714 (44%), Gaps = 117/714 (16%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           PY+      L++L+  G  +             EL +   +   L+ L + ++ +LV   
Sbjct: 36  PYSIGNAIYLKILELSGCSS-----------LVELPFSIGNAINLQDLYLSNFSSLV--- 81

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSS 130
                  +L   ++N  +L+++DL     L +LP  L  A NL+ L L  CSSL +  SS
Sbjct: 82  -------ELPSSIENATTLRKLDLSGCSSLVELPSSLGSAINLQDLYLINCSSLVKLPSS 134

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
           I+     ++LDL  C SL  LP+SI +           +NL+ L     C L        
Sbjct: 135 IRNAANHKILDLSGCSSLVELPSSIGNA----------TNLQTLNLSNCCRLV------- 177

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
               ELPSSI   +N+  L +  C  L  + SSI     L+++ +  C  L  +E+PS  
Sbjct: 178 ----ELPSSIGNATNLQTLNLSGCSSLVELPSSIGNATNLQTLNLRNC--LSLVELPS-- 229

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG---NLQ 307
              +  K      L L  C R   LP+      +L +L + DC +  +LP  +G   +LQ
Sbjct: 230 ---SIGKATNLQTLNLSDCHRLVELPTSIGNATNLQTLNLRDCLSLAQLPSSIGKATHLQ 286

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           +LN  +   T++ ELP  +G      KL L  C+ L  + SSI  + +++++ + +C   
Sbjct: 287 SLN--LSYCTSLVELPSLIGNATSFQKLNLSYCTSLVRLPSSIGNVSNLQTLNLRDC--- 341

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF------KSLTSLEIIDCK 421
           K   E+P      S I  +    L +  CS L  LPSS+  F       ++ S     C 
Sbjct: 342 KSLVELP------SSIGNLTKLDLDIRGCSSLVELPSSIGNFIMNQDGGNIYSFN--TCT 393

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
            L ++P  +GN   LE L   G + + +VP S+  L  L  L   +CSS   +P+ +   
Sbjct: 394 SLLQIPSSIGNAIKLESLNFYGCSSLVDVPASIGNLINLDVLVFSECSSLVEVPTCIGNL 453

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NN 538
            +LT L+   C + + +P  IGNL  L++L +KG +  E+      L SL+ LVLS  ++
Sbjct: 454 INLTYLDFNGCSSLVAIPASIGNLHKLRMLAMKGCSKLEILPGNVNLKSLDRLVLSGCSS 513

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
           L+  PE     +++  L LS   +E +P  +     L+ LD+  +    + E+L + P S
Sbjct: 514 LRCFPE---ISTNIRELYLSGTAIEVVPSFIWSCLRLETLDM--SYCKNLKEFLHT-PDS 567

Query: 599 IPSEFTSLR-----------------------LSVDLRNCLKLDPNELSEIIKDGWMKQS 635
           I    +  +                       +S++  NC KL+      II+       
Sbjct: 568 ITGHDSKRKKVSPFAENCESLERLYSSCHNPYISLNFDNCFKLNQEARDLIIQTS----- 622

Query: 636 VNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
                  T+    PG +IP +F ++++G ++ +K  +    + L+ F  C+++ 
Sbjct: 623 -------TQLTVLPGGDIPTYFTYRASGGSLVVKLKERPFCSTLI-FKVCIILV 668



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 159/550 (28%), Positives = 254/550 (46%), Gaps = 78/550 (14%)

Query: 93  IDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP 152
           ++L+ S  L +LPDLS A NL+ L L  C SL E   SI     L++L+L  C SL  LP
Sbjct: 1   MNLRSSHYLNELPDLSTATNLQELYLNGCISLVELPYSIGNAIYLKILELSGCSSLVELP 60

Query: 153 TSI-------------------------HSKYLKRLVLRGCSNLKNLPKM--TSCHLRST 185
            SI                         ++  L++L L GCS+L  LP    ++ +L+  
Sbjct: 61  FSIGNAINLQDLYLSNFSSLVELPSSIENATTLRKLDLSGCSSLVELPSSLGSAINLQDL 120

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
             +    + +LPSSI+  +N   L +  C  L  + SSI     L+++ +  C   + +E
Sbjct: 121 YLINCSSLVKLPSSIRNAANHKILDLSGCSSLVELPSSIGNATNLQTLNLSNC--CRLVE 178

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG- 304
           +PS   + T  +      L L  C     LPS      +L +L + +C +   LP  +G 
Sbjct: 179 LPSSIGNATNLQ-----TLNLSGCSSLVELPSSIGNATNLQTLNLRNCLSLVELPSSIGK 233

Query: 305 --NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
             NLQ LN  + D   + ELP  +G    L  L L++C  L  + SSI K   ++S+ +S
Sbjct: 234 ATNLQTLN--LSDCHRLVELPTSIGNATNLQTLNLRDCLSLAQLPSSIGKATHLQSLNLS 291

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
            C++L   P +     + +  ++     L L+ C+ L  LPSS+    +L +L + DCK 
Sbjct: 292 YCTSLVELPSLIG---NATSFQK-----LNLSYCTSLVRLPSSIGNVSNLQTLNLRDCKS 343

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSK-----LKLKKCSSFESLPSRL 476
           L  LP  +GNL  L +L + G + + E+P S+    +++          C+S   +PS +
Sbjct: 344 LVELPSSIGNLTKL-DLDIRGCSSLVELPSSIGNFIMNQDGGNIYSFNTCTSLLQIPSSI 402

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLS 535
             +  L SL    C + + +P  IGNL  L VL   + +++ EVP  +G L +L +L   
Sbjct: 403 GNAIKLESLNFYGCSSLVDVPASIGNLINLDVLVFSECSSLVEVPTCIGNLINLTYL--- 459

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENN-----LDRIP- 589
                      N  SSLV++  S  NL ++  R+  +     L++   N     LDR+  
Sbjct: 460 ---------DFNGCSSLVAIPASIGNLHKL--RMLAMKGCSKLEILPGNVNLKSLDRLVL 508

Query: 590 ---EYLRSFP 596
                LR FP
Sbjct: 509 SGCSSLRCFP 518


>gi|10177708|dbj|BAB11082.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1145

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 203/384 (52%), Gaps = 37/384 (9%)

Query: 7   EIQINPYTFSKMTELRLLK-----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           E+ ++   F  M+ LR L+     F  +    +  SL+ +P   L+   W  FP++ + +
Sbjct: 541 ELYVHESAFKGMSNLRFLEIDSKNFGKAGRLYLPESLDYLP-PRLKLLCWPNFPMRCMPS 599

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV+LKMP SK+ +LW+ V +L  LK +D+  S  L ++PDLS+  NLEIL LG+
Sbjct: 600 NFRPENLVTLKMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGF 659

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ LNKL  LD++ C SL  LPT  + K L  L  R CS L+  P+ ++ 
Sbjct: 660 CKSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPEFSTN 719

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI----YSCKRLENISSSIFKLQF----LES 232
              S L L G  IEE P+    L N+ EL +       K+ + +      L+     L+S
Sbjct: 720 --ISVLMLFGTNIEEFPN----LENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKS 773

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           +++   P+L  +E+PS   +  + K     EL +  C   E+LP+G    KSL  L    
Sbjct: 774 LKLENIPSL--VELPSSFQNLNQLK-----ELSITYCRNLETLPTG-INLKSLNYLCFKG 825

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C      P+   N+  LN   ++ T I E+P  +     L+KL +++CS+L+ +S +I K
Sbjct: 826 CSQLRSFPEISTNISVLN---LEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPK 882

Query: 353 LKSVESIEISNCS-----NLKGFP 371
           +K++  ++ S+C+     NL G+P
Sbjct: 883 MKTLWDVDFSDCAALTVVNLSGYP 906



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 196/475 (41%), Gaps = 90/475 (18%)

Query: 279 QCMFKSLTSLEI--IDCPNFER-----LPDELGNLQA-LNRLIIDGTAIRELPEGLGQLA 330
           +  FK +++L    ID  NF +     LP+ L  L   L  L      +R +P       
Sbjct: 546 ESAFKGMSNLRFLEIDSKNFGKAGRLYLPESLDYLPPRLKLLCWPNFPMRCMPSNFRPEN 605

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-----------FCNID 379
           L++ L++ N S+L  +   +  L  ++ +++   SNLK  P++            FC   
Sbjct: 606 LVT-LKMPN-SKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGFC--- 660

Query: 380 GSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
              +  +PSS+  LNK        C  LE LP+   + KSL  L    C +L   P+   
Sbjct: 661 -KSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNL-KSLDHLNFRYCSELRTFPEFST 718

Query: 432 NLEALEELRVEGTGIREVP--KSLAQLALSK---------------------------LK 462
           N+  L    + GT I E P  ++L +L+LSK                           LK
Sbjct: 719 NISVL---MLFGTNIEEFPNLENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLK 775

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPE 521
           L+   S   LPS       L  L I  C+N   LP  I NL+ L  L  KG + +R  PE
Sbjct: 776 LENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGI-NLKSLNYLCFKGCSQLRSFPE 834

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL-SNNNLERIPERLDPLSSLKYLDL 580
               +S L    L +  ++ +P  +    +L  L + S + L+ +   +  + +L  +D 
Sbjct: 835 ISTNISVLN---LEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMKTLWDVD- 890

Query: 581 FENNLDRIPEYLRSFPTSIPSE--FTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG 638
           F +        L  +P+   SE    SL   +D R C  LDP  +            ++ 
Sbjct: 891 FSDCAALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPETV------------LHQ 938

Query: 639 ETYITKSMYFPGNEIPKWFRHQSTG-STISLKTP-QPTGYNK-LMGFAFCVVVAC 690
           E+ I  SM FPG ++P +F +++TG STI    P  PT  ++    F  C V   
Sbjct: 939 ESVIFNSMAFPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRVCAVATA 993



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 3/154 (1%)

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
           L+  L+ L L    SL E  SS Q LN+L+ L +  C++L +LPT I+ K L  L  +GC
Sbjct: 767 LSPTLKSLKLENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGINLKSLNYLCFKGC 826

Query: 169 SNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           S L++ P++++    S L L   GIEE+P  I+   N+ +L + SC +L+ +S +I K++
Sbjct: 827 SQLRSFPEISTN--ISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMK 884

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
            L  +    C  L  + +     D T S+E+  S
Sbjct: 885 TLWDVDFSDCAALTVVNLSGYPSD-TLSEEEDDS 917


>gi|240256404|ref|NP_199439.5| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
 gi|332007978|gb|AED95361.1| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
          Length = 1139

 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 203/384 (52%), Gaps = 37/384 (9%)

Query: 7   EIQINPYTFSKMTELRLLK-----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           E+ ++   F  M+ LR L+     F  +    +  SL+ +P   L+   W  FP++ + +
Sbjct: 552 ELYVHESAFKGMSNLRFLEIDSKNFGKAGRLYLPESLDYLP-PRLKLLCWPNFPMRCMPS 610

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV+LKMP SK+ +LW+ V +L  LK +D+  S  L ++PDLS+  NLEIL LG+
Sbjct: 611 NFRPENLVTLKMPNSKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGF 670

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ LNKL  LD++ C SL  LPT  + K L  L  R CS L+  P+ ++ 
Sbjct: 671 CKSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPEFSTN 730

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI----YSCKRLENISSSIFKLQF----LES 232
              S L L G  IEE P+    L N+ EL +       K+ + +      L+     L+S
Sbjct: 731 --ISVLMLFGTNIEEFPN----LENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKS 784

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           +++   P+L  +E+PS   +  + K     EL +  C   E+LP+G    KSL  L    
Sbjct: 785 LKLENIPSL--VELPSSFQNLNQLK-----ELSITYCRNLETLPTG-INLKSLNYLCFKG 836

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C      P+   N+  LN   ++ T I E+P  +     L+KL +++CS+L+ +S +I K
Sbjct: 837 CSQLRSFPEISTNISVLN---LEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPK 893

Query: 353 LKSVESIEISNCS-----NLKGFP 371
           +K++  ++ S+C+     NL G+P
Sbjct: 894 MKTLWDVDFSDCAALTVVNLSGYP 917



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 196/475 (41%), Gaps = 90/475 (18%)

Query: 279  QCMFKSLTSLEI--IDCPNFER-----LPDELGNLQA-LNRLIIDGTAIRELPEGLGQLA 330
            +  FK +++L    ID  NF +     LP+ L  L   L  L      +R +P       
Sbjct: 557  ESAFKGMSNLRFLEIDSKNFGKAGRLYLPESLDYLPPRLKLLCWPNFPMRCMPSNFRPEN 616

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-----------FCNID 379
            L++ L++ N S+L  +   +  L  ++ +++   SNLK  P++            FC   
Sbjct: 617  LVT-LKMPN-SKLHKLWEGVASLTCLKEMDMVGSSNLKEIPDLSMPTNLEILKLGFC--- 671

Query: 380  GSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
               +  +PSS+  LNK        C  LE LP+   + KSL  L    C +L   P+   
Sbjct: 672  -KSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNL-KSLDHLNFRYCSELRTFPEFST 729

Query: 432  NLEALEELRVEGTGIREVP--KSLAQLALSK---------------------------LK 462
            N+  L    + GT I E P  ++L +L+LSK                           LK
Sbjct: 730  NISVL---MLFGTNIEEFPNLENLVELSLSKEESDGKQWDGVKPLTPFLEMLSPTLKSLK 786

Query: 463  LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPE 521
            L+   S   LPS       L  L I  C+N   LP  I NL+ L  L  KG + +R  PE
Sbjct: 787  LENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGI-NLKSLNYLCFKGCSQLRSFPE 845

Query: 522  SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL-SNNNLERIPERLDPLSSLKYLDL 580
                +S L    L +  ++ +P  +    +L  L + S + L+ +   +  + +L  +D 
Sbjct: 846  ISTNISVLN---LEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMKTLWDVD- 901

Query: 581  FENNLDRIPEYLRSFPTSIPSE--FTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG 638
            F +        L  +P+   SE    SL   +D R C  LDP  +            ++ 
Sbjct: 902  FSDCAALTVVNLSGYPSDTLSEEEDDSLDPFLDFRGCFSLDPETV------------LHQ 949

Query: 639  ETYITKSMYFPGNEIPKWFRHQSTG-STISLKTP-QPTGYNK-LMGFAFCVVVAC 690
            E+ I  SM FPG ++P +F +++TG STI    P  PT  ++    F  C V   
Sbjct: 950  ESVIFNSMAFPGEQVPSYFTYRTTGTSTILPNIPLLPTQLSQPFFRFRVCAVATA 1004



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 3/154 (1%)

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
           L+  L+ L L    SL E  SS Q LN+L+ L +  C++L +LPT I+ K L  L  +GC
Sbjct: 778 LSPTLKSLKLENIPSLVELPSSFQNLNQLKELSITYCRNLETLPTGINLKSLNYLCFKGC 837

Query: 169 SNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           S L++ P++++    S L L   GIEE+P  I+   N+ +L + SC +L+ +S +I K++
Sbjct: 838 SQLRSFPEISTN--ISVLNLEETGIEEVPWQIENFFNLTKLTMRSCSKLKCLSLNIPKMK 895

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
            L  +    C  L  + +     D T S+E+  S
Sbjct: 896 TLWDVDFSDCAALTVVNLSGYPSD-TLSEEEDDS 928


>gi|224284598|gb|ACN40032.1| unknown [Picea sitchensis]
          Length = 1071

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 232/498 (46%), Gaps = 47/498 (9%)

Query: 46   LRYFEWHQFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
            L Y  W  +P  +L   L   NL  L + G ++  LW   ++   L+  +L  +  L+K+
Sbjct: 596  LIYLRWENYPKSSLPPSLPSMNLRVLHIQGKQLKTLWQH-ESQAPLQLRELYVNAPLSKV 654

Query: 105  PD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKR 162
            P+ +   + LE + L Y  S+T    S+ +L  L+ LDL  C +L  LP S+ +   L++
Sbjct: 655  PESIGTLKYLEKIVL-YNGSMTLLPDSVGHLTGLQTLDLIGCSTLQMLPDSVGNLTGLQK 713

Query: 163  LVLRGCSNLKNLPKMTSCHLRSTLPLLGVG----IEELPSSIKCLSNIGELLIYSCKRLE 218
            L L  CS L+ LP   S    + L  L +G    ++ LP S+  L+ +  L +  C  L+
Sbjct: 714  LDLSWCSTLQMLPD--SVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIECSTLQ 771

Query: 219  NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
             +  S+  L  L+++ + RC  LQ L     N+ G ++       L L  C   ++LP  
Sbjct: 772  TLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQT-------LYLSGCSTLQTLPDS 824

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
                  L +L +  C   + LPD +GNL  L  L +D  + ++ LP+ +G L  L  L+L
Sbjct: 825  VGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSLQTLDL 884

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
              CS L+ +  S+  L  ++++ +S CS L+  P+  F N+ G          L L  CS
Sbjct: 885  DGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPD-SFGNLTGL-------QTLNLIGCS 936

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
             L++LP S      L +L +I C  L+ LPD +GNL  L+ L + G    +         
Sbjct: 937  TLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSVGNLTGLQILYLGGCFTLQ--------- 987

Query: 458  LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
                      + ++LP  +     L +L +        LPD I NL  LK LT+ G  + 
Sbjct: 988  ----------TLQTLPDLVGTLTGLQTLYLDGYSTLQMLPDSIWNLMGLKRLTLAGATLC 1037

Query: 518  EVPESLGQLSSLEWLVLS 535
               + +G L+ L+ L L+
Sbjct: 1038 RRSQ-VGNLTGLQTLHLT 1054



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 173/323 (53%), Gaps = 25/323 (7%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           ++ P   ++P+ +G L+ L ++++   ++  LP+ +G L  L  L+L  CS L+ +  S+
Sbjct: 647 VNAP-LSKVPESIGTLKYLEKIVLYNGSMTLLPDSVGHLTGLQTLDLIGCSTLQMLPDSV 705

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDG---------SGIERIPSSV--------LKL 393
             L  ++ +++S CS L+  P+    N+ G         S ++ +P SV        L L
Sbjct: 706 GNLTGLQKLDLSWCSTLQMLPD-SVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDL 764

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
            +CS L++LP S+     L +L +  C  L+ LPD +GNL  L+ L + G + ++ +P S
Sbjct: 765 IECSTLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDS 824

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L L  CS+ ++LP  +     L +L +  C     LPD +GNL+ L+ L +
Sbjct: 825 VGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSLQTLDL 884

Query: 512 KG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
            G + ++ +P+S+G L+ L+ L LS  + LQ +P+S   L+ L +L L   + L+ +P+ 
Sbjct: 885 DGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDS 944

Query: 569 LDPLSSLKYLDLFE-NNLDRIPE 590
              L+ L+ L+L   + L  +P+
Sbjct: 945 FGNLTGLQTLNLIGCSTLQTLPD 967


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 199/396 (50%), Gaps = 40/396 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV----------------PFTELRYFE 50
           ++Q N    SKM +LRLLK    ++   V     +                P  ELRY  
Sbjct: 529 QMQFNTKVLSKMNKLRLLKVYWRRHYGHVRKDYKLTLPENFKLILPENFEFPSYELRYLY 588

Query: 51  WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
           W ++ LK+L +    ENLV +K+P S + QLW   + L  LK +DL  SK L +LP+ S 
Sbjct: 589 WERYSLKSLPSNFKGENLVKIKLPNSNIRQLWQGNKCLGKLKVLDLSDSKQLIELPNFSN 648

Query: 110 AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGC 168
             NLE L L  C SL +  SSI+ L  L VLDL  CK LTSLP+ + +   L+ L L GC
Sbjct: 649 ISNLEKLILHNCRSLDKIDSSIEVLKNLNVLDLSWCKKLTSLPSGMQYLDSLEILNLNGC 708

Query: 169 SNLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
           SNL+  PK+     +    + L G  I+ELP SI  L+ +  L +  CK + ++ SSI  
Sbjct: 709 SNLEKFPKIRWSFRKGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGS 768

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L+ L+ + +  C NL+    P    D    +    SE  +K+ P     P+ Q + K L 
Sbjct: 769 LKSLQLLYLQGCSNLE--TFPEITEDMASLELLSLSETAIKELP-----PTIQHL-KQLR 820

Query: 287 SLEIIDCPNFERLP-------DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            L +  C   E+ P       D L NL   NR ++DG     +P  +  L+LL  L L+ 
Sbjct: 821 LLFVGGCSRLEKFPKILESLKDSLINLDLSNRNLMDGA----IPNEIWCLSLLEILNLRR 876

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            +   +I ++I +L+ +  ++IS+C  L+GFPE+P 
Sbjct: 877 -NNFRHIPAAITQLRKLTLLKISHCKMLQGFPEVPL 911



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 171/364 (46%), Gaps = 60/364 (16%)

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG----IEELPSSIKC 202
           SL SLP++   + L ++ L   SN++ L +   C     L +L +     + ELP+    
Sbjct: 593 SLKSLPSNFKGENLVKIKLPN-SNIRQLWQGNKC--LGKLKVLDLSDSKQLIELPN-FSN 648

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
           +SN+ +L++++C+ L+ I SSI  L+           NL  L+                 
Sbjct: 649 ISNLEKLILHNCRSLDKIDSSIEVLK-----------NLNVLD----------------- 680

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL-QALNRLIIDGTAIRE 321
              L  C +  SLPSG     SL  L +  C N E+ P    +  + L  + +DGT I+E
Sbjct: 681 ---LSWCKKLTSLPSGMQYLDSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDGTPIKE 737

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  +  L L+  L + +C  +  + SSI  LKS++ + +  CSNL+ FPEI     D +
Sbjct: 738 LPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSNLETFPEI---TEDMA 794

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP-------DELGNLE 434
            +E     +L L++ + ++ LP ++   K L  L +  C +LE+ P       D L NL+
Sbjct: 795 SLE-----LLSLSETA-IKELPPTIQHLKQLRLLFVGGCSRLEKFPKILESLKDSLINLD 848

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
                 ++G     +P  +  L+L ++   + ++F  +P+ +   + LT L+I  CK   
Sbjct: 849 LSNRNLMDGA----IPNEIWCLSLLEILNLRRNNFRHIPAAITQLRKLTLLKISHCKMLQ 904

Query: 495 RLPD 498
             P+
Sbjct: 905 GFPE 908



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 206/532 (38%), Gaps = 108/532 (20%)

Query: 303  LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            LG L+ L+  + D   + ELP     ++ L KL L NC  L+ I SSI  LK++  +++S
Sbjct: 626  LGKLKVLD--LSDSKQLIELP-NFSNISNLEKLILHNCRSLDKIDSSIEVLKNLNVLDLS 682

Query: 363  NCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             C  L   P         SG++ + S  +L LN CS LE  P     F+           
Sbjct: 683  WCKKLTSLP---------SGMQYLDSLEILNLNGCSNLEKFPKIRWSFR----------- 722

Query: 422  KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK-LKLKKCSSFESLPSRLYVSK 480
                        + L+E+R++GT I+E+P S+  L L K L +  C +  SL S +   K
Sbjct: 723  ------------KGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLK 770

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV------- 533
            SL  L +  C N    P+   ++  L++L++  TAI+E+P ++  L  L  L        
Sbjct: 771  SLQLLYLQGCSNLETFPEITEDMASLELLSLSETAIKELPPTIQHLKQLRLLFVGGCSRL 830

Query: 534  ------------------LSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
                              LS+ NL    IP  +  LS L  L L  NN   IP  +  L 
Sbjct: 831  EKFPKILESLKDSLINLDLSNRNLMDGAIPNEIWCLSLLEILNLRRNNFRHIPAAITQLR 890

Query: 574  SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK 633
             L  L +    +      L+ FP  +P    SL+  ++  +C  L+            + 
Sbjct: 891  KLTLLKISHCKM------LQGFP-EVP---LSLK-HIEAHDCTSLETLSSPSSKLWSSLL 939

Query: 634  QSVNGETYITK-------SMYFPGNE-IPKWFRHQSTGSTISLKTPQPT-GYNKLMGFA- 683
            Q      +           +  PG+  IP W  HQ     + ++ P      N  +GF  
Sbjct: 940  QWFKSAKFQDHEAQPKCAGIMIPGSSGIPGWVLHQEMEREVRIELPMNWCKDNHFLGFVL 999

Query: 684  FCVVVACSVSECCRHE-SVEDDR------KCNLFDVVCDRRSEGY----DSYTSSYLGKI 732
            FC+           ++  + DD       +   F   CD     Y    D    +Y  KI
Sbjct: 1000 FCLYQDNGTDPYLSYDLRLHDDEDSYEAVRRGWFGCQCDYYPNIYSGVLDELWVTYHPKI 1059

Query: 733  SHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQRQR 784
            S  E  H           N  K     F  +  +   +K CGIH +++Q  +
Sbjct: 1060 SIPEKYH----------SNQFKHIQTSFSAL--TVGVIKSCGIHLIYSQDHQ 1099



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 30/280 (10%)

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEY 345
           S ++I+ PNF        N+  L +LI+    ++ ++   +  L  L+ L+L  C +L  
Sbjct: 637 SKQLIELPNF-------SNISNLEKLILHNCRSLDKIDSSIEVLKNLNVLDLSWCKKLTS 689

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPF--------CNIDGSGIERIPSSV------- 390
           + S +  L S+E + ++ CSNL+ FP+I +          +DG+ I+ +P S+       
Sbjct: 690 LPSGMQYLDSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDGTPIKELPFSIDDLTLVK 749

Query: 391 -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            L +  C  + SL SS+   KSL  L +  C  LE  P+   ++ +LE L +  T I+E+
Sbjct: 750 ILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSNLETFPEITEDMASLELLSLSETAIKEL 809

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRL-YVSKSLTSLEIIDCKNFM--RLPDEIGNLEY 505
           P ++  L  L  L +  CS  E  P  L  +  SL +L++ + +N M   +P+EI  L  
Sbjct: 810 PPTIQHLKQLRLLFVGGCSRLEKFPKILESLKDSLINLDLSN-RNLMDGAIPNEIWCLSL 868

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPE 544
           L++L ++    R +P ++ QL  L  L +S    LQ  PE
Sbjct: 869 LEILNLRRNNFRHIPAAITQLRKLTLLKISHCKMLQGFPE 908



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 7/188 (3%)

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
           C+ K L  L++ D K+L  LP+   N+  LE+L +     + ++  S+  L  L+ L L 
Sbjct: 625 CLGK-LKVLDLSDSKQLIELPN-FSNISNLEKLILHNCRSLDKIDSSIEVLKNLNVLDLS 682

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL-EYLKVLTIKGTAIREVPESL 523
            C    SLPS +    SL  L +  C N  + P    +  + LK + + GT I+E+P S+
Sbjct: 683 WCKKLTSLPSGMQYLDSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDGTPIKELPFSI 742

Query: 524 GQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLF 581
             L+ ++ L + D  N++ +  S+  L SL  L L   +NLE  PE  + ++SL+ L L 
Sbjct: 743 DDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSNLETFPEITEDMASLELLSLS 802

Query: 582 ENNLDRIP 589
           E  +  +P
Sbjct: 803 ETAIKELP 810


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 164/578 (28%), Positives = 264/578 (45%), Gaps = 59/578 (10%)

Query: 239  PNLQFLEMPSC-NIDGTRSKEQPSS---ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            PNL+ L +  C  + G  S  + S+   EL L +C    +LPS       L  L++I C 
Sbjct: 621  PNLEVLNLGQCRGLAGLPSSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCR 680

Query: 295  NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
            +   LPD +G L++L  L +   + +  LP    +L  L KL L  CSEL  +  +I +L
Sbjct: 681  SLASLPDSIGELKSLEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGEL 740

Query: 354  KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            KS+  +++ +CS L+  P          G++ +    L L+  SKL SLP+S+   K L 
Sbjct: 741  KSLVELKLFSCSKLESLPN------SIGGLKCLAE--LCLSNFSKLTSLPNSIGKLKCLV 792

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFES 471
             L +    KL  LPD  G L++L  L +     +  +P S+ QL  L++L L  CS   +
Sbjct: 793  KLNLSYFSKLASLPDCFGELKSLVLLHISFCPKLVSLPNSIGQLKCLAELNLSGCSELAN 852

Query: 472  LPSRLYVSKSLTSLEIIDCKNFMRLP---------DEIGNLEYLKVLTIKGTAIREVPES 522
            LP+ +Y  +SL  + +  C    + P         +EI     L+ L +  + + E+P S
Sbjct: 853  LPNSIYYLESLKWINLERCYMLNKSPVLNPRCSEVEEIAFGGCLQYLNLGASGVSEIPGS 912

Query: 523  LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLKYL 578
            +G L SL  L LS N+ + IP ++ QL  L+ L L       +L  +P  L  L +   +
Sbjct: 913  IGSLVSLRDLRLSCNDFERIPANIKQLPMLIKLDLHGCERLQHLPELPSSLQVLMASYCI 972

Query: 579  DLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW-----MK 633
             L           L S       E+ +     +  NCLKLD N  + I++D       M 
Sbjct: 973  SL---------RSLASIFIQGGKEYAAASQQFNFSNCLKLDQNACNRIMEDVHLRIRRMA 1023

Query: 634  QSVNGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTP----QPTGYNKLMGFAFC 685
             S+    Y  K +      PG E+P+WF +++TG + SL  P    + T  ++ +GF FC
Sbjct: 1024 SSLFNREYFGKPIRVRLCIPGLEVPEWFCYKNTGGS-SLNIPAHWHRTTNTDQFLGFTFC 1082

Query: 686  VVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSS 745
             VV+   S+  +   V    +C+L     ++    +  Y      +    E DHVF    
Sbjct: 1083 AVVSFGNSK--KKRPVNIRCECHLITQGGNQSDLNFYCYEEVERKERCLWEGDHVF---- 1136

Query: 746  IFAGENSC--KRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
            I++  ++C  K +   F  +  +   V KCG+H +  Q
Sbjct: 1137 IWSINSNCFFKEASFHFKQLWGTADVVVKCGVHPLFVQ 1174



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 244/532 (45%), Gaps = 91/532 (17%)

Query: 4   INSEIQINPYTFSKMTELRLLKFC-------GSKNKCM------VHSLEGVPF--TELRY 48
           I  E+ ++P  F  M+ LRLLKF         SK K M      +H  +G+ F   ELR 
Sbjct: 497 ITKEMILSPTAFEGMSNLRLLKFYYPPFFGDPSKEKIMNRRRVRIHLPQGLHFLSNELRI 556

Query: 49  FEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
             W+ +PLK+L +    E LV   M  S++ QLW++ Q L +LK ++L+ S  L+     
Sbjct: 557 LHWYNYPLKSLPSNFCPEKLVEFHMHCSQLEQLWNEFQPLKNLKVMNLRSSSKLSLSDSD 616

Query: 108 SLA-QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
                NLE+L+LG C  L    SSI+Y  +L  L L RC SL++LP+SI           
Sbjct: 617 LSKFPNLEVLNLGQCRGLAGLPSSIKYSTRLTELILYRCDSLSTLPSSI----------- 665

Query: 167 GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
           GC  L  L K+     RS        +  LP SI  L ++ +L +Y C +L ++ +S  +
Sbjct: 666 GC--LSQLVKLKLIFCRS--------LASLPDSIGELKSLEDLYLYFCSKLASLPNSFRE 715

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L+ L  + + RC  L                                SLP      KSL 
Sbjct: 716 LKCLVKLNLIRCSELV-------------------------------SLPDNIGELKSLV 744

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEY 345
            L++  C   E LP+ +G L+ L  L +   + +  LP  +G+L  L KL L   S+L  
Sbjct: 745 ELKLFSCSKLESLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLAS 804

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPS 404
           +     +LKS+  + IS C  L   P         + I ++   + L L+ CS+L +LP+
Sbjct: 805 LPDCFGELKSLVLLHISFCPKLVSLP---------NSIGQLKCLAELNLSGCSELANLPN 855

Query: 405 SLCMFKSLTSLEIIDCKKLERLP---------DELGNLEALEELRVEGTGIREVPKSLAQ 455
           S+   +SL  + +  C  L + P         +E+     L+ L +  +G+ E+P S+  
Sbjct: 856 SIYYLESLKWINLERCYMLNKSPVLNPRCSEVEEIAFGGCLQYLNLGASGVSEIPGSIGS 915

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
           L +L  L+L  C+ FE +P+ +     L  L++  C+    LP+   +L+ L
Sbjct: 916 LVSLRDLRL-SCNDFERIPANIKQLPMLIKLDLHGCERLQHLPELPSSLQVL 966



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 17/212 (8%)

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV----EGTGIREVPK 451
           CS+LE L +    F+ L +L++++ +   +L     +L     L V    +  G+  +P 
Sbjct: 583 CSQLEQLWNE---FQPLKNLKVMNLRSSSKLSLSDSDLSKFPNLEVLNLGQCRGLAGLPS 639

Query: 452 SLA-QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           S+     L++L L +C S  +LPS +     L  L++I C++   LPD IG L+ L+ L 
Sbjct: 640 SIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDSIGELKSLEDLY 699

Query: 511 IKG-TAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLNQLSSLVSLKL-SNNNLERIPE 567
           +   + +  +P S  +L  L  L ++  + L  +P+++ +L SLV LKL S + LE +P 
Sbjct: 700 LYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGELKSLVELKLFSCSKLESLPN 759

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
            +  L  L  L L  +N  +    L S P SI
Sbjct: 760 SIGGLKCLAELCL--SNFSK----LTSLPNSI 785


>gi|297794611|ref|XP_002865190.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311025|gb|EFH41449.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1127

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 198/369 (53%), Gaps = 26/369 (7%)

Query: 7   EIQINPYTFSKMTELRLLKF----CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL- 59
           E+ I+  +F  M  L  LK        K +   H  E   +  ++LR   + ++PLK L 
Sbjct: 546 ELHIHESSFKGMHNLLFLKIYTKKLDQKKEVRWHLPERFNYLPSKLRLLRFDRYPLKRLP 605

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +  H ENLV L+M  SK+ +LW+ V +L  L+ +DL+ SK L ++PDLS+A NLE L L 
Sbjct: 606 SNFHPENLVKLQMQQSKLEKLWEGVHSLAGLRNMDLRGSKNLKEIPDLSMATNLETLKLS 665

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            CSSL E  SSIQYLNKL  LD+  C  L ++PT ++ K L RL L GCS LK+   ++ 
Sbjct: 666 SCSSLVELPSSIQYLNKLNDLDISYCDHLETIPTGVNLKSLYRLNLSGCSRLKSFLDIS- 724

Query: 180 CHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
               + +  L +    E+PS+++ L N+ EL++  C+R++ + + +  +      R+   
Sbjct: 725 ----TNISWLDIDQTAEIPSNLR-LQNLDELIL--CERVQ-LRTPLMTMLSPTLTRLTFS 776

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            N   +E+PS +I      E     L++  C    +LP+G    +SL +L++  C     
Sbjct: 777 NNQSLVEVPS-SIQNLNQLEH----LEIMNCRNLVTLPTG-INLESLIALDLSHCSQLRT 830

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            PD   N+  L    +  TAI E+P  + +L+LL  L++  CS L  +S +I KLK +E 
Sbjct: 831 FPDISTNISDLK---LSYTAIEEVPLWIEKLSLLCNLDMNGCSNLLRVSPNISKLKHLEG 887

Query: 359 IEISNCSNL 367
            + S+C  L
Sbjct: 888 ADFSDCVAL 896



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 190/422 (45%), Gaps = 60/422 (14%)

Query: 296  FERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
             E+L + + +L  L  + + G+  ++E+P+ L     L  L+L +CS L  + SSI  L 
Sbjct: 623  LEKLWEGVHSLAGLRNMDLRGSKNLKEIPD-LSMATNLETLKLSSCSSLVELPSSIQYLN 681

Query: 355  SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
             +  ++IS C +L+  P         +G+       L L+ CS+L+S           T+
Sbjct: 682  KLNDLDISYCDHLETIP---------TGVNLKSLYRLNLSGCSRLKSF------LDISTN 726

Query: 415  LEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            +  +D  +   +P  L  L+ L+EL + E   +R    ++    L++L      S   +P
Sbjct: 727  ISWLDIDQTAEIPSNL-RLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNQSLVEVP 785

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL 532
            S +     L  LEI++C+N + LP  I NLE L  L +   + +R  P+    +S L+  
Sbjct: 786  SSIQNLNQLEHLEIMNCRNLVTLPTGI-NLESLIALDLSHCSQLRTFPDISTNISDLK-- 842

Query: 533  VLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD------LFENNL 585
             LS   ++ +P  + +LS L +L ++  +NL R+   +  L  L+  D      L E + 
Sbjct: 843  -LSYTAIEEVPLWIEKLSLLCNLDMNGCSNLLRVSPNISKLKHLEGADFSDCVALTEASW 901

Query: 586  DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS 645
            +     +  F    P  F++++L  +  NC  LD            +K  +  +T+ +  
Sbjct: 902  NGSSSEMAKFLP--PDYFSTVKL--NFINCFNLD------------LKALIQNQTF-SMQ 944

Query: 646  MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV----------VACSVSEC 695
            +   G E+P +F H++TGS+ISL  P  +       F  C V          V+  +  C
Sbjct: 945  LILSGEEVPSYFAHRTTGSSISL--PHISVCQSFFSFRGCTVIDVESFSTISVSFDIEVC 1002

Query: 696  CR 697
            CR
Sbjct: 1003 CR 1004


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 133/349 (38%), Positives = 178/349 (51%), Gaps = 45/349 (12%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI 61
           SK  S+I++ P TFS+M  LR LKF   K K  +  L+  P  ELR+ +W+ FP+K+L  
Sbjct: 516 SKATSKIRLRPDTFSRMYHLRFLKFYTEKVKISLDGLQSFP-NELRHLDWNDFPMKSLPP 574

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               +NLV L +  SKV +LW   QNLV LK IDL +SK L  +PDLS A N+E + L  
Sbjct: 575 NFSPQNLVVLNLRDSKVKKLWTGTQNLVKLKEIDLSHSKYLIGIPDLSKAINIEKIYLTG 634

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           CSSL E HSS+QYLNKLE LDL  C  L SLP  I S  LK L L G   +K   +    
Sbjct: 635 CSSLEEVHSSLQYLNKLEFLDLGDCNKLRSLPRRIDSNVLKVLKL-GSPRVKRCREFKGN 693

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELL---IYSCKRLENISSSIFKLQFLESIRIHR 237
            L  TL L    I+ + S I  + N   L+   +Y+C++L  + SS +K++ L S     
Sbjct: 694 QLE-TLNLYCPAIKNVASIISSILNSSRLVHLSVYNCRKLSILPSSFYKMKSLRS----- 747

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
                 L++  C I     K+ PSS   L +                L +L + DC   E
Sbjct: 748 ------LDLAYCAI-----KQIPSSIEHLSQ----------------LIALNLTDCKYLE 780

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL-LSKLELKNCSELE 344
            LP  +G L  L  + ++   ++R LPE    L L L  L   NC  LE
Sbjct: 781 SLPSSIGGLPRLATMYLNSCESLRSLPE----LPLSLRMLFANNCKSLE 825



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 195/438 (44%), Gaps = 60/438 (13%)

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L  ++ I++S+   L G P++         IE+I      L  CS LE + SSL     L
Sbjct: 601 LVKLKEIDLSHSKYLIGIPDLS----KAINIEKI-----YLTGCSSLEEVHSSLQYLNKL 651

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA-QLALSKLKLKKCSSFES 471
             L++ DC KL  LP  + +   L+ L++    ++   +    QL    L      +  S
Sbjct: 652 EFLDLGDCNKLRSLPRRIDS-NVLKVLKLGSPRVKRCREFKGNQLETLNLYCPAIKNVAS 710

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           + S +  S  L  L + +C+    LP     ++ L+ L +   AI+++P S+  LS L  
Sbjct: 711 IISSILNSSRLVHLSVYNCRKLSILPSSFYKMKSLRSLDLAYCAIKQIPSSIEHLSQLIA 770

Query: 532 LVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L L+D   L+ +P S+  L  L ++ L++  +L  +PE   PL SL+   LF NN     
Sbjct: 771 LNLTDCKYLESLPSSIGGLPRLATMYLNSCESLRSLPEL--PL-SLRM--LFANNC---- 821

Query: 590 EYLRSFPTSIPSE-FTSLR-LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY 647
                   S+ SE  TS R L V   NCL+L  ++ +  + D  +  +V G  Y      
Sbjct: 822 -------KSLESESITSNRHLLVTFANCLRLRFDQTALQMTDFLVPTNVPGRFY----WL 870

Query: 648 FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSV-SECC-RHESVEDDR 705
           +PG+E+P WF +QS GS++++++  P     L   AFC+V      S CC + E  ED  
Sbjct: 871 YPGSEVPGWFSNQSMGSSVTMQS--PLNMYMLNAIAFCIVFEFKKPSYCCFKVECAEDHA 928

Query: 706 KCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDR 765
           K             G   ++ S L K  HV    +   +       S + +  F+F+  +
Sbjct: 929 KATF--------GSG-QIFSPSILAKTDHV----LIWFNCTRELYKSTRIASSFYFYHSK 975

Query: 766 SC--------CEVKKCGI 775
                     C+VK+CG 
Sbjct: 976 DADKEESLKHCKVKRCGF 993


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 210/789 (26%), Positives = 340/789 (43%), Gaps = 171/789 (21%)

Query: 1    MSKINSEI-QINPYTFSKMTELRLLKFCG---------------SKNKCM----VHSLEG 40
            +SK   E+  I+     +M+ L+ ++F G               S N C     V++L+ 
Sbjct: 554  LSKNGEEVTNISEKGLQRMSNLQFIRFDGRSCARHSSNLTVVRSSDNNCAHPDTVNALQD 613

Query: 41   V--PFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKY 97
            +   F E+R   W  F    L +  + E LV L MP S    LW+  + L +LK +DL Y
Sbjct: 614  LNYQFQEIRLLHWINFRRLCLPSTFNPEFLVELNMPSSTCHTLWEGSKALRNLKWMDLSY 673

Query: 98   SKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS 157
            S  L +LPDLS A NLE L L YCS                 LDL+ C SL  LP+SI +
Sbjct: 674  SISLKELPDLSTATNLEELILKYCS-----------------LDLNECSSLVELPSSIGN 716

Query: 158  KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
                        NL+NL     C     L LL     +LP SI   +N+ + ++  C   
Sbjct: 717  AI----------NLQNLD--LGC-----LRLL-----KLPLSIVKFTNLKKFILNGC--- 751

Query: 218  ENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
                SS+ +L F+ +       NLQ L++ +C           SS ++L         PS
Sbjct: 752  ----SSLVELPFMGN-----ATNLQNLDLGNC-----------SSLVEL---------PS 782

Query: 278  GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID---GTAIRELPEGLGQLALLSK 334
                  +L +L++ +C +  +LP  +GN  A N  I+D    +++ E+P  +G +  L +
Sbjct: 783  SIGNAINLQNLDLSNCSSLVKLPSFIGN--ATNLEILDLRKCSSLVEIPTSIGHVTNLWR 840

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
            L+L  CS L  + SS+  +  ++ + + NCSNL   P   F +   + + R     L L+
Sbjct: 841  LDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPS-SFGH--ATNLWR-----LDLS 892

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             CS L  LPSS+    +L  L + +C  L +LP  +GNL  L                  
Sbjct: 893  GCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLL------------------ 934

Query: 455  QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                  L L +C   E+LPS + + KSL  L++ DC  F   P+   N+E    L + GT
Sbjct: 935  ----FTLSLARCQKLEALPSNINL-KSLERLDLTDCSQFKSFPEISTNIE---CLYLDGT 986

Query: 515  AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            A+ EVP S+   S L   VL  +  + + E  + L  +  L+    +++ +   +  +S 
Sbjct: 987  AVEEVPSSIKSWSRLT--VLHMSYFEKLKEFSHVLDIITWLEFG-EDIQEVAPWIKEISR 1043

Query: 575  LKYLDLFEN----NLDRIPEYLRSFPTSIPSEFTSLRLS-------VDLRNCLKLDPNEL 623
            L  L L++     +L ++PE L            +L  S       ++   C KL+    
Sbjct: 1044 LHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCSYNNPLSLLNFAKCFKLNQEAR 1103

Query: 624  SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQS-TGSTISLK-TPQPTGYNKLMG 681
              II           +   +     PG E+P +F H++ TG+++++K   +P   +  M 
Sbjct: 1104 DFII-----------QIPTSNDAVLPGAEVPAYFTHRATTGASLTIKLNERPISTS--MR 1150

Query: 682  FAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVF 741
            F  C+V+       C ++   DD    +  V    +  G     S  +  I  + ++H++
Sbjct: 1151 FKACIVLI-----KCDNDEAGDDGSSLMVHVDIMDKQNGLSVPYSPGIYTIYPLLTEHLY 1205

Query: 742  LGSSIFAGE 750
                IF GE
Sbjct: 1206 ----IFQGE 1210


>gi|147841230|emb|CAN68969.1| hypothetical protein VITISV_043153 [Vitis vinifera]
          Length = 1074

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 221/502 (44%), Gaps = 68/502 (13%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNKCMVHSLE-------GVPFTELRYFEWHQFPLKT 58
           +IQ+N   +  M +LR LK + G  +  M  + +         P  ELRY  W  +PL+T
Sbjct: 349 DIQVNKKVYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDXEFPSQELRYLYWEAYPLQT 408

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +  + ENLV L M  S + QLW   + L  LK IDL  S+LLTK+P+    + L    
Sbjct: 409 LPSNFNGENLVELHMRNSTIKQLWKGRKVLGKLKIIDLSDSRLLTKMPNYQACRILRSST 468

Query: 118 LGYC---SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI----HSKYLK--------- 161
             +    S + E  SSI+YL  LE L L  C++      +     H ++++         
Sbjct: 469 SPFVKGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQEL 528

Query: 162 -----------RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELL 210
                       L L  CSNL+N P++        L L    I+ELP++  CL  +  L 
Sbjct: 529 PNSFGYLESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNAFGCLEALQFLY 588

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP 270
           +  C   E       ++Q + S+R  R       E+P C+I G  +K +   +L L+ C 
Sbjct: 589 LSGCSNFEEFP----EIQNMGSLRFLRLNETAIKELP-CSI-GHLTKLR---DLNLENCK 639

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
              SLP+  C  KSL  L I  C N    P+ + +++ L  L++  T I ELP  +  L 
Sbjct: 640 NLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLK 699

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------------EIPFCN 377
            L +L L NC  L  + +SI  L  + S+ + NCS L   P             ++  CN
Sbjct: 700 GLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCN 759

Query: 378 IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           +       IPS +  L+         S +  +P+++    +L +L +  C+ LE +P+  
Sbjct: 760 LMKGA---IPSDLWCLSSLRFLDVSESPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELP 816

Query: 431 GNLEALEELRVEGTGIREVPKS 452
             LE LE       G    P S
Sbjct: 817 SRLEVLEAPGCPHVGTLSTPSS 838



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 39/317 (12%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           + +PS      +L  L +  C NF++  D  GNL+    +      I+ELP   G L   
Sbjct: 479 KEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNSFGYL--- 535

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
                                +S +++ + +CSNL+ FPEI         ++R+   +L 
Sbjct: 536 ---------------------ESPQNLCLDDCSNLENFPEIHV-------MKRL--EILW 565

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           LN  + ++ LP++    ++L  L +  C   E  P E+ N+ +L  LR+  T I+E+P S
Sbjct: 566 LNN-TAIKELPNAFGCLEALQFLYLSGCSNFEEFP-EIQNMGSLRFLRLNETAIKELPCS 623

Query: 453 LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L L+ C +  SLP+ +   KSL  L I  C N +  P+ + ++++L  L +
Sbjct: 624 IGHLTKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLL 683

Query: 512 KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
             T I E+P S+  L  L  LVL++  NL  +P S+  L+ L SL + N + L  +P+ L
Sbjct: 684 SKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNL 743

Query: 570 DPLS-SLKYLDLFENNL 585
             L   L+ LDL   NL
Sbjct: 744 RSLQCCLRRLDLAGCNL 760


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 164/571 (28%), Positives = 264/571 (46%), Gaps = 64/571 (11%)

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG-QCMFKSLTSL 288
            L S    R  NL+FL+     I G             K+C +   LP G   +   L  L
Sbjct: 540  LNSNAFGRMYNLRFLKFYQSYIHGG-----------FKECTKIR-LPQGLDSLSNELRYL 587

Query: 289  EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
                 P  + LP  + +L  L  L++  + ++ L +G   L  L  ++L     L  I+ 
Sbjct: 588  HWHGYP-LKSLPARI-HLMNLVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRITE 645

Query: 349  SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
             +    ++  +++S C NL+  P         S       S L++N C+KLESLPSS+C 
Sbjct: 646  -LTTASNLSYMKLSGCKNLRSMP---------STTRWKSLSTLEMNYCTKLESLPSSICK 695

Query: 409  FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS 467
             KSL SL +  C  L+  P+ L +++ L+ L + GT I+E+P S+ +L  LS + L+ C 
Sbjct: 696  LKSLESLSLCGCSNLQSFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCR 755

Query: 468  SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
            +   LP      K+L  L +  C    +LP+++ NL  L+ L++    + ++P  +  LS
Sbjct: 756  NLAHLPESFCNLKALYWLFLTFCPKLEKLPEKLSNLTTLEDLSVGVCNLLKLPSHMNHLS 815

Query: 528  SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLD 586
             +  L LS N    +P S   L +L  L +S+   L  +PE    L+ +   D    +L+
Sbjct: 816  CISKLDLSGNYFDQLP-SFKYLLNLRCLDISSCRRLRSLPEVPHSLTDIDAHDC--RSLE 872

Query: 587  RIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG--WM-KQSVNGETYIT 643
             I    + F       F   +  +   +C K+D +  S+ + D   W+ K ++  +   +
Sbjct: 873  TISGLKQIFQLKYTHTFYDKK--IIFTSCFKMDESAWSDFLADAQFWIQKVAMRAKDEES 930

Query: 644  KSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVED 703
             S+++PG++IPKWF +QS GS+I ++    +  + L+GF  CVV+A    E   H S   
Sbjct: 931  FSIWYPGSKIPKWFGYQSEGSSIVIQLHPRSHKHNLLGFTLCVVLAFE-DEFEYHNS--- 986

Query: 704  DRKCNLFDVVC-----DRRSEGYD-----SYTSSYLGKISHVESDHVFL-----GSSIFA 748
                  FDV+C     + R E  D     S  +   GK  +V SDHV L      SS  A
Sbjct: 987  -----FFDVLCVYQLKNYRGEYTDCKEVYSSRTHVSGKNKYVGSDHVILFYDPNFSSTEA 1041

Query: 749  GENSCKRSD-EFFFHIDRSCC----EVKKCG 774
             E S   +  EF++  + SCC     VKKC 
Sbjct: 1042 NELSYNEASFEFYWQNNESCCMQSSMVKKCA 1072



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 178/385 (46%), Gaps = 72/385 (18%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFC-----GSKNKC----MVHSLEGVPFTELRYFEWH 52
           S IN +I++N   F +M  LR LKF      G   +C    +   L+ +   ELRY  WH
Sbjct: 533 SMIN-KIELNSNAFGRMYNLRFLKFYQSYIHGGFKECTKIRLPQGLDSLS-NELRYLHWH 590

Query: 53  QFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            +PLK+L   +H  NLV L +P SKV +LW   ++L  LK IDL YS+ L ++ +L+ A 
Sbjct: 591 GYPLKSLPARIHLMNLVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRITELTTAS 650

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSN 170
           NL  + L  C +L    S+ ++   L  L+++ C  L SLP+SI   K L+ L L GCSN
Sbjct: 651 NLSYMKLSGCKNLRSMPSTTRW-KSLSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSN 709

Query: 171 LKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           L++ P++     R   L L G  I+ELPSSI+                        +L+ 
Sbjct: 710 LQSFPEILESMDRLKVLVLNGTAIKELPSSIE------------------------RLKG 745

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L SI +  C NL  L    CN+            L L  CP+ E LP       +L  L 
Sbjct: 746 LSSIYLENCRNLAHLPESFCNLKALYW-------LFLTFCPKLEKLPEKLSNLTTLEDLS 798

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +  C N  +LP  + +L  +++L + G    +LP                         S
Sbjct: 799 VGVC-NLLKLPSHMNHLSCISKLDLSGNYFDQLP-------------------------S 832

Query: 350 IFKLKSVESIEISNCSNLKGFPEIP 374
              L ++  ++IS+C  L+  PE+P
Sbjct: 833 FKYLLNLRCLDISSCRRLRSLPEVP 857



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 145/316 (45%), Gaps = 49/316 (15%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYS-CKRLENISSSIFKLQFLES------IRIHR---CP 239
           G  ++ LP+ I  ++ +  +L YS  KRL      + KL+ ++       IRI       
Sbjct: 591 GYPLKSLPARIHLMNLVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRITELTTAS 650

Query: 240 NLQFLEMPSC-NIDG--TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
           NL ++++  C N+    + ++ +  S L++  C + ESLPS  C  KSL SL +  C N 
Sbjct: 651 NLSYMKLSGCKNLRSMPSTTRWKSLSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSNL 710

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           +  P+ L ++  L  L+++GTAI+ELP                        SSI +LK +
Sbjct: 711 QSFPEILESMDRLKVLVLNGTAIKELP------------------------SSIERLKGL 746

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
            SI + NC NL   PE  FCN+            L L  C KLE LP  L    +L  L 
Sbjct: 747 SSIYLENCRNLAHLPE-SFCNLKA-------LYWLFLTFCPKLEKLPEKLSNLTTLEDLS 798

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
           +  C  L +LP  + +L  + +L + G    ++P     L L  L +  C    SLP   
Sbjct: 799 VGVCNLL-KLPSHMNHLSCISKLDLSGNYFDQLPSFKYLLNLRCLDISSCRRLRSLPE-- 855

Query: 477 YVSKSLTSLEIIDCKN 492
            V  SLT ++  DC++
Sbjct: 856 -VPHSLTDIDAHDCRS 870


>gi|255561510|ref|XP_002521765.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538978|gb|EEF40575.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1018

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 136/224 (60%), Gaps = 12/224 (5%)

Query: 7   EIQINPYTFSKMTELRLLKF--CGSKNKCMVH-SLEGVPF--TELRYFEWHQFPLKTL-N 60
           ++ ++   F+KM  LR+LKF   GSK    VH   EG+ +  + LR F W  +P K+L +
Sbjct: 541 KMHLSSEAFAKMRNLRMLKFYYTGSKYMNKVHLPDEGLHYMSSNLRLFHWEGYPSKSLPS 600

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             H ENL+ L + GS + QLW  VQ+LV+LKRIDL YS+ LT++PDLS AQNLE ++L  
Sbjct: 601 SFHAENLIELNLVGSNLEQLWTGVQHLVNLKRIDLSYSRHLTRIPDLSKAQNLERMELTT 660

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C +L    SS+Q LNKL  LDL  C +L SLP  I+   LK LVL  CSNL  LP++ S 
Sbjct: 661 CQNLAAVSSSVQCLNKLVFLDLSDCTNLRSLPGGINLNSLKALVLTSCSNLAKLPEI-SG 719

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSN----IGELLIYSCKRLENI 220
            +R  L L G  IEELP  ++CL +    I  L  + C  LE I
Sbjct: 720 DIR-FLCLSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEAI 762



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 167/387 (43%), Gaps = 71/387 (18%)

Query: 434 EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           E L EL + G+ + ++   +  L  L ++ L        +P  L  +++L  +E+  C+N
Sbjct: 605 ENLIELNLVGSNLEQLWTGVQHLVNLKRIDLSYSRHLTRIPD-LSKAQNLERMELTTCQN 663

Query: 493 FMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
              +   +  L  L  L +   T +R +P  +  L+SL+ LVL+  +NL  +PE    + 
Sbjct: 664 LAAVSSSVQCLNKLVFLDLSDCTNLRSLPGGI-NLNSLKALVLTSCSNLAKLPEISGDIR 722

Query: 551 SLVSLKLSNNNLERIPERL----DPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTS 605
            L    LS   +E +P+RL    D    +K L  +   +L+ IP         I S +  
Sbjct: 723 FLC---LSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEAIPR--------IKSLWEP 771

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDG-W---MKQSVNGETYITKS----MYFPGNEIPKWF 657
                D  NC  LD  E S + +D  W   + ++ + + +  K       FPG+E+P+ F
Sbjct: 772 DVEYWDFANCFNLDQKETSNLAEDAQWSFLVMETASKQVHDYKGNPGQFCFPGSEVPESF 831

Query: 658 RHQSTGSTISLKTPQPTGYNKLMGFAFCVVVAC----SVSE---CCRHESVEDDRKCNLF 710
            ++   S+++     P+   +LMG A CVV+      SVS+   CC+             
Sbjct: 832 CNEDIRSSLTFML--PSNGRQLMGIALCVVLGSEEPYSVSKVRCCCK------------- 876

Query: 711 DVVCDRRSEGYDS--YTSSYLGKISH----VESDHVFLGSSIFAGE-----NSCKRSDE- 758
              C  +S   D   +TS Y G I+H    + SDH+ L    +        NS     E 
Sbjct: 877 ---CHFKSTNQDDLIFTSQY-GSINHENVTLNSDHILLWFESWKSRSDKLNNSFTECHEA 932

Query: 759 -FFFHID---RSCCEVKKCGIHFVHAQ 781
            F F I    +    V+K G+H ++A+
Sbjct: 933 SFEFCISYGFKKHINVRKYGVHLIYAE 959



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 45/186 (24%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPE--GLGQLALLSKLELKNCSELEYISSSIFK 352
           N E+L   + +L  L R  ID +  R L     L +   L ++EL  C  L  +SSS+  
Sbjct: 616 NLEQLWTGVQHLVNLKR--IDLSYSRHLTRIPDLSKAQNLERMELTTCQNLAAVSSSVQC 673

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L  +  +++S+C+NL+  P          GI                           SL
Sbjct: 674 LNKLVFLDLSDCTNLRSLP---------GGIN------------------------LNSL 700

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-----ALSKLKLKKCS 467
            +L +  C  L +LP+  G++     L + GT I E+P+ L  L      +  LK   C+
Sbjct: 701 KALVLTSCSNLAKLPEISGDIRF---LCLSGTAIEELPQRLRCLLDVPPCIKILKAWHCT 757

Query: 468 SFESLP 473
           S E++P
Sbjct: 758 SLEAIP 763



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 23/150 (15%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           E L +G     +L  +++    +  R+PD L   Q L R+ +  T  + L      +  L
Sbjct: 618 EQLWTGVQHLVNLKRIDLSYSRHLTRIPD-LSKAQNLERMEL--TTCQNLAAVSSSVQCL 674

Query: 333 SKL---ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIER 385
           +KL   +L +C+ L  +   I  L S++++ +++CSNL   PEI     F  + G+ IE 
Sbjct: 675 NKLVFLDLSDCTNLRSLPGGI-NLNSLKALVLTSCSNLAKLPEISGDIRFLCLSGTAIEE 733

Query: 386 IPS------------SVLKLNKCSKLESLP 403
           +P              +LK   C+ LE++P
Sbjct: 734 LPQRLRCLLDVPPCIKILKAWHCTSLEAIP 763


>gi|296089455|emb|CBI39274.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 177/568 (31%), Positives = 259/568 (45%), Gaps = 98/568 (17%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKN-------KCMVHSLEGVPFTELRYFEWHQFPLKT 58
           EIQ N   FSKM +LRLLK +C   +       K ++      P  +LRY  W +  L +
Sbjct: 51  EIQFNTKVFSKMKKLRLLKIYCNDHDGLTREEYKVLLPKDFQFPH-DLRYLHWQRCTLTS 109

Query: 59  LNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEIL 116
           L    + ++L+ + +  S V QLW          R+ L+      K PD  +   +L  L
Sbjct: 110 LPWNFNGKHLIEINLKSSNVKQLWKG-------NRLYLERCSKFEKFPDTFTYMGHLRGL 162

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCK-----------------------SLTSLPT 153
            L   S + E  SSI YL  LE+LDL  C                        ++  LP 
Sbjct: 163 HLRE-SGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPN 221

Query: 154 SIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLI 211
           SI S   L+ L LR CS  +    + +   R   L L G GI+ELP SI  L ++ EL +
Sbjct: 222 SIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNL 281

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
             C   E         +F E     +C  +  LE        T  KE             
Sbjct: 282 RYCSNFE---------KFPEIQGNMKCLKMLCLE-------DTAIKE------------- 312

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
              LP+G    ++L  L++  C N ER P+   N+  L  L +D TAIR LP  +G L  
Sbjct: 313 ---LPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTR 369

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L+L+NC  L+ + +SI  LKS++ + ++ CSNL+ F EI         +E++    L
Sbjct: 370 LERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEIT------EDMEQLEGLFL 423

Query: 392 KLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREV 449
               C + +  LPSS+   + L SLE+I+C+ L  LP+ +GNL  L  L V     +  +
Sbjct: 424 ----CETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNL 479

Query: 450 PKSL--AQLALSKLKLKKCSSF-ESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEY 505
           P +L   Q  L+ L L  C+   E +PS L+   SL  L I +  N MR +P  I +L  
Sbjct: 480 PDNLRSQQCILTSLDLGGCNLMEEEIPSDLWCLSSLEFLNISE--NHMRCIPTGITHLCK 537

Query: 506 LKVLTIKGTAIREVPESLGQL-SSLEWL 532
           L+ L +    + EV   +G+L SSL W+
Sbjct: 538 LRTLLMNHCPMLEV---IGELPSSLGWI 562



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 223/505 (44%), Gaps = 107/505 (21%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           LPS     +SL  L++  C  FE+ P+  GN++ L  L +D TAI+ELP  +G L  L  
Sbjct: 172 LPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEM 231

Query: 335 LELKNCSELEYIS-----------------------SSIFKLKSVESIEISNCSNLKGFP 371
           L L+ CS+ E  S                        SI  L+S+E + +  CSN + FP
Sbjct: 232 LSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFP 291

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           EI   N+    +  +  + +K         LP+ +   ++L  L++  C  LER P+   
Sbjct: 292 EIQG-NMKCLKMLCLEDTAIK--------ELPNGIGRLQALEILDLSGCSNLERFPEIQK 342

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           N+  L  L ++ T IR +P S+  L  L +L L+ C + +SLP+ +   KSL  L +  C
Sbjct: 343 NMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGC 402

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQL 549
            N     +   ++E L+ L +  T I E+P S+  L  L+ L L +  NL  +P S+  L
Sbjct: 403 SNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNL 462

Query: 550 SSLVSLKLSN--------NNL-------------------ERIPERLDPLSSLKYLDLFE 582
           + L SL + N        +NL                   E IP  L  LSSL++L++ E
Sbjct: 463 TCLTSLHVRNCPKLHNLPDNLRSQQCILTSLDLGGCNLMEEEIPSDLWCLSSLEFLNISE 522

Query: 583 NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD-----GWMKQS-- 635
           N       ++R  PT I +    LR ++ + +C  L      E+I +     GW++    
Sbjct: 523 N-------HMRCIPTGI-THLCKLR-TLLMNHCPML------EVIGELPSSLGWIEAHGC 567

Query: 636 --VNGETYITK-----------------SMYFPGNE-IPKWFRHQSTGSTISLKTPQPTG 675
             +  ET  +                  ++  PG+  IP+W  HQ  G  +S++ P    
Sbjct: 568 PCLETETSSSLLWSSLLKHLKSPIQRRFNIIIPGSSGIPEWVSHQRMGCEVSVELPM-NW 626

Query: 676 Y--NKLMGFA-FCVVVACSVSECCR 697
           Y  N L+GF  F   V     EC R
Sbjct: 627 YEDNNLLGFVLFFHHVPLDDDECVR 651



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 139/287 (48%), Gaps = 40/287 (13%)

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
           K+  E+   SS++ +L     + +  CS  + FP+         G+    S +       
Sbjct: 117 KHLIEINLKSSNVKQLWKGNRLYLERCSKFEKFPDTFTYMGHLRGLHLRESGI------- 169

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL- 456
             + LPSS+   +SL  L++  C K E+ P+  GN++ L  L ++ T I+E+P S+  L 
Sbjct: 170 --KELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLT 227

Query: 457 ALSKLKLKKCSSFE-----------------------SLPSRLYVSKSLTSLEIIDCKNF 493
           +L  L L++CS FE                        LP  +   +SL  L +  C NF
Sbjct: 228 SLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNF 287

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL 552
            + P+  GN++ LK+L ++ TAI+E+P  +G+L +LE L LS  +NL+  PE    + +L
Sbjct: 288 EKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNL 347

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
             L L    +  +P  +  L+ L+ LDL EN  +     L+S P SI
Sbjct: 348 WGLFLDETAIRGLPYSVGHLTRLERLDL-ENCRN-----LKSLPNSI 388


>gi|168032783|ref|XP_001768897.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679809|gb|EDQ66251.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 542

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 234/461 (50%), Gaps = 34/461 (7%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           ++ NL SL  +D++    LT LP +L    +L  L++  C SLT   + +  L  L  L+
Sbjct: 102 ELGNLTSLTTLDMRECSSLTSLPKELGKLTSLTTLNINGCLSLTSLPNKLGNLISLNTLN 161

Query: 142 LDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE------ 194
           ++RCKSL  LP  +        L + GCS L  LP      L + + L+ + +E      
Sbjct: 162 MERCKSLKLLPIELGKLTSFTILNISGCSCLMLLPN----ELGNLISLITLNMEWCKKLT 217

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP+ +  L+++  L +  C+ L ++ + + KL  L ++ +  C +L  L +   N+   
Sbjct: 218 SLPNELGNLTSLTTLNMKWCENLTSLPNEVGKLTSLITLNMQWCSSLTSLPIELGNLISL 277

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
            +       L + +C +  SLP+      SLT+L I  C + E LP ELG L +L  L I
Sbjct: 278 TT-------LTMNRCEKLMSLPNELGNLISLTTLNIEWCLSLESLPKELGKLTSLTTLNI 330

Query: 315 DGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           +    +  LP  LG L  L+ L +  C +L  + + +  L S+ ++ +  C NL+  P+ 
Sbjct: 331 NSCKKLTSLPNELGNLISLTTLSMNRCKKLMSLQNKLDNLISLTTLNMEWCLNLESLPK- 389

Query: 374 PFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
                    ++++ S + L +N C KL SLP+ L    SLT+L++ +C KL  LP+ELGN
Sbjct: 390 --------ELDKLTSLTTLNINSCKKLTSLPNELGNLTSLTTLDMKECSKLTSLPNELGN 441

Query: 433 LEALEELRVEGT--GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           L +L  L +      +  +P  L  L +L+ L + +CS  +SLP+ L    SLT+L++ +
Sbjct: 442 LTSLTTLNMREACRSLTSLPSELGNLTSLTTLYMWECSRLKSLPNELGNLTSLTTLDMRE 501

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSL 529
           C     LP+E+GNL  L  L ++   ++  +P  L  L+SL
Sbjct: 502 CSRLTSLPNELGNLTSLTTLDMRECLSLTSLPNELDNLTSL 542



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 256/522 (49%), Gaps = 40/522 (7%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN-------LEILDLGYCSSLTETHSSIQYL 134
           DD+++++ L R  +     L   P L    N       +   D   CSSLT   + +  L
Sbjct: 23  DDLRSVLELTRQSVNLRCFLLSCPYLISLPNALGNLISIATFDTQRCSSLTSLPNELGNL 82

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP----KMTSCHLRSTLPLL 189
             L  LD+  C SL SLP  + +   L  L +R CS+L +LP    K+TS    +TL + 
Sbjct: 83  TSLTTLDIRECLSLMSLPHELGNLTSLTTLDMRECSSLTSLPKELGKLTS---LTTLNIN 139

Query: 190 G-VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           G + +  LP+ +  L ++  L +  CK L+ +   + KL     + I  C  L  L    
Sbjct: 140 GCLSLTSLPNKLGNLISLNTLNMERCKSLKLLPIELGKLTSFTILNISGCSCLMLLPNEL 199

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
            N+    +       L ++ C +  SLP+      SLT+L +  C N   LP+E+G L +
Sbjct: 200 GNLISLIT-------LNMEWCKKLTSLPNELGNLTSLTTLNMKWCENLTSLPNEVGKLTS 252

Query: 309 LNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           L  L +   +++  LP  LG L  L+ L +  C +L  + + +  L S+ ++ I  C +L
Sbjct: 253 LITLNMQWCSSLTSLPIELGNLISLTTLTMNRCEKLMSLPNELGNLISLTTLNIEWCLSL 312

Query: 368 KGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           +  P+          + ++ S + L +N C KL SLP+ L    SLT+L +  CKKL  L
Sbjct: 313 ESLPK---------ELGKLTSLTTLNINSCKKLTSLPNELGNLISLTTLSMNRCKKLMSL 363

Query: 427 PDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            ++L NL +L  L +E    +  +PK L +L +L+ L +  C    SLP+ L    SLT+
Sbjct: 364 QNKLDNLISLTTLNMEWCLNLESLPKELDKLTSLTTLNINSCKKLTSLPNELGNLTSLTT 423

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGT--AIREVPESLGQLSSLEWLVLSD-NNLQI 541
           L++ +C     LP+E+GNL  L  L ++    ++  +P  LG L+SL  L + + + L+ 
Sbjct: 424 LDMKECSKLTSLPNELGNLTSLTTLNMREACRSLTSLPSELGNLTSLTTLYMWECSRLKS 483

Query: 542 IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           +P  L  L+SL +L +   + L  +P  L  L+SL  LD+ E
Sbjct: 484 LPNELGNLTSLTTLDMRECSRLTSLPNELGNLTSLTTLDMRE 525



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 202/401 (50%), Gaps = 40/401 (9%)

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPE 324
           L  CP   SLP+      S+ + +   C +   LP+ELGNL +L  L I +  ++  LP 
Sbjct: 42  LLSCPYLISLPNALGNLISIATFDTQRCSSLTSLPNELGNLTSLTTLDIRECLSLMSLPH 101

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--PFCNIDGSG 382
            LG L  L+ L+++ CS L  +   + KL S+ ++ I+ C +L   P       +++   
Sbjct: 102 ELGNLTSLTTLDMRECSSLTSLPKELGKLTSLTTLNINGCLSLTSLPNKLGNLISLNTLN 161

Query: 383 IERIPS--------------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           +ER  S              ++L ++ CS L  LP+ L    SL +L +  CKKL  LP+
Sbjct: 162 MERCKSLKLLPIELGKLTSFTILNISGCSCLMLLPNELGNLISLITLNMEWCKKLTSLPN 221

Query: 429 ELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           ELGNL +L  L ++    +  +P  + +L +L  L ++ CSS  SLP  L    SLT+L 
Sbjct: 222 ELGNLTSLTTLNMKWCENLTSLPNEVGKLTSLITLNMQWCSSLTSLPIELGNLISLTTLT 281

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWL-VLSDNNLQIIPE 544
           +  C+  M LP+E+GNL  L  L I+   ++  +P+ LG+L+SL  L + S   L  +P 
Sbjct: 282 MNRCEKLMSLPNELGNLISLTTLNIEWCLSLESLPKELGKLTSLTTLNINSCKKLTSLPN 341

Query: 545 SLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFP------ 596
            L  L SL +L ++    L  +  +LD L SL  L++ +  NL+ +P+ L          
Sbjct: 342 ELGNLISLTTLSMNRCKKLMSLQNKLDNLISLTTLNMEWCLNLESLPKELDKLTSLTTLN 401

Query: 597 -------TSIPSEFTSLR--LSVDLRNCLKLD--PNELSEI 626
                  TS+P+E  +L    ++D++ C KL   PNEL  +
Sbjct: 402 INSCKKLTSLPNELGNLTSLTTLDMKECSKLTSLPNELGNL 442



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 178/384 (46%), Gaps = 73/384 (19%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           L TLN+   ENL SL           ++V  L SL  +++++   LT LP          
Sbjct: 229 LTTLNMKWCENLTSLP----------NEVGKLTSLITLNMQWCSSLTSLP---------- 268

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           ++LG   SLT              L ++RC+ L SLP                + L NL 
Sbjct: 269 IELGNLISLT-------------TLTMNRCEKLMSLP----------------NELGNLI 299

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
            +T+ ++   L L     E LP  +  L+++  L I SCK+L ++ + +  L  L ++ +
Sbjct: 300 SLTTLNIEWCLSL-----ESLPKELGKLTSLTTLNINSCKKLTSLPNELGNLISLTTLSM 354

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
           +RC  L  L+    N+    +       L ++ C   ESLP       SLT+L I  C  
Sbjct: 355 NRCKKLMSLQNKLDNLISLTT-------LNMEWCLNLESLPKELDKLTSLTTLNINSCKK 407

Query: 296 FERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKN-CSELEYISSSIFKL 353
              LP+ELGNL +L  L + + + +  LP  LG L  L+ L ++  C  L  + S +  L
Sbjct: 408 LTSLPNELGNLTSLTTLDMKECSKLTSLPNELGNLTSLTTLNMREACRSLTSLPSELGNL 467

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSL 412
            S+ ++ +  CS LK  P         + +  + S + L + +CS+L SLP+ L    SL
Sbjct: 468 TSLTTLYMWECSRLKSLP---------NELGNLTSLTTLDMRECSRLTSLPNELGNLTSL 518

Query: 413 TSLEIIDCKKLERLPDELGNLEAL 436
           T+L++ +C  L  LP+EL NL +L
Sbjct: 519 TTLDMRECLSLTSLPNELDNLTSL 542



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 158/318 (49%), Gaps = 33/318 (10%)

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  LG L  ++  + + CS L  + + +  L S+ +++I  C +L   P       +  
Sbjct: 51  LPNALGNLISIATFDTQRCSSLTSLPNELGNLTSLTTLDIRECLSLMSLPH------ELG 104

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            +  +  + L + +CS L SLP  L    SLT+L I  C  L  LP++LGNL +L  L +
Sbjct: 105 NLTSL--TTLDMRECSSLTSLPKELGKLTSLTTLNINGCLSLTSLPNKLGNLISLNTLNM 162

Query: 442 EGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           E    ++ +P  L +L + + L +  CS    LP+ L    SL +L +  CK    LP+E
Sbjct: 163 ERCKSLKLLPIELGKLTSFTILNISGCSCLMLLPNELGNLISLITLNMEWCKKLTSLPNE 222

Query: 500 IGNLEYLKVLTIKGTA-IREVPESLGQLSSL-----EWLVLSDNNLQIIPESLNQLSSLV 553
           +GNL  L  L +K    +  +P  +G+L+SL     +W     ++L  +P  L  L SL 
Sbjct: 223 LGNLTSLTTLNMKWCENLTSLPNEVGKLTSLITLNMQWC----SSLTSLPIELGNLISLT 278

Query: 554 SLKLSN-NNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSEFTSLRLSVD 611
           +L ++    L  +P  L  L SL  L++ +  +L+ +P+ L         + TSL  +++
Sbjct: 279 TLTMNRCEKLMSLPNELGNLISLTTLNIEWCLSLESLPKEL--------GKLTSLT-TLN 329

Query: 612 LRNCLKLD--PNELSEII 627
           + +C KL   PNEL  +I
Sbjct: 330 INSCKKLTSLPNELGNLI 347



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 9/168 (5%)

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPE 521
           L  C    SLP+ L    S+ + +   C +   LP+E+GNL  L  L I+   ++  +P 
Sbjct: 42  LLSCPYLISLPNALGNLISIATFDTQRCSSLTSLPNELGNLTSLTTLDIRECLSLMSLPH 101

Query: 522 SLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN-NLERIPERLDPLSSLKYLD 579
            LG L+SL  L + + ++L  +P+ L +L+SL +L ++   +L  +P +L  L SL  L 
Sbjct: 102 ELGNLTSLTTLDMRECSSLTSLPKELGKLTSLTTLNINGCLSLTSLPNKLGNLISLNTL- 160

Query: 580 LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
               N++R  + L+  P  +    +   L++   +CL L PNEL  +I
Sbjct: 161 ----NMERC-KSLKLLPIELGKLTSFTILNISGCSCLMLLPNELGNLI 203


>gi|224127913|ref|XP_002329208.1| predicted protein [Populus trichocarpa]
 gi|222870989|gb|EEF08120.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/372 (35%), Positives = 186/372 (50%), Gaps = 42/372 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NI 61
           EI+++   F++M  LRLLK   S+    C V+   G+     ELRY  W  +PLK+L + 
Sbjct: 72  EIKLSSKAFARMYNLRLLKIYNSEVGKNCKVYHPNGLKSLSDELRYLHWDGYPLKSLPSN 131

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLV----SLKRIDLKYSKLLTKLPDLSLAQNLE--- 114
            H ENLV L +  SKV +LW   Q L     S K I  KY K L    +LS   NL+   
Sbjct: 132 FHPENLVELNLSHSKVRELWKGDQKLHKHFESSKNIKSKYLKAL----NLSGCSNLKMYP 187

Query: 115 -----ILDLGYC-SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL--- 165
                ++ L +  +++ E   SI +L++L  L+L  CK L +LP SI    LK +V+   
Sbjct: 188 ETTEHVMYLNFNETAIKELPQSIGHLSRLVALNLRECKQLGNLPDSIC--LLKSIVIVDV 245

Query: 166 RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
            GCSN+   P +        L L G  +EE PSS+  L  I  L + +C RL+N+ S+I+
Sbjct: 246 SGCSNVTKFPNIPGN--TRYLYLSGTAVEEFPSSVGHLWRISSLDLSNCGRLKNLPSTIY 303

Query: 226 KLQFLESIRIHRCPNLQFLEMPSCNI-----DGTRSKEQPSS--------ELKLKKCPRP 272
           +L +LE + +  C ++      S NI     DGT  +E PSS        EL L+ C + 
Sbjct: 304 ELAYLEKLNLSGCSSVTEFPNVSWNIKELYLDGTAIEEIPSSIACFYKLVELHLRNCTKF 363

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           E LP   C  KSL  L +  C  F+R P  L  +++L  L +D   I  LP  +  L  L
Sbjct: 364 EILPGSICKLKSLQKLNLSGCSQFKRFPGILETMESLRYLYLDRIGITNLPSPIRNLKGL 423

Query: 333 SKLELKNCSELE 344
             LEL NC  LE
Sbjct: 424 CCLELGNCKYLE 435



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 153/307 (49%), Gaps = 23/307 (7%)

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           K L +L +  C N +  P+   ++  LN    + TAI+ELP+ +G L+ L  L L+ C +
Sbjct: 170 KYLKALNLSGCSNLKMYPETTEHVMYLN---FNETAIKELPQSIGHLSRLVALNLRECKQ 226

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSV-------- 390
           L  +  SI  LKS+  +++S CSN+  FP IP    +  + G+ +E  PSSV        
Sbjct: 227 LGNLPDSICLLKSIVIVDVSGCSNVTKFPNIPGNTRYLYLSGTAVEEFPSSVGHLWRISS 286

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L+ C +L++LPS++     L  L +  C  +   P+   N++   EL ++GT I E+P
Sbjct: 287 LDLSNCGRLKNLPSTIYELAYLEKLNLSGCSSVTEFPNVSWNIK---ELYLDGTAIEEIP 343

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+A    L +L L+ C+ FE LP  +   KSL  L +  C  F R P  +  +E L+ L
Sbjct: 344 SSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNLSGCSQFKRFPGILETMESLRYL 403

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +    I  +P  +  L  L  L L   N + +      L  L  L LS   +  +P+ L
Sbjct: 404 YLDRIGITNLPSPIRNLKGLCCLELG--NCKYLEGK--YLGDLRLLNLSGCGILEVPKSL 459

Query: 570 DPLSSLK 576
             L+S++
Sbjct: 460 GCLTSIR 466



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 34/297 (11%)

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV--------LKLN 394
           SS   K K ++++ +S CSNLK +PE    + + N + + I+ +P S+        L L 
Sbjct: 163 SSKNIKSKYLKALNLSGCSNLKMYPETTEHVMYLNFNETAIKELPQSIGHLSRLVALNLR 222

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
           +C +L +LP S+C+ KS+  +++  C  + + P+  GN      L + GT + E P S+ 
Sbjct: 223 ECKQLGNLPDSICLLKSIVIVDVSGCSNVTKFPNIPGNTRY---LYLSGTAVEEFPSSVG 279

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L  +S L L  C   ++LPS +Y    L  L +  C +    P+   N   +K L + G
Sbjct: 280 HLWRISSLDLSNCGRLKNLPSTIYELAYLEKLNLSGCSSVTEFPNVSWN---IKELYLDG 336

Query: 514 TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDP 571
           TAI E+P S+     L  L L +    +I+P S+ +L SL  L LS  +  +R P  L+ 
Sbjct: 337 TAIEEIPSSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNLSGCSQFKRFPGILET 396

Query: 572 LSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR--LSVDLRNCLKLDPNELSEI 626
           + SL+YL      LDRI        T++PS   +L+    ++L NC  L+   L ++
Sbjct: 397 MESLRYL-----YLDRIG------ITNLPSPIRNLKGLCCLELGNCKYLEGKYLGDL 442



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 90/215 (41%), Gaps = 38/215 (17%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           LDL  C  L    S+I  L  LE L+L  C S+T  P    S  +K L L          
Sbjct: 287 LDLSNCGRLKNLPSTIYELAYLEKLNLSGCSSVTEFPNV--SWNIKELYLD--------- 335

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                         G  IEE+PSSI C   + EL + +C + E +  SI KL+ L+ + +
Sbjct: 336 --------------GTAIEEIPSSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNL 381

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
             C   QF   P     G     +    L L +     +LPS     K L  LE+ +C  
Sbjct: 382 SGCS--QFKRFP-----GILETMESLRYLYLDRIG-ITNLPSPIRNLKGLCCLELGNCKY 433

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E     LG+L+ LN   + G  I E+P+ LG L 
Sbjct: 434 LE--GKYLGDLRLLN---LSGCGILEVPKSLGCLT 463


>gi|15237452|ref|NP_199463.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177588|dbj|BAB10819.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008010|gb|AED95393.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1353

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 36/386 (9%)

Query: 51  WHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
           W +FPLK +      NLV L+M  SK+ +LW+   +   LK +D+  SK L ++PDLS A
Sbjct: 592 WDRFPLKCMPYTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKA 651

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            N+E LD G+C SL E  SSI+ LNKL  L+++ C  L +LPT  + K L  L    C  
Sbjct: 652 TNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWK 711

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L+  P+  +    S L L    IEE PS++    N+ EL +      EN      K Q +
Sbjct: 712 LRTFPEFATN--ISNLILAETSIEEYPSNLY-FKNVRELSMGKADSDEN------KCQGV 762

Query: 231 ESIRIHRCPNLQFLEMPSC-NIDGTRSKEQPSSELK---LKKCPRPESLPSGQCMFKSLT 286
           +       P L  LE+ +  N+    S  Q  + L+   +  C   ESLP+G    +SL 
Sbjct: 763 KPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTG-INLESLV 821

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           SL +  C   +R PD   N++ L+   +D T I E+P  +     L+KL +K C EL+ +
Sbjct: 822 SLNLFGCSRLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCV 878

Query: 347 SSSIFKLKSVESIEISNCS-----NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           S +IFKLK +  +  SNC      +L  +P         SG+E + +    +       S
Sbjct: 879 SLNIFKLKHLGEVSFSNCGALTRVDLSCYP---------SGVEMMKADNADIVSEETTSS 929

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLP 427
           LP S  +     ++  +DC  L+R P
Sbjct: 930 LPDSCVL-----NVNFMDCVNLDREP 950



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 190/449 (42%), Gaps = 83/449 (18%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G   F  L  L++      + +PD  +  N++ L+       ++ ELP  +  L 
Sbjct: 619  EKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLD--FGHCWSLVELPSSIRNLN 676

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG-----SGIER 385
             L +L ++ C ELE + +  F LKS++ +  + C  L+ FPE    NI       + IE 
Sbjct: 677  KLLELNMEYCGELETLPTG-FNLKSLDYLNFNECWKLRTFPEFA-TNISNLILAETSIEE 734

Query: 386  IPSSVL--------------KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
             PS++                 NKC  ++  P    +  +LT LE+ +   L  L     
Sbjct: 735  YPSNLYFKNVRELSMGKADSDENKCQGVK--PFMPMLSPTLTLLELWNIPNLVELSSSFQ 792

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            NL  LE                      +L +  C + ESLP+ + + +SL SL +  C 
Sbjct: 793  NLNNLE----------------------RLDICYCRNLESLPTGINL-ESLVSLNLFGCS 829

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
               R PD   N++YL    +  T I EVP  +    +L  L +     L+ +  ++ +L 
Sbjct: 830  RLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLK 886

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             L  +  SN   L R+     P S ++ +    +N D + E   S   S+P    S  L+
Sbjct: 887  HLGEVSFSNCGALTRVDLSCYP-SGVEMMK--ADNADIVSEETTS---SLPD---SCVLN 937

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-----GS 664
            V+  +C+ LD   +            ++ ++ I  SM  PG E+P +F ++++     G+
Sbjct: 938  VNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYFTYRTSDSQPFGT 985

Query: 665  TISLKTP-QPTGYNK-LMGFAFCVVVACS 691
            + SL  P  PT  ++    F  C VV+ S
Sbjct: 986  SSSLPIPLLPTQLSQPFFRFRVCAVVSAS 1014



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 41/249 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           EL ++ C   E+LP+G  + KSL  L   +C      P+   N+   + LI+  T+I E 
Sbjct: 680 ELNMEYCGELETLPTGFNL-KSLDYLNFNECWKLRTFPEFATNI---SNLILAETSIEEY 735

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF-----PEIPFCN 377
           P         S L  KN  EL     S+ K  S E+     C  +K F     P +    
Sbjct: 736 P---------SNLYFKNVREL-----SMGKADSDEN----KCQGVKPFMPMLSPTLTLLE 777

Query: 378 I-DGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           + +   +  + SS   LN         C  LESLP+ + + +SL SL +  C +L+R PD
Sbjct: 778 LWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINL-ESLVSLNLFGCSRLKRFPD 836

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
              N++ L+   ++ TGI EVP  +     L+KL +K C   + +   ++  K L  +  
Sbjct: 837 ISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSF 893

Query: 488 IDCKNFMRL 496
            +C    R+
Sbjct: 894 SNCGALTRV 902


>gi|145358924|ref|NP_199464.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008011|gb|AED95394.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1168

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 36/386 (9%)

Query: 51  WHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
           W +FPLK +      NLV L+M  SK+ +LW+   +   LK +D+  SK L ++PDLS A
Sbjct: 593 WDRFPLKCMPYTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKA 652

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            N+E LD G+C SL E  SSI+ LNKL  L+++ C  L +LPT  + K L  L    C  
Sbjct: 653 TNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWK 712

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L+  P+  +    S L L    IEE PS++    N+ EL +      EN      K Q +
Sbjct: 713 LRTFPEFATN--ISNLILAETSIEEYPSNL-YFKNVRELSMGKADSDEN------KCQGV 763

Query: 231 ESIRIHRCPNLQFLEMPSC-NIDGTRSKEQPSSELK---LKKCPRPESLPSGQCMFKSLT 286
           +       P L  LE+ +  N+    S  Q  + L+   +  C   ESLP+G    +SL 
Sbjct: 764 KPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTG-INLESLV 822

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           SL +  C   +R PD   N++ L+   +D T I E+P  +     L+KL +K C EL+ +
Sbjct: 823 SLNLFGCSRLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCV 879

Query: 347 SSSIFKLKSVESIEISNCS-----NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           S +IFKLK +  +  SNC      +L  +P         SG+E + +    +       S
Sbjct: 880 SLNIFKLKHLGEVSFSNCGALTRVDLSCYP---------SGVEMMKADNADIVSEETTSS 930

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLP 427
           LP S  +     ++  +DC  L+R P
Sbjct: 931 LPDSCVL-----NVNFMDCVNLDREP 951



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 190/449 (42%), Gaps = 83/449 (18%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G   F  L  L++      + +PD  +  N++ L+       ++ ELP  +  L 
Sbjct: 620  EKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLD--FGHCWSLVELPSSIRNLN 677

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG-----SGIER 385
             L +L ++ C ELE + +  F LKS++ +  + C  L+ FPE    NI       + IE 
Sbjct: 678  KLLELNMEYCGELETLPTG-FNLKSLDYLNFNECWKLRTFPEFA-TNISNLILAETSIEE 735

Query: 386  IPSSVL--------------KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
             PS++                 NKC  ++  P    +  +LT LE+ +   L  L     
Sbjct: 736  YPSNLYFKNVRELSMGKADSDENKCQGVK--PFMPMLSPTLTLLELWNIPNLVELSSSFQ 793

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            NL  LE                      +L +  C + ESLP+ + + +SL SL +  C 
Sbjct: 794  NLNNLE----------------------RLDICYCRNLESLPTGINL-ESLVSLNLFGCS 830

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
               R PD   N++YL    +  T I EVP  +    +L  L +     L+ +  ++ +L 
Sbjct: 831  RLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLK 887

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             L  +  SN   L R+     P S ++ +    +N D + E   S   S+P    S  L+
Sbjct: 888  HLGEVSFSNCGALTRVDLSCYP-SGVEMMK--ADNADIVSEETTS---SLPD---SCVLN 938

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-----GS 664
            V+  +C+ LD   +            ++ ++ I  SM  PG E+P +F ++++     G+
Sbjct: 939  VNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYFTYRTSDSQPFGT 986

Query: 665  TISLKTP-QPTGYNK-LMGFAFCVVVACS 691
            + SL  P  PT  ++    F  C VV+ S
Sbjct: 987  SSSLPIPLLPTQLSQPFFRFRVCAVVSAS 1015



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 41/249 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           EL ++ C   E+LP+G  + KSL  L   +C      P+   N+   + LI+  T+I E 
Sbjct: 681 ELNMEYCGELETLPTGFNL-KSLDYLNFNECWKLRTFPEFATNI---SNLILAETSIEEY 736

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF-----PEIPFCN 377
           P         S L  KN  EL     S+ K  S E+     C  +K F     P +    
Sbjct: 737 P---------SNLYFKNVREL-----SMGKADSDEN----KCQGVKPFMPMLSPTLTLLE 778

Query: 378 I-DGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           + +   +  + SS   LN         C  LESLP+ + + +SL SL +  C +L+R PD
Sbjct: 779 LWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINL-ESLVSLNLFGCSRLKRFPD 837

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
              N++ L+   ++ TGI EVP  +     L+KL +K C   + +   ++  K L  +  
Sbjct: 838 ISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSF 894

Query: 488 IDCKNFMRL 496
            +C    R+
Sbjct: 895 SNCGALTRV 903


>gi|110741877|dbj|BAE98880.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 1168

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 36/386 (9%)

Query: 51  WHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
           W +FPLK +      NLV L+M  SK+ +LW+   +   LK +D+  SK L ++PDLS A
Sbjct: 593 WDRFPLKCMPYTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKA 652

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            N+E LD G+C SL E  SSI+ LNKL  L+++ C  L +LPT  + K L  L    C  
Sbjct: 653 TNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWK 712

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L+  P+  +    S L L    IEE PS++    N+ EL +      EN      K Q +
Sbjct: 713 LRTFPEFATN--ISNLILAETSIEEYPSNL-YFKNVRELSMGKADSDEN------KCQGV 763

Query: 231 ESIRIHRCPNLQFLEMPSC-NIDGTRSKEQPSSELK---LKKCPRPESLPSGQCMFKSLT 286
           +       P L  LE+ +  N+    S  Q  + L+   +  C   ESLP+G    +SL 
Sbjct: 764 KPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTG-INLESLV 822

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           SL +  C   +R PD   N++ L+   +D T I E+P  +     L+KL +K C EL+ +
Sbjct: 823 SLNLFGCSRLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCV 879

Query: 347 SSSIFKLKSVESIEISNCS-----NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           S +IFKLK +  +  SNC      +L  +P         SG+E + +    +       S
Sbjct: 880 SLNIFKLKHLGEVSFSNCGALTRVDLSCYP---------SGVEMMKADNADIVSEETTSS 930

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLP 427
           LP S  +     ++  +DC  L+R P
Sbjct: 931 LPDSCVL-----NVNFMDCVNLDREP 951



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 190/449 (42%), Gaps = 83/449 (18%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G   F  L  L++      + +PD  +  N++ L+       ++ ELP  +  L 
Sbjct: 620  EKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLD--FGHCWSLVELPSSIRNLN 677

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG-----SGIER 385
             L +L ++ C ELE + +  F LKS++ +  + C  L+ FPE    NI       + IE 
Sbjct: 678  KLLELNMEYCGELETLPTG-FNLKSLDYLNFNECWKLRTFPEFA-TNISNLILAETSIEE 735

Query: 386  IPSSVL--------------KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
             PS++                 NKC  ++  P    +  +LT LE+ +   L  L     
Sbjct: 736  YPSNLYFKNVRELSMGKADSDENKCQGVK--PFMPMLSPTLTLLELWNIPNLVELSSSFQ 793

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            NL  LE                      +L +  C + ESLP+ + + +SL SL +  C 
Sbjct: 794  NLNNLE----------------------RLDICYCRNLESLPTGINL-ESLVSLNLFGCS 830

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
               R PD   N++YL    +  T I EVP  +    +L  L +     L+ +  ++ +L 
Sbjct: 831  RLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLK 887

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             L  +  SN   L R+     P S ++ +    +N D + E   S   S+P    S  L+
Sbjct: 888  HLGEVSFSNCGALTRVDLSCYP-SGVEMMK--ADNADIVSEETTS---SLPD---SCVLN 938

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-----GS 664
            V+  +C+ LD   +            ++ ++ I  SM  PG E+P +F ++++     G+
Sbjct: 939  VNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYFTYRTSDSQPFGT 986

Query: 665  TISLKTP-QPTGYNK-LMGFAFCVVVACS 691
            + SL  P  PT  ++    F  C VV+ S
Sbjct: 987  SSSLPIPLLPTQLSQPFFRFRVCAVVSAS 1015



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 41/249 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           EL ++ C   E+LP+G  + KSL  L   +C      P+   N+   + LI+  T+I E 
Sbjct: 681 ELNMEYCGELETLPTGFNL-KSLDYLNFNECWKLRTFPEFATNI---SNLILAETSIEEY 736

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF-----PEIPFCN 377
           P         S L  KN  EL     S+ K  S E+     C  +K F     P +    
Sbjct: 737 P---------SNLYFKNVREL-----SMGKADSDEN----KCQGVKPFMPMLSPTLTLLE 778

Query: 378 I-DGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           + +   +  + SS   LN         C  LESLP+ + + +SL SL +  C +L+R PD
Sbjct: 779 LWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINL-ESLVSLNLFGCSRLKRFPD 837

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
              N++ L+   ++ TGI EVP  +     L+KL +K C   + +   ++  K L  +  
Sbjct: 838 ISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSF 894

Query: 488 IDCKNFMRL 496
            +C    R+
Sbjct: 895 SNCGALTRV 903


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 194/712 (27%), Positives = 312/712 (43%), Gaps = 133/712 (18%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
            +SEI I    F  M +LRLL+     +  +  +L+ +P  EL++ +W   PL+ L  + L
Sbjct: 587  SSEITIRVEPFVPMIKLRLLQI---NHVNLEGNLKLLP-PELKWIQWKGCPLENLPPDFL 642

Query: 63   HWENLVSLKMPGSKVTQLWD----DVQNLVS--------LKRIDLKYSKLLTKLPDLSLA 110
              + L  L +  S++ ++       V +L+S        LK I+L+    L  +PDLS  
Sbjct: 643  AGQ-LAVLDLSESRIRRVQSLRSKGVGSLISTNGQVDENLKVINLRGCHSLEAIPDLSNH 701

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS 169
            + LE L    C+ L +   S+  L KL  LDL RC  L+     +   K L++L L GCS
Sbjct: 702  KALEKLVFERCNLLVKVPRSVGNLRKLLQLDLRRCSKLSEFLEDVSELKCLEKLFLSGCS 761

Query: 170  NLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
            NL  LP+ + S      L L G  I  LP SI CL  + +L +  C+ ++ + + + KL 
Sbjct: 762  NLSVLPENIGSMPCLKELLLDGTAISNLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLT 821

Query: 229  FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
             LE +                 +D T                  ++LP      K+L  L
Sbjct: 822  SLEELY----------------LDDTAL----------------QNLPDSIGNLKNLQKL 849

Query: 289  EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
              + C +  ++PD +  L++L  L ++G+A+ ELP   G L  LS L    C  L+++ S
Sbjct: 850  HFMHCASLSKIPDTINELKSLKELFLNGSAVEELPLNPGSLPDLSDLSAGGCKFLKHVPS 909

Query: 349  SIFKLKS-----------------------VESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            SI  L                         +  +E+ NC +LKG PE          +++
Sbjct: 910  SIGGLNYLLQLQLDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPE------SIKDMDQ 963

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
            + S  L   + S +E+LP      + L  L + +CKKL  LP+  G+L++L  L ++ T 
Sbjct: 964  LHSLYL---EGSNIENLPEDFGKLEKLVLLRMNNCKKLRGLPESFGDLKSLHRLFMQETS 1020

Query: 446  IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
            + ++P+S   L+ L  LK+ K   F S  S              +  +F+ LP+   NL 
Sbjct: 1021 VTKLPESFGNLSNLRVLKMLKKPFFRSSES--------------EEPHFVELPNSFSNLS 1066

Query: 505  YLKVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN---- 559
             L+ L  +  AI  ++P+ L +L+S++ L L +N    +P SL  LS+L  L L +    
Sbjct: 1067 SLEELDARSWAISGKIPDDLEKLTSMKILNLGNNYFHSLPSSLKGLSNLKKLSLYDCREL 1126

Query: 560  NNLERIPERLD--------------PLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
              L  +P RL+               LS+LK+LD  E NL    + +        +    
Sbjct: 1127 KCLPPLPWRLEQLILANCFSLESISDLSNLKFLD--ELNLTNCEKVVDILGLEHLTALKR 1184

Query: 606  LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWF 657
            L +S     C        S  +K    K S+     +  ++  PGN IP WF
Sbjct: 1185 LYMSGCNSTC--------SLAVKRRLSKASLK----LLWNLSLPGNRIPDWF 1224


>gi|10177589|dbj|BAB10820.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1298

 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 36/386 (9%)

Query: 51  WHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
           W +FPLK +      NLV L+M  SK+ +LW+   +   LK +D+  SK L ++PDLS A
Sbjct: 631 WDRFPLKCMPYTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPDLSKA 690

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            N+E LD G+C SL E  SSI+ LNKL  L+++ C  L +LPT  + K L  L    C  
Sbjct: 691 TNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGFNLKSLDYLNFNECWK 750

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L+  P+  +    S L L    IEE PS++    N+ EL +      EN      K Q +
Sbjct: 751 LRTFPEFATN--ISNLILAETSIEEYPSNL-YFKNVRELSMGKADSDEN------KCQGV 801

Query: 231 ESIRIHRCPNLQFLEMPSC-NIDGTRSKEQPSSELK---LKKCPRPESLPSGQCMFKSLT 286
           +       P L  LE+ +  N+    S  Q  + L+   +  C   ESLP+G    +SL 
Sbjct: 802 KPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTG-INLESLV 860

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           SL +  C   +R PD   N++ L+   +D T I E+P  +     L+KL +K C EL+ +
Sbjct: 861 SLNLFGCSRLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCV 917

Query: 347 SSSIFKLKSVESIEISNCS-----NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           S +IFKLK +  +  SNC      +L  +P         SG+E + +    +       S
Sbjct: 918 SLNIFKLKHLGEVSFSNCGALTRVDLSCYP---------SGVEMMKADNADIVSEETTSS 968

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLP 427
           LP S  +     ++  +DC  L+R P
Sbjct: 969 LPDSCVL-----NVNFMDCVNLDREP 989



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 190/449 (42%), Gaps = 83/449 (18%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G   F  L  L++      + +PD  +  N++ L+       ++ ELP  +  L 
Sbjct: 658  EKLWEGAMSFTCLKELDMWASKYLKEIPDLSKATNIEKLD--FGHCWSLVELPSSIRNLN 715

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG-----SGIER 385
             L +L ++ C ELE + +  F LKS++ +  + C  L+ FPE    NI       + IE 
Sbjct: 716  KLLELNMEYCGELETLPTG-FNLKSLDYLNFNECWKLRTFPEFA-TNISNLILAETSIEE 773

Query: 386  IPSSVL--------------KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
             PS++                 NKC  ++  P    +  +LT LE+ +   L  L     
Sbjct: 774  YPSNLYFKNVRELSMGKADSDENKCQGVK--PFMPMLSPTLTLLELWNIPNLVELSSSFQ 831

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            NL  LE                      +L +  C + ESLP+ + + +SL SL +  C 
Sbjct: 832  NLNNLE----------------------RLDICYCRNLESLPTGINL-ESLVSLNLFGCS 868

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
               R PD   N++YL    +  T I EVP  +    +L  L +     L+ +  ++ +L 
Sbjct: 869  RLKRFPDISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLK 925

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             L  +  SN   L R+     P S ++ +    +N D + E   S   S+P    S  L+
Sbjct: 926  HLGEVSFSNCGALTRVDLSCYP-SGVEMMK--ADNADIVSEETTS---SLPD---SCVLN 976

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-----GS 664
            V+  +C+ LD   +            ++ ++ I  SM  PG E+P +F ++++     G+
Sbjct: 977  VNFMDCVNLDREPV------------LHQQSIIFNSMILPGEEVPSYFTYRTSDSQPFGT 1024

Query: 665  TISLKTP-QPTGYNK-LMGFAFCVVVACS 691
            + SL  P  PT  ++    F  C VV+ S
Sbjct: 1025 SSSLPIPLLPTQLSQPFFRFRVCAVVSAS 1053



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 41/249 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           EL ++ C   E+LP+G  + KSL  L   +C      P+   N+   + LI+  T+I E 
Sbjct: 719 ELNMEYCGELETLPTGFNL-KSLDYLNFNECWKLRTFPEFATNI---SNLILAETSIEEY 774

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF-----PEIPFCN 377
           P         S L  KN  EL     S+ K  S E+     C  +K F     P +    
Sbjct: 775 P---------SNLYFKNVREL-----SMGKADSDEN----KCQGVKPFMPMLSPTLTLLE 816

Query: 378 I-DGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           + +   +  + SS   LN         C  LESLP+ + + +SL SL +  C +L+R PD
Sbjct: 817 LWNIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINL-ESLVSLNLFGCSRLKRFPD 875

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
              N++ L+   ++ TGI EVP  +     L+KL +K C   + +   ++  K L  +  
Sbjct: 876 ISTNIKYLD---LDQTGIEEVPWQIENFFNLTKLTMKGCRELKCVSLNIFKLKHLGEVSF 932

Query: 488 IDCKNFMRL 496
            +C    R+
Sbjct: 933 SNCGALTRV 941


>gi|294461743|gb|ADE76430.1| unknown [Picea sitchensis]
          Length = 524

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 247/492 (50%), Gaps = 33/492 (6%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           + +L + + NL +L+ + L + + L +LP+ L    NL+ + L  C SL     S+  L 
Sbjct: 9   LERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERLPESLSNLT 68

Query: 136 KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVG 192
            L+ + L +C SL  LP S+ +   L+ +VL  C +L+ LP+      +L+S +      
Sbjct: 69  NLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGS 128

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--N 250
           +E LP S+  L+N+  + +   K LE +  S+  L  L+S+ +H C +L+ L  P C  N
Sbjct: 129 LERLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLHSCESLERL--PECLGN 186

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +   +S       +KL  C   E +P       +L S+ +  C N ERLP+ LGNL  L 
Sbjct: 187 LTNLQS-------MKLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESLGNLMNLQ 239

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
            + +       LPE LG L  L  + L  C  LE +  S+  L +++S+ +  C +L+  
Sbjct: 240 SMKLKS---ERLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQSMMLHWCESLERL 296

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           PE          +  + S VL  ++CSKLESLP SL    +L S+ + +C  LERLP+ L
Sbjct: 297 PE------SLGNLMNLQSMVL--HECSKLESLPESLGNLTNLQSMVLHECDHLERLPESL 348

Query: 431 GNLEALEELR-VEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           GNL  L+ +  +    +  +PKSL  L  L  ++L    S + LP  L    +L S++++
Sbjct: 349 GNLTNLQSMELIYCKRLARLPKSLGNLTNLQSMQLLGLKSLKRLPKSLGNLMNLRSMQLL 408

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLN 547
             ++  RLP  +GNL  L+ + +      E   S+  L SLE L VL    L+ IP+   
Sbjct: 409 GLESLERLPKSLGNLTNLQSMELSFLESLERLPSIKTLLSLEELRVLDCVKLKSIPD--- 465

Query: 548 QLSSLVSLKLSN 559
            L+ L  L+L N
Sbjct: 466 -LAQLTKLRLLN 476



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 222/409 (54%), Gaps = 24/409 (5%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +E LP S+  L+N+  + +  C+ LE +  S+  L  L+S+++  C +L+ L     N+ 
Sbjct: 9   LERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERLPESLSNLT 68

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             +S       + L KC   E LP       +L S+ +  C + ERLP+ LGNL  L  +
Sbjct: 69  NLQS-------MVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSM 121

Query: 313 IIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           ++    ++  LPE LG L  L  ++L     LE +  S+  L +++S+ + +C +L+  P
Sbjct: 122 VLHKCGSLERLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLHSCESLERLP 181

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           E   C  + + ++ +     KL+ C  LE +P SL    +L S+ +  C  LERLP+ LG
Sbjct: 182 E---CLGNLTNLQSM-----KLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESLG 233

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           NL  L+ ++++      +P+SL  L  L  + L +C   E LP  L    +L S+ +  C
Sbjct: 234 NLMNLQSMKLKS---ERLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQSMMLHWC 290

Query: 491 KNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQ 548
           ++  RLP+ +GNL  L+ + + + + +  +PESLG L++L+ +VL + ++L+ +PESL  
Sbjct: 291 ESLERLPESLGNLMNLQSMVLHECSKLESLPESLGNLTNLQSMVLHECDHLERLPESLGN 350

Query: 549 LSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
           L++L S++L     L R+P+ L  L++L+ + L    +L R+P+ L + 
Sbjct: 351 LTNLQSMELIYCKRLARLPKSLGNLTNLQSMQLLGLKSLKRLPKSLGNL 399



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/338 (33%), Positives = 179/338 (52%), Gaps = 17/338 (5%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           ++L  C   E LP       +L S+++  C + ERLP+ LGNL  L  + +D   ++  L
Sbjct: 1   MELNHCRSLERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERL 60

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           PE L  L  L  + L  C  LE +  S+  L +++S+ +  C +L+  PE          
Sbjct: 61  PESLSNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPE------SLGN 114

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           +  + S V  L+KC  LE LP SL    +L S+++   K LERLP+ LGNL  L+ + + 
Sbjct: 115 LTNLQSMV--LHKCGSLERLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLH 172

Query: 443 G-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
               +  +P+ L  L  L  +KL  C S E +P  L    +L S+ +  C N  RLP+ +
Sbjct: 173 SCESLERLPECLGNLTNLQSMKLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESL 232

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLS- 558
           GNL  L+ + +K      +PESLG L++L+ +VL +   L+ +PESL  L +L S+ L  
Sbjct: 233 GNLMNLQSMKLKS---ERLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQSMMLHW 289

Query: 559 NNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
             +LER+PE L  L +L+ + L E + L+ +PE L + 
Sbjct: 290 CESLERLPESLGNLMNLQSMVLHECSKLESLPESLGNL 327



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 13/293 (4%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           NL++L+    K  +L + + NL +L+ + L     L +LP+ L    NL+ + L +C SL
Sbjct: 234 NLMNLQSMKLKSERLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQSMMLHWCESL 293

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS--CH 181
                S+  L  L+ + L  C  L SLP S+ +   L+ +VL  C +L+ LP+      +
Sbjct: 294 ERLPESLGNLMNLQSMVLHECSKLESLPESLGNLTNLQSMVLHECDHLERLPESLGNLTN 353

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           L+S   +    +  LP S+  L+N+  + +   K L+ +  S+  L  L S+++    +L
Sbjct: 354 LQSMELIYCKRLARLPKSLGNLTNLQSMQLLGLKSLKRLPKSLGNLMNLRSMQLLGLESL 413

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           + L     N+   +S E       L      E LPS + +  SL  L ++DC   + +PD
Sbjct: 414 ERLPKSLGNLTNLQSME-------LSFLESLERLPSIKTLL-SLEELRVLDCVKLKSIPD 465

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            L  L  L  L ++G    E  +G+     L +L    C  L++   ++ KL+
Sbjct: 466 -LAQLTKLRLLNVEGCHTLEELDGVEHCKSLVELNTIECPNLKWGDGAVNKLR 517



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 37/248 (14%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLG 119
           +LHW            + +L + + NL++L+ + L     L  LP+ L    NL+ + L 
Sbjct: 286 MLHW---------CESLERLPESLGNLMNLQSMVLHECSKLESLPESLGNLTNLQSMVLH 336

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
            C  L     S+  L  L+ ++L  CK L  LP S+ +   L+ + L G  +LK LPK  
Sbjct: 337 ECDHLERLPESLGNLTNLQSMELIYCKRLARLPKSLGNLTNLQSMQLLGLKSLKRLPKSL 396

Query: 179 S--CHLRSTLPLLGV-GIEELPSSIKCLSNIGEL---LIYSCKRLENISS--SIFKLQFL 230
               +LRS + LLG+  +E LP S+  L+N+  +    + S +RL +I +  S+ +L+ L
Sbjct: 397 GNLMNLRS-MQLLGLESLERLPKSLGNLTNLQSMELSFLESLERLPSIKTLLSLEELRVL 455

Query: 231 ESIRIHRCPNL-QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           + +++   P+L Q  ++   N++G  + E+      ++ C             KSL  L 
Sbjct: 456 DCVKLKSIPDLAQLTKLRLLNVEGCHTLEELDG---VEHC-------------KSLVELN 499

Query: 290 IIDCPNFE 297
            I+CPN +
Sbjct: 500 TIECPNLK 507


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 215/791 (27%), Positives = 328/791 (41%), Gaps = 167/791 (21%)

Query: 26   FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDV 84
            F    NK  +      P  ELRY  WH +PL++L    + E+LV L M  S + +LW+  
Sbjct: 781  FTREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPXXFYAEDLVELDMCYSSLKRLWEGD 840

Query: 85   QNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
              L  L  I +  S+ L ++PD+++ A NL+ L L  CSSL E H SI  LNKL +L+L 
Sbjct: 841  LLLEKLNTIRVSCSQHLIEIPDITVSAPNLQKLILDGCSSLLEVHPSIGKLNKLILLNLK 900

Query: 144  RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
             CK L   P+ I  K L+ L   GCS LK  P +                         +
Sbjct: 901  NCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGN----------------------M 938

Query: 204  SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
             N+ EL + S   +E + SSI  L  L  + +  C NL+                     
Sbjct: 939  ENLFELYLASTA-IEELPSSIGHLTGLVLLDLKWCKNLK--------------------- 976

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
                      SLP+  C  KSL +L +  C      P+   N+  L  L++DGT I  LP
Sbjct: 977  ----------SLPTSICKLKSLENLSLSGCSKLGSFPEVTENMDKLKELLLDGTPIEVLP 1026

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFC 376
              + +L  L  L L+ C  L  +S+ +  L S+E++ +S CS L   P        +   
Sbjct: 1027 SSIDRLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLVVSGCSQLNNLPRNLGSLQRLAQL 1086

Query: 377  NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
            + DG+ I + P S++                + ++L  L    CK L   P  LG+L + 
Sbjct: 1087 HADGTAIAQPPDSIV----------------LLRNLQVLIYPGCKILA--PTSLGSLFSF 1128

Query: 437  EELR---VEGTGIREVPKSLAQLALSKLKLKKCSSFE-SLPSRLYVSKSLTSLEIIDC-- 490
              L      G G+R      +  +LS L L  C   E ++P+ +    SL SL+ +D   
Sbjct: 1129 WLLHGNSSNGIGLRLPSSFSSFRSLSNLDLSDCKLIEGAIPNGIC---SLISLKKLDLSQ 1185

Query: 491  KNFMRLP---DEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
             NF+ +P    E+ NLE L++   +  T I E+P SL  +        + N   ++P S 
Sbjct: 1186 NNFLSIPAGISELTNLEDLRLGQCQSLTGIPELPLSLRDID-------AHNCTALLPGS- 1237

Query: 547  NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSL 606
            + +S+L  L+    N  +  E          L LF       P    S   S  S  TS 
Sbjct: 1238 SSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQLF-------PHIYVSSTASDSSVTTS- 1289

Query: 607  RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTI 666
                         P  + +++++            I  S+ FPG  IP+W  HQ+ GS+I
Sbjct: 1290 -------------PVMMQKLLEN------------IAFSIVFPGTGIPEWIWHQNVGSSI 1324

Query: 667  SLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNL----FDVVCDRRSEGYD 722
             ++ P     +  +GFA C V+          E + +   C+L    FD   D +  G+D
Sbjct: 1325 KIQLPTDWYSDDFLGFALCSVL----------EHLPERIICHLNSDVFD-YGDLKDFGHD 1373

Query: 723  SYTSSYLGKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFHIDR----SCCEV 770
             +   + G I  V S+HV+LG           F   N     +  F    R    +   V
Sbjct: 1374 FH---WTGDI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVV 1428

Query: 771  KKCGIHFVHAQ 781
            KKCG+  ++A+
Sbjct: 1429 KKCGVCLIYAE 1439


>gi|297846862|ref|XP_002891312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337154|gb|EFH67571.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1159

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 256/529 (48%), Gaps = 83/529 (15%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NIL 62
           E+ I+   F  M+ L+ L+ +    N   +   +G+ +   +LR   W  FP+    +I+
Sbjct: 479 ELNISERGFEGMSNLQFLRIYSDHINPGKMFLPQGLNYLSRKLRLLHWIHFPMTCFPSIV 538

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           + E LV L M  SK+ +LW+ ++ L +LK +DL  S  L  LPDLS A NL+ LD  +CS
Sbjct: 539 NPEFLVELVMCHSKLEKLWEGIKPLRNLKWMDLSSSVNLKVLPDLSTATNLKELDCSFCS 598

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCH 181
           SL +   SI     LE+L+L  C +L  LP+SI +   +K+   R CS+L  LP      
Sbjct: 599 SLVKLPFSIGNAINLEILNLYDCSNLVELPSSIGNLINIKKFNFRRCSSLVELPSSVGKA 658

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            +         +EEL   +   +N+ EL +Y+C  L  +  SI     L+  +I  C NL
Sbjct: 659 TK---------LEEL--ELGNATNLKELYLYNCSSLVKLPFSIGTFSHLKKFKISGCSNL 707

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFER 298
             +++ S   + T  K     EL    C     LPS      + T+LE++D   C N  +
Sbjct: 708 --VKLSSSIGNATDLK-----ELDFSFCSSLVELPS---YIGNATNLELLDLRGCSNLVQ 757

Query: 299 LPDELGN-LQALNRLIIDG-------------------------TAIRELPEGLGQLALL 332
           LP  +GN +  L+RL   G                         +++ ELP  +G L  L
Sbjct: 758 LPSSIGNAIVTLDRLDFSGCSSLVAIPSSIGKAINLKYLEFSGYSSLVELPASIGNLHKL 817

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPS 388
           S L L  CS+LE +  +I  L+S+E++ +++CS LK FPE    I + ++ G+ IE +P 
Sbjct: 818 SSLTLNRCSKLEVLPINI-NLQSLEALILTDCSLLKSFPEISTNISYLDLSGTAIEEVP- 875

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
             L ++  S+LE+L  S               + L+  P     L+ + +L +  T I+E
Sbjct: 876 --LSISLWSRLETLHMSY-------------SENLKNFPHA---LDIITDLHLSDTKIQE 917

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           V   + +++ L +L LK C+   SLP    +  SL+ L+  +C++  RL
Sbjct: 918 VAPWVKRISRLRRLVLKGCNKLLSLPQ---LPDSLSELDAENCESLERL 963



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 167/652 (25%), Positives = 286/652 (43%), Gaps = 86/652 (13%)

Query: 148  LTSLPTSIHSKYLKRLVL---------RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
            +T  P+ ++ ++L  LV+          G   L+NL  M    L S+     V ++ LP 
Sbjct: 531  MTCFPSIVNPEFLVELVMCHSKLEKLWEGIKPLRNLKWMD---LSSS-----VNLKVLPD 582

Query: 199  SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE 258
             +   +N+ EL    C  L  +  SI     LE + ++ C NL  +E+PS   +    K+
Sbjct: 583  -LSTATNLKELDCSFCSSLVKLPFSIGNAINLEILNLYDCSNL--VELPSSIGNLINIKK 639

Query: 259  QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
                    ++C     LPS       L  LE+ +  N + L             + + ++
Sbjct: 640  -----FNFRRCSSLVELPSSVGKATKLEELELGNATNLKEL------------YLYNCSS 682

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
            + +LP  +G  + L K ++  CS L  +SSSI     ++ ++ S CS+L    E+P    
Sbjct: 683  LVKLPFSIGTFSHLKKFKISGCSNLVKLSSSIGNATDLKELDFSFCSSLV---ELPSYIG 739

Query: 379  DGSGIERIPSSVLKLNKCSKLESLPSSLC-MFKSLTSLEIIDCKKLERLPDELGNLEALE 437
            + + +E     +L L  CS L  LPSS+     +L  L+   C  L  +P  +G    L+
Sbjct: 740  NATNLE-----LLDLRGCSNLVQLPSSIGNAIVTLDRLDFSGCSSLVAIPSSIGKAINLK 794

Query: 438  ELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
             L   G + + E+P S+  L  LS L L +CS  E LP  + + +SL +L + DC     
Sbjct: 795  YLEFSGYSSLVELPASIGNLHKLSSLTLNRCSKLEVLPININL-QSLEALILTDCSLLKS 853

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVS 554
             P+   N+ YL    + GTAI EVP S+   S LE L +S   NL+  P +L+ ++ L  
Sbjct: 854  FPEISTNISYLD---LSGTAIEEVPLSISLWSRLETLHMSYSENLKNFPHALDIITDL-- 908

Query: 555  LKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR 613
              LS+  ++ +   +  +S L+ L L   N L  +P+     P S+         S++  
Sbjct: 909  -HLSDTKIQEVAPWVKRISRLRRLVLKGCNKLLSLPQ----LPDSLSELDAENCESLERL 963

Query: 614  NCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQP 673
            +C  LDP   + II+    + SV            PG E+P +F +++ G ++ +K  + 
Sbjct: 964  DCSFLDPQARNVIIQTSTCEVSV-----------LPGREMPTYFTYRANGDSLRVKLNER 1012

Query: 674  TGYNKLMGFAFCVVVACSVSECCRHESVE-DDRKCNLFDVVCDRRSEGYDSYTSSYLGKI 732
               + L+ F  C+++         +  VE  D      D     +    D   S     +
Sbjct: 1013 PFPSSLI-FKACILLV-------NNNDVETGDEDIVFLDCCIVDKKSSVDVPCSPSNHIL 1064

Query: 733  SHVESDHVFLGSSIFAGENSCKRSDEFF-FHIDRSCCEVKKCGIHFVHAQRQ 783
                ++H++    IF  E     +D FF F I      +K+CG+H V+ +++
Sbjct: 1065 PPPLTEHLY----IFEFEADVTSNDLFFEFSISSVRWVIKECGVHNVNTKKR 1112


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 157/496 (31%), Positives = 232/496 (46%), Gaps = 64/496 (12%)

Query: 8    IQINPYTFSKMTELRLLK------FCGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL 59
            I +   +F+ M  L LLK      F   +    V   +   F+  ELRY  W  +PL++L
Sbjct: 573  IHVTTESFAMMKNLSLLKIYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGYPLESL 632

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILD 117
             +  + E+LV L M  S + QLW+    L  L  I L   + L ++PD+S+ A NLE L 
Sbjct: 633  PSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLT 692

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  CSSL + H SI  L+KL +L+L  CK L S  + I+ + L+ L L  CS LK  P +
Sbjct: 693  LDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKKFPDI 752

Query: 178  TSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                 HL   L L    IEELPSS++ L+ +  L +  CK L+++ +S+ KL+ LE +  
Sbjct: 753  QGNMEHLLE-LYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFP 811

Query: 236  HRCPNLQ-FLEM-------PSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQ 279
              C  L+ F EM           +DGT  +  PSS         L L+ C    SLP G 
Sbjct: 812  SGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGM 871

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            C   SL +L +  C     LP  LG+LQ L +   DGTAI + P+ +  L  L  L    
Sbjct: 872  CTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPG 931

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            C  L   S     L S+ S  +                     + R  S+ + L      
Sbjct: 932  CKRLAPTS-----LGSLFSFWL---------------------LHRNGSNGISLR----- 960

Query: 400  ESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-A 457
              LPS    F S T+L++ DCK +E  +P+ + +L +L++L +        P  +++L +
Sbjct: 961  --LPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRNDFLSTPAGISELTS 1018

Query: 458  LSKLKLKKCSSFESLP 473
            L  L+L +  S   +P
Sbjct: 1019 LKDLRLGQYQSLTEIP 1034



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 246/549 (44%), Gaps = 105/549 (19%)

Query: 281  MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
            + + L ++ +  C +   +PD   +   L +L +DG +++ ++   +G+L+ L  L LKN
Sbjct: 660  LLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKN 719

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV-- 390
            C +L    S I  ++++E + +S+CS LK FP+I           +  + IE +PSSV  
Sbjct: 720  CKKLRSFLS-IINMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEH 778

Query: 391  ------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
                  L L +C  L+SLP+S+C  +SL  L    C KLE  P+ + ++E L+EL ++GT
Sbjct: 779  LTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGT 838

Query: 445  GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I  +P S+ +L  L  L L+ C +  SLP  +    SL +L +  C     LP  +G+L
Sbjct: 839  SIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSL 898

Query: 504  EYLKVLTIKGTAI----------------------REVPESLGQLSSLEWLVLSDNNLQI 541
            ++L      GTAI                      R  P SLG L S  WL+  + +  I
Sbjct: 899  QHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSF-WLLHRNGSNGI 957

Query: 542  ---IPESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
               +P   +   S  +L LS+  L    IP  +  L SLK LDL  N+    P  +    
Sbjct: 958  SLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRNDFLSTPAGISELT 1017

Query: 597  -------------TSIPSEFTSLRLSVDLRNCLKLDPNELS----EIIKDGWMK------ 633
                         T IP    S+R  +   NC  L P   S     ++  G MK      
Sbjct: 1018 SLKDLRLGQYQSLTEIPKLPPSVR-DIHPHNCTALLPGPSSLRTNPVVIRG-MKYKDFHI 1075

Query: 634  -----QSVNGETY-----------ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN 677
                  SV+  T            I  S+ FPG+ IP+W  HQS GS+I ++ P     +
Sbjct: 1076 IVSSTASVSSLTTSPVLMQKLFENIAFSIVFPGSGIPEWIWHQSVGSSIKIELPTDWYND 1135

Query: 678  KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV---CDRRSEGYDSYTSSYLGKISH 734
              +GFA C V+          E + +   C+L   V    D +  G+D     +  K +H
Sbjct: 1136 DFLGFALCSVL----------EQLPERIICHLNSDVFYYGDLKDFGHD-----FHWKGNH 1180

Query: 735  VESDHVFLG 743
            V S+HV+LG
Sbjct: 1181 VGSEHVWLG 1189


>gi|297791059|ref|XP_002863414.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309249|gb|EFH39673.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1170

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 215/420 (51%), Gaps = 50/420 (11%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFC----GSKNKC-MVHSLEGVPFTELRYFEWHQFPL 56
           SKI+ ++ ++   F  M  LR LK      G +N+  +  S   +P T L+   W +FP+
Sbjct: 539 SKID-QLCVHKSAFKGMRNLRFLKIGTDIFGEENRLDLPESFNYLPPT-LKLLCWSEFPM 596

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           + + +    ENLV LKMP SK+ +LWD V  L  LK +DL  S  L ++PDLS+A NLE 
Sbjct: 597 RCMPSNFRPENLVKLKMPNSKLHKLWDGVVPLTCLKEMDLDGSVNLKEIPDLSMATNLET 656

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L+LG C SL E  S I+ LNKL  L+++ C +L +LPT  + K L  L  R CS L+  P
Sbjct: 657 LELGNCKSLVELPSFIRNLNKLLKLNMEFCNNLKTLPTGFNLKSLGLLNFRYCSELRTFP 716

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI----YSCKRLENISSSIFKLQFLE 231
           ++++    S L L G  IEELPS++  L N+ EL I       K+ E +      L  L 
Sbjct: 717 EISTN--ISDLYLTGTNIEELPSNLH-LENLVELSISKEESDGKQWEGVKPLTPLLAMLS 773

Query: 232 ----SIRIHRCPNLQFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
               S+ +   P+L  +E+PS   N++   S       L +  C   E+LP+G    +SL
Sbjct: 774 PTLTSLHLQNIPSL--VELPSSFQNLNNLES-------LDITNCRNLETLPTG-INLQSL 823

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            SL    C      P+   N+ +LN   +D T I E+P  +   + L  L +  CS L+ 
Sbjct: 824 YSLSFKGCSRLRSFPEISTNISSLN---LDETGIEEVPWWIENFSNLGLLSMDRCSRLKC 880

Query: 346 ISSSIFKLKSVESIEISNCS-----NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           +S  I KLK +  ++  +C      +L G+P         SG+E + +  +K++  SK++
Sbjct: 881 VSLHISKLKHLGKVDFKDCGELTRVDLSGYP---------SGMEEMEA--VKIDAVSKVK 929



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 57/400 (14%)

Query: 294 PN--FERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           PN    +L D +  L  L  + +DG+  ++E+P+ L     L  LEL NC  L  + S I
Sbjct: 614 PNSKLHKLWDGVVPLTCLKEMDLDGSVNLKEIPD-LSMATNLETLELGNCKSLVELPSFI 672

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             L  +  + +  C+NLK  P         +G       +L    CS+L + P       
Sbjct: 673 RNLNKLLKLNMEFCNNLKTLP---------TGFNLKSLGLLNFRYCSELRTFPEISTNIS 723

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRV--------EGTGIREVPKSLAQLA--LSK 460
            L     +    +E LP  L +LE L EL +        +  G++ +   LA L+  L+ 
Sbjct: 724 DL----YLTGTNIEELPSNL-HLENLVELSISKEESDGKQWEGVKPLTPLLAMLSPTLTS 778

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREV 519
           L L+   S   LPS      +L SL+I +C+N   LP  I NL+ L  L+ KG + +R  
Sbjct: 779 LHLQNIPSLVELPSSFQNLNNLESLDITNCRNLETLPTGI-NLQSLYSLSFKGCSRLRSF 837

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
           PE    +SSL    L +  ++ +P  +   S+L  L +   + L+ +   +  L  L  +
Sbjct: 838 PEISTNISSLN---LDETGIEEVPWWIENFSNLGLLSMDRCSRLKCVSLHISKLKHLGKV 894

Query: 579 DLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLS------VDLRNCLKLDPNELSEIIKDGW 631
           D  +   L R+   L  +P+ +  E  ++++       +D R+C  LDP  +        
Sbjct: 895 DFKDCGELTRVD--LSGYPSGM-EEMEAVKIDAVSKVKLDFRDCFNLDPETV-------- 943

Query: 632 MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTP 671
               ++ E+ + K M  PG ++P +F +++TG + SL  P
Sbjct: 944 ----LHQESIVFKYMLLPGEQVPSYFTYRTTGVS-SLTIP 978


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 157/496 (31%), Positives = 232/496 (46%), Gaps = 64/496 (12%)

Query: 8    IQINPYTFSKMTELRLLK------FCGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL 59
            I +   +F+ M  L LLK      F   +    V   +   F+  ELRY  W  +PL++L
Sbjct: 715  IHVTTESFAMMKNLSLLKIYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGYPLESL 774

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILD 117
             +  + E+LV L M  S + QLW+    L  L  I L   + L ++PD+S+ A NLE L 
Sbjct: 775  PSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLT 834

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  CSSL + H SI  L+KL +L+L  CK L S  + I+ + L+ L L  CS LK  P +
Sbjct: 835  LDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKKFPDI 894

Query: 178  TSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                 HL   L L    IEELPSS++ L+ +  L +  CK L+++ +S+ KL+ LE +  
Sbjct: 895  QGNMEHLLE-LYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFP 953

Query: 236  HRCPNLQ-FLEM-------PSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQ 279
              C  L+ F EM           +DGT  +  PSS         L L+ C    SLP G 
Sbjct: 954  SGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGM 1013

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            C   SL +L +  C     LP  LG+LQ L +   DGTAI + P+ +  L  L  L    
Sbjct: 1014 CTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPG 1073

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            C  L   S     L S+ S  +                     + R  S+ + L      
Sbjct: 1074 CKRLAPTS-----LGSLFSFWL---------------------LHRNGSNGISLR----- 1102

Query: 400  ESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-A 457
              LPS    F S T+L++ DCK +E  +P+ + +L +L++L +        P  +++L +
Sbjct: 1103 --LPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRNDFLSTPAGISELTS 1160

Query: 458  LSKLKLKKCSSFESLP 473
            L  L+L +  S   +P
Sbjct: 1161 LKDLRLGQYQSLTEIP 1176



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 246/549 (44%), Gaps = 105/549 (19%)

Query: 281  MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
            + + L ++ +  C +   +PD   +   L +L +DG +++ ++   +G+L+ L  L LKN
Sbjct: 802  LLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKN 861

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV-- 390
            C +L    S I  ++++E + +S+CS LK FP+I           +  + IE +PSSV  
Sbjct: 862  CKKLRSFLS-IINMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEH 920

Query: 391  ------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
                  L L +C  L+SLP+S+C  +SL  L    C KLE  P+ + ++E L+EL ++GT
Sbjct: 921  LTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGT 980

Query: 445  GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I  +P S+ +L  L  L L+ C +  SLP  +    SL +L +  C     LP  +G+L
Sbjct: 981  SIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSL 1040

Query: 504  EYLKVLTIKGTAI----------------------REVPESLGQLSSLEWLVLSDNNLQI 541
            ++L      GTAI                      R  P SLG L S  WL+  + +  I
Sbjct: 1041 QHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSLFSF-WLLHRNGSNGI 1099

Query: 542  ---IPESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
               +P   +   S  +L LS+  L    IP  +  L SLK LDL  N+    P  +    
Sbjct: 1100 SLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSRNDFLSTPAGISELT 1159

Query: 597  -------------TSIPSEFTSLRLSVDLRNCLKLDPNELS----EIIKDGWMK------ 633
                         T IP    S+R  +   NC  L P   S     ++  G MK      
Sbjct: 1160 SLKDLRLGQYQSLTEIPKLPPSVR-DIHPHNCTALLPGPSSLRTNPVVIRG-MKYKDFHI 1217

Query: 634  -----QSVNGETY-----------ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN 677
                  SV+  T            I  S+ FPG+ IP+W  HQS GS+I ++ P     +
Sbjct: 1218 IVSSTASVSSLTTSPVLMQKLFENIAFSIVFPGSGIPEWIWHQSVGSSIKIELPTDWYND 1277

Query: 678  KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV---CDRRSEGYDSYTSSYLGKISH 734
              +GFA C V+          E + +   C+L   V    D +  G+D     +  K +H
Sbjct: 1278 DFLGFALCSVL----------EQLPERIICHLNSDVFYYGDLKDFGHD-----FHWKGNH 1322

Query: 735  VESDHVFLG 743
            V S+HV+LG
Sbjct: 1323 VGSEHVWLG 1331


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 197/376 (52%), Gaps = 35/376 (9%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMV-HSLEGVPFT--ELRYFEWHQFPLKTL-NILH 63
           + I+   F  M  L  L F   + K +  H  EG      +LR   W ++PL+ + +   
Sbjct: 544 LYIHESAFKGMRNLLFLNFYTKQKKDVTWHLSEGFDHLPPKLRLLSWEKYPLRCMPSNFR 603

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            ENLV L+M  SK+ +LWD V +L  L+ +DL+ S+ L ++PDLSLA NL+ LD+  C+S
Sbjct: 604 PENLVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPDLSLATNLKKLDVSNCTS 663

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E  S+IQ LN+LE L ++RC++L +LP  I+ + L  L L GCS L++ P +++    
Sbjct: 664 LVELSSTIQNLNQLEELQMERCENLENLPIGINLESLYCLNLNGCSKLRSFPDISTT--I 721

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-LQFLESIRIHRCPNLQ 242
           S L L    IEE P+ +  L N+  L +Y  K     S  ++K +Q L  +     P+L 
Sbjct: 722 SELYLSETAIEEFPTELH-LENLYYLGLYDMK-----SEKLWKRVQPLTPLMTMLSPSLT 775

Query: 243 FL---EMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEII 291
            L   ++PS         E PSS         L + +C   E+LP+G    + L  L+  
Sbjct: 776 KLFLSDIPSL-------VELPSSFQNLHNLEHLNIARCTNLETLPTG-VNLELLEQLDFS 827

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C      PD   N+ +   L++DGT I E+P  +     LS L +  C+ L+ +S +I 
Sbjct: 828 GCSRLRSFPDISTNIFS---LVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNIS 884

Query: 352 KLKSVESIEISNCSNL 367
           KL+ +E+++ S+C  L
Sbjct: 885 KLEKLETVDFSDCEAL 900



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 168/389 (43%), Gaps = 53/389 (13%)

Query: 297 ERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           E+L D + +L  L  + + G+  ++E+P+ L     L KL++ NC+ L  +SS+I  L  
Sbjct: 618 EKLWDGVHSLTGLRNMDLRGSENLKEIPD-LSLATNLKKLDVSNCTSLVELSSTIQNLNQ 676

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           +E +++  C NL+  P          GI       L LN CSKL S P        L   
Sbjct: 677 LEELQMERCENLENLP---------IGINLESLYCLNLNGCSKLRSFPDISTTISELYLS 727

Query: 416 EIIDCKKLERLPDELGNLE-----ALEELRVEGTGIREVP----KSLAQLALSKLKLKKC 466
           E      +E  P EL +LE      L +++ E    R  P     ++   +L+KL L   
Sbjct: 728 ET----AIEEFPTEL-HLENLYYLGLYDMKSEKLWKRVQPLTPLMTMLSPSLTKLFLSDI 782

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQ 525
            S   LPS      +L  L I  C N   LP  + NLE L+ L   G + +R  P+    
Sbjct: 783 PSLVELPSSFQNLHNLEHLNIARCTNLETLPTGV-NLELLEQLDFSGCSRLRSFPDISTN 841

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD----- 579
           + S   LVL    ++ +P  +     L  L +   NNL+ +   +  L  L+ +D     
Sbjct: 842 IFS---LVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLEKLETVDFSDCE 898

Query: 580 -LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG 638
            L   N D IP  +     +I S+   L + +   NC  LD        K   ++QS   
Sbjct: 899 ALSHANWDTIPSAVAMATENIHSK---LPVCIKFSNCFNLDH-------KAVLLQQS--- 945

Query: 639 ETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
              I K +   G E+  +F H++TG++++
Sbjct: 946 ---IFKQLILSGGEMFSYFTHRTTGTSLT 971


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 171/606 (28%), Positives = 273/606 (45%), Gaps = 118/606 (19%)

Query: 101  LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
            LT +PDLS  Q LE L L +C  L + H SI  +  L  LDL  CK+L   P+ +   K 
Sbjct: 730  LTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKN 789

Query: 160  LKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRL 217
            L  L+L GCS LK LP+  S +++S   LL  G  IE+LP S+  L+ +  L + +C+ L
Sbjct: 790  LXTLILSGCSKLKELPENIS-YMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSL 848

Query: 218  ENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
            + + + I KL+ L  +                + + +  +E P S               
Sbjct: 849  KQLPTCIGKLESLREL----------------SFNDSALEEIPDS--------------- 877

Query: 278  GQCMFKSLTSLE---IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
                F SLT+LE   ++ C +   +PD + NL+ L   +++G+ + ELP  +G L+ L  
Sbjct: 878  ----FGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSNLKD 933

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV---- 390
            L +  C  L  + +SI  L S+  ++                 +DG+ I  +P  +    
Sbjct: 934  LSVGXCRFLSKLPASIEGLASMVXLQ-----------------LDGTSIMDLPDQIGGLK 976

Query: 391  ----LKLNKCSKLESLPSSLCMFKSLTSLEIID-----------------------CKKL 423
                L++  C +LESLP ++    SL +L I+D                       CK+L
Sbjct: 977  TLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRL 1036

Query: 424  ERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSL 482
             RLP  +G L++L  L +E T +R++P+S   L +L +L + K    E LP  L  +++ 
Sbjct: 1037 RRLPGSIGXLKSLHHLXMEETAVRQLPESFGMLTSLMRLLMAKRPHLE-LPQALGPTET- 1094

Query: 483  TSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNLQI 541
              L   +    + LP    NL  L  L  +   I  ++P+   +LSSLE L L  NN   
Sbjct: 1095 KVLGAEENSELIVLPTSFSNLSLLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSS 1154

Query: 542  IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP 600
            +P SL  LS L  L L +   L+ +P    PL S     L E N          +   + 
Sbjct: 1155 LPSSLRGLSILRKLLLPHCEELKALP----PLPS----SLMEVN------AANCYALEVI 1200

Query: 601  SEFTSLR--LSVDLRNCLKL---DPNELSEIIKDGWMKQSVNGETYIT----KSMYFPGN 651
            S+ ++L     ++L NC KL      E  + +K  +M    +  + +     +++  PG+
Sbjct: 1201 SDLSNLESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVALKNLRTLSIPGS 1260

Query: 652  EIPKWF 657
             IP WF
Sbjct: 1261 NIPDWF 1266



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 181/361 (50%), Gaps = 44/361 (12%)

Query: 272  PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLA 330
            P  LP    + ++L  +    C N   +PD  GN QAL +LI+     + ++ + +G + 
Sbjct: 706  PLLLPYQDVVGENLMVMNXHGCCNLTAIPDLSGN-QALEKLILQHCHGLVKIHKSIGDII 764

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-IPFCN------IDGSGI 383
             L  L+L  C  L    S +  LK++ ++ +S CS LK  PE I +        +DG+ I
Sbjct: 765  SLLHLDLSECKNLVEFPSDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGTVI 824

Query: 384  ERIPSSVLK--------LNKCSKLESLPSSLCM--------------------FKSLTSL 415
            E++P SVL+        LN C  L+ LP+ +                      F SLT+L
Sbjct: 825  EKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNL 884

Query: 416  E---IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFES 471
            E   ++ C+ +  +PD + NL+ L E  + G+ + E+P S+  L+ L  L +  C     
Sbjct: 885  ERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGXCRFLSK 944

Query: 472  LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLE 530
            LP+ +    S+  L+ +D  + M LPD+IG L+ L+ L ++    +  +PE++G + SL 
Sbjct: 945  LPASIEGLASMVXLQ-LDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLN 1003

Query: 531  WLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             L++ D  +  +PES+ +L +L+ L L+    L R+P  +  L SL +L + E  + ++P
Sbjct: 1004 TLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLPGSIGXLKSLHHLXMEETAVRQLP 1063

Query: 590  E 590
            E
Sbjct: 1064 E 1064



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 55/318 (17%)

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD----LSLAQNLEILDLGYC 121
            ++V L++ G+ +  L D +  L +L+R+++++ K L  LP+    +     L I+D    
Sbjct: 954  SMVXLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVD---- 1009

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            + +TE   SI  L  L +L+L++CK L  LP SI               LK+L       
Sbjct: 1010 APMTELPESIGKLENLIMLNLNKCKRLRRLPGSI-------------GXLKSL------- 1049

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                L +    + +LP S   L+++  LL+     LE   +    L   E+  +    N 
Sbjct: 1050 --HHLXMEETAVRQLPESFGMLTSLMRLLMAKRPHLELPQA----LGPTETKVLGAEENS 1103

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP--NFERL 299
            + + +P+     + S      EL  +       +P     F  L+SLEI++    NF  L
Sbjct: 1104 ELIVLPT-----SFSNLSLLYELDARAWKISGKIPDD---FDKLSSLEILNLGRNNFSSL 1155

Query: 300  PDELGNLQALNRLII----DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            P  L  L  L +L++    +  A+  LP        L ++   NC  LE I S +  L+S
Sbjct: 1156 PSSLRGLSILRKLLLPHCEELKALPPLPSS------LMEVNAANCYALEVI-SDLSNLES 1208

Query: 356  VESIEISNCSNLKGFPEI 373
            ++ + ++NC  L   P +
Sbjct: 1209 LQELNLTNCKKLVDIPGV 1226


>gi|297790450|ref|XP_002863115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308939|gb|EFH39374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 196/703 (27%), Positives = 302/703 (42%), Gaps = 130/703 (18%)

Query: 3    KINSEIQINPYTFSKMTELRLLKFCGSKNKCMV-HSLEGVPFTELRYFEWHQFPLKTLN- 60
            +I  ++ I+   F  M+ L+ L+F G+ N   + H LE +   +LR   W  FP+  L  
Sbjct: 516  RIKEKLHISERAFQGMSNLQFLRFEGNNNTLHLPHGLEYIS-RKLRLLHWTYFPMTCLPP 574

Query: 61   ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
            I + + LV L M  SK+ +LW+ ++ L +LKR+DL+ S LL +LPDLS A NL+ L+L  
Sbjct: 575  IFNTDFLVELDMRCSKLEKLWEGIKPLPNLKRMDLRSSLLLKELPDLSTATNLQKLNLSG 634

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            CSSL +  S+I Y   L  L L  C SL  L  SI              NL NL ++   
Sbjct: 635  CSSLVKPPSTIGYTKNLRKLYLGGCSSLVELSFSI-------------GNLINLKELDLS 681

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
             L   +        ELP SI   +N+ +L +  C  L  + SSI  L  L+ +       
Sbjct: 682  SLSCLV--------ELPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELD------ 727

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
               L   SC ++                      LPS      +L  L++        LP
Sbjct: 728  ---LSSLSCMVE----------------------LPSSIGNLINLKELDLSSLSCLVELP 762

Query: 301  DELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
              +GN   L+ L + G +++ ELP  +G L  L  L L + S L  +  SI    ++E +
Sbjct: 763  SSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEDL 822

Query: 360  EISNCSNLKGFPEIPFCNIDG-SGIERIPSSV-------LKLNKCSKLESLPSSLCMFKS 411
             +  CSNLK    +   N+ G S +E +P+++       L L  CS L  LP S+   + 
Sbjct: 823  NLRQCSNLK----LQTLNLRGCSKLEVLPANIKLGSLRKLNLQHCSNLVKLPFSIGNLQK 878

Query: 412  LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK-KCSSFE 470
            L +L +  C KLE LP  +     LE L +       + K   +++ +   L  K ++ E
Sbjct: 879  LQTLTLRGCSKLEDLPANI----KLESLCLLDLTDCLLLKRFPEISTNVETLYLKGTTIE 934

Query: 471  SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
             +PS +     LT L +   +N M  P      + +  L +  T I+E+P  + + S L 
Sbjct: 935  EVPSSIKSWSRLTYLHMSYSENLMNFPHA---FDIITRLYVTNTEIQELPPWVKKFSHLR 991

Query: 531  WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L+L                 LVSL        +IP+      S+ Y+D  +       E
Sbjct: 992  ELILKG------------CKKLVSLP-------QIPD------SITYIDAED------CE 1020

Query: 591  YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG 650
             L     S    F    + V+   C KL+      II           +T  +     PG
Sbjct: 1021 SLEKLDCS----FHDPEIRVNSAKCFKLNQEARDLII-----------QTPTSNYAILPG 1065

Query: 651  NEIPKWFRHQS-TGSTISLK---TPQPTGYNKLMGFAFCVVVA 689
             E+P +F HQS TG ++++K    P PT     M F  C+++ 
Sbjct: 1066 REVPAYFTHQSATGGSLTIKLNEKPLPTS----MRFKACILLV 1104


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 215/803 (26%), Positives = 329/803 (40%), Gaps = 160/803 (19%)

Query: 10   INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLV 68
            +N     KM +L    F    NK  +      P  ELRY  WH +PL++L +  + E+LV
Sbjct: 707  VNRVLTRKMWDLEX-AFMREDNKVKLSKDFEFPSYELRYLHWHGYPLESLPLGFYAEDLV 765

Query: 69   SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILDLGYCSSLTET 127
             L M  S + +LW+    L  L  I +  S+ L ++PD+ + A NLE L L  CSSL E 
Sbjct: 766  ELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSLLEV 825

Query: 128  HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
            H SI  LNKL +L+L  CK L   P+ I  K L+ L    CS LK  P +          
Sbjct: 826  HPSIGKLNKLFLLNLKNCKKLICFPSIIDMKALEILNFSSCSGLKKFPNIQGN------- 878

Query: 188  LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                           + N+ EL + S   +E + SSI  L  L  + +  C NL+     
Sbjct: 879  ---------------MENLLELYLASTA-IEELPSSIGHLTGLVLLDLKWCKNLK----- 917

Query: 248  SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
                                      SLP+  C  KSL +L +  C   E  P+   N+ 
Sbjct: 918  --------------------------SLPTSICKLKSLENLSLSGCSKLESFPEVTENMD 951

Query: 308  ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
             L  L++DGT I  LP  + +L  L  L L+ C  L  +S+ +  L S+E++ +S CS L
Sbjct: 952  NLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSNGMCNLTSLETLIVSGCSQL 1011

Query: 368  KGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
               P        +   + DG+ I + P S++                + ++L  L    C
Sbjct: 1012 NNLPRNLGSLQCLAQLHADGTAIAQPPDSIV----------------LLRNLQVLIYPGC 1055

Query: 421  KKLERLPDELGNLEALEELRV---EGTGIREVPKSLAQLALSKLKLKKCSSFE-SLPSRL 476
            K L   P+ LG+L +   L      G G+R      +  +LS L +  C   E ++P+ +
Sbjct: 1056 KILA--PNSLGSLFSFWLLHGNSPNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGI 1113

Query: 477  YVSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKG----TAIREVPESLGQLSSLE 530
                SL SL+ +D    NF+ +P  I  L  LK L +      T I E+P S+  +    
Sbjct: 1114 C---SLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDID--- 1167

Query: 531  WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
                + N   ++P S + +S+L  L+    N  +  E          L +F       P 
Sbjct: 1168 ----AHNCTALLPGS-SSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIF-------PH 1215

Query: 591  YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG 650
               S   S  S  TS              P  + +++++            I  S+ FPG
Sbjct: 1216 IYVSSTASDSSVTTS--------------PVMMQKLLEN------------IAFSIVFPG 1249

Query: 651  NEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLF 710
              IP W  HQ+ GS+I ++ P     +  +GFA C V+         H +       ++F
Sbjct: 1250 TGIPDWIWHQNVGSSIKIQLPTDWYSDDFLGFALCSVLEHLPERIICHLN------SDVF 1303

Query: 711  DVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFH 762
            D   D +  G+D +   + G I  V S+HV+LG           F   N     +  F  
Sbjct: 1304 D-YGDLKDFGHDFH---WTGNI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEA 1357

Query: 763  IDR----SCCEVKKCGIHFVHAQ 781
              R    +   VKKCG+  ++A+
Sbjct: 1358 AHRFNSSASNVVKKCGVCLIYAE 1380


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 167/607 (27%), Positives = 298/607 (49%), Gaps = 69/607 (11%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVP-----FTELRYFEWHQFPLKTL- 59
           +++Q  P    ++  LR L    +K       LE +P        LR    +   LKTL 
Sbjct: 78  NQLQALPEDIGQLQNLRELYLSDNK-------LEALPEDIGNLKNLRTLHLYNNQLKTLP 130

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
             I   +NL  L +  +K+  L +D+ NL +L+ +DL  ++L T   ++   QNL+ L L
Sbjct: 131 EEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQNLQELYL 190

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
              + L      I  L  L++LDL R K L +LP  I               L+NLPK+ 
Sbjct: 191 S-DNKLEALPEDIGNLKNLQILDLSRNK-LEALPKEI-------------GKLRNLPKLD 235

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
             H +         +E LP  I  L N+ ++L     +LE +   I +LQ L  + ++  
Sbjct: 236 LSHNQ---------LETLPEEIGQLQNL-QILDLRYNQLETLPEEIGQLQNLRELHLYNN 285

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
             L+ L      +   R+    +++L        E+LP      K+L +L +   P  + 
Sbjct: 286 -KLKALPKEIGKLKNLRTLNLSTNKL--------EALPEEIGNLKNLRTLNLQYNP-LKT 335

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E+G LQ L  L +    +  LP+ +GQL  L KL+L + ++L+ +   I +L+++  
Sbjct: 336 LPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSH-NQLQALPKEIGQLQNLRE 394

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN-------KCSKLESLPS 404
           + + N + L+  PE       +   ++  + +E +P  + +L        + ++LE+LP 
Sbjct: 395 LHLYN-NQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPK 453

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   ++L  L +    KLE LP E+G L+ L++L ++   ++ +PK + +L  L KL L
Sbjct: 454 EIGKLQNLQELNL-RYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNL 512

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           +  +  ++LP  +   K+L  L++ + +    LP EIG L+ L+ L ++   +  +P+ +
Sbjct: 513 Q-YNQLKTLPKDIGKLKNLRELDLRNNQ-LKTLPKEIGKLQNLQELNLRYNKLETLPKEI 570

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           G+L +L+ L LS N LQ +P+ + +L +L  L LS N L+ +P+ +  L +L+ LDL  N
Sbjct: 571 GKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNN 630

Query: 584 NLDRIPE 590
            L  +P+
Sbjct: 631 PLKTLPK 637



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 168/653 (25%), Positives = 304/653 (46%), Gaps = 103/653 (15%)

Query: 35  VHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRID 94
           + + E V +T+LR             + +   +  L +  +K+  L  ++  L +L+ +D
Sbjct: 26  IQAKEAVTYTDLRKA-----------LANPSKVFVLDLSSNKLKTLPKEIGKLKNLQELD 74

Query: 95  LKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVL--DLDRCKSLTSLP 152
           L +++ L  LP+          D+G   +L E + S    NKLE L  D+   K+L +L 
Sbjct: 75  LSHNQ-LQALPE----------DIGQLQNLRELYLSD---NKLEALPEDIGNLKNLRTL- 119

Query: 153 TSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY 212
             +++  LK L       L+NL           L L    +E LP  I  L N+ ++L  
Sbjct: 120 -HLYNNQLKTLP-EEIGKLQNL---------QELYLSDNKLEALPEDIGNLKNL-QILDL 167

Query: 213 SCKRLENISSSIFKLQFLESI------------RIHRCPNLQFLEMPSCNIDGTRSKEQP 260
           S  +L+ +   I KLQ L+ +             I    NLQ L++    ++       P
Sbjct: 168 SRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEAL-----P 222

Query: 261 SSELKLKKCPR-------PESLPSGQCMFKSLTSLEIIDC--PNFERLPDELGNLQALNR 311
               KL+  P+        E+LP        L +L+I+D      E LP+E+G LQ L  
Sbjct: 223 KEIGKLRNLPKLDLSHNQLETLPEE---IGQLQNLQILDLRYNQLETLPEEIGQLQNLRE 279

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L +    ++ LP+ +G+L  L  L L + ++LE +   I  LK++ ++ +   + LK  P
Sbjct: 280 LHLYNNKLKALPKEIGKLKNLRTLNL-STNKLEALPEEIGNLKNLRTLNLQ-YNPLKTLP 337

Query: 372 E-------IPFCNIDGSGIERIPSSVLKLNKCSK-------LESLPSSLCMFKSLTSLEI 417
           E       +P  ++  + +E +P  + +L    K       L++LP  +   ++L  L +
Sbjct: 338 EEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHL 397

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
            +  +LE LP+E+G L+ L+ L +    +  +PK + QL   ++   + +  E+LP  + 
Sbjct: 398 YN-NQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIG 456

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L  L +   K    LP EIG L+ L+ L ++   ++ +P+ +G+L +L+ L L  N
Sbjct: 457 KLQNLQELNLRYNK-LEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYN 515

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE---YLRS 594
            L+ +P+ + +L +L  L L NN L+ +P+ +  L +L+ L+L  N L+ +P+    LR+
Sbjct: 516 QLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRN 575

Query: 595 FP---------TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG 638
                       ++P E   L   V+LR  L L  N+L  + K+    Q++ G
Sbjct: 576 LKILYLSHNQLQALPKEIEKL---VNLRK-LYLSGNQLQALPKEIGKLQNLQG 624


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 176/730 (24%), Positives = 324/730 (44%), Gaps = 138/730 (18%)

Query: 152  PTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLRST--LPLLGVGIEELPSSIKCLSNIGE 208
            PTSI +S+    L   G SNL+  P +   ++RS   L L    I+ELP SI  L ++  
Sbjct: 533  PTSIENSRSFWDLDPCGHSNLEKFPGIQG-NMRSLRLLYLSKTAIKELPGSID-LESVES 590

Query: 209  LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK 268
            L +  C + +    +   ++ L  + +     ++ L +   N +  R+       L L K
Sbjct: 591  LDLSYCSKFKKFPENGANMKSLRELDLTHTA-IKELPIGISNWESLRT-------LDLSK 642

Query: 269  CPRPESLPSGQC-----------------------MFKSLTSLEIIDCPNFERLPDELGN 305
            C + E  P+ Q                          KSL  L + DC  FE  P++ GN
Sbjct: 643  CSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGN 702

Query: 306  LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE---------------YISSSI 350
            ++ L +L++  T I++LP+G+G+L  L  L+L +CS+ E               Y++++ 
Sbjct: 703  MKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLTNTA 762

Query: 351  FK--------LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
             K        L+S+  +++SNCS  + FPE    N+   G+  + ++ +K         L
Sbjct: 763  IKDLPNSIGSLESLVELDLSNCSKFEKFPE-KGGNMKSLGMLYLTNTAIK--------DL 813

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKL 461
            P S+   +SL  L++ +C K E+ P++ GN+++L  LR+  T I+++P S+  L +L +L
Sbjct: 814  PDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVEL 873

Query: 462  KLKKCSSFESLPSR---------LYVSK--------SLTSLEIID-----CKNFMRLPDE 499
             L  CS FE  P +         LY++         S+ SL+++D     C  F + P+ 
Sbjct: 874  DLSNCSKFEKFPEKGGNMKRLGVLYLTNTAIKDLPDSIGSLDLVDLDLSNCSQFEKFPEL 933

Query: 500  IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
              ++  L+ L ++ TAI+E+P S+  +S L  L +S+  NL+ +P+ +++L  L SL L 
Sbjct: 934  KRSMLELRTLNLRRTAIKELPSSIDNVSGLWDLDISECKNLRSLPDDISRLEFLESLILG 993

Query: 559  NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL-K 617
                  + E L   + L+ L     +  ++ E     P+S+          +D  +C  K
Sbjct: 994  G--CSNLWEGLIS-NQLRNLGKLNTSQWKMAEKTLELPSSLER--------IDAHHCTSK 1042

Query: 618  LDPNELSEIIKDGWMKQSVNGETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQ---- 672
             D + L  +    W+K +         S   P  + IP+W R+ + GS ++ + P     
Sbjct: 1043 EDLSSLLWLCHLNWLKSATEELKCWKLSAVIPESSGIPEWIRYDNLGSELTTELPTNWYE 1102

Query: 673  ----------------PTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDR 716
                            PT ++  + + F    +C ++        +D+R+   F   C+ 
Sbjct: 1103 DPDLLGFVVSCVYQPIPTSHDPRISYHFSSAFSCELNLHGNGFGFKDERR---FGCRCEC 1159

Query: 717  RSEGYDSYTSSYLGKI--SHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCG 774
            +    D     ++     + +  +H+   + I    N+  +S+ ++         VKKCG
Sbjct: 1160 QGNFNDMIDQVWVWWYPKTAIPKEHLHNSTHI----NASFKSNTYYC----DAVNVKKCG 1211

Query: 775  IHFVHAQRQR 784
            I+ + A  Q+
Sbjct: 1212 INLIFAGDQQ 1221



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 227/508 (44%), Gaps = 99/508 (19%)

Query: 75   SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
            SK  +  ++  N+ SL+ +DL ++ +      +S  ++L  LDL  CS   +  +    +
Sbjct: 597  SKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNM 656

Query: 135  NKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVG 192
              L+ L L+   ++   P SI + K L+ L +  CS  +N P K  +      L L    
Sbjct: 657  RNLKELLLNNT-AIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTP 715

Query: 193  IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
            I++LP  I  L ++  L +  C + E         +F E     +  N++ L M    + 
Sbjct: 716  IKDLPDGIGELESLEILDLSDCSKFE---------KFPE-----KGGNMKSLGM--LYLT 759

Query: 253  GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             T  K+ P+S   L                +SL  L++ +C  FE+ P++ GN+++L  L
Sbjct: 760  NTAIKDLPNSIGSL----------------ESLVELDLSNCSKFEKFPEKGGNMKSLGML 803

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
             +  TAI++LP+ +G L  L +L+L NCS+ E        +KS+  + + N +       
Sbjct: 804  YLTNTAIKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTA------- 856

Query: 373  IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
                                      ++ LP S+   +SL  L++ +C K E+ P++ GN
Sbjct: 857  --------------------------IKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGN 890

Query: 433  LEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE---------------------- 470
            ++ L  L +  T I+++P S+  L L  L L  CS FE                      
Sbjct: 891  MKRLGVLYLTNTAIKDLPDSIGSLDLVDLDLSNCSQFEKFPELKRSMLELRTLNLRRTAI 950

Query: 471  -SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA------IREVPESL 523
              LPS +     L  L+I +CKN   LPD+I  LE+L+ L + G +      I     +L
Sbjct: 951  KELPSSIDNVSGLWDLDISECKNLRSLPDDISRLEFLESLILGGCSNLWEGLISNQLRNL 1010

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSS 551
            G+L++ +W  +++  L+ +P SL ++ +
Sbjct: 1011 GKLNTSQW-KMAEKTLE-LPSSLERIDA 1036


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 200/430 (46%), Gaps = 92/430 (21%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+      F +MT LR LKF   +N  +    E +P  ELR+ +WH +P K+L N    +
Sbjct: 548 EVNFGGKAFMQMTRLRFLKF---QNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGD 603

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LVSLK+  S++ QLW   ++L  LK ++L +S+ L ++PD S+  NLE L L  C+SL 
Sbjct: 604 QLVSLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLV 663

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM-TSCHLRS 184
           E + SI+ L KL +L+L  C++L +LP  I  + L+ LVL GCS L+  P++    +  +
Sbjct: 664 EINFSIENLGKLVLLNLKNCRNLKTLPKRIRLEKLEILVLTGCSKLRTFPEIEEKMNCLA 723

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    + ELP+S++ LS +G + +  CK LE++ SSIF+L+ L+++ +  C      
Sbjct: 724 ELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS----- 778

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                               KLK  P                              D+LG
Sbjct: 779 --------------------KLKNLP------------------------------DDLG 788

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS--------------SSI 350
            L  L +L    TAI+ +P  +  L  L +L L  C+ L                   ++
Sbjct: 789 LLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSHGQKSMGVNFQNL 848

Query: 351 FKLKSVESIEISNC--------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNK------- 395
             L S+  +++S+C        SNL   P +    +DG+    IP++ +           
Sbjct: 849 SGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFSNIPAASISRLTRLKTLKL 908

Query: 396 --CSKLESLP 403
             C +LESLP
Sbjct: 909 LGCGRLESLP 918



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 239/503 (47%), Gaps = 75/503 (14%)

Query: 226  KLQFLESIRIHRCPNLQFL--EMPSCNIDGTRSKEQPSS-------ELKLKKCPRPESLP 276
            +L+FL+    + C   +FL  E+   +  G  SK  P+S        LKLKK    +   
Sbjct: 561  RLRFLKFQNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLKLKKSRIIQLWK 620

Query: 277  S----GQCMFKSLT-SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP---EGLG 327
            +    G+  + +L+ S ++I  P+F   P+       L RL+++  T++ E+    E LG
Sbjct: 621  TSKDLGKLKYMNLSHSQKLIRMPDFSVTPN-------LERLVLEECTSLVEINFSIENLG 673

Query: 328  QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDG 380
            +L LL+   LKNC  L+ +   I +L+ +E + ++ CS L+ FPEI           +D 
Sbjct: 674  KLVLLN---LKNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLDA 729

Query: 381  SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            + +  +P+SV        + L+ C  LESLPSS+   K L +L++  C KL+ LPD+LG 
Sbjct: 730  TSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGL 789

Query: 433  LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            L  LE+L    T I+ +P S++ L  L +L L  C++  S  S     +    +      
Sbjct: 790  LVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSHGQKSMGV------ 843

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIP-ESLNQ 548
            NF  L      L  L +L +    I +  +  +LG L SLE L+L  NN   IP  S+++
Sbjct: 844  NFQNL----SGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFSNIPAASISR 899

Query: 549  LSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
            L+ L +LKL     LE +PE L P  S+K +   E       + L  +P    + F    
Sbjct: 900  LTRLKTLKLLGCGRLESLPE-LPP--SIKGIYANECTSLMSIDQLTKYPMLSDASF---- 952

Query: 608  LSVDLRNCLKLDPNELSEIIKDGWMKQSVNG-ETYITKSMYFPGNEIPKWFRHQSTGSTI 666
                 RNC +L  N+    + D  +KQ +      +    Y PG EIP+WF ++S G T 
Sbjct: 953  -----RNCRQLVKNKQHTSMVDSLLKQMLEALYMNVRFGFYVPGMEIPEWFTYKSWG-TQ 1006

Query: 667  SLKTPQPTGY--NKLMGFAFCVV 687
            S+    PT +      GF  CVV
Sbjct: 1007 SMSVALPTNWLTPTFRGFTVCVV 1029


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 201/431 (46%), Gaps = 68/431 (15%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+      F +MT LR LKF   +N  +    E +P  ELR+ +WH +P K+L N    +
Sbjct: 548 EVNFGGKAFMQMTRLRFLKF---RNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGD 603

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV LK+  S++ QLW   ++L  LK ++L +S+ L + PD S+  NLE L L  C+SL 
Sbjct: 604 QLVGLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLV 663

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM-TSCHLRS 184
           E + SI+ L KL +L+L  C++L +LP  I  + L+ LVL GCS L+  P++    +  +
Sbjct: 664 EINFSIENLGKLVLLNLKNCRNLKTLPKRIRLEKLEILVLTGCSKLRTFPEIEEKMNCLA 723

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    +  LP+S++ LS +G + +  CK LE++ SSIF+L+ L+++ +  C      
Sbjct: 724 ELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS----- 778

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                               KLK  P                              D+LG
Sbjct: 779 --------------------KLKNLP------------------------------DDLG 788

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            L  L +L    TAI  +P  +  L  L +L L+ C+ L    SS    +    +   N 
Sbjct: 789 LLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSHGQKSMGVNFQNL 848

Query: 365 SNLKGFPEIPF--CNIDGSGIER----IPSSVLKLNKCSKLESLP-SSLCMFKSLTSLEI 417
           S L     +    C+I   GI R    + S  + L   +   ++P +S+     L SL +
Sbjct: 849 SGLCSLIRLDLSDCDISDGGILRNLGFLSSLKVLLLDGNNFSNIPAASISRLTRLKSLAL 908

Query: 418 IDCKKLERLPD 428
             C +LE LP+
Sbjct: 909 RGCGRLESLPE 919



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 155/356 (43%), Gaps = 61/356 (17%)

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            +L L  C  L++LP  + + K L  L +  C KL   P+    +  L EL +  T +  +
Sbjct: 677  LLNLKNCRNLKTLPKRIRLEK-LEILVLTGCSKLRTFPEIEEKMNCLAELYLGATSLSGL 735

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P S+  L  +  + L  C   ESLPS ++  K L +L++  C     LPD++G L  L+ 
Sbjct: 736  PASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEK 795

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSDNN---------------LQIIPESLNQLSSLV 553
            L    TAI  +P S+  L +L+ L L   N               + +  ++L+ L SL+
Sbjct: 796  LHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLI 855

Query: 554  SLKLSNNNLER--IPERLDPLSSLKYLDLFENNLDRIP---------------------E 590
             L LS+ ++    I   L  LSSLK L L  NN   IP                     E
Sbjct: 856  RLDLSDCDISDGGILRNLGFLSSLKVLLLDGNNFSNIPAASISRLTRLKSLALRGCGRLE 915

Query: 591  YLRSFPTSIPSEF----TSLRLSVD------------LRNCLKLDPNELSEIIKDGWMKQ 634
             L   P SI   +    TSL +S+D             RNC +L  N+    + D  +KQ
Sbjct: 916  SLPELPPSITGIYAHDCTSL-MSIDQLTKYPMLSDVSFRNCHQLVKNKQHTSMVDSLLKQ 974

Query: 635  SVNG-ETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGY--NKLMGFAFCVV 687
             +      +   +Y PG EIP+WF ++S G T S+    PT +      GF  CV+
Sbjct: 975  MLEALYMNVRFGLYVPGMEIPEWFTYKSWG-TQSMSVVLPTNWFTPTFRGFTVCVL 1029


>gi|168064075|ref|XP_001783991.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664498|gb|EDQ51216.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 527

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 165/543 (30%), Positives = 245/543 (45%), Gaps = 108/543 (19%)

Query: 124 LTETHSSIQYLNKLE------VLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           ++E+ S I +LNKL+        ++ +C  L SLP       L +L+            +
Sbjct: 25  ISESSSLISWLNKLDNYSSLTTCEIIKCSKLISLP-----NELGKLI-----------SL 68

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           TS +L   L      +  LP+ +  L+++  L +  C  L ++ + +  L  L S+ +  
Sbjct: 69  TSLNLSGFL-----NLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLTSLTSLYLSG 123

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C NL                                SLP+    F SLTSL + +C    
Sbjct: 124 CLNLT-------------------------------SLPNELGNFTSLTSLWLNECFKLT 152

Query: 298 RLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LP+ELGNL +L  L + G + +  LP  LG L  L+ L + +CS L  + +    L S+
Sbjct: 153 SLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLISLTSLNICDCSRLTSLPNEFGNLLSL 212

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
            ++++S C +L   P       +   +  + S  L L  CSKL S P++L    SLT+L+
Sbjct: 213 TTLDMSKCQSLAALPN------ELGNLTSLTS--LNLCDCSKLTSFPNALGNLSSLTTLD 264

Query: 417 IIDCKKLERLP------------------------DELGNLEALEELRVEGTG-IREVPK 451
           + +C+ LE LP                        +ELGNL +L  L + G   +  +P 
Sbjct: 265 VSECQSLESLPNELENLSSLTSLNLSGCWKLTSFLNELGNLTSLTSLNLSGYWKLTSLPN 324

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            L  L +L+ L L  CS+   LP+ L    SLTSL +  C     LP+E+GNL  L  L 
Sbjct: 325 ELGNLTSLTSLDLSGCSNLTLLPNELGKLISLTSLNLSGCWKLTSLPNELGNLTSLTSLN 384

Query: 511 IKGT-AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           + G   +  +P  LG L+SL  L LS+   L  +P  L  L+SL SL L   + L  +P 
Sbjct: 385 LSGCLNLTSLPNELGNLTSLTSLNLSECWKLTSLPNELGNLTSLTSLNLKRCSWLTSLPN 444

Query: 568 RLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNELS 624
            LD L+SL  LDL   +NL  +P  L           TSL  S+DL  C KL   PNEL 
Sbjct: 445 ELDNLTSLTSLDLSGCSNLTSLPNEL--------GNLTSLT-SLDLSECWKLTSLPNELG 495

Query: 625 EII 627
            +I
Sbjct: 496 NLI 498



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 228/490 (46%), Gaps = 66/490 (13%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           SK+  L +++  L+SL  ++L     LT LP+          +LG  +SLT  +      
Sbjct: 53  SKLISLPNELGKLISLTSLNLSGFLNLTSLPN----------ELGNLTSLTSLY------ 96

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
                  L  C +LTSLP  + +   L  L L GC NL                      
Sbjct: 97  -------LSGCSNLTSLPNELGNLTSLTSLYLSGCLNLT--------------------- 128

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
             LP+ +   +++  L +  C +L ++ + +  L  L S+ +  C NL  L     N+  
Sbjct: 129 -SLPNELGNFTSLTSLWLNECFKLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLIS 187

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL- 312
             S       L +  C R  SLP+      SLT+L++  C +   LP+ELGNL +L  L 
Sbjct: 188 LTS-------LNICDCSRLTSLPNEFGNLLSLTTLDMSKCQSLAALPNELGNLTSLTSLN 240

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           + D + +   P  LG L+ L+ L++  C  LE + + +  L S+ S+ +S C  L  F  
Sbjct: 241 LCDCSKLTSFPNALGNLSSLTTLDVSECQSLESLPNELENLSSLTSLNLSGCWKLTSFLN 300

Query: 373 IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
                 +   +  + S  L L+   KL SLP+ L    SLTSL++  C  L  LP+ELG 
Sbjct: 301 ------ELGNLTSLTS--LNLSGYWKLTSLPNELGNLTSLTSLDLSGCSNLTLLPNELGK 352

Query: 433 LEALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           L +L  L + G   +  +P  L  L +L+ L L  C +  SLP+ L    SLTSL + +C
Sbjct: 353 LISLTSLNLSGCWKLTSLPNELGNLTSLTSLNLSGCLNLTSLPNELGNLTSLTSLNLSEC 412

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQ 548
                LP+E+GNL  L  L +K  + +  +P  L  L+SL  L LS  +NL  +P  L  
Sbjct: 413 WKLTSLPNELGNLTSLTSLNLKRCSWLTSLPNELDNLTSLTSLDLSGCSNLTSLPNELGN 472

Query: 549 LSSLVSLKLS 558
           L+SL SL LS
Sbjct: 473 LTSLTSLDLS 482



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 178/376 (47%), Gaps = 26/376 (6%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
           K+T L +++ NL SL  + L     LT LP+ L    +L  L++  CS LT   +    L
Sbjct: 150 KLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLISLTSLNICDCSRLTSLPNEFGNL 209

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG- 192
             L  LD+ +C+SL +LP  + +   L  L L  CS L + P   +    S+L  L V  
Sbjct: 210 LSLTTLDMSKCQSLAALPNELGNLTSLTSLNLCDCSKLTSFPN--ALGNLSSLTTLDVSE 267

Query: 193 ---IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
              +E LP+ ++ LS++  L +  C +L +  + +  L  L S+ +     L  L     
Sbjct: 268 CQSLESLPNELENLSSLTSLNLSGCWKLTSFLNELGNLTSLTSLNLSGYWKLTSLPNELG 327

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           N+    S       L L  C     LP+      SLTSL +  C     LP+ELGNL +L
Sbjct: 328 NLTSLTS-------LDLSGCSNLTLLPNELGKLISLTSLNLSGCWKLTSLPNELGNLTSL 380

Query: 310 NRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
             L + G   +  LP  LG L  L+ L L  C +L  + + +  L S+ S+ +  CS L 
Sbjct: 381 TSLNLSGCLNLTSLPNELGNLTSLTSLNLSECWKLTSLPNELGNLTSLTSLNLKRCSWLT 440

Query: 369 GFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
             P           ++ + S + L L+ CS L SLP+ L    SLTSL++ +C KL  LP
Sbjct: 441 SLPN---------ELDNLTSLTSLDLSGCSNLTSLPNELGNLTSLTSLDLSECWKLTSLP 491

Query: 428 DELGNLEALEELRVEG 443
           +ELGNL  L   R+ G
Sbjct: 492 NELGNLIPLTRFRLLG 507



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 128/251 (50%), Gaps = 15/251 (5%)

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           I  +  + L++++ S L S  + L  + SLT+ EII C KL  LP+ELG L +L  L + 
Sbjct: 15  INFLSFTTLRISESSSLISWLNKLDNYSSLTTCEIIKCSKLISLPNELGKLISLTSLNLS 74

Query: 443 G-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
           G   +  +P  L  L +L+ L L  CS+  SLP+ L    SLTSL +  C N   LP+E+
Sbjct: 75  GFLNLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLTSLTSLYLSGCLNLTSLPNEL 134

Query: 501 GNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
           GN   L  L +     +  +P  LG L+SL  L LS  +NL  +P  L  L SL SL + 
Sbjct: 135 GNFTSLTSLWLNECFKLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLISLTSLNIC 194

Query: 559 N-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLK 617
           + + L  +P     L SL  LD+ +       + L + P  +    TSL  S++L +C K
Sbjct: 195 DCSRLTSLPNEFGNLLSLTTLDMSK------CQSLAALPNEL-GNLTSLT-SLNLCDCSK 246

Query: 618 LD--PNELSEI 626
           L   PN L  +
Sbjct: 247 LTSFPNALGNL 257


>gi|227438217|gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 185/342 (54%), Gaps = 33/342 (9%)

Query: 7    EIQINPYTFSKMTELRLLKF-----CGSKNK-CMVHSLEGVPFTELRYFEWHQFPLKTL- 59
            E+ I+P  F +M  L+LLKF      G  +K CM   L  +P   LRY  W  + LK+L 
Sbjct: 1936 ELCISPAIFERMYNLKLLKFYNNSTGGESSKICMPGGLVYLPM--LRYLHWQAYSLKSLP 1993

Query: 60   NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
            +      LV L +P S V  LW+  Q+L +L+R++L+  + L ++P+LS A +LE L+L 
Sbjct: 1994 SRFCTTYLVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPNLSKATSLEKLNLD 2053

Query: 120  YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
             C SL +   S+++LN L VL+L  CK L +LP +I+ + L+ L L GCS+L++ P ++ 
Sbjct: 2054 NCESLVDLTDSVRHLNNLGVLELSGCKKLKNLPNNINLRLLRTLHLEGCSSLEDFPFLSE 2113

Query: 180  CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
               + TL      IEE+P+SI+ LS +  L +  CK+L+N+  +I  +  L ++ +  CP
Sbjct: 2114 NVRKITLD--ETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLWLSNCP 2171

Query: 240  NLQFLEMPSCNID-----GTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLT 286
            N+        NI+     GT  +E P++         L +  C R ++LP      K+LT
Sbjct: 2172 NITLFPEVGDNIESLALKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPP---TLKNLT 2228

Query: 287  SLEII---DCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            +L+ +    C N    P+    L+AL+   ++GT+I E   G
Sbjct: 2229 NLKFLLLRGCTNITERPETACRLKALD---LNGTSIMEETSG 2267



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 137/275 (49%), Gaps = 22/275 (8%)

Query: 309  LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
            L  L +  +++  L  G   L  L ++ L+ C  L  + + + K  S+E + + NC +L 
Sbjct: 2001 LVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPN-LSKATSLEKLNLDNCESLV 2059

Query: 369  GFPE-IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
               + +   N  G         VL+L+ C KL++LP+++ + + L +L +  C  LE  P
Sbjct: 2060 DLTDSVRHLNNLG---------VLELSGCKKLKNLPNNINL-RLLRTLHLEGCSSLEDFP 2109

Query: 428  DELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
                N+    ++ ++ T I E+P S+ +L+ L  L L  C   ++LP  +    SLT+L 
Sbjct: 2110 FLSENVR---KITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLW 2166

Query: 487  IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPES 545
            + +C N    P+   N+E    L +KGTAI EVP ++G  S L +L +S    L+ +P +
Sbjct: 2167 LSNCPNITLFPEVGDNIE---SLALKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPT 2223

Query: 546  LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
            L  L++L  L L       I ER +    LK LDL
Sbjct: 2224 LKNLTNLKFLLL--RGCTNITERPETACRLKALDL 2256



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 154/329 (46%), Gaps = 33/329 (10%)

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
            +LK+LP          L L    +E L +  + L N+  + +  C+RL  + + + K   
Sbjct: 1988 SLKSLPSRFCTTYLVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPN-LSKATS 2046

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTS 287
            LE + +  C +L         +D T S    ++   L+L  C + ++LP+     + L +
Sbjct: 2047 LEKLNLDNCESL---------VDLTDSVRHLNNLGVLELSGCKKLKNLPN-NINLRLLRT 2096

Query: 288  LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
            L +  C + E  P    N++   ++ +D TAI E+P  + +L+ L  L L  C +L+ + 
Sbjct: 2097 LHLEGCSSLEDFPFLSENVR---KITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLP 2153

Query: 348  SSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV--------LKLNK 395
             +I  + S+ ++ +SNC N+  FPE    I    + G+ IE +P+++        L ++ 
Sbjct: 2154 RTIRNIDSLTTLWLSNCPNITLFPEVGDNIESLALKGTAIEEVPATIGDKSRLCYLNMSG 2213

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C +L++LP +L    +L  L +  C  +   P+    L+AL+   + GT I E      Q
Sbjct: 2214 CQRLKNLPPTLKNLTNLKFLLLRGCTNITERPETACRLKALD---LNGTSIMEETSGSVQ 2270

Query: 456  LALSKLKLKKCSSF--ESLPSRLYVSKSL 482
                 L + + + +  +S+  R+   +S+
Sbjct: 2271 SDDEPLDMPRLAQYILQSVKERIRHQRSM 2299



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 27/201 (13%)

Query: 399  LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA 457
            L+SLPS  C    L  L + +   +E L +   +L  L  + + G   + EVP      +
Sbjct: 1989 LKSLPSRFCT-TYLVELNLPN-SSVETLWNGTQDLGNLRRMNLRGCRRLLEVPNLSKATS 2046

Query: 458  LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG---- 513
            L KL L  C S   L   +    +L  LE+  CK    LP+ I NL  L+ L ++G    
Sbjct: 2047 LEKLNLDNCESLVDLTDSVRHLNNLGVLELSGCKKLKNLPNNI-NLRLLRTLHLEGCSSL 2105

Query: 514  -----------------TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL 555
                             TAI E+P S+ +LS L+ L LS    L+ +P ++  + SL +L
Sbjct: 2106 EDFPFLSENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTL 2165

Query: 556  KLSN-NNLERIPERLDPLSSL 575
             LSN  N+   PE  D + SL
Sbjct: 2166 WLSNCPNITLFPEVGDNIESL 2186


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 198/386 (51%), Gaps = 30/386 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+      F +MT LR LKF   +N  +    E +P  ELR+ +WH +P K+L N    +
Sbjct: 548 EVNFGGKAFMQMTRLRFLKF---RNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGD 603

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV LK+  S++ QLW   ++L  LK ++L +S+ L + PD S+  NLE L L  C+SL 
Sbjct: 604 QLVGLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLV 663

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM-TSCHLRS 184
           E + SI+ L KL +L+L  C++L +LP  I  + L+ LVL GCS L+  P++    +  +
Sbjct: 664 EINFSIENLGKLVLLNLKNCRNLKTLPKRIRLEKLEILVLTGCSKLRTFPEIEEKMNCLA 723

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    + ELP+S++ LS +G + +  CK LE++ SSIF+L+ L+++ +  C  L+  
Sbjct: 724 ELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLK-- 781

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF-------- 296
            +P         +E   +   +      +++PS   + K+L  L +  C           
Sbjct: 782 NLPDDLGLLVGLEELHCTHTAI------QTIPSSMSLLKNLKHLSLSGCNALSSQVSSSS 835

Query: 297 ---ERLPDELGNLQALNRLIIDGTAIRELPEG--LGQLALLSKLE--LKNCSELEYI-SS 348
              + +     NL  L  LI+   +   + +G  L  L  LS LE  + N +    I ++
Sbjct: 836 HGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGNNFSNIPAA 895

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIP 374
           SI +   ++ +++  C  L+  PE+P
Sbjct: 896 SISRFTRLKRLKLHGCGRLESLPELP 921



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 241/506 (47%), Gaps = 79/506 (15%)

Query: 226  KLQFLESIRIHRCPNLQFL--EMPSCNIDGTRSKEQPSS-------ELKLKKCPRPESLP 276
            +L+FL+    + C   +FL  E+   +  G  SK  P+S        LKLKK    +   
Sbjct: 561  RLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSRIIQLWK 620

Query: 277  S----GQCMFKSLT-SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP---EGLG 327
            +    G+  + +L+ S ++I  P+F   P+       L RL+++  T++ E+    E LG
Sbjct: 621  TSKDLGKLKYMNLSHSQKLIRTPDFSVTPN-------LERLVLEECTSLVEINFSIENLG 673

Query: 328  QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDG 380
            +L LL+   LKNC  L+ +   I +L+ +E + ++ CS L+ FPEI           +  
Sbjct: 674  KLVLLN---LKNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLGA 729

Query: 381  SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            + +  +P+SV        + L+ C  LESLPSS+   K L +L++  C KL+ LPD+LG 
Sbjct: 730  TSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGL 789

Query: 433  LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            L  LEEL    T I+ +P S++ L  L  L L  C++  S  S     +    +      
Sbjct: 790  LVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQKSMGV------ 843

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIP-ESLNQ 548
            NF  L      L  L +L +    I +  +  +LG LSSLE L+L+ NN   IP  S+++
Sbjct: 844  NFQNLS----GLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGNNFSNIPAASISR 899

Query: 549  LSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP--EYLRSFPTSIPSEFTS 605
             + L  LKL     LE +PE L P  S+K   +F N    +   + L  +P    + F  
Sbjct: 900  FTRLKRLKLHGCGRLESLPE-LPP--SIK--GIFANECTSLMSIDQLTKYPMLSDATF-- 952

Query: 606  LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG-ETYITKSMYFPGNEIPKWFRHQSTGS 664
                   RNC +L  N+    + D  +KQ +      +   +Y PG EIP+WF ++S G 
Sbjct: 953  -------RNCRQLVKNKQHTSMVDSLLKQMLEALYMNVRFCLYVPGMEIPEWFTYKSWG- 1004

Query: 665  TISLKTPQPTGY--NKLMGFAFCVVV 688
            T S+    PT +      GF  CV++
Sbjct: 1005 TQSMSVALPTNWFTPTFRGFTVCVIL 1030


>gi|168032885|ref|XP_001768948.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679860|gb|EDQ66302.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 542

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 261/562 (46%), Gaps = 61/562 (10%)

Query: 24  LKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGS-KVTQLWD 82
           +++C S       S   + FT LR  E          + +  +L +  + G   +T L +
Sbjct: 3   IQWCSSLTSLPNESGNLISFTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPN 62

Query: 83  DVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           ++ NL SL  +++     LT LP+ L    +L  L++ YCSSLT   + +  L  L  L+
Sbjct: 63  ELGNLTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLN 122

Query: 142 LDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSI 200
           ++ C SLT LP  + +   L  + +  CS+L +LP      L +   L  + I+   S  
Sbjct: 123 MECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPN----ELDNLTSLTYLNIQWYSS-- 176

Query: 201 KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQP 260
                    LI     L+N++S       L ++ I  C +L  L   S N+    +    
Sbjct: 177 ---------LISLPNELDNLTS-------LTTLNIQWCSSLTSLPNKSGNLISLTT---- 216

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAI 319
              L++ +C    SLP+      SLT+ +I  C +   LP+ELGNL +L  L I+  +++
Sbjct: 217 ---LRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTLNIEWCSSL 273

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------- 371
             LP  LG L +L+   +  CS L  +S+ +  LKS+ + +I  CS+L   P        
Sbjct: 274 ISLPSELGNLTVLTTFNIGRCSSLTSLSNELGNLKSLTTFDIGRCSSLTSLPNEFGNLTS 333

Query: 372 ----EIPFCNIDGSGIERIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               +I +C    S +  +P+        +   L + S L SLP+      SLT+ +I  
Sbjct: 334 LTTFDIQWC----SSLTSLPNELGNLTSLTTFDLRRWSSLTSLPNEFGNLTSLTTFDIQW 389

Query: 420 CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY 477
           C  L  LP+E GNL +L    + G + +  +P  L  L +L+ L ++  SS  SLP+ L 
Sbjct: 390 CSSLTSLPNESGNLTSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYYSSLTSLPNELG 449

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD 536
              SLT+L +  C +   LP+E+GNL  L ++ I   +++  +P  L  L SL    +  
Sbjct: 450 NLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSSLISLPNELDNLISLTTFDIGR 509

Query: 537 -NNLQIIPESLNQLSSLVSLKL 557
            ++L  +P  L  L+SL +  +
Sbjct: 510 CSSLTSLPNELGNLTSLTTFDI 531



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 235/490 (47%), Gaps = 32/490 (6%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           L++ +CSSLT   +    L     L ++ C SLTSLP  + +   L    ++GC +L +L
Sbjct: 1   LNIQWCSSLTSLPNESGNLISFTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSL 60

Query: 175 P-KMTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           P ++ +    +TL + G   +  LP+ +  L+++  L +  C  L ++ + +  L  L +
Sbjct: 61  PNELGNLTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTT 120

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + +  C +L  L     N+          + + +  C    SLP+      SLT L I  
Sbjct: 121 LNMECCSSLTLLPNELGNLTSL-------TIIDIGWCSSLTSLPNELDNLTSLTYLNIQW 173

Query: 293 CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
             +   LP+EL NL +L  L I   +++  LP   G L  L+ L +  CS L  + + + 
Sbjct: 174 YSSLISLPNELDNLTSLTTLNIQWCSSLTSLPNKSGNLISLTTLRMNECSSLTSLPNELG 233

Query: 352 KLKSVESIEISNCSNLKGFPE-------IPFCNIDG-SGIERIPS--------SVLKLNK 395
            L S+ + +I  C +L   P        +   NI+  S +  +PS        +   + +
Sbjct: 234 NLTSLTTFDIQGCLSLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLTVLTTFNIGR 293

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLA 454
           CS L SL + L   KSLT+ +I  C  L  LP+E GNL +L    ++  + +  +P  L 
Sbjct: 294 CSSLTSLSNELGNLKSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELG 353

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L +L+   L++ SS  SLP+      SLT+ +I  C +   LP+E GNL  L    + G
Sbjct: 354 NLTSLTTFDLRRWSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNESGNLTSLTTFDLSG 413

Query: 514 -TAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLD 570
            +++  +P  LG L+SL  L +   ++L  +P  L  L+SL +L +   ++L  +P  L 
Sbjct: 414 WSSLTSLPNELGNLTSLTTLNMEYYSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNELG 473

Query: 571 PLSSLKYLDL 580
            L+SL  +D+
Sbjct: 474 NLTSLTIIDI 483



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 229/491 (46%), Gaps = 66/491 (13%)

Query: 56  LKTLNILHWENLVSLKMPG----------------SKVTQLWDDVQNLVSLKRIDLKYSK 99
           L TLNI  W +L SL  P                 S +T L +++ NL SL  ++++   
Sbjct: 70  LTTLNIDGWSSLTSL--PNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCS 127

Query: 100 LLTKLPD-LSLAQNLEILDLGYCSSLT------ETHSSIQYLN----------------- 135
            LT LP+ L    +L I+D+G+CSSLT      +  +S+ YLN                 
Sbjct: 128 SLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTYLNIQWYSSLISLPNELDNL 187

Query: 136 -KLEVLDLDRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLG-V 191
             L  L++  C SLTSLP  S +   L  L +  CS+L +LP ++ +    +T  + G +
Sbjct: 188 TSLTTLNIQWCSSLTSLPNKSGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCL 247

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +  LP+ +  L+++  L I  C  L ++ S +  L  L +  I RC +L  L     N+
Sbjct: 248 SLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLTVLTTFNIGRCSSLTSLSNELGNL 307

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                  +  +   + +C    SLP+      SLT+ +I  C +   LP+ELGNL +L  
Sbjct: 308 -------KSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELGNLTSLTT 360

Query: 312 LIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
             +   +++  LP   G L  L+  +++ CS L  + +    L S+ + ++S  S+L   
Sbjct: 361 FDLRRWSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNESGNLTSLTTFDLSGWSSLTSL 420

Query: 371 PEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
           P           +  + S + L +   S L SLP+ L    SLT+L +  C  L  LP+E
Sbjct: 421 PN---------ELGNLTSLTTLNMEYYSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNE 471

Query: 430 LGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           LGNL +L  + +   + +  +P  L  L +L+   + +CSS  SLP+ L    SLT+ +I
Sbjct: 472 LGNLTSLTIIDIGWCSSLISLPNELDNLISLTTFDIGRCSSLTSLPNELGNLTSLTTFDI 531

Query: 488 IDCKNFMRLPD 498
             C +    P+
Sbjct: 532 GRCSSLTSFPN 542



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 147/279 (52%), Gaps = 27/279 (9%)

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + I  CS+L   P       + SG   I  + L++N+CS L SLP+ L    SLT+ +I 
Sbjct: 1   LNIQWCSSLTSLP-------NESG-NLISFTTLRMNECSSLTSLPNELGNLTSLTTFDIQ 52

Query: 419 DCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
            C  L  LP+ELGNL +L  L ++G + +  +P  L  L +L+ L ++ CSS  SLP+ L
Sbjct: 53  GCLSLTSLPNELGNLTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNEL 112

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL-VL 534
               SLT+L +  C +   LP+E+GNL  L ++ I   +++  +P  L  L+SL +L + 
Sbjct: 113 GNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTYLNIQ 172

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
             ++L  +P  L+ L+SL +L +   ++L  +P +   L SL  L + E           
Sbjct: 173 WYSSLISLPNELDNLTSLTTLNIQWCSSLTSLPNKSGNLISLTTLRMNE----------C 222

Query: 594 SFPTSIPSEFTSLR--LSVDLRNCLKLD--PNELSEIIK 628
           S  TS+P+E  +L    + D++ CL L   PNEL  +  
Sbjct: 223 SSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTS 261


>gi|296081002|emb|CBI18506.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 232/480 (48%), Gaps = 61/480 (12%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIP 387
           L +L L+ C+    +  SI  L  +  + + NC  L+ FP    E+PF     +G+    
Sbjct: 103 LERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPRSINELPFSIGYLTGL---- 158

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
             +L L  C +L+SLPSS+C  KSL +L +  C KLE  P+ + N+E L++L ++GT ++
Sbjct: 159 -ILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALK 217

Query: 448 EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
           ++  S+  L  L  L L+ C +  +LP  +   KSL +L +  C    +LP+ +G+L+ L
Sbjct: 218 QLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCL 277

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
             L   GT +R+ P S+  L +LE L    NN   +P  +++LS L  L L++  +L +I
Sbjct: 278 VKLQADGTLVRQPPSSIVLLRNLEIL----NNFFSLPAGISKLSKLRFLSLNHCKSLLQI 333

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR-LSVDLRNCLKLDP-NEL 623
           PE   P S ++    + ++L+ I       P+S+ +     R L   L NC  LD  N  
Sbjct: 334 PEL--PSSIIEVNAQYCSSLNTILT-----PSSVCNNQPVCRWLVFTLPNCFNLDAENPC 386

Query: 624 SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFA 683
           S  +     +  +N       S++ PG+EIP W  +Q+ GS ++++ P     +  +GFA
Sbjct: 387 SNDMAIISPRMQINFLPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPPHWFESNFLGFA 446

Query: 684 FCVVVA--------CSVSECCRHESVEDDRKC---NLFDVVCDRRSEGYDSYTSSYLGKI 732
            C V A        CS    C+ +S E   +     L  + C+  SE             
Sbjct: 447 VCCVFAFEDIAPNGCSSQLLCQLQSDESHFRGIGHILHSIDCEGNSE------------- 493

Query: 733 SHVESDHVFLGSS------IFAGE--NSCKRSDEFFFHIDRSCCE---VKKCGIHFVHAQ 781
             ++S H++L         I  G+  N  + +   F  I  SCC    V+KCGIH ++AQ
Sbjct: 494 DRLKSHHMWLAYKPRGRLRISYGDCPNRWRHAKASFGFI--SCCPSNMVRKCGIHLIYAQ 551



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 192/417 (46%), Gaps = 83/417 (19%)

Query: 18  MTELRLLK---FCGSKNKCMVHSLE---GVPFTELRYFEWHQFPLKTL-NILHWENLVSL 70
           M  LRLLK   F G   +     L      P  ELRY  WH +P  +L +  H ENL+ L
Sbjct: 1   MNRLRLLKVFNFSGIGKEGYKEPLSVSFEFPSYELRYLYWHGYPFGSLPSKFHSENLIEL 60

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSS 130
            M  S + +LW   + L +L  I+L  S+ L  LP+ S   NLE L L  C+S  E   S
Sbjct: 61  NMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGCTSFLEVDPS 120

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
           I+ LNKL  L+L  CK L S P SI+                                  
Sbjct: 121 IEVLNKLIFLNLKNCKKLRSFPRSIN---------------------------------- 146

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL------ 244
               ELP SI  L+ +  L + +CKRL+++ SSI KL+ LE++ +  C  L+        
Sbjct: 147 ----ELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMEN 202

Query: 245 --EMPSCNIDGTRSKE-QPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
              +    +DGT  K+  PS E       L L+ C    +LP      KSL +L +  C 
Sbjct: 203 MEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCS 262

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
             ++LP+ LG+LQ L +L  DGT +R+ P     + LL  LE+ N      + + I KL 
Sbjct: 263 KLQQLPENLGSLQCLVKLQADGTLVRQPPS---SIVLLRNLEILN--NFFSLPAGISKLS 317

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK--CSKLESL--PSSLC 407
            +  + +++C +L   PE             +PSS++++N   CS L ++  PSS+C
Sbjct: 318 KLRFLSLNHCKSLLQIPE-------------LPSSIIEVNAQYCSSLNTILTPSSVC 361



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 57/335 (17%)

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LP    ++NL  L++ Y S + E     + L+ L  ++L   + L  LP       L+RL
Sbjct: 48  LPSKFHSENLIELNMCY-SYMRELWKGNEVLDNLNTIELSNSQHLIHLPNFSSMPNLERL 106

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           VL GC++                        E+  SI+ L+ +  L + +CK+L +   S
Sbjct: 107 VLEGCTSFL----------------------EVDPSIEVLNKLIFLNLKNCKKLRSFPRS 144

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           I +L F     I     L  L+                    L+ C R +SLPS  C  K
Sbjct: 145 INELPF----SIGYLTGLILLD--------------------LENCKRLKSLPSSICKLK 180

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL +L +  C   E  P+ + N++ L +L++DGTA+++L   +  L  L  L L++C  L
Sbjct: 181 SLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNL 240

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC 396
             +  SI  LKS+E++ +S CS L+  PE       +     DG+ + + PSS++ L   
Sbjct: 241 ATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNL 300

Query: 397 SKLE---SLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             L    SLP+ +     L  L +  CK L ++P+
Sbjct: 301 EILNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPE 335


>gi|5302807|emb|CAB46048.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268446|emb|CAB80966.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1317

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 218/449 (48%), Gaps = 65/449 (14%)

Query: 35   VHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
            V   +G+ +  ++LR   W+  PLK L+     E LV L+M  S + +LWD  Q L  LK
Sbjct: 700  VEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 759

Query: 92   RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
            ++ L+ SK L ++PDLSLA NLE +D+  C SL    SS+Q   KL  LD+  CK L S 
Sbjct: 760  QMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESF 819

Query: 152  PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
            PT ++ + L+ L L GC NL+N P +           +G    + P          E+++
Sbjct: 820  PTDLNLESLEYLNLTGCPNLRNFPAIK----------MGCSDVDFPEGRN------EIVV 863

Query: 212  YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCP 270
              C   +N+ +    L +L+   + RC   +F               +P   + L  +C 
Sbjct: 864  EDCFWNKNLPAG---LDYLDC--LMRCMPCEF---------------RPEYLVFLNVRCY 903

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
            + E L  G     SL  +++ +  N   +PD L     L  L ++   ++  LP  +G L
Sbjct: 904  KHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCKSLVTLPSTIGNL 962

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIER 385
              L +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  ++ + IE 
Sbjct: 963  QKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEE 1021

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
            I    L L+K +KLESL              + +CK L  LP  +GNL+ L  L ++  T
Sbjct: 1022 I----LDLSKATKLESLI-------------LNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1064

Query: 445  GIREVPKSLAQLALSKLKLKKCSSFESLP 473
            G+  +P  +   +L  L L  CSS  + P
Sbjct: 1065 GLEVLPTDVNLSSLGILDLSGCSSLRTFP 1093



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 170/616 (27%), Positives = 274/616 (44%), Gaps = 72/616 (11%)

Query: 10   INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLV 68
            I+  +F  M  L+ LK     +     SL  +P  +LR  +W   PLK+L +    E LV
Sbjct: 541  IDKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPL-KLRLLDWDDCPLKSLPSTFKAEYLV 599

Query: 69   SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            +L M  SK+ +LW+    L SLK+++L  SK L ++PDLS A+NLE LDL  C SL    
Sbjct: 600  NLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLP 659

Query: 129  SSIQYLNK----------------------LEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
            SSIQ   K                      LE L +D C  +      ++     RL+L 
Sbjct: 660  SSIQNAIKLRKLHCSGVILIDLKSLEGMCNLEYLSVD-CSRVEGTQGIVYFPSKLRLLLW 718

Query: 167  GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
                LK L           L +    +E+L    + L  + ++ +   K L+ I      
Sbjct: 719  NNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLA 778

Query: 227  LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
            +  LE + I +C +L  +  PS   +  +        L +  C + ES P+     +SL 
Sbjct: 779  IN-LEEVDICKCESL--VTFPSSMQNAIK-----LIYLDISDCKKLESFPT-DLNLESLE 829

Query: 287  SLEIIDCPNFERLP------DELGNLQALNRLII-DGTAIRELPEGLGQLALLSK---LE 336
             L +  CPN    P       ++   +  N +++ D    + LP GL  L  L +    E
Sbjct: 830  YLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCE 889

Query: 337  LK---------NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIP 387
             +          C + E +   I  L S+E +++S   NL   P++       + ++   
Sbjct: 890  FRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPDLS----KATNLKH-- 943

Query: 388  SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGI 446
               L LN C  L +LPS++   + L  LE+ +C  LE LP ++ NL +LE L + G + +
Sbjct: 944  ---LYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSL 999

Query: 447  REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            R  P  L   ++  L L+  +  E L   L  +  L SL + +CK+ + LP  IGNL+ L
Sbjct: 1000 RTFP--LISKSIKWLYLENTAIEEILD--LSKATKLESLILNNCKSLVTLPSTIGNLQNL 1055

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERI 565
            + L +K     EV  +   LSSL  L LS  ++L+  P      +++V L L N  +  +
Sbjct: 1056 RRLYMKRCTGLEVLPTDVNLSSLGILDLSGCSSLRTFPLI---STNIVWLYLENTAIGEV 1112

Query: 566  PERLDPLSSLKYLDLF 581
            P  ++  + L+ L ++
Sbjct: 1113 PCCIEDFTRLRVLLMY 1128


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 241/499 (48%), Gaps = 60/499 (12%)

Query: 8    IQINPYTFSKMTELRLLKFCGSKN-----KCMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
              I+   F  M+ L+ L+     N      C+ H L  +   +LR  +W  FP+    + 
Sbjct: 589  FNISEKAFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYIS-RKLRLLDWMYFPMTCFPSK 647

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
             + E LV L M GSK+ +LW+++Q L +LKR+DL  SK L +LPDLS A NLE+L+L  C
Sbjct: 648  FNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLNGC 707

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SSL E   SI    KL  L+L  C SL  LP+SI              N  NL  +   H
Sbjct: 708  SSLVELPFSIGNATKLLKLELSGCSSLLELPSSI-------------GNAINLQTIDFSH 754

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
              + +        ELPSSI   +N+ EL +  C  L+ + SSI     L+ + +  C +L
Sbjct: 755  CENLV--------ELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSL 806

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
            +  E+PS   + T  K     EL L  C     LPS      +L  L +  C +   LP 
Sbjct: 807  K--ELPSSIGNCTNLK-----ELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPS 859

Query: 302  ELG---NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
             +G   NL+ LN   +  + + ELP  +G L  LS+L L+ C +L+ + ++I  L+ +  
Sbjct: 860  FIGKATNLKILNLGYL--SCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NLEFLNE 916

Query: 359  IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
            +++++C  LK FP I       + I+R+        + +++E +PSSL  +  L  L+++
Sbjct: 917  LDLTDCILLKTFPVI------STNIKRLHL------RGTQIEEVPSSLRSWPRLEDLQML 964

Query: 419  DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
              + L      L  +  LE   +    IRE+   L ++  L +LKL  C    SLP    
Sbjct: 965  YSENLSEFSHVLERITVLE---LSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQ--- 1018

Query: 478  VSKSLTSLEIIDCKNFMRL 496
            +S SL  L+  +C +  RL
Sbjct: 1019 LSDSLIILDAENCGSLERL 1037



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 246/561 (43%), Gaps = 104/561 (18%)

Query: 282  FKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
             ++L  +++    N + LPD     NL+ LN   ++G +++ ELP  +G    L KLEL 
Sbjct: 673  LRNLKRMDLFSSKNLKELPDLSSATNLEVLN---LNGCSSLVELPFSIGNATKLLKLELS 729

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFP------------EIPFCNIDGSGIERI 386
             CS L  + SSI    ++++I+ S+C NL   P            ++  C    S ++ +
Sbjct: 730  GCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCC----SSLKEL 785

Query: 387  PSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
            PSS+        L L  CS L+ LPSS+    +L  L +  C  L +LP  +GN   LE+
Sbjct: 786  PSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEK 845

Query: 439  LRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            L + G   + E+P  + +   L  L L   S    LPS +     L+ L +  CK    L
Sbjct: 846  LILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVL 905

Query: 497  PDEIGNLEYL---------------------KVLTIKGTAIREVPESLGQLSSLEWL-VL 534
            P  I NLE+L                     K L ++GT I EVP SL     LE L +L
Sbjct: 906  PTNI-NLEFLNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSLRSWPRLEDLQML 964

Query: 535  SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLR 593
               NL    E  + L  +  L+LS+ N+  +   L+ ++ L+ L L     L  +P+   
Sbjct: 965  YSENLS---EFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSD 1021

Query: 594  SFPTSIPSEFTSL-RLS----------VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            S          SL RL           +D  NCLKLD      II+      S+      
Sbjct: 1022 SLIILDAENCGSLERLGCSFNNPNIKCLDFTNCLKLDKEARDLIIQATARHYSI------ 1075

Query: 643  TKSMYFPGNEIPKWFRHQSTGSTISLKTPQ---PTGYNKLMGFAFCVVVACSVSECCRHE 699
                  P  E+ ++  +++ GS++++K  Q   PT     M F  C+V+A +      +E
Sbjct: 1076 -----LPSREVHEYITNRAIGSSLTVKLNQRALPTS----MRFKACIVLADNGGREAGNE 1126

Query: 700  SVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGE---NSCKRS 756
                  +  ++  + +R++   D  TS+Y+  ++H+  +  FL   ++  E   +    S
Sbjct: 1127 G-----RMEVYMTIMERQN---DFITSTYVS-LNHIFPE--FLREHMYTVEVLVDVEVTS 1175

Query: 757  DE--FFFHIDRSCCEVKKCGI 775
            DE  F F ++    E+ +CG+
Sbjct: 1176 DELVFDFQLNSEKWEIGECGV 1196


>gi|15236505|ref|NP_192585.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5791483|emb|CAB53527.1| putative protein [Arabidopsis thaliana]
 gi|7267486|emb|CAB77970.1| putative protein [Arabidopsis thaliana]
 gi|332657243|gb|AEE82643.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1234

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 189/386 (48%), Gaps = 39/386 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC-------MVHSLEGVPFTELRYFEWHQFPLKTL 59
           E+ +    F KM  LR LK   + N         +      +P T LR   W +FP++ +
Sbjct: 544 ELHLQVDAFKKMLNLRFLKLYTNTNISEKEDKLLLPKEFNYLPNT-LRLLSWQRFPMRCM 602

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            +    + LV L MPGSK+ +LWD V  L  LK ++L  S+ L + P+LSLA NLE L L
Sbjct: 603 PSDFFPKYLVKLLMPGSKLEKLWDGVMPLQCLKNMNLFGSENLKEFPNLSLATNLETLSL 662

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
           G+C SL E  S+I  LNKL  L++  C +L   P  ++ K L  LVL GCS LK  P ++
Sbjct: 663 GFCLSLVEVPSTIGNLNKLTYLNMSGCHNLEKFPADVNLKSLSDLVLNGCSRLKIFPAIS 722

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE-----NISSSIFKLQFLESI 233
           S    S L L  + +EE PS++  L N+  LLI+    ++      + +S+  +   +S 
Sbjct: 723 SN--ISELCLNSLAVEEFPSNLH-LENLVYLLIWGMTSVKLWDGVKVLTSLKTMHLRDSK 779

Query: 234 RIHRCP------NLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQ 279
            +   P      NL  L +  C        E PSS        EL +  C   E+ P+G 
Sbjct: 780 NLKEIPDLSMASNLLILNLEQC----ISIVELPSSIRNLHNLIELDMSGCTNLETFPTG- 834

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              +SL  + +  C   +  PD   N+  L+   +  TAI E+P  +   + L  L +  
Sbjct: 835 INLQSLKRINLARCSRLKIFPDISTNISELD---LSQTAIEEVPLWIENFSKLKYLIMGK 891

Query: 340 CSELEYISSSIFKLKSVESIEISNCS 365
           C+ LEY+  +I KLK ++S++ S+C 
Sbjct: 892 CNMLEYVFLNISKLKHLKSVDFSDCG 917



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 165/388 (42%), Gaps = 59/388 (15%)

Query: 318  AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--- 374
            ++ E+P  +G L  L+ L +  C  LE   + +  LKS+  + ++ CS LK FP I    
Sbjct: 667  SLVEVPSTIGNLNKLTYLNMSGCHNLEKFPADV-NLKSLSDLVLNGCSRLKIFPAISSNI 725

Query: 375  --FCNIDGSGIERIPSSVLKLNKCSKL------ESLPSSLCMFKSLTSLEIIDCKKLERL 426
               C ++   +E  PS++   N    L        L   + +  SL ++ + D K L+ +
Sbjct: 726  SELC-LNSLAVEEFPSNLHLENLVYLLIWGMTSVKLWDGVKVLTSLKTMHLRDSKNLKEI 784

Query: 427  PDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD L     L  L +E    I E+P S+  L  L +L +  C++ E+ P+ + + +SL  
Sbjct: 785  PD-LSMASNLLILNLEQCISIVELPSSIRNLHNLIELDMSGCTNLETFPTGINL-QSLKR 842

Query: 485  LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
            + +  C      PD   N+  L    +  TAI EVP  +   S L++L++   N L+ + 
Sbjct: 843  INLARCSRLKIFPDISTNISELD---LSQTAIEEVPLWIENFSKLKYLIMGKCNMLEYVF 899

Query: 544  ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEF 603
             ++++L  L S+  S+  +                      L +   Y+   P    S  
Sbjct: 900  LNISKLKHLKSVDFSDCGI----------------------LSKADMYMLQVPNEASSSL 937

Query: 604  T---SLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
                  +  +   NC KL+             ++++  + +  K M  PG E+P +F HQ
Sbjct: 938  PINCVQKAELIFINCYKLN-------------QKALIRQQFFLKKMILPGEEVPFYFTHQ 984

Query: 661  STGSTISLKTPQPTGYNKLMGFAFCVVV 688
            + GS+I +         +   F  CVVV
Sbjct: 985  TIGSSIGIPLLHILLSQQYFRFKACVVV 1012


>gi|147771827|emb|CAN62507.1| hypothetical protein VITISV_028498 [Vitis vinifera]
          Length = 587

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 168/556 (30%), Positives = 254/556 (45%), Gaps = 86/556 (15%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            K+L  L    C   ++ P+  GN++ L  L +  TAI ELP  +G L  L  L+LK C 
Sbjct: 1   MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 60

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV---- 390
            L+ +S+SI KLKS+E++ +S CS L+ FPE+           +DG+ IE +PSS+    
Sbjct: 61  NLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLK 120

Query: 391 ----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
               L L KC  L SL + +C   SL +L +  C +L  LP  LG+L+ L +L  +GT I
Sbjct: 121 GLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAI 180

Query: 447 REVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN----FMRLPDEIG 501
            + P S+  L  L  L    C      P+ L    SL S  ++   +     +RLP    
Sbjct: 181 TQPPDSIVLLRNLQVLIYPGCKILA--PTSL---GSLFSFWLLHGNSSNGIGLRLPSSFS 235

Query: 502 NLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
           +   L  L I    + E  +P  +  L SL+ L LS NN   IP  +++L++L  L+L  
Sbjct: 236 SFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQ 295

Query: 560 -NNLERIPERLDPLSSLKYLDLFE-----------NNLDRIPEYLRSFPTSIPSEFTSLR 607
             +L  IPE L P  S++ +D              N L  + ++L  +  S P E  S  
Sbjct: 296 CQSLTGIPE-LPP--SVRDIDAHNCTALLPGSSSVNTLQGL-QFLF-YNCSKPVEDQS-- 348

Query: 608 LSVDLRNCLKLDPN-------ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
            S D R  L++ P+         S +     M Q +     I  S+ FPG  IP+W  HQ
Sbjct: 349 -SDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKL--LENIAFSIVFPGTGIPEWIWHQ 405

Query: 661 STGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV---CDRR 717
           + GS+I ++ P     +  +GFA C V+          E + +   C+L   V    D +
Sbjct: 406 NVGSSIKIQLPTDWHSDDFLGFALCSVL----------EHLPERIICHLNSDVFNYGDLK 455

Query: 718 SEGYDSYTSSYLGKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFHIDR---- 765
             G+D +   + G I  V S+HV+LG           F   N     +  F    R    
Sbjct: 456 DFGHDFH---WTGNI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSS 510

Query: 766 SCCEVKKCGIHFVHAQ 781
           +   VKKCG+  ++A+
Sbjct: 511 ASNVVKKCGVCLIYAE 526



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 171/372 (45%), Gaps = 57/372 (15%)

Query: 158 KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCK 215
           K L+ L   GCS LK  P +   ++ + L L      IEELPSSI  L+ +  L +  CK
Sbjct: 2   KALEILNFSGCSGLKKFPNIQG-NMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 60

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSS----- 262
            L+++S+SI KL+ LE++ +  C  L+       N        +DGT  +  PSS     
Sbjct: 61  NLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLK 120

Query: 263 ---ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
               L L+KC    SL +G C   SL +L +  C     LP  LG+LQ L +L  DGTAI
Sbjct: 121 GLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAI 180

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
            + P+        S + L+N   L Y    I    S+ S        L  F  +   + +
Sbjct: 181 TQPPD--------SIVLLRNLQVLIYPGCKILAPTSLGS--------LFSFWLLHGNSSN 224

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEE 438
           G G+                  LPSS   F+SL++L+I DCK +E  +P+ + +L +L++
Sbjct: 225 GIGLR-----------------LPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKK 267

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           L +       +P  +++L  L  L+L +C S   +P    +  S+  ++  +C   +   
Sbjct: 268 LDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPE---LPPSVRDIDAHNCTALLPGS 324

Query: 498 DEIGNLEYLKVL 509
             +  L+ L+ L
Sbjct: 325 SSVNTLQGLQFL 336



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 145/343 (42%), Gaps = 61/343 (17%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           +K L IL++     LK    K   +  +++NL+ L        +L + +  L+    L +
Sbjct: 1   MKALEILNFSGCSGLK----KFPNIQGNMENLLELYLASTAIEELPSSIGHLT---GLVL 53

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           LDL +C +L    +SI  L  LE L L  C  L S P           V+    NLK   
Sbjct: 54  LDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPE----------VMENMDNLKE-- 101

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
                     L L G  IE LPSSI+ L  +  L +  CK L ++S+ +  L  LE++ +
Sbjct: 102 ----------LLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIV 151

Query: 236 HRCPNLQFL--------EMPSCNIDGTRSKEQPSSELKLK----------KCPRPESLPS 277
             C  L  L         +   + DGT   + P S + L+          K   P SL  
Sbjct: 152 SGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSL-- 209

Query: 278 GQCMFKSLTSLEIIDCPNFE----RLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLAL 331
                 SL S  ++   +      RLP    + ++L+ L I    + E  +P G+  L  
Sbjct: 210 -----GSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLIS 264

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           L KL+L   + L  I + I +L +++ + +  C +L G PE+P
Sbjct: 265 LKKLDLSRNNFLS-IPAGISELTNLKDLRLGQCQSLTGIPELP 306


>gi|2853079|emb|CAA16929.1| resistance protein RPP5-like [Arabidopsis thaliana]
 gi|7268748|emb|CAB78954.1| resistance protein RPP5-like [Arabidopsis thaliana]
          Length = 1715

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 204/797 (25%), Positives = 322/797 (40%), Gaps = 151/797 (18%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            ELR   W  +PL +      ++ LV L MP SK+ +LW   +NL  LKRI L  S  L  
Sbjct: 534  ELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVLKRITLSCSVQLLN 593

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            + +L  + N+E +DL  C  L     + Q L  L ++DL  CK + S P           
Sbjct: 594  VDELQYSPNIEKIDLKGCLELQSFPDTGQ-LQHLRIVDLSTCKKIKSFP----------- 641

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
                    K  P +   HL+      G GI +L SS+   S    L     ++LEN+SSS
Sbjct: 642  --------KVPPSIRKLHLQ------GTGIRDL-SSLNHSSESQRL----TRKLENVSSS 682

Query: 224  IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                                            +++     LKLK      SLP    +F+
Sbjct: 683  --------------------------------NQDHRKQVLKLKDSSHLGSLPD-IVIFE 709

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL-GQLALLSKLELKNCSE 342
            SL  L+   C   E   D  G  Q L RL +  TAI+E+P  L   ++ L KL+++NC  
Sbjct: 710  SLEVLDFSGCSELE---DIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCER 766

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLK------ 392
            L  +   +  +K +  +++S CSNL+   E+P       + G+ ++  PS++L+      
Sbjct: 767  LRDLPMGMSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPSTLLETLSEVV 826

Query: 393  ---LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
               L  C KL+ LP+ +   + L  L++  C KLE + D   N   L EL + GT IRE+
Sbjct: 827  LLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKLEIIVDLPLN---LIELYLAGTAIREL 883

Query: 450  PKSLA-QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P S+     L  L LK C+    LP  ++   +L  L+++D  N          LE    
Sbjct: 884  PPSIGDLALLDTLDLKNCNRLRHLPMEMH---NLNPLKVLDLSN-------CSELEVFTS 933

Query: 509  LTIKGTAIREVPESLGQLSSLEW-----------LVLSDNNLQIIPESLNQLSSLVSLKL 557
               K   +R  P  +   S L +           L L    LQ IPE +  + SL +L L
Sbjct: 934  SLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSLYKARLQYIPEEIRWMPSLKTLDL 993

Query: 558  SNNNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFP----------TSIPSEFTSL 606
            S N    +P  +   S L  L L +  NL  +P+  RS              I  +F  L
Sbjct: 994  SRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNAHGCSSLQLITPDFKQL 1053

Query: 607  RLSVDLRNCLKLDPNELSEIIKDGWM-------KQSVNGETYITKSMYFPGNEIPKWFRH 659
                   NC  L  + +SE++ +          +Q +      +  +  P +   K +  
Sbjct: 1054 PRYYTFSNCFGLPSHMVSEVLANAPAIVECRKPQQGLENALACSFCLPSPTSRDSKLYLQ 1113

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSE 719
              + + I L    P   + L+GFA  V V+ S      H++     + N       +R  
Sbjct: 1114 PGSSTMIIL---NPKTRSTLVGFAILVEVSFSKD---FHDTAGLGFRWNDKKGHAHKRDN 1167

Query: 720  GYDSYTSSYLGKISHVESDHVFL-------GSSIFAGENSCKRSDEFFF----------H 762
             +  +    +  +  +  DH+F+        S +F G+     +D   F          H
Sbjct: 1168 IFHCWAPGEV--VPKINDDHMFVFFDLKMHPSILFEGDVFGILADLVVFEIFPVNKQEMH 1225

Query: 763  IDRSCCEVKKCGIHFVH 779
            +  SC  + KCG++ ++
Sbjct: 1226 VGDSCT-ITKCGVYVIN 1241


>gi|147787197|emb|CAN64645.1| hypothetical protein VITISV_042806 [Vitis vinifera]
          Length = 754

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 168/556 (30%), Positives = 254/556 (45%), Gaps = 86/556 (15%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            K+L  L    C   ++ P+  GN++ L  L +  TAI ELP  +G L  L  L+LK C 
Sbjct: 168 MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 227

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV---- 390
            L+ +S+SI KLKS+E++ +S CS L+ FPE+           +DG+ IE +PSS+    
Sbjct: 228 NLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLK 287

Query: 391 ----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
               L L KC  L SL + +C   SL +L +  C +L  LP  LG+L+ L +L  +GT I
Sbjct: 288 GLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAI 347

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN----FMRLPDEIG 501
            + P S+  L  L  L    C      P+ L    SL S  ++   +     +RLP    
Sbjct: 348 AQPPDSIVLLRNLQVLIYPGCKILA--PTSL---GSLFSFWLLHGNSSNGIGLRLPSSFS 402

Query: 502 NLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
           +   L  L I    + E  +P  +  L SL+ L LS NN   IP  +++L++L  L+L  
Sbjct: 403 SFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQ 462

Query: 560 -NNLERIPERLDPLSSLKYLDLFE-----------NNLDRIPEYLRSFPTSIPSEFTSLR 607
             +L  IPE L P  S++ +D              N L  + ++L  +  S P E  S  
Sbjct: 463 CQSLTGIPE-LPP--SVRDIDAHNCTALLPGSSSVNTLQGL-QFLF-YNCSKPVEDQS-- 515

Query: 608 LSVDLRNCLKLDPNEL-------SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
            S D R  L++ P+         S +     M Q +     I  S+ FPG  IP+W  HQ
Sbjct: 516 -SDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKL--LENIAFSIVFPGTGIPEWIWHQ 572

Query: 661 STGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV---CDRR 717
           + GS+I ++ P     +  +GFA C V+          E + +   C+L   V    D +
Sbjct: 573 NVGSSIKIQLPTDWXSDXFLGFALCSVL----------EHLPERIICHLNSDVFNYGDLK 622

Query: 718 SEGYDSYTSSYLGKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFHIDR---- 765
             G+D +   + G I  V S+HV+LG           F   N     +  F    R    
Sbjct: 623 DFGHDFH---WTGNI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSX 677

Query: 766 SCCEVKKCGIHFVHAQ 781
           +   VKKCG+  ++A+
Sbjct: 678 TSNVVKKCGVCLIYAE 693



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 173/383 (45%), Gaps = 59/383 (15%)

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSN 205
           L   P+ I  K L+ L   GCS LK  P +   ++ + L L      IEELPSSI  L+ 
Sbjct: 159 LICFPSIIDMKALEILNFSGCSGLKKFPNIQG-NMENLLELYLASTAIEELPSSIGHLTG 217

Query: 206 IGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN--------IDGTRSK 257
           +  L +  CK L+++S+SI KL+ LE++ +  C  L+       N        +DGT  +
Sbjct: 218 LVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIE 277

Query: 258 EQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
             PSS         L L+KC    SL +G C   SL +L +  C     LP  LG+LQ L
Sbjct: 278 VLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRL 337

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS-SSIFKLKSVESIEISNCSNLK 368
            +L  DGTAI + P+ +  L  L  L    C  L   S  S+F    +      N SN  
Sbjct: 338 AQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLLH----GNSSN-- 391

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLP 427
                      G G+                  LPSS   F+SL++L+I DCK +E  +P
Sbjct: 392 -----------GIGLR-----------------LPSSFSSFRSLSNLDISDCKLIEGAIP 423

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           + + +L +L++L +       +P  +++L  L  L+L +C S   +P    +  S+  ++
Sbjct: 424 NGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPE---LPPSVRDID 480

Query: 487 IIDCKNFMRLPDEIGNLEYLKVL 509
             +C   +     +  L+ L+ L
Sbjct: 481 AHNCTALLPGSSSVNTLQGLQFL 503



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 162/389 (41%), Gaps = 63/389 (16%)

Query: 8   IQINPYTFSKMTELRLLK-FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWEN 66
           I I+   F+ M  LRLLK +   ++  M    + + F  +         +K L IL++  
Sbjct: 126 IHISTEAFAMMKNLRLLKIYWDLESAFMREDNKLICFPSI-------IDMKALEILNFSG 178

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
              LK    K   +  +++NL+ L        +L + +  L+    L +LDL +C +L  
Sbjct: 179 CSGLK----KFPNIQGNMENLLELYLASTAIEELPSSIGHLT---GLVLLDLKWCKNLKS 231

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTL 186
             +SI  L  LE L L  C  L S P           V+    NLK             L
Sbjct: 232 LSTSICKLKSLENLSLSGCSKLESFPE----------VMENMDNLKE------------L 269

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-- 244
            L G  IE LPSSI+ L  +  L +  CK L ++S+ +  L  LE++ +  C  L  L  
Sbjct: 270 LLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPR 329

Query: 245 ------EMPSCNIDGTRSKEQPSSELKLK----------KCPRPESLPS--GQCMFKSLT 286
                  +   + DGT   + P S + L+          K   P SL S     +    +
Sbjct: 330 NLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLLHGNS 389

Query: 287 SLEI-IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
           S  I +  P+       L NL   +  +I+G     +P G+  L  L KL+L   + L  
Sbjct: 390 SNGIGLRLPSSFSSFRSLSNLDISDCKLIEGA----IPNGICSLISLKKLDLSRNNFLS- 444

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           I + I +L +++ + +  C +L G PE+P
Sbjct: 445 IPAGISELTNLKDLRLGQCQSLTGIPELP 473


>gi|297794603|ref|XP_002865186.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311021|gb|EFH41445.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1216

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 200/387 (51%), Gaps = 35/387 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKN---KCMVH---SLEGVPFTELRYFEWHQFPLKTL- 59
           E+ I+   F+ M  LR L    SKN   K  +H   S + +P T L+   W ++P+  + 
Sbjct: 542 ELHIHESAFTGMRNLRFLDIDSSKNFRKKERLHLPESFDYLPPT-LKLLCWSKYPMSGMP 600

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    +NLV L+M  SK+ +LW+ V +   LK +D+  SK L ++PDLS+A NLE L   
Sbjct: 601 SNFRPDNLVKLRMRKSKLHKLWEGVVSFTCLKEMDMLGSKYLKEIPDLSMATNLETLCFR 660

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI+ LNKL  LD+  CK+LT LPT  + K L  L L  CS L+  P++++
Sbjct: 661 NCESLVELSSSIRNLNKLLRLDMGMCKTLTILPTGFNLKSLDHLNLGSCSELRTFPELST 720

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY----SCKRLENISSSIFKLQFLESIRI 235
               S L L G  IEE PS++  L N+  L I       K+ E +      +  L     
Sbjct: 721 N--VSDLYLFGTNIEEFPSNLH-LKNLVSLTISKKNNDGKQWEGVKPFTPFMAMLSPTLT 777

Query: 236 H----RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           H      P+L  +E+PS   +  + K     +L ++ C   ++LP+G  +  SL  L+  
Sbjct: 778 HLWLDSIPSL--VELPSSFQNLNQLK-----KLTIRNCRNLKTLPTGINLL-SLDDLDFN 829

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C      P+   N+    RL ++ TAI E+P  + + + L++L + +CS L+ +S +I 
Sbjct: 830 GCQQLRSFPEISTNIL---RLELEETAIEEVPWWIEKFSNLTRLIMGDCSRLKCVSLNIS 886

Query: 352 KLKSVESIEISNCS-----NLKGFPEI 373
           KLK +  +  SNC+     +L G+P +
Sbjct: 887 KLKHLGEVSFSNCAALTRVDLSGYPSL 913



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 193/458 (42%), Gaps = 78/458 (17%)

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           P L+ L      + G  S  +P + +KL+ +  +   L  G   F  L  ++++     +
Sbjct: 584 PTLKLLCWSKYPMSGMPSNFRPDNLVKLRMRKSKLHKLWEGVVSFTCLKEMDMLGSKYLK 643

Query: 298 RLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +PD     NL+ L     +  ++ EL   +  L  L +L++  C  L  + +  F LKS
Sbjct: 644 EIPDLSMATNLETL--CFRNCESLVELSSSIRNLNKLLRLDMGMCKTLTILPTG-FNLKS 700

Query: 356 VESIEISNCSNLKGFPEIPFCNID----GSGIERIPSSVL-----------KLNKCSKLE 400
           ++ + + +CS L+ FPE+     D    G+ IE  PS++            K N   + E
Sbjct: 701 LDHLNLGSCSELRTFPELSTNVSDLYLFGTNIEEFPSNLHLKNLVSLTISKKNNDGKQWE 760

Query: 401 SL----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
            +    P    +  +LT L +     L  LP    NL  L++L +     ++ +P  +  
Sbjct: 761 GVKPFTPFMAMLSPTLTHLWLDSIPSLVELPSSFQNLNQLKKLTIRNCRNLKTLPTGINL 820

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
           L+L  L    C    S P    +S ++  LE+                        + TA
Sbjct: 821 LSLDDLDFNGCQQLRSFPE---ISTNILRLEL------------------------EETA 853

Query: 516 IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS 573
           I EVP  + + S+L  L++ D + L+ +  ++++L  L  +  SN   L R+   L    
Sbjct: 854 IEEVPWWIEKFSNLTRLIMGDCSRLKCVSLNISKLKHLGEVSFSNCAALTRVD--LSGYP 911

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK 633
           SL  +++ E  +D I E   S   S+P      ++ ++  +C  LDP  +          
Sbjct: 912 SL--MEMME--VDNISEEASS---SLPDSCVH-KVDLNFMDCFNLDPETV---------- 953

Query: 634 QSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTP 671
             ++ ++ I   M F G E+P +F +++ G + SL  P
Sbjct: 954 --LDQQSNIFNLMVFSGEEVPSYFTYRTIGIS-SLTIP 988


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/346 (37%), Positives = 179/346 (51%), Gaps = 23/346 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPF--TELRYFEWHQFPLKTL-NI 61
           E+ I+   F  M  L  LKF   + K  +  H  +G      +LR   W ++PL+ + + 
Sbjct: 545 EVHIHENAFKGMRNLFFLKFFTKRQKKEIRWHLSKGFDHFPPKLRLLSWEKYPLRCMPSN 604

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            H ENLV L M  SK+ +LWD V  L  LK I+L  SK L ++PDLS+A NLE L L  C
Sbjct: 605 FHPENLVKLVMRWSKLEKLWDGVHPLTGLKEINLWGSKNLIEIPDLSMATNLEKLVLNDC 664

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           SSL E  SSIQYLN+L    ++RC++L  LPT I+ + L  L L GCS LK+ P ++S  
Sbjct: 665 SSLMEIPSSIQYLNELYDFHMERCENLEILPTGINLQSLYDLNLMGCSRLKSFPDISSN- 723

Query: 182 LRSTLPLLGVGIEELPSSIKC--LSNIGELLIYSCKRLENIS--SSIFKLQFLESIRIHR 237
             STL L G  IEELPS++    L N+    + S K  E     + + K+      RI+ 
Sbjct: 724 -ISTLDLYGTTIEELPSNLHLENLVNLRMCEMRSGKLWEREQPLTPLLKMVSPSLTRIYL 782

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
                 +E+PS +I      E    EL +  C   E+LP+G    KSL SL++  C    
Sbjct: 783 SNIPTLVELPS-SIHNLHKLE----ELSIWNCKNLETLPTG-INLKSLYSLDLSGCSQLR 836

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
             PD   N   ++ L ++ TAI E+P  +     LS +   NC EL
Sbjct: 837 CFPDISTN---ISELFLNETAIEEVPWWIENFINLSFI---NCGEL 876



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 166/374 (44%), Gaps = 71/374 (18%)

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           PE L +L +         S+LE +   +  L  ++ I +    NL   P++       + 
Sbjct: 607 PENLVKLVM-------RWSKLEKLWDGVHPLTGLKEINLWGSKNLIEIPDLSM----ATN 655

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           +E+     L LN CS L  +PSS+     L    +  C+ LE LP  + NL++L +L + 
Sbjct: 656 LEK-----LVLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGI-NLQSLYDLNLM 709

Query: 443 G-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
           G + ++  P   + ++   L     ++ E LPS L++ ++L +L + + ++      E  
Sbjct: 710 GCSRLKSFPDISSNISTLDL---YGTTIEELPSNLHL-ENLVNLRMCEMRSGKLWEREQP 765

Query: 502 NLEYLKVLTIKGTAIR--------EVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL 552
               LK+++   T I         E+P S+  L  LE L + +  NL+ +P  +N L SL
Sbjct: 766 LTPLLKMVSPSLTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGIN-LKSL 824

Query: 553 VSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF---------------- 595
            SL LS  + L   P   D  +++  L L E  ++ +P ++ +F                
Sbjct: 825 YSLDLSGCSQLRCFP---DISTNISELFLNETAIEEVPWWIENFINLSFINCGELSEVIL 881

Query: 596 ---PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE 652
              PTS+ +  T L + +   NC K+D   L        M+QS   E        F  +E
Sbjct: 882 NNSPTSVTNN-THLPVCIKFINCFKVDQEALL-------MEQSGFFE--------FSCDE 925

Query: 653 IPKWFRHQSTGSTI 666
           +P +F HQ+ G+++
Sbjct: 926 VPSYFTHQTIGASL 939



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 73/319 (22%)

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV---------GIEELPS 198
           L  +P++ H + L +LV+R  S L+ L            PL G+          + E+P 
Sbjct: 598 LRCMPSNFHPENLVKLVMRW-SKLEKL-------WDGVHPLTGLKEINLWGSKNLIEIPD 649

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE 258
            +   +N+ +L++  C  L  I SSI  L  L    + RC NL+ L         T    
Sbjct: 650 -LSMATNLEKLVLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILP--------TGINL 700

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG--NLQALNRLIIDG 316
           Q   +L L  C R +S P    +  ++++L++      E LP  L   NL  L    +  
Sbjct: 701 QSLYDLNLMGCSRLKSFPD---ISSNISTLDLYGT-TIEELPSNLHLENLVNLRMCEMRS 756

Query: 317 TAIRELPEGLGQL-----ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
             + E  + L  L       L+++ L N   L  + SSI  L  +E + I NC N     
Sbjct: 757 GKLWEREQPLTPLLKMVSPSLTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKN----- 811

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
                                      LE+LP+ + + KSL SL++  C +L   PD   
Sbjct: 812 ---------------------------LETLPTGINL-KSLYSLDLSGCSQLRCFPDIST 843

Query: 432 NLEALEELRVEGTGIREVP 450
           N   + EL +  T I EVP
Sbjct: 844 N---ISELFLNETAIEEVP 859


>gi|15235928|ref|NP_193425.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302805|emb|CAB46046.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268443|emb|CAB80963.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658423|gb|AEE83823.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1304

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 218/449 (48%), Gaps = 65/449 (14%)

Query: 35   VHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
            +   +G+ +  ++LR   W+  PLK L+     E LV L+M  S + +LWD  Q L  LK
Sbjct: 694  MEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLK 753

Query: 92   RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
            ++ L+ SK L ++PDLSLA NLE +D+  C SL    SS+Q   KL  LD+  CK L S 
Sbjct: 754  QMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNAIKLIYLDISDCKKLESF 813

Query: 152  PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
            PT ++ + L+ L L GC NL+N P +           +G    + P          E+++
Sbjct: 814  PTDLNLESLEYLNLTGCPNLRNFPAIK----------MGCSDVDFPEG------RNEIVV 857

Query: 212  YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCP 270
              C   +N+ +    L +L+   + RC   +F               +P   + L  +C 
Sbjct: 858  EDCFWNKNLPAG---LDYLDC--LMRCMPCEF---------------RPEYLVFLNVRCY 897

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
            + E L  G     SL  +++ +  N   +PD L     L  L ++   ++  LP  +G L
Sbjct: 898  KHEKLWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCKSLVTLPSTIGNL 956

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIER 385
              L +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  ++ + IE 
Sbjct: 957  QKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEE 1015

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
            I    L L+K +KLESL              + +CK L  LP  +GNL+ L  L ++  T
Sbjct: 1016 I----LDLSKATKLESLI-------------LNNCKSLVTLPSTIGNLQNLRRLYMKRCT 1058

Query: 445  GIREVPKSLAQLALSKLKLKKCSSFESLP 473
            G+  +P  +   +L  L L  CSS  + P
Sbjct: 1059 GLEVLPTDVNLSSLGILDLSGCSSLRTFP 1087



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 170/616 (27%), Positives = 273/616 (44%), Gaps = 72/616 (11%)

Query: 10   INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLV 68
            I+   F  M  L+ L+     +  +  SL  +P  +LR  EW   PLK+L +    E LV
Sbjct: 535  IDEKLFKGMRNLQYLEIGYWSDGDLPQSLVYLPL-KLRLLEWVYCPLKSLPSTFRAEYLV 593

Query: 69   SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
             L M  SK+ +LW+    L SLK+++L YSK   ++PDLSLA NLE L+L  C SL    
Sbjct: 594  KLIMKNSKLEKLWEGTLPLGSLKKMNLWYSKYFKEIPDLSLAINLEELNLSECESLVTLP 653

Query: 129  SSIQYLNK----------------------LEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
            SSIQ   K                      LE L +D C  +      ++     RL+L 
Sbjct: 654  SSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVD-CSRMEGTQGIVYFPSKLRLLLW 712

Query: 167  GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
                LK L           L +    +E+L    + L  + ++ +   K L+ I      
Sbjct: 713  NNCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLA 772

Query: 227  LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
            +  LE + I +C +L  +  PS   +  +        L +  C + ES P+     +SL 
Sbjct: 773  IN-LEEVDICKCESL--VTFPSSMQNAIK-----LIYLDISDCKKLESFPT-DLNLESLE 823

Query: 287  SLEIIDCPNFERLP------DELGNLQALNRLII-DGTAIRELPEGLGQLALLSK---LE 336
             L +  CPN    P       ++   +  N +++ D    + LP GL  L  L +    E
Sbjct: 824  YLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCE 883

Query: 337  LK---------NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIP 387
             +          C + E +   I  L S+E +++S   NL   P++       + ++   
Sbjct: 884  FRPEYLVFLNVRCYKHEKLWEGIQSLGSLEEMDLSESENLTEIPDLS----KATNLKH-- 937

Query: 388  SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGI 446
               L LN C  L +LPS++   + L  LE+ +C  LE LP ++ NL +LE L + G + +
Sbjct: 938  ---LYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSL 993

Query: 447  REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            R  P  L   ++  L L+  +  E L   L  +  L SL + +CK+ + LP  IGNL+ L
Sbjct: 994  RTFP--LISKSIKWLYLENTAIEEILD--LSKATKLESLILNNCKSLVTLPSTIGNLQNL 1049

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERI 565
            + L +K     EV  +   LSSL  L LS  ++L+  P      +++V L L N  +  +
Sbjct: 1050 RRLYMKRCTGLEVLPTDVNLSSLGILDLSGCSSLRTFPLI---STNIVWLYLENTAIGEV 1106

Query: 566  PERLDPLSSLKYLDLF 581
            P  ++  + L+ L ++
Sbjct: 1107 PCCIEDFTRLRVLLMY 1122


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 265/573 (46%), Gaps = 89/573 (15%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWE- 65
            E+ +    F  M  LRLL+   S+ +     L       L++ +W Q PL+ +   +   
Sbjct: 593  EVVLQAKNFESMVSLRLLQINYSRLEGQFRCLP----PGLKWLQWKQCPLRYMPSSYSPL 648

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVS--LKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             L  + +  S +  LW    N V+  L  ++L     LT  PDL+   +L+ + L  CS 
Sbjct: 649  ELAVMDLSESNIETLWSRSNNKVAEHLMVLNLSNCHRLTATPDLTGYLSLKKIVLEECSH 708

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH- 181
            L   H S+  L+ L  L+L  C +L  LP+ +   K+L+ L+L  C  LK LPK  SC  
Sbjct: 709  LIRIHESLGNLSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMI 768

Query: 182  -LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
             LR  L +    + ELP SI  L+ +  L    C  L+ + + I KL  L+ +       
Sbjct: 769  CLRQLL-IDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQEL------- 820

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                     +++ T  +E P S   L+K                L  L ++ C +   +P
Sbjct: 821  ---------SLNHTALEELPYSVGSLEK----------------LEKLSLVGCKSLSVIP 855

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV---- 356
            + +GNL +L +L +D + I+ELP  +G L+ L KL +  C+ L+ +  SI  L S+    
Sbjct: 856  NSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQ 915

Query: 357  -------------------ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
                               E +E+ NC NL+  P + F  +          + L L++ +
Sbjct: 916  LDGTKITTLPDQIDAMQMLEKLEMKNCENLRFLP-VSFGCLSAL-------TSLDLHE-T 966

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL- 456
             +  LP S+ M ++L  L +  CK+L+RLPD  GNL++L+ L+++ T +  +P S   L 
Sbjct: 967  NITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKETTLTHLPDSFGMLT 1026

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGT 514
            +L KL +++         RLY++ + T + I + +  N   +     NL  L+ L   G 
Sbjct: 1027 SLVKLDMER---------RLYLNGA-TGVIIPNKQEPNSKAILRSFCNLTLLEELNAHGW 1076

Query: 515  AI-REVPESLGQLSSLEWLVLSDNNLQIIPESL 546
             +  ++P+   +LSSLE L L  NN+  +P S+
Sbjct: 1077 GMCGKIPDDFEKLSSLETLSLGHNNIFSLPASM 1109



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 165/331 (49%), Gaps = 37/331 (11%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
             L L+ C     LPS     K L  L + DC   + LP +L  +  L +L+ID TA+ EL
Sbjct: 724  HLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTEL 783

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            PE +  L  L  L    C+ L+ + + I KL S++ + +++ +                 
Sbjct: 784  PESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTA----------------- 826

Query: 383  IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                            LE LP S+   + L  L ++ CK L  +P+ +GNL +L +L ++
Sbjct: 827  ----------------LEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFLD 870

Query: 443  GTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
             +GI+E+P S+  L+ L KL +  C+S + LP  +    S+  L+ +D      LPD+I 
Sbjct: 871  ISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQ-LDGTKITTLPDQID 929

Query: 502  NLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN- 559
             ++ L+ L +K    +R +P S G LS+L  L L + N+  +PES+  L +L+ L+L   
Sbjct: 930  AMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMC 989

Query: 560  NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
              L+R+P+    L SL++L + E  L  +P+
Sbjct: 990  KQLQRLPDSFGNLKSLQWLQMKETTLTHLPD 1020


>gi|167999638|ref|XP_001752524.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696424|gb|EDQ82763.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 539

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 261/552 (47%), Gaps = 66/552 (11%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           LDL  CS+L    ++I++L  L+ L+L  C+SL  LP SI S   L+ L ++GC +L +L
Sbjct: 7   LDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGCYSLISL 66

Query: 175 P-KMTSCHLRSTLPL-LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           P ++ +    +TL +   + +  LP+ +  L+++  L I  C  L  + + +  L  L +
Sbjct: 67  PNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTA 126

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + ++ C +L  L     N+    +       L L  C R  SLP+     K+LT+L++ D
Sbjct: 127 LYVNDCSSLTSLPNDLGNLTSLIT-------LDLSDCKRLTSLPNELGNLKALTTLDLSD 179

Query: 293 CPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C     LP+EL NL +L  L I D +++  LP  LG L  L+ L ++ C  L  + +   
Sbjct: 180 CKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLGILTSLTTLNMRRCRSLISLPNEFG 239

Query: 352 KLKSVESIEISNCSNLKGFPE--IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
            L S+  ++IS CS+    P       ++    I   PS +L          LP+ +  F
Sbjct: 240 NLTSLTILDISYCSSSTSLPNELGNLISLTTLNISYYPSLIL----------LPNDIGNF 289

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-------------------------T 444
            +LT+L I  C  L  LP+ELGNL +L  L                             +
Sbjct: 290 TTLTTLNISYCSSLTLLPNELGNLTSLTILDTTNFSSLISLVNKLDNLAFLTTLCITNWS 349

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            I  +   L  L +L+ L +  CSS  SLP+ L    SLT+L I +C N   LP+E+GNL
Sbjct: 350 SITSLSNELGNLTSLTTLYITNCSSLTSLPNELGNLTSLTTLYISNCSNLTLLPNELGNL 409

Query: 504 EYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-N 560
             L  L I   +++  +P  L  L+SL  L + D ++L  +P  L+ L+SL S  + + +
Sbjct: 410 TSLTTLDISNCSSLISLPNELDNLTSLTALYIIDCSSLTSLPNELDNLTSLTSFYICDYS 469

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSL----RLSVDLRNCL 616
           NL  +   L   +SL  LD+          Y  SF T +P +  +L     L +   + L
Sbjct: 470 NLILLSNELSNFTSLTILDI---------SYCSSF-TLLPKKLGNLISLTTLDISYYSSL 519

Query: 617 KLDPNELSEIIK 628
              PN+LS +I 
Sbjct: 520 TSLPNKLSNLIS 531



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 237/509 (46%), Gaps = 59/509 (11%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGS-KVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +L   +     +  ++I    +L +L M G   +  L +++ NL SL  +D+ Y   LT 
Sbjct: 30  KLNLIDCESLRILPMSIKSLNSLENLNMKGCYSLISLPNELGNLTSLTTLDISYCLSLTS 89

Query: 104 LPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLK 161
           LP+ L    +L  LD+ YCSSLT   + +  L  L  L ++ C SLTSLP  + +   L 
Sbjct: 90  LPNELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDCSSLTSLPNDLGNLTSLI 149

Query: 162 RLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLEN 219
            L L  C  L +LP ++ +    +TL L     +  LP+ +  L+++  L I  C  L  
Sbjct: 150 TLDLSDCKRLTSLPNELGNLKALTTLDLSDCKRLTSLPNELDNLTSLTTLDISDCSSLTL 209

Query: 220 ISSSIFKLQFLESIRIHRC------PN-------LQFLEMPSCNIDGTRSKEQPS----S 262
           + + +  L  L ++ + RC      PN       L  L++  C+   +   E  +    +
Sbjct: 210 LPNKLGILTSLTTLNMRRCRSLISLPNEFGNLTSLTILDISYCSSSTSLPNELGNLISLT 269

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL---------- 312
            L +   P    LP+    F +LT+L I  C +   LP+ELGNL +L  L          
Sbjct: 270 TLNISYYPSLILLPNDIGNFTTLTTLNISYCSSLTLLPNELGNLTSLTILDTTNFSSLIS 329

Query: 313 ---------------IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
                          I + ++I  L   LG L  L+ L + NCS L  + + +  L S+ 
Sbjct: 330 LVNKLDNLAFLTTLCITNWSSITSLSNELGNLTSLTTLYITNCSSLTSLPNELGNLTSLT 389

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           ++ ISNCSNL   P           +  + S + L ++ CS L SLP+ L    SLT+L 
Sbjct: 390 TLYISNCSNLTLLPN---------ELGNLTSLTTLDISNCSSLISLPNELDNLTSLTALY 440

Query: 417 IIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
           IIDC  L  LP+EL NL +L    + + + +  +   L+   +L+ L +  CSSF  LP 
Sbjct: 441 IIDCSSLTSLPNELDNLTSLTSFYICDYSNLILLSNELSNFTSLTILDISYCSSFTLLPK 500

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
           +L    SLT+L+I    +   LP+++ NL
Sbjct: 501 KLGNLISLTTLDISYYSSLTSLPNKLSNL 529



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 174/324 (53%), Gaps = 16/324 (4%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRE 321
           EL L+ C   E LP+     KSL  L +IDC +   LP  + +L +L  L + G  ++  
Sbjct: 6   ELDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGCYSLIS 65

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  LG L  L+ L++  C  L  + + +  L S+ +++IS CS+L   P          
Sbjct: 66  LPNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPN--------- 116

Query: 382 GIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
            +  + S + L +N CS L SLP+ L    SL +L++ DCK+L  LP+ELGNL+AL  L 
Sbjct: 117 ELGNLTSLTALYVNDCSSLTSLPNDLGNLTSLITLDLSDCKRLTSLPNELGNLKALTTLD 176

Query: 441 VEGTG-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           +     +  +P  L  L +L+ L +  CSS   LP++L +  SLT+L +  C++ + LP+
Sbjct: 177 LSDCKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLGILTSLTTLNMRRCRSLISLPN 236

Query: 499 EIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLK 556
           E GNL  L +L I   ++   +P  LG L SL  L +S   +L ++P  +   ++L +L 
Sbjct: 237 EFGNLTSLTILDISYCSSSTSLPNELGNLISLTTLNISYYPSLILLPNDIGNFTTLTTLN 296

Query: 557 LSN-NNLERIPERLDPLSSLKYLD 579
           +S  ++L  +P  L  L+SL  LD
Sbjct: 297 ISYCSSLTLLPNELGNLTSLTILD 320



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 140/258 (54%), Gaps = 15/258 (5%)

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
           +A L +L+L+ CS LE + ++I  LKS++ + + +C +L+  P           I+ + S
Sbjct: 1   MATLLELDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPM---------SIKSLNS 51

Query: 389 -SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGI 446
              L +  C  L SLP+ L    SLT+L+I  C  L  LP+ELGNL +L  L +   + +
Sbjct: 52  LENLNMKGCYSLISLPNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYCSSL 111

Query: 447 REVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             +P  L  L +L+ L +  CSS  SLP+ L    SL +L++ DCK    LP+E+GNL+ 
Sbjct: 112 TLLPNELGNLTSLTALYVNDCSSLTSLPNDLGNLTSLITLDLSDCKRLTSLPNELGNLKA 171

Query: 506 LKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNL 562
           L  L +     +  +P  L  L+SL  L +SD ++L ++P  L  L+SL +L +    +L
Sbjct: 172 LTTLDLSDCKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLGILTSLTTLNMRRCRSL 231

Query: 563 ERIPERLDPLSSLKYLDL 580
             +P     L+SL  LD+
Sbjct: 232 ISLPNEFGNLTSLTILDI 249



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 17/177 (9%)

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-A 515
            L +L L+ CS+ E LP+ +   KSL  L +IDC++   LP  I +L  L+ L +KG  +
Sbjct: 3   TLLELDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGCYS 62

Query: 516 IREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS 573
           +  +P  LG L+SL  L +S   +L  +P  L  L+SL +L +S  ++L  +P  L  L+
Sbjct: 63  LISLPNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPNELGNLT 122

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR--LSVDLRNCLKLD--PNELSEI 626
           SL    L+ N+   +        TS+P++  +L   +++DL +C +L   PNEL  +
Sbjct: 123 SLTA--LYVNDCSSL--------TSLPNDLGNLTSLITLDLSDCKRLTSLPNELGNL 169


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 177/616 (28%), Positives = 284/616 (46%), Gaps = 102/616 (16%)

Query: 15   FSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL------NILHWENLV 68
            F  M +LRLL+    +   +  +LE +P ++L++ +W   PLK +        L   +L 
Sbjct: 575  FVPMKKLRLLQINHVE---LQGNLELLP-SDLKWIQWRGCPLKDVPASFLSRQLAVLDLS 630

Query: 69   SLKMPGSKVTQL-WDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTET 127
               + G + +QL    +Q   +L+ ++L+    L  +PDLS  ++LE L    C  L E 
Sbjct: 631  ESGIRGFQSSQLKIVGLQVEGNLRVVNLRGCDSLEAIPDLSNHKSLEKLVFEGCKLLVEV 690

Query: 128  HSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTL 186
             SS+  L  L  LDL  C +LT     +   K L++L L GCS+L  LP+     L    
Sbjct: 691  PSSVGNLRSLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYML---- 746

Query: 187  PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
                           CL    ELL+     ++N+  SIF+L+ L+ + +  C ++   E+
Sbjct: 747  ---------------CLK---ELLLDETA-IKNLPGSIFRLEKLQKLSLKSCRSIH--EL 785

Query: 247  PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
            P C    T  +E   S   L      +SLPS     K+L  L ++ C +  ++PD +  L
Sbjct: 786  PECIGTLTSLEELDLSSTSL------QSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKL 839

Query: 307  QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
             +L  LIIDG+A+ ELP           L LK  S L  I  +I KL S++ + I   + 
Sbjct: 840  ASLQELIIDGSAVEELP-----------LSLKPGS-LSKIPDTINKLASLQELIIDGSA- 886

Query: 367  LKGFPEIPFCNIDGS-------------GIERIPSSVLKLNKCSKLE-------SLPSSL 406
                 E+P     GS              ++++PSSV  LN   +L+       +LP  +
Sbjct: 887  ---VEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSSVGWLNSLLQLKLDSTPITTLPEEI 943

Query: 407  CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKK 465
               + +  +E+ +C  L+ LP+++G+++ L  L +EG+ I E+P++   L  L  L++ K
Sbjct: 944  SQLRFIQKVELRNCLSLKSLPNKIGDMDTLHSLYLEGSNIEELPENFGNLENLVLLQMNK 1003

Query: 466  CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
            C + + LP+     KSL  L + +    M LP   GNL  L+VL +       +P SL  
Sbjct: 1004 CKNLKKLPNSFGGLKSLCHLYMEETL-VMELPGSFGNLSNLRVLNLGNNKFHSLPSSLKG 1062

Query: 526  LSSLEWLVLSD-NNLQIIP-----------------ESLNQLSSLV---SLKLSNNNLER 564
            LSSL+ L L D   L  +P                 ES++ LS L     L L+N  +  
Sbjct: 1063 LSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCSLESISDLSELTMLHELNLTNCGIVD 1122

Query: 565  IPERLDPLSSLKYLDL 580
                L+ L++LK LD+
Sbjct: 1123 DIPGLEHLTALKRLDM 1138



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 258/556 (46%), Gaps = 77/556 (13%)

Query: 55   PLKTLNILHWENLVSLKMPGSKVTQLWD-DVQNLVSLKRIDLKYSKL----LTKLPDLSL 109
            P +T N +  E+ V +K    ++ Q+   ++Q  + L   DLK+ +     L  +P   L
Sbjct: 563  PTRTENTIPVEHFVPMKK--LRLLQINHVELQGNLELLPSDLKWIQWRGCPLKDVPASFL 620

Query: 110  AQNLEILDL------GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            ++ L +LDL      G+ SS  +    +Q    L V++L  C SL ++P   + K L++L
Sbjct: 621  SRQLAVLDLSESGIRGFQSSQLKI-VGLQVEGNLRVVNLRGCDSLEAIPDLSNHKSLEKL 679

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            V  GC  L                       E+PSS+  L ++  L + +C  L      
Sbjct: 680  VFEGCKLLV----------------------EVPSSVGNLRSLLHLDLRNCPNLTEFLVD 717

Query: 224  IFKLQFLESIRIHRCPNLQFLE--------MPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
            +  L+ LE + +  C +L  L         +    +D T  K  P S  +L+K       
Sbjct: 718  VSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEK------- 770

Query: 276  PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                     L  L +  C +   LP+ +G L +L  L +  T+++ LP  +G L  L KL
Sbjct: 771  ---------LQKLSLKSCRSIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKL 821

Query: 336  ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
             + +C+ L  I  +I KL S++ + I   +      E+P     GS + +IP ++ KL  
Sbjct: 822  HVMHCASLSKIPDTINKLASLQELIIDGSA----VEELPLSLKPGS-LSKIPDTINKLAS 876

Query: 396  C-------SKLESLPSSL--CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                    S +E LP SL       L       CK L+++P  +G L +L +L+++ T I
Sbjct: 877  LQELIIDGSAVEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSSVGWLNSLLQLKLDSTPI 936

Query: 447  REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
              +P+ ++QL  + K++L+ C S +SLP+++    +L SL  ++  N   LP+  GNLE 
Sbjct: 937  TTLPEEISQLRFIQKVELRNCLSLKSLPNKIGDMDTLHSL-YLEGSNIEELPENFGNLEN 995

Query: 506  LKVLTI-KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L +L + K   ++++P S G L SL  L + +  +  +P S   LS+L  L L NN    
Sbjct: 996  LVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETLVMELPGSFGNLSNLRVLNLGNNKFHS 1055

Query: 565  IPERLDPLSSLKYLDL 580
            +P  L  LSSLK L L
Sbjct: 1056 LPSSLKGLSSLKELSL 1071


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 166/534 (31%), Positives = 251/534 (47%), Gaps = 67/534 (12%)

Query: 6    SEIQINPYTFSKMTELRLLK--------FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLK 57
            + I I    F  M  LRLLK        F    NK  +      P  ELRY  WH +PL+
Sbjct: 752  TRIHITTEAFVMMKNLRLLKIYWDLESAFMREDNKVKLSKDFEFPSYELRYLHWHGYPLE 811

Query: 58   TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEI 115
            +L +  + E+LV L M  S + +LW+    L  L  I +  S+ L ++PD+ + A NLE 
Sbjct: 812  SLPLGFYAEDLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNLEK 871

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L L  CSSL E H SI  LNKL +L+L  CK L   P+ I  K L+ L    CS LK  P
Sbjct: 872  LILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSSCSGLKKFP 931

Query: 176  KMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
             +   ++ + L L      IEELPSSI  L+ +  L +  CK L+++ +SI KL+ LE++
Sbjct: 932  NIQG-NMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENL 990

Query: 234  RIHRCPNLQFLEMPSCN--------IDGTRSKEQPSSE--------LKLKKCPRPESLPS 277
             +  C  L+     + N        +DGT  +  P S         L L+KC    SL +
Sbjct: 991  SLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSN 1050

Query: 278  GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
            G C   SL +L +  C     LP  LG+LQ L +L  DGTAI + P+ +        + L
Sbjct: 1051 GMCNLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSI--------VLL 1102

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
            +N   L Y    I    S+ S        L  F  +   + +G G+              
Sbjct: 1103 RNLQVLIYPGCKILAPNSLGS--------LFSFWLLHGNSSNGIGLR------------- 1141

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
                LPSS   F+SL++L+I DCK +E  +P+ + +L +L++L +       +P  +++L
Sbjct: 1142 ----LPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISEL 1197

Query: 457  A-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
              L  L+L +C S   +P    +  S+  ++  +C   +     +  L+ L+ L
Sbjct: 1198 TNLKDLRLGQCQSLTGIPE---LPPSVRDIDAHNCTALLPGSSSVSTLQGLQFL 1248



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 253/557 (45%), Gaps = 88/557 (15%)

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             K+L  L    C   ++ P+  GN++ L  L +  TAI ELP  +G L  L  L+LK C 
Sbjct: 913  MKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 972

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--FCN-----IDGSGIERIPSSV---- 390
             L+ + +SI KLKS+E++ +S CS L+ FPE+     N     +DG+ IE +P S+    
Sbjct: 973  NLKSLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLK 1032

Query: 391  ----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                L L KC  L SL + +C   SL +L +  C +L  LP  LG+L+ L +L  +GT I
Sbjct: 1033 GLILLNLRKCKNLVSLSNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAI 1092

Query: 447  REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN----FMRLPDEIG 501
             + P S+  L  L  L    C      P+ L    SL S  ++   +     +RLP    
Sbjct: 1093 AQPPDSIVLLRNLQVLIYPGCKILA--PNSL---GSLFSFWLLHGNSSNGIGLRLPSSFS 1147

Query: 502  NLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
            +   L  L I    + E  +P  +  L SL+ L LS NN   IP  +++L++L  L+L  
Sbjct: 1148 SFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQ 1207

Query: 560  -NNLERIPERLDPLSSLKYLDLFENNLDRIP-----------EYLRSFPTSIPSEFTSLR 607
              +L  IPE L P  S++ +D   N    +P           ++L  +  S P E  S  
Sbjct: 1208 CQSLTGIPE-LPP--SVRDIDA-HNCTALLPGSSSVSTLQGLQFL-FYNCSKPVEDQS-- 1260

Query: 608  LSVDLRNCLKLDPN-------ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
             S D R  L++ P+         S +     M Q +     I  S+ FPG  IP W  HQ
Sbjct: 1261 -SDDKRTELQIFPHIYVSSTASESSVTTSPVMMQKL--LENIAFSIVFPGTGIPDWIWHQ 1317

Query: 661  STGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNL----FDVVCDR 716
            + GS+I ++ P     +  +GFA C V+          E + +   C+L    FD   D 
Sbjct: 1318 NVGSSIKIQLPTDWYSDDFLGFALCSVL----------EHLPERIICHLNSDVFD-YGDL 1366

Query: 717  RSEGYDSYTSSYLGKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFHIDR--- 765
            +  G+D +   + G I  V S+HV+LG           F   N     +  F    R   
Sbjct: 1367 KDFGHDFH---WTGNI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAHRFNS 1421

Query: 766  -SCCEVKKCGIHFVHAQ 781
             +   VKKCG+  ++A+
Sbjct: 1422 SASNVVKKCGVCLIYAE 1438


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 207/780 (26%), Positives = 328/780 (42%), Gaps = 194/780 (24%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
            +SEI I   +F+ MT+LRLL+     N  +  +L+ +P +EL++ +W   PL+ L  + L
Sbjct: 588  SSEITIPVESFAPMTKLRLLQI---NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDFL 643

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLV--SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
              + L  L +  S + Q+      +V  +LK + L+    L  +PDLS  + LE L    
Sbjct: 644  ARQ-LSVLDLSESGIRQVQTLRNKMVDENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQ 702

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
            C+ L +   S+  L KL  LD  RC  L+     +   K L++L L GCS+L        
Sbjct: 703  CTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS------- 755

Query: 180  CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                            LP +I  ++++ ELL+     ++N+  SI +LQ           
Sbjct: 756  ---------------VLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ----------- 788

Query: 240  NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            NL+ L +  C I                                             + L
Sbjct: 789  NLEILSLRGCKI---------------------------------------------QEL 803

Query: 300  PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
            P  +G L++L +L +D TA++ LP  +G L  L  L L  C+ L  I  SI +LKS++ +
Sbjct: 804  PLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKL 863

Query: 360  EISNCSNLKGFPEIP--------FCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
             I N S ++  P  P        F   D   ++++PSS+ +LN         + +E+LP 
Sbjct: 864  FI-NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPE 922

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
             +     +  LE+ +CK L+ LP  +G+++ L  L +EG+ I E+P+   +L  L +L++
Sbjct: 923  EIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 982

Query: 464  KKCSSFESLPS---------RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL----- 509
              C   + LP          RLY+ ++L S           LP+  GNL  L VL     
Sbjct: 983  SNCKMLKRLPESFGDLKSLHRLYMKETLVS----------ELPESFGNLSNLMVLEMLKK 1032

Query: 510  --------TIKGTA----IREVPESLGQLSSLE------WLVLSDNNLQIIPESLNQLSS 551
                     + GT+      EVP S  +L  LE      W +        IP+ L +LS 
Sbjct: 1033 PLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGK-----IPDDLEKLSC 1087

Query: 552  LVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIP---------EYLRSFPTSIPS 601
            L+ L L NN    +P  L  LS+L+ L L +   L R+P              F     S
Sbjct: 1088 LMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVS 1147

Query: 602  EFTSLRLSVDLR--NCLKL-DPNELSEI--IKDGWM------------KQSVNGETYITK 644
            + + L +  DL   NC K+ D   L  +  +K  +M            K+       + +
Sbjct: 1148 DLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMR 1207

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
            ++  PGN +P WF   S G      + QP    +L G    VVVA        ++  EDD
Sbjct: 1208 NLSLPGNRVPDWF---SQGPVTF--SAQPN--RELRGVIIAVVVAL-------NDETEDD 1253


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 224/486 (46%), Gaps = 103/486 (21%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+        +MT LR LKF   +N  +    E +P  ELR+ +WH +P K L N    +
Sbjct: 548 EVNFGGKALMQMTSLRFLKF---RNAYVYQGPEFLP-DELRWLDWHGYPSKNLPNSFKGD 603

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LVSLK+  S++ QLW   ++L  LK ++L +S+ L ++PD S+  NLE L L  C+SL 
Sbjct: 604 QLVSLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLV 663

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-S 184
           E + SI  L KL +L+L  C++L ++P  I  + L+ LVL GCS L+  P++     R +
Sbjct: 664 EINFSIGDLGKLVLLNLKNCRNLKTIPKRIRLEKLEVLVLSGCSKLRTFPEIEEKMNRLA 723

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    + ELP+S++  S +G + +  CK LE++ SSIF+L+ L+++ +  C      
Sbjct: 724 ELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS----- 778

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                               KLK  P                              D+LG
Sbjct: 779 --------------------KLKNLP------------------------------DDLG 788

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL-----------EYISSSIFK- 352
            L  + +L    TAI+ +P  +  L  L  L L  C+ L           + +  + F+ 
Sbjct: 789 LLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQKSMGINFFQN 848

Query: 353 ---LKSVESIEISNC--------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
              L S+  +++S+C        SNL   P +    +DG+    IP++   +++ ++L+ 
Sbjct: 849 LSGLCSLIKLDLSDCNISDGGILSNLGLLPSLKVLILDGNNFSNIPAA--SISRLTRLKC 906

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSK 460
           L    C     TSLEI     L +LP  +  + A E   + G   + E P       LS+
Sbjct: 907 LALHGC-----TSLEI-----LPKLPPSIKGIYANESTSLMGFDQLTEFP------MLSE 950

Query: 461 LKLKKC 466
           + L KC
Sbjct: 951 VSLAKC 956



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 229/477 (48%), Gaps = 60/477 (12%)

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS----GQCMFKSLT-SLEIIDCPN 295
            L +   PS N+  +   +Q  S LKLKK    +   +    G+  + +L+ S ++I  P+
Sbjct: 586  LDWHGYPSKNLPNSFKGDQLVS-LKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPD 644

Query: 296  FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            F   P+       L RL+++  T++ E+   +G L  L  L LKNC  L+ I   I +L+
Sbjct: 645  FSVTPN-------LERLVLEECTSLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRI-RLE 696

Query: 355  SVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKL 399
             +E + +S CS L+ FPEI           +  + +  +P+SV        + L+ C  L
Sbjct: 697  KLEVLVLSGCSKLRTFPEIEEKMNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHL 756

Query: 400  ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-L 458
            ESLPSS+   K L +L++  C KL+ LPD+LG L  +E+L    T I+ +P S++ L  L
Sbjct: 757  ESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLLKNL 816

Query: 459  SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
              L L  C++  S  S     +    +      NF +    +  L  L  L +    I +
Sbjct: 817  KHLSLSGCNALSSQVSSSSHGQKSMGI------NFFQ---NLSGLCSLIKLDLSDCNISD 867

Query: 519  --VPESLGQLSSLEWLVLSDNNLQIIP-ESLNQLSSLVSLKLSN-NNLERIPERLDPLSS 574
              +  +LG L SL+ L+L  NN   IP  S+++L+ L  L L    +LE +P +L P  S
Sbjct: 868  GGILSNLGLLPSLKVLILDGNNFSNIPAASISRLTRLKCLALHGCTSLEILP-KLPP--S 924

Query: 575  LKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
            +K +   E+      + L  FP  + SE       V L  C +L  N+L   + D  +K+
Sbjct: 925  IKGIYANESTSLMGFDQLTEFP--MLSE-------VSLAKCHQLVKNKLHTSMADLLLKE 975

Query: 635  SVNGETYITKS--MYFPGNEIPKWFRHQSTGS-TISLKTPQPTGYNKLMGFAFCVVV 688
             +    Y+     +Y PG EIP+WF +++ G+ +IS+  P         GF  CVV+
Sbjct: 976  MLEA-LYMNFRFCLYVPGMEIPEWFTYKNWGTESISVALPTNWFTPTFRGFTVCVVL 1031


>gi|168023045|ref|XP_001764049.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684788|gb|EDQ71188.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 625

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 261/555 (47%), Gaps = 51/555 (9%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL  +D+     LT LP+ L    +L  L++G CSSLT   + +  
Sbjct: 55  SSLTSLPNELGNLTSLITLDMWGCSSLTSLPNELGNLTSLPTLNMGGCSSLTSLPNELGN 114

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L  L++  C  LTSLP  + +   L  + +  CS+L +LP      L + + L  + 
Sbjct: 115 LTSLTTLNIWWCLRLTSLPNELDNLSSLTTMDMWRCSSLTSLPN----ELGNLISLTTLN 170

Query: 193 IEE------LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL----- 241
           I E      LP+ +  L+++   ++  C  L ++ S +  L  L  + I    +L     
Sbjct: 171 ISECSSLTSLPNELGNLTSLTTFIVSRCSSLTSLPSELGNLTSLSILNISGYSSLISLPN 230

Query: 242 ---QFLEMPSCNIDGTRSKEQPSSELK---------LKKCPRPESLPSGQCMFKSLTSLE 289
                  +    I G  S     +EL          + +C    SLP+      SLT+L 
Sbjct: 231 ELGNLTSLTILKISGYSSLTSLPNELGNLTSLTTSYMSRCSSLTSLPNELGNLTSLTTLN 290

Query: 290 IIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +  C +   LP+ELGNL +L  L I   +++  L   LG L  L+ L +  C  L  +S+
Sbjct: 291 MWGCSSLTTLPNELGNLTSLTILNISSCSSLTSLSNELGNLTSLTTLNMARCLSLTTLSN 350

Query: 349 SIFKLKSVESIEISNCSNLK-------GFPEIPFCNIDGSG--------IERIPS-SVLK 392
            +  L S+ ++++S  S+L            +   NI            +  + S + L 
Sbjct: 351 ELGNLTSLTTLDVSIFSSLTSLLNELGNLTSLTILNISSCSSLTSLSKKLGNLTSLTTLN 410

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPK 451
           ++ CS L SLP+ LC   SLT+ ++  C  L  LP+ELGNL +L  L V   + +  +P 
Sbjct: 411 ISYCSSLTSLPNELCNLTSLTTFDMWRCSSLISLPNELGNLTSLTTLDVSICSSMTSLPN 470

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            L  L +L+ L + +CS   SLP  L    SLT L I +C +   L +E+GNL  L  L 
Sbjct: 471 ELGNLTSLTTLDMWECSCLISLPIELGNLTSLTILNISECSSLTSLLNELGNLTSLTTLD 530

Query: 511 IK-GTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS-NNNLERIPE 567
           +   +++   P  LG L+S   L +S  ++L  +P  L  L+SL +L +S  ++L  +P 
Sbjct: 531 VSIYSSLTSFPNELGNLTSSNILNISSCSSLTSLPNELGNLTSLTTLNISYYSSLTSLPN 590

Query: 568 RLDPLSSLKYLDLFE 582
               L+SL   +++E
Sbjct: 591 EFGNLTSLTTFEIYE 605



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 270/576 (46%), Gaps = 49/576 (8%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVL 140
           +++ NL SL  +++     L  LP+ L    +L  LD+  CSSLT   + +  L  L  L
Sbjct: 14  NELGNLTSLTTMNISNCSSLISLPNELGNLTSLTTLDVSICSSLTSLPNELGNLTSLITL 73

Query: 141 DLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI------ 193
           D+  C SLTSLP  + +   L  L + GCS+L +LP      L +   L  + I      
Sbjct: 74  DMWGCSSLTSLPNELGNLTSLPTLNMGGCSSLTSLPN----ELGNLTSLTTLNIWWCLRL 129

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
             LP+ +  LS++  + ++ C  L ++ + +  L  L ++ I  C +L  L     N+  
Sbjct: 130 TSLPNELDNLSSLTTMDMWRCSSLTSLPNELGNLISLTTLNISECSSLTSLPNELGNLTS 189

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
             +         + +C    SLPS      SL+ L I    +   LP+ELGNL +L  L 
Sbjct: 190 LTT-------FIVSRCSSLTSLPSELGNLTSLSILNISGYSSLISLPNELGNLTSLTILK 242

Query: 314 IDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           I G +++  LP  LG L  L+   +  CS L  + + +  L S+ ++ +  CS+L   P 
Sbjct: 243 ISGYSSLTSLPNELGNLTSLTTSYMSRCSSLTSLPNELGNLTSLTTLNMWGCSSLTTLPN 302

Query: 373 IPFCNIDGSGIERIPS-----------------SVLKLNKCSKLESLPSSLCMFKSLTSL 415
               N+    I  I S                 + L + +C  L +L + L    SLT+L
Sbjct: 303 -ELGNLTSLTILNISSCSSLTSLSNELGNLTSLTTLNMARCLSLTTLSNELGNLTSLTTL 361

Query: 416 EIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
           ++     L  L +ELGNL +L  L +   + +  + K L  L +L+ L +  CSS  SLP
Sbjct: 362 DVSIFSSLTSLLNELGNLTSLTILNISSCSSLTSLSKKLGNLTSLTTLNISYCSSLTSLP 421

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-GTAIREVPESLGQLSSLEWL 532
           + L    SLT+ ++  C + + LP+E+GNL  L  L +   +++  +P  LG L+SL  L
Sbjct: 422 NELCNLTSLTTFDMWRCSSLISLPNELGNLTSLTTLDVSICSSMTSLPNELGNLTSLTTL 481

Query: 533 VLSDNNLQI-IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            + + +  I +P  L  L+SL  L +S  ++L  +   L  L+SL  LD+       I  
Sbjct: 482 DMWECSCLISLPIELGNLTSLTILNISECSSLTSLLNELGNLTSLTTLDV------SIYS 535

Query: 591 YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
            L SFP  + +  +S  L++   + L   PNEL  +
Sbjct: 536 SLTSFPNELGNLTSSNILNISSCSSLTSLPNELGNL 571



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 199/439 (45%), Gaps = 40/439 (9%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLK-YSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L  ++ NL SL  +++  YS L++   +L    +L IL +   SSLT   + +  
Sbjct: 199 SSLTSLPSELGNLTSLSILNISGYSSLISLPNELGNLTSLTILKISGYSSLTSLPNELGN 258

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L    + RC SLTSLP  + +   L  L + GCS+L  LP      L +   L  + 
Sbjct: 259 LTSLTTSYMSRCSSLTSLPNELGNLTSLTTLNMWGCSSLTTLPN----ELGNLTSLTILN 314

Query: 193 IEELPSSIKCLSNIGELL------IYSCKRLENISSSIFKLQFLESIRIH---------- 236
           I    S     + +G L       +  C  L  +S+ +  L  L ++ +           
Sbjct: 315 ISSCSSLTSLSNELGNLTSLTTLNMARCLSLTTLSNELGNLTSLTTLDVSIFSSLTSLLN 374

Query: 237 ---RCPNLQFLEMPSCNIDGTRSKEQPS----SELKLKKCPRPESLPSGQCMFKSLTSLE 289
                 +L  L + SC+   + SK+  +    + L +  C    SLP+  C   SLT+ +
Sbjct: 375 ELGNLTSLTILNISSCSSLTSLSKKLGNLTSLTTLNISYCSSLTSLPNELCNLTSLTTFD 434

Query: 290 IIDCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +  C +   LP+ELGNL +L  L +   +++  LP  LG L  L+ L++  CS L  +  
Sbjct: 435 MWRCSSLISLPNELGNLTSLTTLDVSICSSMTSLPNELGNLTSLTTLDMWECSCLISLPI 494

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
            +  L S+  + IS CS+L          ++  G      + L ++  S L S P+ L  
Sbjct: 495 ELGNLTSLTILNISECSSLTSL-------LNELG-NLTSLTTLDVSIYSSLTSFPNELGN 546

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKC 466
             S   L I  C  L  LP+ELGNL +L  L +   + +  +P     L +L+  ++ +C
Sbjct: 547 LTSSNILNISSCSSLTSLPNELGNLTSLTTLNISYYSSLTSLPNEFGNLTSLTTFEIYEC 606

Query: 467 SSFESLPSRLYVSKSLTSL 485
           SS   LP++L    SLTS+
Sbjct: 607 SSLILLPNKLDNLTSLTSI 625



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 184/414 (44%), Gaps = 67/414 (16%)

Query: 67  LVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L  LK+ G S +T L +++ NL SL    +     LT LP+ L    +L  L++  CSSL
Sbjct: 238 LTILKISGYSSLTSLPNELGNLTSLTTSYMSRCSSLTSLPNELGNLTSLTTLNMWGCSSL 297

Query: 125 TETHSSIQYLNKLEVLDL----------DRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
           T   + +  L  L +L++          +   +LTSL T   ++ L    L     L NL
Sbjct: 298 TTLPNELGNLTSLTILNISSCSSLTSLSNELGNLTSLTTLNMARCLSLTTLSN--ELGNL 355

Query: 175 PKMTSCHLRSTLPLLGVGI-EELPSSIKCLSNIGELLIYSC----------KRLENISSS 223
             +T+         L V I   L S +  L N+  L I +           K+L N++S 
Sbjct: 356 TSLTT---------LDVSIFSSLTSLLNELGNLTSLTILNISSCSSLTSLSKKLGNLTS- 405

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                 L ++ I  C +L  L    CN+    + +       + +C    SLP+      
Sbjct: 406 ------LTTLNISYCSSLTSLPNELCNLTSLTTFD-------MWRCSSLISLPNELGNLT 452

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           SLT+L++  C +   LP+ELGNL +L  L + + + +  LP  LG L  L+ L +  CS 
Sbjct: 453 SLTTLDVSICSSMTSLPNELGNLTSLTTLDMWECSCLISLPIELGNLTSLTILNISECSS 512

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-------------- 388
           L  + + +  L S+ ++++S  S+L  FP     N+  S I  I S              
Sbjct: 513 LTSLLNELGNLTSLTTLDVSIYSSLTSFPN-ELGNLTSSNILNISSCSSLTSLPNELGNL 571

Query: 389 ---SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              + L ++  S L SLP+      SLT+ EI +C  L  LP++L NL +L  +
Sbjct: 572 TSLTTLNISYYSSLTSLPNEFGNLTSLTTFEIYECSSLILLPNKLDNLTSLTSI 625



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 122/264 (46%), Gaps = 49/264 (18%)

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
           C  L SLP+ L    SLT++ I +C  L  LP+ELGNL +L  L V              
Sbjct: 6   CPSLISLPNELGNLTSLTTMNISNCSSLISLPNELGNLTSLTTLDV-------------- 51

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-T 514
                     CSS  SLP+ L    SL +L++  C +   LP+E+GNL  L  L + G +
Sbjct: 52  --------SICSSLTSLPNELGNLTSLITLDMWGCSSLTSLPNELGNLTSLPTLNMGGCS 103

Query: 515 AIREVPESLGQLSSLE----WLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
           ++  +P  LG L+SL     W  L    L  +P  L+ LSSL ++ +   ++L  +P  L
Sbjct: 104 SLTSLPNELGNLTSLTTLNIWWCL---RLTSLPNELDNLSSLTTMDMWRCSSLTSLPNEL 160

Query: 570 DPLSSLKYLDLFE-NNLDRIPEYLRSFP-------------TSIPSEFTSLR----LSVD 611
             L SL  L++ E ++L  +P  L +               TS+PSE  +L     L++ 
Sbjct: 161 GNLISLTTLNISECSSLTSLPNELGNLTSLTTFIVSRCSSLTSLPSELGNLTSLSILNIS 220

Query: 612 LRNCLKLDPNELSEIIKDGWMKQS 635
             + L   PNEL  +     +K S
Sbjct: 221 GYSSLISLPNELGNLTSLTILKIS 244


>gi|334186704|ref|NP_193687.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658794|gb|AEE84194.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1744

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 207/804 (25%), Positives = 326/804 (40%), Gaps = 161/804 (20%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            ELR   W  +PL +      ++ LV L MP SK+ +LW   +NL  LKRI L  S  L  
Sbjct: 559  ELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVLKRITLSCSVQLLN 618

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            + +L  + N+E +DL  C  L     + Q L  L ++DL  CK + S P           
Sbjct: 619  VDELQYSPNIEKIDLKGCLELQSFPDTGQ-LQHLRIVDLSTCKKIKSFP----------- 666

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
                    K  P +   HL+      G GI +L SS+   S    L     ++LEN+SSS
Sbjct: 667  --------KVPPSIRKLHLQ------GTGIRDL-SSLNHSSESQRL----TRKLENVSSS 707

Query: 224  IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                                            +++     LKLK      SLP    +F+
Sbjct: 708  --------------------------------NQDHRKQVLKLKDSSHLGSLPD-IVIFE 734

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL-GQLALLSKLELKNCSE 342
            SL  L+   C   E   D  G  Q L RL +  TAI+E+P  L   ++ L KL+++NC  
Sbjct: 735  SLEVLDFSGCSELE---DIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCER 791

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLK------ 392
            L  +   +  +K +  +++S CSNL+   E+P       + G+ ++  PS++L+      
Sbjct: 792  LRDLPMGMSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPSTLLETLSEVV 851

Query: 393  ---LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
               L  C KL+ LP+ +   + L  L++  C KLE + D   N   L EL + GT IRE+
Sbjct: 852  LLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKLEIIVDLPLN---LIELYLAGTAIREL 908

Query: 450  PKSLA-QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P S+     L  L LK C+    LP  ++   +L  L+++D  N          LE    
Sbjct: 909  PPSIGDLALLDTLDLKNCNRLRHLPMEMH---NLNPLKVLDLSN-------CSELEVFTS 958

Query: 509  LTIKGTAIREVPESLGQLSSLEW-----------LVLSDNNLQIIPESLNQLSSLVSLKL 557
               K   +R  P  +   S L +           L L    LQ IPE +  + SL +L L
Sbjct: 959  SLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSLYKARLQYIPEEIRWMPSLKTLDL 1018

Query: 558  SNNNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFP----------TSIPSEFTSL 606
            S N    +P  +   S L  L L +  NL  +P+  RS              I  +F  L
Sbjct: 1019 SRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNAHGCSSLQLITPDFKQL 1078

Query: 607  RLSVDLRNCLKLDPNELSEIIKDGWM-------KQSVNGETYITKSMYFPGNEIPKWFRH 659
                   NC  L  + +SE++ +          +Q +      +  +  P +   K +  
Sbjct: 1079 PRYYTFSNCFGLPSHMVSEVLANAPAIVECRKPQQGLENALACSFCLPSPTSRDSKLYLQ 1138

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVC---DR 716
              + + I L    P   + L+GFA  V V+ S      H++     +C     VC   D+
Sbjct: 1139 PGSSTMIIL---NPKTRSTLVGFAILVEVSFSKD---FHDTAGLGFRC-----VCRWNDK 1187

Query: 717  RSEGY--DSYTSSYLGK--ISHVESDHVFL-------GSSIFAGENSCKRSDEFFF---- 761
            +   +  D+    +     +  +  DH+F+        S +F G+     +D   F    
Sbjct: 1188 KGHAHKRDNIFHCWAPGEVVPKINDDHMFVFFDLKMHPSILFEGDVFGILADLVVFEIFP 1247

Query: 762  ------HIDRSCCEVKKCGIHFVH 779
                  H+  SC  + KCG++ ++
Sbjct: 1248 VNKQEMHVGDSCT-ITKCGVYVIN 1270


>gi|357516579|ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355522600|gb|AET03054.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 216/834 (25%), Positives = 354/834 (42%), Gaps = 158/834 (18%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEG--VPFTELRYFEWHQFPLK--TLNIL 62
            ++ ++  +F  M  LRLL+           SLEG  +P  EL++ +W   PL+   LN L
Sbjct: 377  QVTLDTKSFEPMVNLRLLQIDN-------LSLEGKFLP-DELKWLQWRGCPLECIHLNTL 428

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLV--SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
              E  V     G K+  LW    + V  +L  ++L     L  +PDLS    LE ++L  
Sbjct: 429  PRELAVLDLSNGEKIKSLWGLKSHKVPETLMVMNLSDCYQLAAIPDLSWCLGLEKINLVN 488

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
            C +LT  H SI  L  L  L+L RC++L  LP+ +   K+L+ L+L  CS LK LP+   
Sbjct: 489  CINLTRIHESIGSLTTLLNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPENIG 548

Query: 180  CHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSC---KRLEN--------------- 219
              L+S  TL      I +LP SI  L+ +  L++ SC   +RL N               
Sbjct: 549  -MLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDSCLYLRRLPNCIGKLCSLLELSLNH 607

Query: 220  -----ISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
                 + +++  L+ LE + +  C +L  +     N++        +S +K         
Sbjct: 608  SGLQELHNTVGFLKSLEKLSLIGCKSLTLMPDSIGNLESLTELLASNSGIK--------E 659

Query: 275  LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
            LPS       L  L + DC    +LPD   NL ++  L +DGT+IR LP+ +G+L  L K
Sbjct: 660  LPSTIGSLSYLRILSVGDCKLLNKLPDSFKNLASIIELKLDGTSIRYLPDQIGELKQLRK 719

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
            LE+ NC  LE +  SI +L S+ ++ I N                               
Sbjct: 720  LEIGNCCNLESLPESIGQLASLTTLNIVN------------------------------- 748

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
                +  LP+S+ + ++L +L +  CK L++LP  +GNL++L  L + GT + ++P+S  
Sbjct: 749  --GNIRELPASIGLLENLVTLTLNQCKMLKQLPASVGNLKSLCHLMMMGTAMSDLPESFG 806

Query: 455  QLA-LSKLKLKKCSSFES----------LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             L+ L  L++ K     S          +PS       L+ L+    +   ++PDE   L
Sbjct: 807  MLSRLRTLRMAKNPDLVSKYAENTDSFVIPSSFCNLTLLSELDACAWRLSGKIPDEFEKL 866

Query: 504  EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
              LK L +       +P SL  LS L+ L L +    I   SL   SSL+ L   N    
Sbjct: 867  SLLKTLNLGQNNFHSLPSSLKGLSILKELSLPNCTELISLPSLP--SSLIMLNADNCYAL 924

Query: 564  RIPERLDPLSSLKYLDLFE-NNLDRIP--EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP 620
                 +  L SL+ L L     L  IP  E L+S      S   +    V  R       
Sbjct: 925  ETIHDMSNLESLEELKLTNCKKLIDIPGLECLKSLRRLYLSGCNACSSKVCKR------- 977

Query: 621  NELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM 680
              LS+++   +            +++  PG ++P+W   ++              ++K  
Sbjct: 978  --LSKVVLRNF------------QNLSMPGTKLPEWLSRET------------VSFSKRK 1011

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSE----GYDSYTSS-YLGKISHV 735
                  VV   +       S++ +   N    V D +++    G + +++S Y+G +   
Sbjct: 1012 NLELTSVVIGVIF------SIKQNNMKNQMSGVVDVQAKVLKLGEEIFSTSLYIGGVPRT 1065

Query: 736  ESDHVFLG---------SSIFAGENSC--KRSDEFFFHIDRSCCEVKKCGIHFV 778
            +  H++L          S++   +  C  KR+  F   +     E+KKCG+H +
Sbjct: 1066 DDQHIYLRRCNNYHPLVSALKDSDTVCVAKRNPPFDERL-----ELKKCGVHLI 1114


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 206/780 (26%), Positives = 325/780 (41%), Gaps = 194/780 (24%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
            +SEI I   +F+ MT+LRLL+     N  +  +L+ +P +EL++ +W   PL+ L  + L
Sbjct: 588  SSEITIPVESFAPMTKLRLLQI---NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDFL 643

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLV--SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                L  L +  S + Q+      +V  +LK + L+    L  +PDLS  + LE L    
Sbjct: 644  A-RQLSVLDLSESGIRQVQTLRNKMVDENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQ 702

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
            C+ L +   S+  L KL  LD  RC  L+     +   K L++L L GCS+L        
Sbjct: 703  CTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS------- 755

Query: 180  CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                            LP +I  ++++ ELL+     ++N+  SI +LQ           
Sbjct: 756  ---------------VLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ----------- 788

Query: 240  NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            NL+ L +  C I                                             + L
Sbjct: 789  NLEILSLRGCKI---------------------------------------------QEL 803

Query: 300  PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
            P  +G L++L +L +D TA++ LP  +G L  L  L L  C+ L  I  SI +LKS++ +
Sbjct: 804  PLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKL 863

Query: 360  EISNCSNLKGFPEIP--------FCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
             I N S ++  P  P        F   D   ++++PSS+ +LN         + +E+LP 
Sbjct: 864  FI-NGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPE 922

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
             +     +  LE+ +CK L+ LP  +G+++ L  L +EG+ I E+P+   +L  L +L++
Sbjct: 923  EIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 982

Query: 464  KKCSSFESLPS---------RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL----- 509
              C   + LP          RLY+ ++L S           LP+  GNL  L VL     
Sbjct: 983  SNCKMLKRLPESFGDLKSLHRLYMKETLVS----------ELPESFGNLSNLMVLEMLKK 1032

Query: 510  --------TIKGTA----IREVPESLGQLSSLE------WLVLSDNNLQIIPESLNQLSS 551
                     + GT+      EVP S  +L  LE      W +        IP+ L +LS 
Sbjct: 1033 PLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGK-----IPDDLEKLSC 1087

Query: 552  LVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIP---------EYLRSFPTSIPS 601
            L+ L L NN    +P  L  LS+L+ L L +   L R+P              F     S
Sbjct: 1088 LMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVS 1147

Query: 602  EFTSLRLSVDLR--NCLKL-DPNELSEI--IKDGWM------------KQSVNGETYITK 644
            + + L +  DL   NC K+ D   L  +  +K  +M            K+       + +
Sbjct: 1148 DLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMR 1207

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
            ++  PGN +P WF   S G       P      +L G    VVVA        ++  EDD
Sbjct: 1208 NLSLPGNRVPDWF---SQGPVTFSAQPN----RELRGVIIAVVVAL-------NDETEDD 1253


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 168/556 (30%), Positives = 254/556 (45%), Gaps = 86/556 (15%)

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             K+L  L    C   ++ P+  GN++ L  L +  TAI ELP  +G L  L  L+LK C 
Sbjct: 956  MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 1015

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV---- 390
             L+ +S+SI KLKS+E++ +S CS L+ FPE+           +DG+ IE +PSS+    
Sbjct: 1016 NLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLK 1075

Query: 391  ----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                L L KC  L SL + +C   SL +L +  C +L  LP  LG+L+ L +L  +GT I
Sbjct: 1076 GLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAI 1135

Query: 447  REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN----FMRLPDEIG 501
             + P S+  L  L  L    C      P+ L    SL S  ++   +     +RLP    
Sbjct: 1136 TQPPDSIVLLRNLQVLIYPGCKILA--PTSL---GSLFSFWLLHGNSSNGIGLRLPSSFS 1190

Query: 502  NLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
            +   L  L I    + E  +P  +  L SL+ L LS NN   IP  +++L++L  L+L  
Sbjct: 1191 SFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQ 1250

Query: 560  -NNLERIPERLDPLSSLKYLDLFE-----------NNLDRIPEYLRSFPTSIPSEFTSLR 607
              +L  IPE L P  S++ +D              N L  + ++L  +  S P E  S  
Sbjct: 1251 CQSLTGIPE-LPP--SVRDIDAHNCTALLPGSSSVNTLQGL-QFL-FYNCSKPVEDQS-- 1303

Query: 608  LSVDLRNCLKLDPNEL-------SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
             S D R  L++ P+         S +     M Q +     I  S+ FPG  IP+W  HQ
Sbjct: 1304 -SDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKL--LENIAFSIVFPGTGIPEWIWHQ 1360

Query: 661  STGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV---CDRR 717
            + GS+I ++ P     +  +GFA C V+          E + +   C+L   V    D +
Sbjct: 1361 NVGSSIKIQLPTDWHSDDFLGFALCSVL----------EHLPERIICHLNSDVFNYGDLK 1410

Query: 718  SEGYDSYTSSYLGKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFHIDR---- 765
              G+D +   + G I  V S+HV+LG           F   N     +  F    R    
Sbjct: 1411 DFGHDFH---WTGNI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSS 1465

Query: 766  SCCEVKKCGIHFVHAQ 781
            +   VKKCG+  ++A+
Sbjct: 1466 ASNVVKKCGVCLIYAE 1481



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 168/575 (29%), Positives = 254/575 (44%), Gaps = 113/575 (19%)

Query: 8    IQINPYTFSKMTELRLLK--------FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
            I I+   F+ M  LRLLK        F    NK  +      P  ELRY  WH +PL++L
Sbjct: 757  IHISTEAFAMMKNLRLLKIYWDLEYAFMREDNKVKLSKDFEFPSYELRYLHWHGYPLESL 816

Query: 60   NI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL----------- 107
             +  + E+LV L M  S + +LW+    +  L  I + +S+ L ++PD+           
Sbjct: 817  PLGFYAEDLVELDMCYSSLKRLWEGDLLVEKLNTIKVSFSQHLIEIPDMTYNTMGCFNGT 876

Query: 108  -----------------SLAQN---------------LEILDLGYCSSLTETHSSIQYLN 135
                             ++A+N                 ILD   CSSL E H SI  LN
Sbjct: 877  RNSSNSLFNQIPSQIPCAIARNSASALLRATTDCFLLRHILD--GCSSLLEVHPSIGKLN 934

Query: 136  KLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGI 193
            KL +L+L  CK L   P+ I  K L+ L   GCS LK  P +   ++ + L L      I
Sbjct: 935  KLILLNLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQG-NMENLLELYLASTAI 993

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL--------E 245
            EELPSSI  L+ +  L +  CK L+++S+SI KL+ LE++ +  C  L+           
Sbjct: 994  EELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDN 1053

Query: 246  MPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            +    +DGT  +  PSS         L L+KC    SL +G C   SL +L +  C    
Sbjct: 1054 LKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLN 1113

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS-SSIFKLKSV 356
             LP  LG+LQ L +L  DGTAI + P+ +  L  L  L    C  L   S  S+F    +
Sbjct: 1114 NLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLL 1173

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
                  N SN             G G+                  LPSS   F+SL++L+
Sbjct: 1174 H----GNSSN-------------GIGLR-----------------LPSSFSSFRSLSNLD 1199

Query: 417  IIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            I DCK +E  +P+ + +L +L++L +       +P  +++L  L  L+L +C S   +P 
Sbjct: 1200 ISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPE 1259

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
               +  S+  ++  +C   +     +  L+ L+ L
Sbjct: 1260 ---LPPSVRDIDAHNCTALLPGSSSVNTLQGLQFL 1291


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 204/391 (52%), Gaps = 39/391 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +L++ EWH +P K+L + L  +
Sbjct: 389 ESQWNIEAFSKMSRLRLLKI---NNVQLSEGPEDLS-NKLQFLEWHSYPSKSLPVGLQVD 444

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  LTK PDL+   NLE L L  C+SL+
Sbjct: 445 QLVELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLS 504

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS---CHL 182
           E H S+ +  KL+ ++L  CKS+  LP ++    LK  +L GCS L+  P +     C +
Sbjct: 505 EVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCSKLEKFPDIVGNMKCLM 564

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L G GI +L SS+  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+
Sbjct: 565 --VLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELK 622

Query: 243 FL--------EMPSCNIDGTRSKEQPSSELKL-----------KKCPRPESLPSGQCMFK 283
           ++         +   ++ GT  ++ P+S   L           K+   P SL SG C   
Sbjct: 623 YIPEKLGEVESLEEFDVSGTSIRQLPASIFLLKNLKVLSLDGFKRIVMPPSL-SGLC--- 678

Query: 284 SLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           SL  L +  C   E  LP+++G L +L  L +       LP+ + QL  L  L L++C+ 
Sbjct: 679 SLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTM 738

Query: 343 LEYISSSIFKLKS-VESIEISNCSNLKGFPE 372
           LE    S+ K+ S V+++ ++ C +LK  P+
Sbjct: 739 LE----SLPKVPSKVQTVCLNGCISLKTIPD 765



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 248/538 (46%), Gaps = 102/538 (18%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L+II+  N     + PD L  +  L  LI++G T++ E+   L     L  + L 
Sbjct: 464 KSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLV 522

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV- 390
           NC  +  + +++ ++ S++   +  CS L+ FP+I           +DG+GI ++ SS+ 
Sbjct: 523 NCKSIRILPNNL-EMGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMH 581

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                  L +N C  LES+PSS+   KSL  L++  C +L+ +P++LG +E+LEE  V G
Sbjct: 582 HLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSG 641

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFES--LPSRLYVSKSLTSLEIID-CKNFMR---LP 497
           T IR++P S+    L  LK+     F+   +P  L     L SLE++  C   +R   LP
Sbjct: 642 TSIRQLPASI--FLLKNLKVLSLDGFKRIVMPPSL---SGLCSLEVLGLCACNLREGALP 696

Query: 498 DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
           ++IG L  L+ L +       +P+S+ QL  LE LVL D  +    ESL ++ S V    
Sbjct: 697 EDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTML---ESLPKVPSKVQTVC 753

Query: 558 SNN--NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
            N   +L+ IP   DP+                     +  +S  SEF  L       NC
Sbjct: 754 LNGCISLKTIP---DPI---------------------NLSSSKISEFVCL-------NC 782

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQP 673
            +L  +   + +    +++   G +       +  PGNEIP WF HQS GS+IS++ P  
Sbjct: 783 WELYNHYGQDSMGLTLLERYFQGLSNPRPGFGIAIPGNEIPGWFNHQSKGSSISVQVPSW 842

Query: 674 TGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKIS 733
           +     MGF  CV                +    +LF   C  ++ G ++Y SS +  IS
Sbjct: 843 S-----MGFVACVAFGV------------NGESPSLF---CHFKANGRENYPSSPMC-IS 881

Query: 734 ----HVESDHVFLGSSIF-------AGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHA 780
                V SDH++L    F         ++    + E  FH  +   +VK CG+  + +
Sbjct: 882 CNSIQVLSDHIWLFYLSFDYLKELQEWQHGSFSNIELSFHSSQPGVKVKNCGVRLLSS 939


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 171/359 (47%), Gaps = 76/359 (21%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           ELRYF W  FP K+L      ENLV      SKV +LW   QNL++LK I+L  S+ LT+
Sbjct: 588 ELRYFHWDGFPSKSLPQDFSAENLVQFDFSESKVEKLWSGKQNLLNLKAINLSSSRCLTE 647

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LPDLS A NLE ++L  C SL    SS Q+L KL+ LDL  C +L +LP  I SK L++L
Sbjct: 648 LPDLSKAINLEYINLSGCESLKRVPSSFQHLEKLKCLDLTDCHNLITLPRRIDSKCLEQL 707

Query: 164 VLRGCSNLKNLPK----------------------------MTSCHLRSTLPLLG----- 190
            + GCSN++N P+                            +  C   +  P++      
Sbjct: 708 FITGCSNVRNCPETYADIGYLDLSGTSVEKVPLSIKLRQISLIGCKNITKFPVISENIRV 767

Query: 191 -----VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                  IEE+PSSI+ L+ +  L ++ CKRL  + SSI KL+FLE+  +  C  L    
Sbjct: 768 LLLDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSKL---- 823

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
                                      E+ P  +   KSL +L  +     ++LP  + +
Sbjct: 824 ---------------------------ETFPEIKRPMKSLKTL-YLGRTAIKKLPSSIRH 855

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            ++L  L +DG +++EL E    L +LS    ++C  LE ISS    L     + ++NC
Sbjct: 856 QKSLIFLELDGASMKELLELPPSLCILSA---RDCESLETISSGT--LSQSIRLNLANC 909



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 203/468 (43%), Gaps = 102/468 (21%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
            + L+ C  L+ +PSS    + L  L++ DC  L  LP  + + + LE+L + G + +R  
Sbjct: 660  INLSGCESLKRVPSSFQHLEKLKCLDLTDCHNLITLPRRIDS-KCLEQLFITGCSNVRNC 718

Query: 450  PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            P++ A +    L     +S E +P    +S  L  + +I CKN  + P    N+   +VL
Sbjct: 719  PETYADIGYLDLS---GTSVEKVP----LSIKLRQISLIGCKNITKFPVISENI---RVL 768

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
             +  TAI EVP S+  L+ L  L + D   L  +P S+ +L  L +  LS  + LE  PE
Sbjct: 769  LLDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSKLETFPE 828

Query: 568  RLDPLSSLKYLDLFENNLDRIPEYLR-------------------SFPTS---------- 598
               P+ SLK L L    + ++P  +R                     P S          
Sbjct: 829  IKRPMKSLKTLYLGRTAIKKLPSSIRHQKSLIFLELDGASMKELLELPPSLCILSARDCE 888

Query: 599  ----IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK-QSVN-GETYITKSMYFPGNE 652
                I S   S  + ++L NC + D N    I++D  +K QS N G+ +   S   PG+E
Sbjct: 889  SLETISSGTLSQSIRLNLANCFRFDQNA---IMEDMQLKIQSGNIGDMFQILS---PGSE 942

Query: 653  IPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV--------------ACSVSECCRH 698
            IP WF ++S GS+++++   P+  +KL   AFC++V              A ++   C  
Sbjct: 943  IPHWFINRSWGSSVAIQL--PSDCHKLKAIAFCLIVHHTVPLNDLLQEDKAINIKWQCHA 1000

Query: 699  ESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDE 758
            +S      C   D++     E Y+   S         +SDH+ L    +  ++  K SD+
Sbjct: 1001 KS----NNCEHDDIIFKTECEIYNFQDSKMR------DSDHMLLWHENWKEDSFSKYSDK 1050

Query: 759  ---FFFH-------IDRSC-----------CEVKKCGIHFVHAQRQRL 785
               F F+        DR+            C+VK CG++ +  +   L
Sbjct: 1051 EITFEFYPKAKAKSFDRNTSEMELREIEKHCKVKSCGVYHLFDENPHL 1098



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 22/203 (10%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           + L  C   + +PS     + L  L++ DC N   LP  + + + L +L I G + +R  
Sbjct: 660 INLSGCESLKRVPSSFQHLEKLKCLDLTDCHNLITLPRRIDS-KCLEQLFITGCSNVRNC 718

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNI 378
           PE    +  L   +L   S +E +  SI KL+ +  I    C N+  FP     I    +
Sbjct: 719 PETYADIGYL---DLSGTS-VEKVPLSI-KLRQISLI---GCKNITKFPVISENIRVLLL 770

Query: 379 DGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           D + IE +PSS+        L +  C +L  LPSS+C  K L +  +  C KLE  P+  
Sbjct: 771 DRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSKLETFPEIK 830

Query: 431 GNLEALEELRVEGTGIREVPKSL 453
             +++L+ L +  T I+++P S+
Sbjct: 831 RPMKSLKTLYLGRTAIKKLPSSI 853


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 193/384 (50%), Gaps = 36/384 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EW+ +P K+L      +
Sbjct: 487 EAQWNMKAFSKMSRLRLLKI---HNVQLSEGPEALS-NELRFLEWNSYPSKSLPACFQMD 542

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L K PDL+   NLE L L  C+SL+
Sbjct: 543 ELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCTSLS 602

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  KL+ ++L +CKS+  LP ++  + LK   L GCS L+  P +  + +  +
Sbjct: 603 EVHPSLAHHKKLQYVNLVKCKSIRILPNNLEMESLKVCTLDGCSKLEKFPDIVGNMNCLT 662

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+++
Sbjct: 663 VLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYI 722

Query: 245 --------EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPSGQCMFKSLTSL 288
                    +   ++ GT  ++ P+S   LK         C R   LPS    +  L  L
Sbjct: 723 PENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPS----YSGLCYL 778

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           E         LP+++G   +L  L +       LP+ + QL+ L  L LK+C  LE +  
Sbjct: 779 E-------GALPEDIGYSSSLRSLDLSQNNFGSLPKSINQLSELEMLVLKDCRMLESLPE 831

Query: 349 SIFKLKSVESIEISNCSNLKGFPE 372
              K   V+++ ++ C  LK  P+
Sbjct: 832 VPSK---VQTVNLNGCIRLKEIPD 852



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 165/330 (50%), Gaps = 41/330 (12%)

Query: 282 FKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
           +KS  +L+II+  N     + PD  G L  L  LI++G T++ E+   L     L  + L
Sbjct: 561 YKSAVNLKIINLSNSLNLIKTPDLTGILN-LESLILEGCTSLSEVHPSLAHHKKLQYVNL 619

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGIERIPSS 389
             C  +  + +++ +++S++   +  CS L+ FP+I          C +D +GI ++ SS
Sbjct: 620 VKCKSIRILPNNL-EMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLC-LDETGITKLCSS 677

Query: 390 V--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           +        L +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE  V
Sbjct: 678 IHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDV 737

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
            GT IR++P S+  L  L  L    C     LPS       L  LE         LP++I
Sbjct: 738 SGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPSY----SGLCYLE-------GALPEDI 786

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL-----VS 554
           G    L+ L +       +P+S+ QLS LE LVL D   L+ +PE  +++ ++     + 
Sbjct: 787 GYSSSLRSLDLSQNNFGSLPKSINQLSELEMLVLKDCRMLESLPEVPSKVQTVNLNGCIR 846

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFENN 584
           LK   + +E    ++     L  L+L+++N
Sbjct: 847 LKEIPDPIELSSSKISEFICLNCLELYDHN 876



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 29/252 (11%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L KC  +  LP++L M +SL    +  C KLE+ PD +GN+  L  L ++ TGI ++ 
Sbjct: 617 VNLVKCKSIRILPNNLEM-ESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLC 675

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+  L  L  L +  C + ES+PS +   KSL  L++  C     +P+ +G +E L+  
Sbjct: 676 SSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEF 735

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            + GT+IR++P S+  L +L+  VLS +  + I + L   S L  L+ +      +PE +
Sbjct: 736 DVSGTSIRQLPASIFLLKNLK--VLSSDGCERIAK-LPSYSGLCYLEGA------LPEDI 786

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFP-------------TSIPSEFTSLRLSVDLRNCL 616
              SSL+ LDL +NN   +P+ +                  S+P E  S   +V+L  C+
Sbjct: 787 GYSSSLRSLDLSQNNFGSLPKSINQLSELEMLVLKDCRMLESLP-EVPSKVQTVNLNGCI 845

Query: 617 KL----DPNELS 624
           +L    DP ELS
Sbjct: 846 RLKEIPDPIELS 857


>gi|449443196|ref|XP_004139366.1| PREDICTED: LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1,
           CONSTITUTIVE 1-like [Cucumis sativus]
          Length = 1253

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 202/423 (47%), Gaps = 53/423 (12%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQF-----PLKTLN 60
           + + ++   F  M  LRLL     +N     ++E +P   L++ +WH F     PL  L 
Sbjct: 505 TRLDVDSRAFRNMKNLRLLIV---RNARFSTNVEYLP-DNLKWIKWHGFSHRFLPLSFLK 560

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               +NLV L +  S +  L    + ++ L  +DL YS LL K+PD     NLE L L  
Sbjct: 561 ----KNLVGLDLRHSLIRNLGKGFKVIIYLPHVDLSYSSLLEKIPDFPATSNLEELYLNN 616

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L     S+  L KL  LDLD C +L  LP+ +  K LK L L  C  L+ LP  ++ 
Sbjct: 617 CTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLMLKSLKVLKLAYCKKLEKLPDFSTA 676

Query: 181 ------------HLR---------STLPLLGVG----IEELPSSIKCLSNIGELLIYSCK 215
                       +LR         S L  L +G    +E+LPS +  L ++  L +  CK
Sbjct: 677 SNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYL-TLKSLEYLNLAHCK 735

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
           +LE I      L  L+S+ + +C NL+ +     +++   +       L L++C   E L
Sbjct: 736 KLEEIPDFSSALN-LKSLYLEQCTNLRVIHESIGSLNSLVT-------LDLRQCTNLEKL 787

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
           PS     KSL   E+  C   E  P    N+++L  L +D TAIRELP  +G L  L  L
Sbjct: 788 PS-YLKLKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALLVL 846

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC--NIDGSG---IERIPSSV 390
            L  C+ L  + S+I+ L S+ ++++ NC  L+  P +P C   +D +G   + R P ++
Sbjct: 847 NLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHCIQKMDATGCTLLGRSPDNI 906

Query: 391 LKL 393
           + +
Sbjct: 907 MDI 909



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 156/324 (48%), Gaps = 55/324 (16%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +E++P      SN+ EL + +C  L  I  S+  L  L ++ +  C NL  +++PS    
Sbjct: 597 LEKIPD-FPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNL--IKLPS---- 649

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALN 310
                                       M KSL  L++  C   E+LPD     NL+ L 
Sbjct: 650 --------------------------YLMLKSLKVLKLAYCKKLEKLPDFSTASNLEKL- 682

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
             + + T +R + + +G L+ L  L+L  CS LE + S +  LKS+E + +++C  L+  
Sbjct: 683 -YLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYL-TLKSLEYLNLAHCKKLEEI 740

Query: 371 PEIPFC-NIDGSGIER------IPSSV--------LKLNKCSKLESLPSSLCMFKSLTSL 415
           P+     N+    +E+      I  S+        L L +C+ LE LPS L + KSL   
Sbjct: 741 PDFSSALNLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLKL-KSLRHF 799

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
           E+  C KLE  P    N+++L  L ++ T IRE+P S+  L AL  L L  C++  SLPS
Sbjct: 800 ELSGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPS 859

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPD 498
            +Y+  SL +L++ +CK    +P+
Sbjct: 860 TIYLLMSLWNLQLRNCKFLQEIPN 883



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 188/383 (49%), Gaps = 46/383 (12%)

Query: 297 ERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           E++PD     NL+ L   + + T +R +P+ +  L  L  L+L +CS L  + S +  LK
Sbjct: 598 EKIPDFPATSNLEEL--YLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLM-LK 654

Query: 355 SVESIEISNCSNLKGFPEIPFC-NIDG------SGIERIPSSV--------LKLNKCSKL 399
           S++ ++++ C  L+  P+     N++       + +  I  S+        L L KCS L
Sbjct: 655 SLKVLKLAYCKKLEKLPDFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNL 714

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-A 457
           E LPS L + KSL  L +  CKKLE +PD    L  L+ L +E  T +R + +S+  L +
Sbjct: 715 EKLPSYLTL-KSLEYLNLAHCKKLEEIPDFSSALN-LKSLYLEQCTNLRVIHESIGSLNS 772

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L  L L++C++ E LPS L + KSL   E+  C      P    N++ L  L +  TAIR
Sbjct: 773 LVTLDLRQCTNLEKLPSYLKL-KSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIR 831

Query: 518 EVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIP------ERL 569
           E+P S+G L++L  L L    NL  +P ++  L SL +L+L N   L+ IP      +++
Sbjct: 832 ELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHCIQKM 891

Query: 570 DPL-------SSLKYLDLFENNLD-RIPEYLRSF---PTSIPSEFTSLRLSVDLRNCLKL 618
           D         S    +D+  +  D  + ++ R F    T IP  F+   +S  +R   + 
Sbjct: 892 DATGCTLLGRSPDNIMDIISSKQDVALGDFTREFILMNTGIPEWFSYQSISNSIRVSFRH 951

Query: 619 DPNELSEIIKDGWMKQSVNGETY 641
           D N   E I   +    V G++Y
Sbjct: 952 DLN--MERILATYATLQVVGDSY 972



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 59/341 (17%)

Query: 310 NRLIIDGTAIRELPEGLGQLALLS-KLELKNCSELEYISSSIFKLKSVESIEISNC---S 365
           +RL +    ++   +  G +A+ + KL+L N + L+  S +   +K++  + + N    +
Sbjct: 473 SRLWLVHDVLKVFADNSGTIAVKAIKLDLSNPTRLDVDSRAFRNMKNLRLLIVRNARFST 532

Query: 366 NLKGFPE-IPFCNIDGSGIERIPSSVLKLN------KCSKLESLPSSLCMFKSLTSLEII 418
           N++  P+ + +    G     +P S LK N      + S + +L     +   L  +++ 
Sbjct: 533 NVEYLPDNLKWIKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKGFKVIIYLPHVDLS 592

Query: 419 DCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
               LE++PD       LEEL +   T +R +PKS+  L                     
Sbjct: 593 YSSLLEKIPD-FPATSNLEELYLNNCTNLRTIPKSVVSLG-------------------- 631

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD- 536
               L +L++  C N ++LP  +  L+ LKVL +      E        S+LE L L + 
Sbjct: 632 ---KLLTLDLDHCSNLIKLPSYL-MLKSLKVLKLAYCKKLEKLPDFSTASNLEKLYLKEC 687

Query: 537 NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEY--- 591
            NL++I +S+  LS LV+L L   +NLE++P  L  L SL+YL+L     L+ IP++   
Sbjct: 688 TNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYL-TLKSLEYLNLAHCKKLEEIPDFSSA 746

Query: 592 -------------LRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
                        LR    SI S   SL +++DLR C  L+
Sbjct: 747 LNLKSLYLEQCTNLRVIHESIGS-LNSL-VTLDLRQCTNLE 785


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 223/509 (43%), Gaps = 76/509 (14%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNKCMVHSLE-------GVPFTELRYFEWHQFPLKT 58
           +IQ+N   +  M +LR LK + G  +  M  + +         P  ELRY  W  +PL+T
Sbjct: 349 DIQVNKKVYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDCEFPSQELRYLYWEAYPLQT 408

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDD---------VQNLVSLKRIDLKYSKLLTKLPDL- 107
           L +  + ENLV L M  S + QLW           + ++ +L+ + L + + L K P++ 
Sbjct: 409 LPSNFNGENLVELHMRNSTIKQLWKGRKIAHQNAKLSSMPNLEELYLAFCERLKKFPEIR 468

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI----HSKYLK-- 161
               +L IL LG  S + E  SSI+YL  LE L L  C++      +     H ++++  
Sbjct: 469 GNMGSLRILYLGQ-SGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAK 527

Query: 162 ------------------RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
                              L L  CSNL+N P++        L L    I+ELP++  CL
Sbjct: 528 KADIQELPNSFGYLESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNAFGCL 587

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
             +  L +  C   E       ++Q + S+R  R       E+P C+I G  +K +   +
Sbjct: 588 EALQFLYLSGCSNFEEFP----EIQNMGSLRFLRLNETAIKELP-CSI-GHLTKLR---D 638

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C    SLP+  C  KSL  L I  C N    P+ + +++ L  L++  T I ELP
Sbjct: 639 LNLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELP 698

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP------------ 371
             +  L  L +L L NC  L  + +SI  L  + S+ + NCS L   P            
Sbjct: 699 PSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRR 758

Query: 372 -EIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKL 423
            ++  CN+       IPS +  L+         S +  +P+++    +L +L +  C+ L
Sbjct: 759 LDLAGCNLMKGA---IPSDLWCLSSLRFLDVSESPIPCIPTNIIQLSNLRTLRMNHCQML 815

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKS 452
           E +P+    LE LE       G    P S
Sbjct: 816 EEIPELPSRLEVLEAPGCPHVGTLSTPSS 844



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 38/329 (11%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC--- 340
           +L  L +  C   ++ P+  GN+ +L  L +  + I+E+P  +  L  L  L L  C   
Sbjct: 449 NLEELYLAFCERLKKFPEIRGNMGSLRILYLGQSGIKEIPSSIEYLPALEFLTLWGCRNF 508

Query: 341 --------------------SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG 380
                               ++++ + +S   L+S +++ + +CSNL+ FPEI       
Sbjct: 509 DKFQDNFGNLRHRRFIQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEIHV----- 563

Query: 381 SGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
             ++R+   +L LN  + ++ LP++    ++L  L +  C   E  P E+ N+ +L  LR
Sbjct: 564 --MKRL--EILWLNN-TAIKELPNAFGCLEALQFLYLSGCSNFEEFP-EIQNMGSLRFLR 617

Query: 441 VEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           +  T I+E+P S+  L  L  L L+ C +  SLP+ +   KSL  L I  C N +  P+ 
Sbjct: 618 LNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEI 677

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
           + ++++L  L +  T I E+P S+  L  L  LVL++  NL  +P S+  L+ L SL + 
Sbjct: 678 MEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVR 737

Query: 559 N-NNLERIPERLDPLS-SLKYLDLFENNL 585
           N + L  +P+ L  L   L+ LDL   NL
Sbjct: 738 NCSKLHNLPDNLRSLQCCLRRLDLAGCNL 766



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 119/237 (50%), Gaps = 33/237 (13%)

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
           S++ +L K  K+    + L    +L  L +  C++L++ P+  GN+ +L  L +  +GI+
Sbjct: 426 STIKQLWKGRKIAHQNAKLSSMPNLEELYLAFCERLKKFPEIRGNMGSLRILYLGQSGIK 485

Query: 448 EVPKSLAQL-ALSKLKLKKCSSF-----------------------ESLPSRLYVSKSLT 483
           E+P S+  L AL  L L  C +F                       + LP+     +S  
Sbjct: 486 EIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADIQELPNSFGYLESPQ 545

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQII 542
           +L + DC N    P EI  ++ L++L +  TAI+E+P + G L +L++L LS  +N +  
Sbjct: 546 NLCLDDCSNLENFP-EIHVMKRLEILWLNNTAIKELPNAFGCLEALQFLYLSGCSNFEEF 604

Query: 543 PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
           PE +  + SL  L+L+   ++ +P  +  L+ L+ L+L EN  +     LRS P SI
Sbjct: 605 PE-IQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNL-ENCKN-----LRSLPNSI 654


>gi|168032797|ref|XP_001768904.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679816|gb|EDQ66258.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 503

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 231/504 (45%), Gaps = 59/504 (11%)

Query: 79  QLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKL 137
            L  ++ NL SL  +D+     LT LP +L    +L IL +  CS LT   + +     L
Sbjct: 3   SLSKELSNLTSLIALDMHRCSSLTSLPKELENLTSLTILYINGCSRLTSLSNELGNFKFL 62

Query: 138 EVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
            +L++  C SL SL   + +   L  L +RGC NL +LP    C+L S   L   G E L
Sbjct: 63  TILNISNCYSLISLLYELCYLTSLTTLNIRGCKNLMSLPN-EFCNLTSLTTLNMRGCENL 121

Query: 197 ---PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL--------E 245
              P+ +    ++  L +  C  L ++ + +     L ++ ++ C NL  L         
Sbjct: 122 ISLPNELGNFISLTTLNMNGCSSLTSLPNELGNFTSLTTLNMNGCSNLTSLPTELGHLTS 181

Query: 246 MPSCNIDGTRSKEQPSSELK---------LKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
           + + N++   S    +++L          + +C R  SLP+    F+SLT  +I D  + 
Sbjct: 182 LTTLNMNEYFSLTSLTNQLDNLTSLTTLYMNRCSRLISLPNELETFQSLTIFDISDYYSL 241

Query: 297 ERLPDELGNLQALNRLIIDGTA-------------------IRE------LPEGLGQLAL 331
             L +EL  L +L  L ++G +                   IRE      L   L  L  
Sbjct: 242 TTLLNELDYLTSLTTLNMNGCSSLILLLNELSNLTSLTTLNIREYKNLTSLLNELDNLTS 301

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L+ L++  C     +S+ +  LKS+   +IS C NL   P       + S +  +  + L
Sbjct: 302 LTILDINRCFSFTSLSNKLANLKSLTIFDISYCFNLISLPN------ELSNLTSL--TTL 353

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
            +N C +L SLP+ L  FKSLT  +I  C     LP++L NL +L  L + G   +  +P
Sbjct: 354 NINGCIRLTSLPNELDNFKSLTIFDIGYCFNFILLPNKLNNLTSLTTLNMRGYKSLTSLP 413

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           K      +L+ L +  C+SF SLP+ L    SLT+L I  CKN + L +E+GNL  L  L
Sbjct: 414 KEFGNFTSLTTLNINNCNSFASLPNELNNLTSLTTLNIRGCKNLILLANELGNLTSLTTL 473

Query: 510 TIKGTAIR-EVPESLGQLSSLEWL 532
            I G +I   +P  LG L SL  L
Sbjct: 474 NINGCSILISLPNDLGNLISLTTL 497



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 177/417 (42%), Gaps = 74/417 (17%)

Query: 56  LKTLNILHWENLVSL-------------KMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLL 101
           L TLN+   ENL+SL              M G S +T L +++ N  SL  +++     L
Sbjct: 110 LTTLNMRGCENLISLPNELGNFISLTTLNMNGCSSLTSLPNELGNFTSLTTLNMNGCSNL 169

Query: 102 TKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--- 157
           T LP +L    +L  L++    SLT   + +  L  L  L ++RC  L SLP  + +   
Sbjct: 170 TSLPTELGHLTSLTTLNMNEYFSLTSLTNQLDNLTSLTTLYMNRCSRLISLPNELETFQS 229

Query: 158 -------------------KYLKRLV---LRGCSNL-------KNLPKMTSCHLRSTLPL 188
                               YL  L    + GCS+L        NL  +T+ ++R     
Sbjct: 230 LTIFDISDYYSLTTLLNELDYLTSLTTLNMNGCSSLILLLNELSNLTSLTTLNIRE---- 285

Query: 189 LGVGIEELPSSIKCLSNIGELLIYS---CKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                + L S +  L N+  L I     C    ++S+ +  L+ L    I  C NL  + 
Sbjct: 286 ----YKNLTSLLNELDNLTSLTILDINRCFSFTSLSNKLANLKSLTIFDISYCFNL--IS 339

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
           +P+       S     + L +  C R  SLP+    FKSLT  +I  C NF  LP++L N
Sbjct: 340 LPN-----ELSNLTSLTTLNINGCIRLTSLPNELDNFKSLTIFDIGYCFNFILLPNKLNN 394

Query: 306 LQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           L +L  L + G  ++  LP+  G    L+ L + NC+    + + +  L S+ ++ I  C
Sbjct: 395 LTSLTTLNMRGYKSLTSLPKEFGNFTSLTTLNINNCNSFASLPNELNNLTSLTTLNIRGC 454

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
            NL     I   N  G+       + L +N CS L SLP+ L    SLT+L    C 
Sbjct: 455 KNL-----ILLANELGNLTSL---TTLNINGCSILISLPNDLGNLISLTTLYTNGCS 503


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 238/516 (46%), Gaps = 59/516 (11%)

Query: 8    IQINPYTFSKMTELRLLKF-----CGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNIL 62
            +  +   F+KMT LRLLK      C    +   + +     +++R     +FP       
Sbjct: 547  VSFDSNVFTKMTSLRLLKVHSGVDCYEDMEEKHYDVVKKNASKMRLGPDFEFP-----SY 601

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
            H   LV L +  S + QLW + + L  L+ IDL YS+ L ++ + S   NLE L L  C 
Sbjct: 602  HLRKLVELHLNWSNIKQLWQENKYLEGLRVIDLSYSRELIQMLEFSSMPNLERLILQGCL 661

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSC 180
            SL + H S+  + KL  L L  C +L  LP SI   + L+ L L  CS  +  P K  + 
Sbjct: 662  SLIDIHPSVGNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNM 721

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                 L L    I++LP+SI  L ++  L +  C + +        ++ L+ +       
Sbjct: 722  KSLKELFLRNTAIKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMKSLKEL------- 774

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                     ++  T  K+ P S   L                +SL +L++ DC  FE+ P
Sbjct: 775  ---------SLINTAIKDLPDSIGDL----------------ESLETLDLSDCSKFEKFP 809

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            ++ GN+++L  L +  TAI++LP  +G L  L  L+L   S  E        +KS+E + 
Sbjct: 810  EKGGNMKSLKELFLIKTAIKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLI 869

Query: 361  ISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            + N S +K  P+          I  + S   L L+ CS+ E  P      KSL +L +I+
Sbjct: 870  LKN-SAIKDLPD---------SIGDLESLETLDLSDCSRFEKFPEKGGNMKSLENLFLIN 919

Query: 420  CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
               ++ LPD +G+LE+LE L +   +   + P+    +  L KL L++ ++ E L S + 
Sbjct: 920  T-AIKDLPDSIGDLESLEILDLSDCSKFEKFPEMKRGMKHLYKLNLRR-TTIEELTSSID 977

Query: 478  VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                L +L I +CK+   LPD I  L++L+ L + G
Sbjct: 978  NLSGLRNLIIAECKSLRSLPDNISRLKFLETLILSG 1013



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 157/651 (24%), Positives = 272/651 (41%), Gaps = 149/651 (22%)

Query: 225  FKLQFLESIRIHRCPNLQFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQC 280
            +  + ++ +     PNL+ L +  C    +I  +    +  + L L+ C   + LP    
Sbjct: 636  YSRELIQMLEFSSMPNLERLILQGCLSLIDIHPSVGNMKKLTTLSLRGCDNLKDLPDSIG 695

Query: 281  MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
              +SL  L++ DC  FE+ P++ GN+++L  L +  TAI++LP  +G L  L  L L +C
Sbjct: 696  DLESLEILDLTDCSRFEKFPEKGGNMKSLKELFLRNTAIKDLPNSIGNLESLKILYLTDC 755

Query: 341  SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
            S+ +        +KS++ + + N +                                 ++
Sbjct: 756  SKFDKFPEKGGNMKSLKELSLINTA---------------------------------IK 782

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LS 459
             LP S+   +SL +L++ DC K E+ P++ GN+++L+EL +  T I+++P S+  L  L 
Sbjct: 783  DLPDSIGDLESLETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTAIKDLPNSIGDLGSLE 842

Query: 460  KLKLKKCSSFE-----------------------SLPSRLYVSKSLTSLEIIDCKNFMRL 496
             L L   S FE                        LP  +   +SL +L++ DC  F + 
Sbjct: 843  VLDLSYYSRFEKFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLESLETLDLSDCSRFEKF 902

Query: 497  PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL 555
            P++ GN++ L+ L +  TAI+++P+S+G L SLE L LSD +  +  PE    +  L  L
Sbjct: 903  PEKGGNMKSLENLFLINTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEMKRGMKHLYKL 962

Query: 556  KLSNNNLERIPERLDPLSSLKYLDLFE--------NNLDRIPEYLRSFPTSIPSEFTSLR 607
             L    +E +   +D LS L+ L + E        +N+ R+ ++L +   S  S+     
Sbjct: 963  NLRRTTIEELTSSIDNLSGLRNLIIAECKSLRSLPDNISRL-KFLETLILSGCSDLWEGL 1021

Query: 608  LSVDLRNCLKLD-------------PNELSEIIKD-----------------GWMKQSVN 637
            +S  L N  KL+             P+ L EI                     W+K +  
Sbjct: 1022 ISNQLCNLGKLNISQCKMAGQILELPSSLEEIDAHDCRSKEDLSSLLWICHLNWLKSTTE 1081

Query: 638  GETYITKSMYFPGNEI-PKWFRHQSTGSTISLKTPQPTGYNK---LMGFAF-CVVVACSV 692
                       P N   P+W R+Q+ G+ ++  T  PT + +    +GF   CV  +   
Sbjct: 1082 ELKCWKLRAIIPENSGNPEWIRYQNLGTEVT--TELPTNWYEDPDFLGFVVSCVCRSIPT 1139

Query: 693  SECCRH----------ESVEDDRKCNLFDVVCDRRSEGYDS---------YTSSYLGKIS 733
            S+   +             E   KC LFD  C  +  G +          Y    + K  
Sbjct: 1140 SDGHSYFLGCALKLHGNGFEFKDKC-LFDCQC--KCHGINDLVDQVWVWWYPKIAIPKEH 1196

Query: 734  HVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQRQR 784
            H +  H+   ++ F G+                  E+KKCGI+ + A  Q+
Sbjct: 1197 HHKYTHI---NASFRGK----------------WTEIKKCGINLIFAGDQQ 1228


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 197/373 (52%), Gaps = 25/373 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM++LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 325 EAQWNMKAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 380

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V LK I+L  S  L+K PDL+   NLE L L  C SL+
Sbjct: 381 ELVELHMANSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLESLILEGCISLS 440

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT---SCHL 182
           E H S+    KL+ ++L  C+S+  LP+++  + LK   L GCS L+N P +    +C +
Sbjct: 441 EVHPSLGRHKKLQYVNLINCRSIRILPSNLEMESLKFFTLDGCSKLENFPDIVGNMNCLM 500

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
           +  L L   GI EL  SI+ +  +  L + +CK+LE+IS SI  L+ L+ + +  C  L+
Sbjct: 501 K--LCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELK 558

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT--SLEIIDCPNFERLP 300
                  NI G   K +   E  +        LP+   + K+L   SL+ +   N   LP
Sbjct: 559 -------NIPGNLEKVESLEEFDVSGTS-IRQLPASIFLLKNLAVLSLDGLRACNLRALP 610

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS-VESI 359
           +++G L +L  L +       LP  + QL+ L KL L++C+ LE    S+ ++ S V+++
Sbjct: 611 EDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLE----SLLEVPSKVQTV 666

Query: 360 EISNCSNLKGFPE 372
            ++ C +LK  P+
Sbjct: 667 NLNGCISLKTIPD 679



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 227/527 (43%), Gaps = 114/527 (21%)

Query: 282 FKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
           +KS   L+II+  N     + PD L  +  L  LI++G  ++ E+   LG+   L  + L
Sbjct: 399 YKSAVKLKIINLSNSLYLSKSPD-LTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNL 457

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIERIPSS 389
            NC  +  + S++ +++S++   +  CS L+ FP+I          C +D +GI  +  S
Sbjct: 458 INCRSIRILPSNL-EMESLKFFTLDGCSKLENFPDIVGNMNCLMKLC-LDRTGIAELSPS 515

Query: 390 --------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                   VL +N C KLES+  S+   KSL  L++  C +L+ +P  L  +E+LEE  V
Sbjct: 516 IRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDV 575

Query: 442 EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            GT IR++P S+  L                      + ++ SL+ +   N   LP++IG
Sbjct: 576 SGTSIRQLPASIFLLK---------------------NLAVLSLDGLRACNLRALPEDIG 614

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN- 560
            L  LK L +       +P S+ QLS LE LVL D  +    ESL ++ S V     N  
Sbjct: 615 CLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTML---ESLLEVPSKVQTVNLNGC 671

Query: 561 -NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL- 618
            +L+ IP   DP+                        +S  SEF  L       +C +L 
Sbjct: 672 ISLKTIP---DPI---------------------KLSSSQRSEFMCL-------DCWELY 700

Query: 619 ---DPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
                + +  I+ + +++   N        +  PGNEIP WF HQS  S+IS++ P  + 
Sbjct: 701 EHNGQDSMGSIMLERYLQGLSNPRPGFR--IVVPGNEIPGWFNHQSKESSISVQVPSWS- 757

Query: 676 YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHV 735
               MGF  CV  +                +  LF   C  ++ G ++Y S        +
Sbjct: 758 ----MGFVACVAFSAY-------------GESPLF---CHFKANGRENYPSPMCLSCKVL 797

Query: 736 ESDHVFLGSSIF-------AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
            SDH++L    F         ++    + E  FH      +VK CG+
Sbjct: 798 FSDHIWLFYLSFDYLKELKEWQHGSFSNIELSFHSYERGVKVKNCGV 844


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1378

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 197/373 (52%), Gaps = 25/373 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM++LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 609 EAQWNMKAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 664

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V LK I+L  S  L+K PDL+   NLE L L  C SL+
Sbjct: 665 ELVELHMANSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLESLILEGCISLS 724

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT---SCHL 182
           E H S+    KL+ ++L  C+S+  LP+++  + LK   L GCS L+N P +    +C +
Sbjct: 725 EVHPSLGRHKKLQYVNLINCRSIRILPSNLEMESLKFFTLDGCSKLENFPDIVGNMNCLM 784

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
           +  L L   GI EL  SI+ +  +  L + +CK+LE+IS SI  L+ L+ + +  C  L+
Sbjct: 785 K--LCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELK 842

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT--SLEIIDCPNFERLP 300
                  NI G   K +   E  +        LP+   + K+L   SL+ +   N   LP
Sbjct: 843 -------NIPGNLEKVESLEEFDVSGTS-IRQLPASIFLLKNLAVLSLDGLRACNLRALP 894

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS-VESI 359
           +++G L +L  L +       LP  + QL+ L KL L++C+ LE    S+ ++ S V+++
Sbjct: 895 EDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLE----SLLEVPSKVQTV 950

Query: 360 EISNCSNLKGFPE 372
            ++ C +LK  P+
Sbjct: 951 NLNGCISLKTIPD 963



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 181/405 (44%), Gaps = 86/405 (21%)

Query: 282  FKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
            +KS   L+II+  N     + PD L  +  L  LI++G  ++ E+   LG+   L  + L
Sbjct: 683  YKSAVKLKIINLSNSLYLSKSPD-LTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNL 741

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIERIPSS 389
             NC  +  + S++ +++S++   +  CS L+ FP+I          C +D +GI  +  S
Sbjct: 742  INCRSIRILPSNL-EMESLKFFTLDGCSKLENFPDIVGNMNCLMKLC-LDRTGIAELSPS 799

Query: 390  --------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                    VL +N C KLES+  S+   KSL  L++  C +L+ +P  L  +E+LEE  V
Sbjct: 800  IRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDV 859

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
             GT IR++P S+  L                      + ++ SL+ +   N   LP++IG
Sbjct: 860  SGTSIRQLPASIFLLK---------------------NLAVLSLDGLRACNLRALPEDIG 898

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN- 560
             L  LK L +       +P S+ QLS LE LVL D  +    ESL ++ S V     N  
Sbjct: 899  CLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTML---ESLLEVPSKVQTVNLNGC 955

Query: 561  -NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL- 618
             +L+ IP   DP+                        +S  SEF  L       +C +L 
Sbjct: 956  ISLKTIP---DPI---------------------KLSSSQRSEFMCL-------DCWELY 984

Query: 619  ---DPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
                 + +  I+ + +++   N        +  PGNEIP WF HQ
Sbjct: 985  EHNGQDSMGSIMLERYLQGLSNPRPGFR--IVVPGNEIPGWFNHQ 1027


>gi|251748502|gb|ACT11053.1| TIR-NB-LRR resistance protein [Arachis diogoi]
          Length = 1095

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 136/248 (54%), Gaps = 16/248 (6%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHW 64
           +Q++P  FSKM++LR L F G ++  ++H  EG+    + LRY  W  +PLK+L      
Sbjct: 592 MQLSPQVFSKMSKLRFLDFYGERH--LLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFSA 649

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E LV L++P S+V +LW  +QNLV+LK +   YS  L + PDLS A NLEILD  YC  L
Sbjct: 650 EKLVILELPYSQVEKLWYGIQNLVNLKVLKAPYSSQLKEFPDLSKATNLEILDFKYCLRL 709

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KMTSC 180
           T  H S+  LNKLE LDL  C  L  L T+ H K L+ L L  C  L         MT  
Sbjct: 710 TRVHPSVFSLNKLETLDLSWCSQLAKLETNAHLKSLRYLSLYHCKRLNKFSVISENMTEL 769

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            LR T       I ELPSS  C S + +L + + +  +  + S+  L  L+ + I  C N
Sbjct: 770 DLRHT------SIRELPSSFGCQSKLEKLHLANSEVKKMPADSMKLLTSLKYLDISDCKN 823

Query: 241 LQFL-EMP 247
           LQ L E+P
Sbjct: 824 LQTLPELP 831



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 165/396 (41%), Gaps = 69/396 (17%)

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID-- 379
            PEGL QL           S L Y+  + + LKS+        +      E+P+  ++  
Sbjct: 619 FPEGLQQLP----------SRLRYLRWTYYPLKSLPK---KFSAEKLVILELPYSQVEKL 665

Query: 380 GSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
             GI+ + +  VLK    S+L+  P         T+LEI+D K   RL            
Sbjct: 666 WYGIQNLVNLKVLKAPYSSQLKEFPD----LSKATNLEILDFKYCLRL------------ 709

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
                   R  P   +   L  L L  CS    L +  ++ KSL  L +  CK   RL  
Sbjct: 710 -------TRVHPSVFSLNKLETLDLSWCSQLAKLETNAHL-KSLRYLSLYHCK---RLNK 758

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP-ESLNQLSSLVSLKL 557
                E +  L ++ T+IRE+P S G  S LE L L+++ ++ +P +S+  L+SL  L +
Sbjct: 759 FSVISENMTELDLRHTSIRELPSSFGCQSKLEKLHLANSEVKKMPADSMKLLTSLKYLDI 818

Query: 558 SN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL 616
           S+  NL+ +PE   PL S++ LD   +N   +   L  FP +   +    +      NCL
Sbjct: 819 SDCKNLQTLPEL--PL-SIETLD--ADNCTSLKAVL--FPNA-SEQLKENKKKAVFWNCL 870

Query: 617 KLDPNELSEIIKDGWMKQSVNGETYIT---------------KSMYFPGNEIPKWFRHQS 661
           KL+   L+ +  + ++        Y++                S  +P +++P W  +Q+
Sbjct: 871 KLENQFLNAVALNAYINMVRFSNQYLSAIGHDNVDNSNEDPEASYVYPRSKVPNWLEYQT 930

Query: 662 TGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCR 697
               +++       Y   +GF  C +V    SE  R
Sbjct: 931 NMDHLTVNL-SSAPYAPKLGFILCFIVPAVPSEGFR 965



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 27/249 (10%)

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN-LKNLPKMTSCHLRSTLPLLGVG 192
           ++KL  LD    + L   P  +     +   LR     LK+LPK  S      L L    
Sbjct: 602 MSKLRFLDFYGERHLLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFSAEKLVILELPYSQ 661

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +E+L   I+ L N+  L             + +  Q  E   + +  NL+ L+   C + 
Sbjct: 662 VEKLWYGIQNLVNLKVL------------KAPYSSQLKEFPDLSKATNLEILDFKYC-LR 708

Query: 253 GTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
            TR    PS         L L  C +   L +     KSL  L +  C    +      N
Sbjct: 709 LTRV--HPSVFSLNKLETLDLSWCSQLAKLETN-AHLKSLRYLSLYHCKRLNKFSVISEN 765

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           +  L+   +  T+IRELP   G  + L KL L N    +  + S+  L S++ ++IS+C 
Sbjct: 766 MTELD---LRHTSIRELPSSFGCQSKLEKLHLANSEVKKMPADSMKLLTSLKYLDISDCK 822

Query: 366 NLKGFPEIP 374
           NL+  PE+P
Sbjct: 823 NLQTLPELP 831


>gi|224104273|ref|XP_002333965.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222839252|gb|EEE77603.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1033

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 201/392 (51%), Gaps = 39/392 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 304 EAQWNMEAFSKMSRLRLLKI---DNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 359

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L+K PDL+   NLE L L  C+SL+
Sbjct: 360 ELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLILEGCTSLS 419

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT---SCHL 182
           + H S+ +  KL+ ++L  CKS+  LP ++  + LK   L GCS L+  P +    +C +
Sbjct: 420 KVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMESLKVFTLDGCSKLEKFPDIVGNMNCLM 479

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L G G+EEL SSI  L ++  L + +CK LE+I SSI  L+ L+ + +  C  L+
Sbjct: 480 E--LRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK 537

Query: 243 FLEMPSC----NIDGTRSKEQPSSELKLKK--------CPR------PESLPSGQCMFKS 284
            LE        +  GT  ++ P+    LK         C R       + LPS       
Sbjct: 538 NLEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQRLPS----LSG 593

Query: 285 LTSLEIID-CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
           L SLE++D C    R   LP+++G L +L  L +       LP  + QL+ L  L L++C
Sbjct: 594 LCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDC 653

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
             LE +     K   V+++ ++ C++LK  P+
Sbjct: 654 RMLESLPEVPSK---VQTVNLNGCTSLKEIPD 682



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 243/553 (43%), Gaps = 95/553 (17%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS--ELEYISS 348
           ID       P++L N   L  L       + LP GL Q+  L +L + N S  +L Y   
Sbjct: 323 IDNVQLSEGPEDLSN--KLRFLEWHSYPSKSLPAGL-QVDELVELHMANSSIEQLWYGCK 379

Query: 349 SIFKLKSVE---SIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSV--------LKLNKC 396
           S   LK +    S+ +S   +L G P +    ++G + + ++  S+        + L  C
Sbjct: 380 SAVNLKIINLSNSLNLSKTPDLTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNC 439

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
             +  LP++L M +SL    +  C KLE+ PD +GN+  L ELR++GTG+ E+  S+  L
Sbjct: 440 KSIRILPNNLEM-ESLKVFTLDGCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHL 498

Query: 457 -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL------------------- 496
            +L  L +  C + ES+PS +   KSL  L++  C     L                   
Sbjct: 499 ISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNLEKVESSEEFDASGTSIRQP 558

Query: 497 PDEIGNLEYLKVLTIKGTAIREVP------ESLGQLSSLEWLVLSDNNLQ--IIPESLNQ 548
           P  I  L+ LKVL+  G     V        SL  L SLE L L   NL+   +PE +  
Sbjct: 559 PAPIFLLKNLKVLSFDGCKRIAVSLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGC 618

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLR 607
           LSSL SL LS NN   +P  ++ LS L+ L L +   L+ +PE      T   +  TSL+
Sbjct: 619 LSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLK 678

Query: 608 LSVDLRNCLKLDPNELSEII-KDGWMKQSVNGETYITKSM-----------------YFP 649
              ++ + +KL  +++SE +  + W     NG+  +  +M                   P
Sbjct: 679 ---EIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERYLQGLSNPRPGFGIAVP 735

Query: 650 GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNL 709
           GNEIP WF HQS GS+IS++ P  +     MGF  CV             S   +R    
Sbjct: 736 GNEIPGWFNHQSKGSSISVQVPSWS-----MGFVACVAF-----------SAYGERPF-- 777

Query: 710 FDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIF-------AGENSCKRSDEFFFH 762
             + CD ++ G ++Y S        V SDH++L    F         +N    + E  FH
Sbjct: 778 --LRCDFKANGRENYPSLMCINSIQVLSDHIWLFYLSFDYLKELKEWQNESFSNIELSFH 835

Query: 763 IDRSCCEVKKCGI 775
                 +VK CG+
Sbjct: 836 SYERRVKVKNCGV 848



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 49/345 (14%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFL 244
           G+ ++EL       S+I E L Y CK     ++ N+S+S   L   ++  +   PNL+ L
Sbjct: 355 GLQVDELVELHMANSSI-EQLWYGCKSAVNLKIINLSNS---LNLSKTPDLTGIPNLESL 410

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            +  C    + SK  PS         + L  C     LP+   M +SL    +  C   E
Sbjct: 411 ILEGCT---SLSKVHPSLAHHKKLQYMNLVNCKSIRILPNNLEM-ESLKVFTLDGCSKLE 466

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           + PD +GN+  L  L +DGT + EL   +  L  L  L + NC  LE I SSI  LKS++
Sbjct: 467 KFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLK 526

Query: 358 SIEISNCSNLKGFPEIPFC---NIDGSGIERIPS--------SVLKLNKCSKL------E 400
            +++S CS LK   ++      +  G+ I + P+         VL  + C ++      +
Sbjct: 527 KLDLSGCSELKNLEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQ 586

Query: 401 SLPSSLCMFKSLTSLEIID---CKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            LPS       L SLE++D   C   E  LP+++G L +L+ L +       +P+S+ QL
Sbjct: 587 RLPS----LSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQL 642

Query: 457 -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             L  L L+ C   ESLP    V   + ++ +  C +   +PD I
Sbjct: 643 SGLEMLVLEDCRMLESLPE---VPSKVQTVNLNGCTSLKEIPDPI 684


>gi|168052882|ref|XP_001778868.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669737|gb|EDQ56318.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 532

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 262/545 (48%), Gaps = 72/545 (13%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L+ L++  CSSL    + ++ L+ L+ + L  C +LT LP  + +   L+ L L GCS+L
Sbjct: 6   LKTLNMSGCSSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSGCSSL 65

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG---ELLIYSCKRLENISSSIFKLQ 228
            +LP   + +L S   L   G   L   +  L+NI    +L + +C  L  + + + KL 
Sbjct: 66  TSLPNELA-NLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKLTKLF 124

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            LE I +H C +L  L     ++           EL L  C    SLP+      SL  L
Sbjct: 125 SLEGIFLHHCSSLTSLPNELAHLSSLI-------ELDLGGCLSLTSLPNELANLSSLKKL 177

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNC------- 340
            +  C +   LP+EL N+ +L+ L ++G  ++  LP  L  L+ L KL L NC       
Sbjct: 178 NLSGCSSLISLPNELANISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNCFSLTRLP 237

Query: 341 SELEYISSSI-----------------FKLKSVESIEISNCSNLKGFPEIPFCNIDG--- 380
           ++L Y+SS I                   L S++ + +S CSNL   P   F N+     
Sbjct: 238 NKLAYLSSLIELDLGGCSSLTSLPNELANLSSLKRLNLSGCSNLTRSPN-EFANLSSLKK 296

Query: 381 ------SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
                 S +  +P+ +        L L+ CS L SLP+ L    SL  L++ DC  L  L
Sbjct: 297 LHLSGCSSLTSLPNELANISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCSSLTSL 356

Query: 427 PDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLK--LKKCSSFESLPSRLYVSKSL 482
            ++L NL +L+EL + G + +  +PK LA   +L++LK  L  CS+  SLP+ L    SL
Sbjct: 357 QNKLENLSSLKELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSNLISLPNELENLSSL 416

Query: 483 TSLEIIDCKNFMRLPDEIGNL-EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
             L +  C +   LP+E+ NL  + ++     +++  +P  L  LSSLE L LS  ++L 
Sbjct: 417 EDLNLSGCSSLTSLPNELANLSSFERLYLSSCSSLTSLPNELANLSSLERLYLSGCSSLT 476

Query: 541 IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
            +P  L  LSSL  L  +  ++L  +P +L  LSSLK    + NN   +        TS+
Sbjct: 477 SLPNGLENLSSLKVLYFNGYSSLTSLPNKLANLSSLK--KFYLNNCSSL--------TSL 526

Query: 600 PSEFT 604
           P++FT
Sbjct: 527 PNKFT 531



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 163/526 (30%), Positives = 251/526 (47%), Gaps = 60/526 (11%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L +L M G S +    ++++NL SLK I LK    LT+LP+ L+    LE LDL  
Sbjct: 2   NLNSLKTLNMSGCSSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSG 61

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK--- 176
           CSSLT   + +  L+ L  LDL  C SL  L   + +   LK+L L  CSNL  LP    
Sbjct: 62  CSSLTSLPNELANLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKLT 121

Query: 177 ---------------MTS-----CHLRSTLPL-LG--VGIEELPSSIKCLSNIGELLIYS 213
                          +TS      HL S + L LG  + +  LP+ +  LS++ +L +  
Sbjct: 122 KLFSLEGIFLHHCSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLSG 181

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE 273
           C  L ++ + +  +  L+ + ++ C +L  L     N+   +       +L L  C    
Sbjct: 182 CSSLISLPNELANISSLDELYLNGCLSLISLPNELANLSSLK-------KLYLNNCFSLT 234

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALL 332
            LP+      SL  L++  C +   LP+EL NL +L RL + G + +   P     L+ L
Sbjct: 235 RLPNKLAYLSSLIELDLGGCSSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSL 294

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI---------DGSGI 383
            KL L  CS L  + + +  + S++ + +S CS+L   P     NI         D S +
Sbjct: 295 KKLHLSGCSSLTSLPNELANISSLDELYLSGCSSLTSLPN-ELANISSLLRLDLNDCSSL 353

Query: 384 ERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLE--IIDCKKLERLPDELGNL 433
             + + +        L L+ CS L +LP  L  F SLT L+  +  C  L  LP+EL NL
Sbjct: 354 TSLQNKLENLSSLKELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSNLISLPNELENL 413

Query: 434 EALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            +LE+L + G + +  +P  LA L+   +L L  CSS  SLP+ L    SL  L +  C 
Sbjct: 414 SSLEDLNLSGCSSLTSLPNELANLSSFERLYLSSCSSLTSLPNELANLSSLERLYLSGCS 473

Query: 492 NFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD 536
           +   LP+ + NL  LKVL   G +++  +P  L  LSSL+   L++
Sbjct: 474 SLTSLPNGLENLSSLKVLYFNGYSSLTSLPNKLANLSSLKKFYLNN 519



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 231/468 (49%), Gaps = 33/468 (7%)

Query: 61  ILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDL 118
           + +  +L  L + G S +  L +++ N+ SLK++ L     LT+LP+ L+   +LE + L
Sbjct: 72  LANLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKLTKLFSLEGIFL 131

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-K 176
            +CSSLT   + + +L+ L  LDL  C SLTSLP  + +   LK+L L GCS+L +LP +
Sbjct: 132 HHCSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLSGCSSLISLPNE 191

Query: 177 MTSCHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
           + +      L L G + +  LP+ +  LS++ +L + +C  L  + + +  L  L  + +
Sbjct: 192 LANISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNCFSLTRLPNKLAYLSSLIELDL 251

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
             C +L  L     N+   +        L L  C      P+      SL  L +  C +
Sbjct: 252 GGCSSLTSLPNELANLSSLK-------RLNLSGCSNLTRSPNEFANLSSLKKLHLSGCSS 304

Query: 296 FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
              LP+EL N+ +L+ L + G +++  LP  L  ++ L +L+L +CS L  + + +  L 
Sbjct: 305 LTSLPNELANISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCSSLTSLQNKLENLS 364

Query: 355 SVESIEISNCSNLKGFPE--IPFC-------NIDG-SGIERIPSSV--------LKLNKC 396
           S++ + +S CSNL   P+    F        N+ G S +  +P+ +        L L+ C
Sbjct: 365 SLKELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSNLISLPNELENLSSLEDLNLSGC 424

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S L SLP+ L    S   L +  C  L  LP+EL NL +LE L + G + +  +P  L  
Sbjct: 425 SSLTSLPNELANLSSFERLYLSSCSSLTSLPNELANLSSLERLYLSGCSSLTSLPNGLEN 484

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
           L +L  L     SS  SLP++L    SL    + +C +   LP++  N
Sbjct: 485 LSSLKVLYFNGYSSLTSLPNKLANLSSLKKFYLNNCSSLTSLPNKFTN 532



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 34/364 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           L +  C    S P+      SL ++ + +C N  RLP++L NL  L  L + G +++  L
Sbjct: 9   LNMSGCSSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSGCSSLTSL 68

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCNIDG 380
           P  L  L+ L++L+L  CS L  + + +  + S++ + ++NCSNL   P       +++G
Sbjct: 69  PNELANLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKLTKLFSLEG 128

Query: 381 SGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
                     + L+ CS L SLP+ L    SL  L++  C  L  LP+EL NL +L++L 
Sbjct: 129 ----------IFLHHCSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLN 178

Query: 441 VEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           + G + +  +P  LA + +L +L L  C S  SLP+ L    SL  L + +C +  RLP+
Sbjct: 179 LSGCSSLISLPNELANISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNCFSLTRLPN 238

Query: 499 EIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK 556
           ++  L  L  L + G +++  +P  L  LSSL+ L LS  +NL   P     LSSL  L 
Sbjct: 239 KLAYLSSLIELDLGGCSSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSLKKLH 298

Query: 557 LSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR--SFPTSIPSEFTSLR--LSVD 611
           LS  ++L  +P  L  +SSL  L            YL   S  TS+P+E  ++   L +D
Sbjct: 299 LSGCSSLTSLPNELANISSLDEL------------YLSGCSSLTSLPNELANISSLLRLD 346

Query: 612 LRNC 615
           L +C
Sbjct: 347 LNDC 350



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 17/177 (9%)

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TA 515
           +L  L +  CSS  S P+ L    SL ++ + +C N  RLP+++ NL  L+ L + G ++
Sbjct: 5   SLKTLNMSGCSSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSGCSS 64

Query: 516 IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS 573
           +  +P  L  LSSL  L LS  ++L I+   L  +SSL  L L+N +NL R+P +L  L 
Sbjct: 65  LTSLPNELANLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKLTKLF 124

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR--LSVDLRNCLKLD--PNELSEI 626
           SL+ + L             S  TS+P+E   L   + +DL  CL L   PNEL+ +
Sbjct: 125 SLEGIFLHH----------CSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANL 171


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 195/430 (45%), Gaps = 92/430 (21%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+      F +MT LR LKF   +N  +    E +P  ELR+ +WH +P K+L N    +
Sbjct: 382 EVNFGGKAFMQMTSLRFLKF---RNAYVCQGPEFLP-DELRWLDWHGYPSKSLPNSFKGD 437

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LVSL +  S++ QLW   ++L  LK ++L +S+ L + PD S+  NLE L L  C SL 
Sbjct: 438 QLVSLTLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVMPNLERLVLEECKSLV 497

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM-TSCHLRS 184
           E + SI  L KL +L+L  C++L +LP  I  + L+ LVL GCS L+  P++    +  +
Sbjct: 498 EINFSIGDLGKLVLLNLKNCRNLKTLPKRIRLEKLEILVLSGCSKLRTFPEIEEKMNCLA 557

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    + EL +S++ LS +G + +  CK LE++ SSIF+L+ L+++ +  C      
Sbjct: 558 ELYLGATALSELSASVENLSGVGVINLCYCKHLESLPSSIFRLKCLKTLDVSGCS----- 612

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                               KLK  P                              D+LG
Sbjct: 613 --------------------KLKNLP------------------------------DDLG 622

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS--------------SSI 350
            L  L       TAI+ +P  +  L  L  L L+ C+ L                   ++
Sbjct: 623 LLVGLEEFHCTHTAIQTIPSSISLLKNLKHLSLRGCNALSSQVSSSSHGQKSVGVNFQNL 682

Query: 351 FKLKSVESIEISNC--------SNLKGFPEIPFCNIDGSGIERIPSS---------VLKL 393
             L S+  +++S+C        SNL   P +    +DG+    IP++         +L L
Sbjct: 683 SGLCSLIMLDLSDCNISDGGILSNLGFLPSLAGLILDGNNFSNIPAASISRLTRLEILAL 742

Query: 394 NKCSKLESLP 403
             C +LESLP
Sbjct: 743 AGCRRLESLP 752



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 233/501 (46%), Gaps = 73/501 (14%)

Query: 227 LQFLESIRIHRCPNLQFL--EMPSCNIDGTRSKEQPSS-------ELKLKKCPRPESLPS 277
           L+FL+    + C   +FL  E+   +  G  SK  P+S        L LKK    +   +
Sbjct: 396 LRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLTLKKSRIIQLWKT 455

Query: 278 ----GQCMFKSLT-SLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
               G+  + +L+ S ++I  P+F  +P+       L RL+++   ++ E+   +G L  
Sbjct: 456 SKDLGKLKYMNLSHSQKLIRTPDFSVMPN-------LERLVLEECKSLVEINFSIGDLGK 508

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIE 384
           L  L LKNC  L+ +   I +L+ +E + +S CS L+ FPEI           +  + + 
Sbjct: 509 LVLLNLKNCRNLKTLPKRI-RLEKLEILVLSGCSKLRTFPEIEEKMNCLAELYLGATALS 567

Query: 385 RIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
            + +SV        + L  C  LESLPSS+   K L +L++  C KL+ LPD+LG L  L
Sbjct: 568 ELSASVENLSGVGVINLCYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGL 627

Query: 437 EELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           EE     T I+ +P S++ L  L  L L+ C++  S  S     +    +      NF  
Sbjct: 628 EEFHCTHTAIQTIPSSISLLKNLKHLSLRGCNALSSQVSSSSHGQKSVGV------NFQN 681

Query: 496 LPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIP-ESLNQLSSL 552
           L      L  L +L +    I +  +  +LG L SL  L+L  NN   IP  S+++L+ L
Sbjct: 682 LS----GLCSLIMLDLSDCNISDGGILSNLGFLPSLAGLILDGNNFSNIPAASISRLTRL 737

Query: 553 VSLKLSN-NNLERIPERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSLRLS 609
             L L+    LE +PE L P     Y D   +  ++D++ +Y             S+   
Sbjct: 738 EILALAGCRRLESLPE-LPPSIKEIYADECTSLMSIDQLTKY-------------SMLHE 783

Query: 610 VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGS-TI 666
           V    C +L  N+    + D  +KQ   G  Y+    SMY PG EIP+WF ++++G+ +I
Sbjct: 784 VSFTKCHQLVTNKQHASMVDSLLKQMHKG-LYLNGSFSMYIPGVEIPEWFTYKNSGTESI 842

Query: 667 SLKTPQPTGYNKLMGFAFCVV 687
           S+  P+        G A CVV
Sbjct: 843 SVALPKNWYTPTFRGIAICVV 863


>gi|297794605|ref|XP_002865187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311022|gb|EFH41446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1162

 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 41/489 (8%)

Query: 7    EIQINPYTFSKMTELRLLKF----CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL- 59
            E+ I+   F  M  L  LK        K +   H  +G  +   +LR+     +P++ + 
Sbjct: 546  ELHIHENAFKGMHNLLFLKVYTKKWDKKTEVRWHLPKGFNYLPHKLRFLRLDGYPMRCMP 605

Query: 60   NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
            +    ENLV L+M GSK+ +LW+ V +   L+ IDL+ S+ L ++PDLS+A +L+ L+L 
Sbjct: 606  SKFRPENLVKLEMSGSKLERLWEGVHSFRGLRDIDLQKSENLKEIPDLSMATSLKTLNLC 665

Query: 120  YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
             CS+L E   SIQYLNKLE L++  C +L +LP  I+ K L RL L GCS LK  P +++
Sbjct: 666  DCSNLVELPLSIQYLNKLEKLEMSGCINLENLPIGINLKSLGRLNLGGCSRLKIFPDIST 725

Query: 180  CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK-RLENISSSIFK-LQFLESIRIHR 237
                S L L   GIE  PS++     +  L ++ C+ + E +   + + L  L +I  H 
Sbjct: 726  N--ISWLILDETGIETFPSNLP----LENLFLHLCEMKSEKLWGRVQQPLTPLMTILPHS 779

Query: 238  CPNLQFLEMPS-CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
               L   ++PS   +  +       + L ++ C   E+LPSG   F  L  L++  C   
Sbjct: 780  LARLFLSDIPSLVELPASIQNFTKLNRLAIENCINLETLPSG-INFPLLLDLDLRGCSRL 838

Query: 297  ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
               PD   N+  LN   +  T I E+P  + + + L +L +  C++L+ +S  I KLK +
Sbjct: 839  RTFPDISTNIYMLN---VPRTGIEEVPWWIEKFSNLVRLCMGGCNKLQCVSLHISKLKHL 895

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL------CMFK 410
              ++ S+C  L          ID S +E + S  ++ +K   L  +PSS       C   
Sbjct: 896  GDVDFSDCGAL-----TKASWIDSSSVEPMASDNIQ-SKLPFLGEVPSSFPDNLINCFNF 949

Query: 411  SLTSLEIIDCK---KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK--LKLKK 465
            +   + IID +   K  RL  E    E L       TG+      L Q + ++   + K 
Sbjct: 950  NFEQIPIIDPQVDSKYIRLSGE----EVLSYFTHRTTGMSLTNIPLLQTSFTQPFFRFKA 1005

Query: 466  CSSFESLPS 474
            C   +S+ S
Sbjct: 1006 CVVVDSISS 1014



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 196/483 (40%), Gaps = 99/483 (20%)

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            L+FL +    +    SK +P + +KL+    + E L  G   F+ L  +++    N + +
Sbjct: 591  LRFLRLDGYPMRCMPSKFRPENLVKLEMSGSKLERLWEGVHSFRGLRDIDLQKSENLKEI 650

Query: 300  PD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            PD     +L+ LN  + D + + ELP  +  L  L KLE+  C  LE +   I  LKS+ 
Sbjct: 651  PDLSMATSLKTLN--LCDCSNLVELPLSIQYLNKLEKLEMSGCINLENLPIGI-NLKSLG 707

Query: 358  SIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
             + +  CS LK FP+I     +  +D +GIE  PS++        LE+L   LC  KS  
Sbjct: 708  RLNLGGCSRLKIFPDISTNISWLILDETGIETFPSNL-------PLENLFLHLCEMKSE- 759

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
                   K   R+   L  L  +            +P SLA+L LS +      S   LP
Sbjct: 760  -------KLWGRVQQPLTPLMTI------------LPHSLARLFLSDI-----PSLVELP 795

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-------------------- 513
            + +     L  L I +C N   LP  I N   L  L ++G                    
Sbjct: 796  ASIQNFTKLNRLAIENCINLETLPSGI-NFPLLLDLDLRGCSRLRTFPDISTNIYMLNVP 854

Query: 514  -TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD- 570
             T I EVP  + + S+L  L +   N LQ +   +++L  L  +  S+         +D 
Sbjct: 855  RTGIEEVPWWIEKFSNLVRLCMGGCNKLQCVSLHISKLKHLGDVDFSDCGALTKASWIDS 914

Query: 571  ----PLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
                P++S       +N   ++P +L   P+S P          +L NC   +  ++  I
Sbjct: 915  SSVEPMAS-------DNIQSKLP-FLGEVPSSFPD---------NLINCFNFNFEQIPII 957

Query: 627  IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTIS-LKTPQPTGYNKLMGFAFC 685
                            +K +   G E+  +F H++TG +++ +   Q +       F  C
Sbjct: 958  -----------DPQVDSKYIRLSGEEVLSYFTHRTTGMSLTNIPLLQTSFTQPFFRFKAC 1006

Query: 686  VVV 688
            VVV
Sbjct: 1007 VVV 1009



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 35/261 (13%)

Query: 368 KGFPEIP----FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           KGF  +P    F  +DG  +  +PS     N                 L  LE+    KL
Sbjct: 582 KGFNYLPHKLRFLRLDGYPMRCMPSKFRPEN-----------------LVKLEM-SGSKL 623

Query: 424 ERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSL 482
           ERL + + +   L ++ ++ +  ++E+P      +L  L L  CS+   LP  +     L
Sbjct: 624 ERLWEGVHSFRGLRDIDLQKSENLKEIPDLSMATSLKTLNLCDCSNLVELPLSIQYLNKL 683

Query: 483 TSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII 542
             LE+  C N   LP  I NL+ L  L + G +  ++   +   +++ WL+L +  ++  
Sbjct: 684 EKLEMSGCINLENLPIGI-NLKSLGRLNLGGCSRLKIFPDIS--TNISWLILDETGIETF 740

Query: 543 PESL---NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
           P +L   N    L  +K S     R+ + L PL ++    L    L  IP  L   P SI
Sbjct: 741 PSNLPLENLFLHLCEMK-SEKLWGRVQQPLTPLMTILPHSLARLFLSDIPS-LVELPASI 798

Query: 600 PSEFTSL-RLSVDLRNCLKLD 619
            + FT L RL+++  NC+ L+
Sbjct: 799 QN-FTKLNRLAIE--NCINLE 816


>gi|224133150|ref|XP_002321495.1| predicted protein [Populus trichocarpa]
 gi|222868491|gb|EEF05622.1| predicted protein [Populus trichocarpa]
          Length = 767

 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 206/840 (24%), Positives = 329/840 (39%), Gaps = 189/840 (22%)

Query: 18  MTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWEN-LVSLKMPGSK 76
           M  LRLL+   +K   +    +  P   L++ +W   P+K L   +  + L  L +  S 
Sbjct: 1   MVNLRLLQINHAK---LQGKFKNFP-AGLKWLQWKNCPMKNLPSDYAPHELAVLDLSESG 56

Query: 77  VTQLWDDVQNLVS--LKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           + ++W    N V+  L  +DL     L   PDLS  + LE L+L  C  LT+ H S+   
Sbjct: 57  IERVWGWTSNKVAKNLMVMDLHGCYNLVACPDLSGCKTLEKLNLQGCVRLTKVHKSVGNA 116

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
             L  L+L+ C +L   P+ +   K L+ L L  C NLK+LP+                 
Sbjct: 117 RTLLQLNLNDCSNLVEFPSDVSGLKVLQNLNLSNCPNLKDLPQ----------------- 159

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
                 I  + ++ +LL+     +  +  SIF+L  LE + ++ C  ++ L     N+  
Sbjct: 160 -----EIGSMYSLKQLLVDKTA-ISVLPESIFRLTKLEKLSLNGCQFIKRLPKHLGNLSS 213

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
            +       EL L +    E LP       +L  L ++ C +   +P+ +GNLQ L  + 
Sbjct: 214 LK-------ELSLNQSAV-EELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVS 265

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           I+ +AI+ELP  +G L  L  L    C  L  +  SI  L S+  +E+   S +   PE 
Sbjct: 266 INSSAIKELPPAIGSLPYLKILSAGGCRSLSKLPDSIGGLASISELELDETS-ISHLPE- 323

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
                   G++ I    L + KC+ L SLP S+    SLT+L +  C  +  LP+  G L
Sbjct: 324 -----QIGGLKMIEK--LYMRKCTSLSSLPESIGSMLSLTTLNLFGC-NINELPESFGML 375

Query: 434 EALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
           E L  LR                      L +C   +                       
Sbjct: 376 ENLVMLR----------------------LHQCRKLQ----------------------- 390

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL---------SDNNLQIIPE 544
            +LP  IG L+ L  L ++ TA+  +PES G+LS+L  L +         +   L ++P 
Sbjct: 391 -KLPVSIGKLKSLCHLLMEKTAVTVLPESFGKLSNLMILKMGKEPLESPSTQEQLVVLPS 449

Query: 545 SLNQLSSLVSLKLSNNNLE-RIPERLDPLSSLKYLDLFENNLDRIP-------------- 589
           S  +LS L  L      +  +IP+  + LSSL+ +DL  NN   +P              
Sbjct: 450 SFFELSLLKELNARAWRISGKIPDDFEKLSSLEMVDLGHNNFSSLPSSLCGLSLLRKLHL 509

Query: 590 ---EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK--QSVNGETYI-- 642
              E L S P  +PS      + VD+ NC  L+   +S++   G +      N E  +  
Sbjct: 510 PHCEELESLPP-LPSSL----VEVDVSNCFALE--TMSDVSNLGSLTLLNMTNCEKVVDI 562

Query: 643 -----------------------------------TKSMYFPGNEIPKWFRHQSTGSTIS 667
                                               +++  PG++IP WF  +    +  
Sbjct: 563 PGIECLKSLKRLYMSNCKACSLKVKRRLSKVCLRNIRNLSMPGSKIPDWFSQEDVKFS-- 620

Query: 668 LKTPQPTGYNKLMGFAFCVVVAC--SVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYT 725
                     ++      VVV+    + E  R+  V  D + NL D     +++   S T
Sbjct: 621 -----ERRNREIKAVIIGVVVSLDRQIPEQLRYLPVVPDIQVNLLD-----QNKPIFS-T 669

Query: 726 SSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDR------SCCEVKKCGIHFVH 779
           + YL  I     DH+ L              D     + +         E+KKCGIH V+
Sbjct: 670 TLYLQGIPKTHEDHIHLCRYSHFNPLVLMLKDGSEIQVRKRKPPVIEGVELKKCGIHLVY 729


>gi|7488167|pir||B71437 probable resistance gene - Arabidopsis thaliana
          Length = 1422

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 200/785 (25%), Positives = 335/785 (42%), Gaps = 185/785 (23%)

Query: 10   INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLV 68
            I+   F  M  L+ L+     +  +  SL  +P  +LR  EW   PLK+L +    E LV
Sbjct: 549  IDEKLFKGMRNLQYLEIGYWSDGDLPQSLVYLPL-KLRLLEWVYCPLKSLPSTFRAEYLV 607

Query: 69   SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
             L M  SK+ +LW+    L SLK+++L YSK   ++PDLSLA NLE L+L  C SL    
Sbjct: 608  KLIMKNSKLEKLWEGTLPLGSLKKMNLWYSKYFKEIPDLSLAINLEELNLSECESLVTLP 667

Query: 129  SSIQYLNKLEVL---------------------------DLDRCKSLTSLPTS------- 154
            SSIQ   KL  L                            ++  + +   P+        
Sbjct: 668  SSIQNAIKLRTLYCSGVLLIDLKSLEGMCNLEYLSVDCSRMEGTQGIVYFPSKLRLLLWN 727

Query: 155  ------IHS----KYLKRLVLRGC------SNLKNLPKMTSCHLRST-----LPLLGVGI 193
                  +HS    +YL +L +            + L ++    LR +     +P L + I
Sbjct: 728  NCPLKRLHSNFKVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAI 787

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ---FLEMPSCN 250
                ++IK +     L I  CK+LE+  + +  L+ LE + +  CPNL+    ++M   +
Sbjct: 788  NLEENAIKLIY----LDISDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSD 842

Query: 251  IDGTRSKEQPSSELKLKKCPRPESLPSG--------QCM--------------------- 281
            +D    +    +E+ ++ C   ++LP+G        +CM                     
Sbjct: 843  VDFPEGR----NEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCYKHEK 898

Query: 282  ----FKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
                 +SL SLE +D     N   +PD L     L  L ++   ++  LP  +G L  L 
Sbjct: 899  LWEGIQSLGSLEEMDLSESENLTEIPD-LSKATNLKHLYLNNCKSLVTLPSTIGNLQKLV 957

Query: 334  KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPSS 389
            +LE+K C+ LE + + +  L S+E++++S CS+L+ FP     I +  ++ + IE I   
Sbjct: 958  RLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEI--- 1013

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
             L L+K +KLESL              + +CK L  LP  +GNL+ L             
Sbjct: 1014 -LDLSKATKLESLI-------------LNNCKSLVTLPSTIGNLQNLR------------ 1047

Query: 450  PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
                      +L +K+C+  E LP+ + +S SL  L++  C +    P    N+ +   L
Sbjct: 1048 ----------RLYMKRCTGLEVLPTDVNLS-SLGILDLSGCSSLRTFPLISTNIVW---L 1093

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
             ++ TAI EVP  +   + L  L++     L+ I  ++ +L SL+    ++         
Sbjct: 1094 YLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNISPNIFRLRSLMFADFTDCR-----GV 1148

Query: 569  LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL-----SVDLRNCLKLDPNEL 623
            +  LS    +   E+++  +       P S   E+T  R      S    NC KL+ +  
Sbjct: 1149 IKALSDATVVATMEDHVSCV-------PLSENIEYTCERFWDALESFSFCNCFKLERDAR 1201

Query: 624  SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFA 683
              I++  +            K +  PG EIPK+F +++ G ++++  PQ +       F 
Sbjct: 1202 ELILRSCF------------KHVALPGGEIPKYFTYRAYGDSLTVTLPQSSLSQYFFPFK 1249

Query: 684  FCVVV 688
             CVVV
Sbjct: 1250 ACVVV 1254


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1336

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 201/392 (51%), Gaps = 39/392 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 476 EAQWNMEAFSKMSRLRLLKI---DNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 531

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L+K PDL+   NLE L L  C+SL+
Sbjct: 532 ELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLILEGCTSLS 591

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT---SCHL 182
           + H S+ +  KL+ ++L  CKS+  LP ++  + LK   L GCS L+  P +    +C +
Sbjct: 592 KVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMESLKVFTLDGCSKLEKFPDIVGNMNCLM 651

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L G G+EEL SSI  L ++  L + +CK LE+I SSI  L+ L+ + +  C  L+
Sbjct: 652 E--LRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK 709

Query: 243 FLEMPSC----NIDGTRSKEQPSSELKLKK--------CPR------PESLPSGQCMFKS 284
            LE        +  GT  ++ P+    LK         C R       + LPS       
Sbjct: 710 NLEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQRLPS----LSG 765

Query: 285 LTSLEIID-CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
           L SLE++D C    R   LP+++G L +L  L +       LP  + QL+ L  L L++C
Sbjct: 766 LCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDC 825

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
             LE +     K   V+++ ++ C++LK  P+
Sbjct: 826 RMLESLPEVPSK---VQTVNLNGCTSLKEIPD 854



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 247/554 (44%), Gaps = 97/554 (17%)

Query: 291  IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS--ELEYISS 348
            ID       P++L N   L  L       + LP GL Q+  L +L + N S  +L Y   
Sbjct: 495  IDNVQLSEGPEDLSN--KLRFLEWHSYPSKSLPAGL-QVDELVELHMANSSIEQLWYGCK 551

Query: 349  SIFKLKSVE---SIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSV--------LKLNKC 396
            S   LK +    S+ +S   +L G P +    ++G + + ++  S+        + L  C
Sbjct: 552  SAVNLKIINLSNSLNLSKTPDLTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNC 611

Query: 397  SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
              +  LP++L M +SL    +  C KLE+ PD +GN+  L ELR++GTG+ E+  S+  L
Sbjct: 612  KSIRILPNNLEM-ESLKVFTLDGCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHL 670

Query: 457  -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL------------------- 496
             +L  L +  C + ES+PS +   KSL  L++  C     L                   
Sbjct: 671  ISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNLEKVESSEEFDASGTSIRQP 730

Query: 497  PDEIGNLEYLKVLTIKG---TAI----REVPESLGQLSSLEWLVLSDNNLQ--IIPESLN 547
            P  I  L+ LKVL+  G    A+    + +P SL  L SLE L L   NL+   +PE + 
Sbjct: 731  PAPIFLLKNLKVLSFDGCKRIAVSLTDQRLP-SLSGLCSLEVLDLCACNLREGALPEDIG 789

Query: 548  QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL 606
             LSSL SL LS NN   +P  ++ LS L+ L L +   L+ +PE      T   +  TSL
Sbjct: 790  CLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSL 849

Query: 607  RLSVDLRNCLKLDPNELSEII-KDGWMKQSVNGETYITKSM-----------------YF 648
            +   ++ + +KL  +++SE +  + W     NG+  +  +M                   
Sbjct: 850  K---EIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERYLQGLSNPRPGFGIAV 906

Query: 649  PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCN 708
            PGNEIP WF HQS GS+IS++ P  +     MGF  CV             S   +R   
Sbjct: 907  PGNEIPGWFNHQSKGSSISVQVPSWS-----MGFVACVAF-----------SAYGERPF- 949

Query: 709  LFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIF-------AGENSCKRSDEFFF 761
               + CD ++ G ++Y S        V SDH++L    F         +N    + E  F
Sbjct: 950  ---LRCDFKANGRENYPSLMCINSIQVLSDHIWLFYLSFDYLKELKEWQNESFSNIELSF 1006

Query: 762  HIDRSCCEVKKCGI 775
            H      +VK CG+
Sbjct: 1007 HSYERRVKVKNCGV 1020



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 49/345 (14%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFL 244
           G+ ++EL       S+I E L Y CK     ++ N+S+S   L   ++  +   PNL+ L
Sbjct: 527 GLQVDELVELHMANSSI-EQLWYGCKSAVNLKIINLSNS---LNLSKTPDLTGIPNLESL 582

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            +  C    + SK  PS         + L  C     LP+   M +SL    +  C   E
Sbjct: 583 ILEGCT---SLSKVHPSLAHHKKLQYMNLVNCKSIRILPNNLEM-ESLKVFTLDGCSKLE 638

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           + PD +GN+  L  L +DGT + EL   +  L  L  L + NC  LE I SSI  LKS++
Sbjct: 639 KFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLK 698

Query: 358 SIEISNCSNLKGFPEIPFC---NIDGSGIERIPS--------SVLKLNKCSKL------E 400
            +++S CS LK   ++      +  G+ I + P+         VL  + C ++      +
Sbjct: 699 KLDLSGCSELKNLEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQ 758

Query: 401 SLPSSLCMFKSLTSLEIID---CKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            LPS       L SLE++D   C   E  LP+++G L +L+ L +       +P+S+ QL
Sbjct: 759 RLPS----LSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQL 814

Query: 457 -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             L  L L+ C   ESLP    V   + ++ +  C +   +PD I
Sbjct: 815 SGLEMLVLEDCRMLESLPE---VPSKVQTVNLNGCTSLKEIPDPI 856


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 203/394 (51%), Gaps = 33/394 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           ++ +++  Q N   FSKM++LRLLK     N  +    E +   +LR+ EWH +P K+L 
Sbjct: 302 LALMDNTAQWNMKAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLP 357

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
             L  + LV L M  S + QLW   ++ V+LK I+L  S  L K PD +   NLE L L 
Sbjct: 358 AGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPDFTGIPNLENLILE 417

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT- 178
            C+SL+E H S+    KL+ ++L  C+S+  LP+++  + LK   L GCS L+  P +  
Sbjct: 418 GCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEMESLKVFTLDGCSKLERFPDIVG 477

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
           + +    L L G GI EL SSI+ L  +G L + +CK LE+I SSI  L+ L+ + +  C
Sbjct: 478 NMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLKKLDLSCC 537

Query: 239 PNLQFL--------EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPSGQCMF 282
             L+ +         +   ++ GT  ++ P+S   LK         C R   LPS     
Sbjct: 538 SALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLKVLSLDGCKRIVVLPS----L 593

Query: 283 KSLTSLEIID---CPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
             L SLE++    C   E  LP+++G L +L  L +       LP+ + QL+ L  L L+
Sbjct: 594 SRLCSLEVLGLRACNLREGELPEDIGYLSSLRSLDLSQNNFVSLPKAINQLSELEMLVLE 653

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           +C+ L  +     K   V+++ ++ C +LK  P+
Sbjct: 654 DCTMLASLPEVPSK---VQTVNLNGCRSLKTIPD 684



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 241/519 (46%), Gaps = 91/519 (17%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
            SL +I  P+F  +P+       L  LI++G T++ E+   L +   L  + L +C  + 
Sbjct: 395 NSLNLIKTPDFTGIPN-------LENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIR 447

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV------- 390
            + S++ +++S++   +  CS L+ FP+I           +DG+GI  + SS+       
Sbjct: 448 ILPSNL-EMESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLG 506

Query: 391 -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            L +  C  LES+PSS+   KSL  L++  C  L+ +P+ LG +E+LEE  V GT IR+ 
Sbjct: 507 LLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQ- 565

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
                                 LP+ +++ K+L  L +  CK  + LP  +  L  L+VL
Sbjct: 566 ----------------------LPASVFLLKNLKVLSLDGCKRIVVLPS-LSRLCSLEVL 602

Query: 510 TIKGTAIR--EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            ++   +R  E+PE +G LSSL  L LS NN   +P+++NQLS L  L L +   L  +P
Sbjct: 603 GLRACNLREGELPEDIGYLSSLRSLDLSQNNFVSLPKAINQLSELEMLVLEDCTMLASLP 662

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           E    + ++        +L  IP+ ++   +S  SEF  L       NC +L  +   E 
Sbjct: 663 EVPSKVQTVNLNGC--RSLKTIPDPIK-LSSSKRSEFLCL-------NCWELYNHNGQES 712

Query: 627 IKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
           +    +++ + G +       +  PGNEIP WF H+S GS+IS++ P        MGF  
Sbjct: 713 MGLTMLERYLQGFSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQVPSGR-----MGFFA 767

Query: 685 CVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY-LGKISHVESDHVFLG 743
           CV                +D   +LF   C  ++ G ++Y S   +    H+ SDH++L 
Sbjct: 768 CVAFNA------------NDESPSLF---CHFKANGRENYPSPMCINFEGHLFSDHIWLF 812

Query: 744 SSIF-------AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
              F         ++    + E  FH      +V  CG+
Sbjct: 813 YLSFDYLKELQEWQHESFSNIELSFHSYEQGVKVNNCGV 851


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1541

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 205/756 (27%), Positives = 332/756 (43%), Gaps = 144/756 (19%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
            +SEI I   +F  MTELRLL+     N  +  +L+ +P +EL++ +W   PL+ L  + L
Sbjct: 748  SSEITIPVESFVPMTELRLLQI---NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDFL 803

Query: 63   HWE-NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              + +++ L   G +  Q     +   +LK + L+    L  +PDLS  + LE+L    C
Sbjct: 804  ARQLSVLDLSESGIRRVQTLRSNRVDENLKVLILRGCHSLEAIPDLSNHEALEMLVFEQC 863

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK---- 176
            + L +   S+  L KL  LD  RC  L+     +   K L++L L GCS+L  LP+    
Sbjct: 864  TLLVKVPKSVGNLRKLLHLDFSRCSKLSEFLADVSGLKRLEKLFLSGCSDLSVLPENIGA 923

Query: 177  MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK--------------------- 215
            MTS      L L G  I+ LP SI  L N+  L +  C+                     
Sbjct: 924  MTSL---KELLLDGTAIKYLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKLYLN 980

Query: 216  --RLENISSSIFKLQFLESIRIHRCPNL--------QFLEMPSCNIDGTRSKEQPSSELK 265
               L+N+ SSI  L+ L+ + + RC +L        + + +    I G+  +E P     
Sbjct: 981  DTALKNLPSSIGDLKKLQDLHLVRCTSLSKIPDSINELISLKKLFITGSAVEELPL---- 1036

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
                 +P SLP       SLT      C   +++P  +G L +L +L ++ T I  LP+ 
Sbjct: 1037 -----KPSSLP-------SLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKE 1084

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            +G L  + KLEL NC  L+++  SI  + ++       CS           N++GS IE 
Sbjct: 1085 IGALHFIRKLELMNCEFLKFLPKSIGDMDTL-------CS----------LNLEGSNIEE 1127

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
            +P    KL                ++L  L + +C  L+RLP+  G+L++L  L ++ T 
Sbjct: 1128 LPEEFGKL----------------ENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETL 1171

Query: 446  IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
            + E+P+S   L+       K    E L + L+      +    +   F+ +P+   NL  
Sbjct: 1172 VSELPESFGNLS-------KLMVLEMLKNPLFRISESNAPGTSEEPRFVEVPNSFSNLTS 1224

Query: 506  LKVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLE 563
            L+ L  +   I  ++P+ L +LSSL  L L +N    +P SL  LS+L  L L +   L+
Sbjct: 1225 LEELDARSWRISGKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLRDCRELK 1284

Query: 564  RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLK-LDPNE 622
            R+P     L  L   + F  +L+ + +          SE T L   ++L NC K +D   
Sbjct: 1285 RLPPLPCKLEHLNMANCF--SLESVSDL---------SELTILE-DLNLTNCGKVVDIPG 1332

Query: 623  LSEI--IKDGWM------------KQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
            L  +  +K  +M            K+       + +++  PGN +P W    S G     
Sbjct: 1333 LEHLMALKRLYMTGCNSNYSLAVKKRLSKASLKMLRNLSLPGNRVPDWL---SQGPVTFS 1389

Query: 669  KTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
              P      +L G    VVVA +      +E+ +DD
Sbjct: 1390 AQPN----KELRGVIIAVVVALN------NETEDDD 1415


>gi|168041140|ref|XP_001773050.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675597|gb|EDQ62090.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 356

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 192/385 (49%), Gaps = 43/385 (11%)

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           +  L++L+L  C+ L  LPTSI S   LK L +  C +L +LP                 
Sbjct: 1   MTSLKILNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPN---------------- 44

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
                  +  L+++  L +  C  L ++ + +  L  L ++ I  C  L    +P  N  
Sbjct: 45  ------ELGNLTSLTSLNMKGCSSLTSLPNELGNLTSLTTLNISWC--LSLTSLP--NEL 94

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
           G  S     + L +++C R  SLP+      SLT L +++C +   LP+ELGNL +L  L
Sbjct: 95  GNHSSL---TTLNMEECSRLTSLPNELGHLTSLTILNMMECSSLTSLPNELGNLTSLTTL 151

Query: 313 IIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            ++  + +  LP  LG L  L+ L ++ CS L  + + +  L S+ ++ +  CS L   P
Sbjct: 152 NLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPNELGNLTSLTTLNMEECSRLTSLP 211

Query: 372 EIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
                    + +  + S + L +  CS L SLP+ L  F SLT+L + +C  L  LP+EL
Sbjct: 212 ---------NELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEECSSLTSLPNEL 262

Query: 431 GNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           GNL +L  L + G + +  +PK L  L +L+ L +++CSS  SLP+ L    SLT+L I 
Sbjct: 263 GNLISLTTLNMGGCSSLTSLPKELGNLTSLTTLNMERCSSLSSLPNELGNLTSLTTLNIS 322

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKG 513
            C +   LP+E+ NL  L  L ++G
Sbjct: 323 WCLSLTSLPNELDNLTSLTTLNMEG 347



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 189/353 (53%), Gaps = 27/353 (7%)

Query: 285 LTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNC 340
           +TSL+I++   C   + LP  +G+L +L  L I+   ++  LP  LG L  L+ L +K C
Sbjct: 1   MTSLKILNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGC 60

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S L  + + +  L S+ ++ IS C +L   P     N  G+       + L + +CS+L 
Sbjct: 61  SSLTSLPNELGNLTSLTTLNISWCLSLTSLP-----NELGNHSSL---TTLNMEECSRLT 112

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-AL 458
           SLP+ L    SLT L +++C  L  LP+ELGNL +L  L +E  + +  +P  L  L +L
Sbjct: 113 SLPNELGHLTSLTILNMMECSSLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSL 172

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIR 517
           + L +++CS   SLP+ L    SLT+L + +C     LP+E+G+L  L  L +KG +++ 
Sbjct: 173 TTLNMERCSRLTSLPNELGNLTSLTTLNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLT 232

Query: 518 EVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
            +P  LG  +SL  L + + ++L  +P  L  L SL +L +   ++L  +P+ L  L+SL
Sbjct: 233 SLPNELGHFTSLTTLNMEECSSLTSLPNELGNLISLTTLNMGGCSSLTSLPKELGNLTSL 292

Query: 576 KYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNELSEI 626
             L     N++R    L S P  +    TSL  ++++  CL L   PNEL  +
Sbjct: 293 TTL-----NMERC-SSLSSLPNEL-GNLTSLT-TLNISWCLSLTSLPNELDNL 337



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 37/356 (10%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L+IL+L YC  L    +SI  L  L+ L+++ C+SLTSLP  + +   L  L ++GCS+L
Sbjct: 4   LKILNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGCSSL 63

Query: 172 KNLPK-------MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
            +LP        +T+ ++   L L       LP+ +   S++  L +  C RL ++ + +
Sbjct: 64  TSLPNELGNLTSLTTLNISWCLSL-----TSLPNELGNHSSLTTLNMEECSRLTSLPNEL 118

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
             L  L  + +  C +L  L     N+    +       L L++C R  SLP+      S
Sbjct: 119 GHLTSLTILNMMECSSLTSLPNELGNLTSLTT-------LNLERCSRLTSLPNELGNLTS 171

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSEL 343
           LT+L +  C     LP+ELGNL +L  L ++  + +  LP  LG L  L+ L +K CS L
Sbjct: 172 LTTLNMERCSRLTSLPNELGNLTSLTTLNMEECSRLTSLPNELGHLTSLTTLNMKGCSSL 231

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNIDGSGIERIPS---------- 388
             + + +    S+ ++ +  CS+L   P      I    ++  G   + S          
Sbjct: 232 TSLPNELGHFTSLTTLNMEECSSLTSLPNELGNLISLTTLNMGGCSSLTSLPKELGNLTS 291

Query: 389 -SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
            + L + +CS L SLP+ L    SLT+L I  C  L  LP+EL NL +L  L +EG
Sbjct: 292 LTTLNMERCSSLSSLPNELGNLTSLTTLNISWCLSLTSLPNELDNLTSLTTLNMEG 347



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 170/344 (49%), Gaps = 28/344 (8%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
            + +L+SLK ++++  + LT LP+ L    +L  L++  CSSLT   + +  L  L  L+
Sbjct: 21  SIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGCSSLTSLPNELGNLTSLTTLN 80

Query: 142 LDRCKSLTSLPTSI--HSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV----GIEE 195
           +  C SLTSLP  +  HS  L  L +  CS L +LP     HL S L +L +     +  
Sbjct: 81  ISWCLSLTSLPNELGNHSS-LTTLNMEECSRLTSLPNELG-HLTS-LTILNMMECSSLTS 137

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP+ +  L+++  L +  C RL ++ + +  L  L ++ + RC  L  L     N+    
Sbjct: 138 LPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPNELGNLTSLT 197

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
           +       L +++C R  SLP+      SLT+L +  C +   LP+ELG+  +L  L ++
Sbjct: 198 T-------LNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNME 250

Query: 316 G-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             +++  LP  LG L  L+ L +  CS L  +   +  L S+ ++ +  CS+L   P   
Sbjct: 251 ECSSLTSLPNELGNLISLTTLNMGGCSSLTSLPKELGNLTSLTTLNMERCSSLSSLP--- 307

Query: 375 FCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
                 + +  + S + L ++ C  L SLP+ L    SLT+L +
Sbjct: 308 ------NELGNLTSLTTLNISWCLSLTSLPNELDNLTSLTTLNM 345


>gi|15238999|ref|NP_196686.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8953387|emb|CAB96660.1| RPP1 disease resistance protein-like [Arabidopsis thaliana]
 gi|332004269|gb|AED91652.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1189

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 156/498 (31%), Positives = 241/498 (48%), Gaps = 55/498 (11%)

Query: 4    INSEIQINPYTFSKMTELRLLKF-CGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
            I  E  +N   F  M+ L+ L+F C      +   L  +   +L+  +W  FP+  L + 
Sbjct: 591  IEEEFDMNERVFEGMSNLQFLRFDCDHDTLQLSRGLSYLS-RKLQLLDWIYFPMTCLPST 649

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            ++ E L+ L +  SK+  LW+ V+ L +L+++DL YS  L +LPDLS A NL  L L  C
Sbjct: 650  VNVEFLIELNLTHSKLDMLWEGVKPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNC 709

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SSL +  S I     LE LDL+ C SL  LP+   +  L++L+LR CSNL          
Sbjct: 710  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLV--------- 760

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                         ELPSSI    N+ EL +Y C  L  + SSI     L  + ++ C NL
Sbjct: 761  -------------ELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL 807

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
              LE+PS   +    +     +L L++C +   LPS      +L +L + DC +   LP 
Sbjct: 808  --LELPSSIGNAINLQ-----KLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPS 860

Query: 302  ELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
             +GN   L  + +   + + ELP  +G L  L +L LK CS+LE +  +I  L+S++ + 
Sbjct: 861  SIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILV 919

Query: 361  ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIID 419
            +++CS LK FPE             I ++V  L  C + +E +P S+  +  L  L +  
Sbjct: 920  LNDCSMLKRFPE-------------ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSY 966

Query: 420  CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYV 478
               L   P     L+ +  L + G  I+EVP  + +++ L  L LK      SLP    +
Sbjct: 967  FDNLVEFPHV---LDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---I 1020

Query: 479  SKSLTSLEIIDCKNFMRL 496
              SL  ++  DC++  RL
Sbjct: 1021 PDSLKWIDAEDCESLERL 1038



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 211/443 (47%), Gaps = 64/443 (14%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L + +C +  +LP  +GN   L  L ++G +++ ELP   G    L KL L+ CS 
Sbjct: 700  NLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPS-FGDAINLQKLLLRYCSN 758

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDG-SGIERIPSSV---- 390
            L  + SSI    ++  +++  CS+L   P        +   +++G S +  +PSS+    
Sbjct: 759  LVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAI 818

Query: 391  ----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TG 445
                L L +C+KL  LPSS+    +L +L + DC  L  LP  +GN   L  + +   + 
Sbjct: 819  NLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSN 878

Query: 446  IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEII---DCKNFMRLPDEIG 501
            + E+P S+  L  L +L LK CS  E LP    ++ +L SL+I+   DC    R P+   
Sbjct: 879  LVELPLSIGNLQKLQELILKGCSKLEDLP----ININLESLDILVLNDCSMLKRFPEIST 934

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN 560
            N+   + L + GTAI EVP S+     L+ L++S  +NL   P  L+ +++L    LS  
Sbjct: 935  NV---RALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHVLDIITNL---DLSGK 988

Query: 561  NLERIPERLDPLSSLKYLDLFEN----NLDRIPEYLRSFPTS-------IPSEFTSLRLS 609
             ++ +P  +  +S L+ L L       +L +IP+ L+            +   F +  ++
Sbjct: 989  EIQEVPPLIKRISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESLERLDCSFHNPEIT 1048

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
            +    C KL+      II+              TK    PG E+P +F H+++G ++++K
Sbjct: 1049 LFFGKCFKLNQEARDLIIQTP------------TKQAVLPGREVPAYFTHRASGGSLTIK 1096

Query: 670  ---TPQPTGYNKLMGFAFCVVVA 689
                P PT     M +  C+++ 
Sbjct: 1097 LNERPLPTS----MRYKACILLV 1115



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 29/218 (13%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
           + L+    L+ LP  L    +L  L + +C  L +LP  +GN   LE+L + G + + E+
Sbjct: 681 MDLSYSVNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVEL 739

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P     + L KL L+ CS+   LPS +  + +L  L++  C + +RLP  IGN   L +L
Sbjct: 740 PSFGDAINLQKLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLIL 799

Query: 510 TIKG-TAIREVPESLGQLSSLEWLVL--------------SDNNLQI-----------IP 543
            + G + + E+P S+G   +L+ L L              +  NLQ            +P
Sbjct: 800 DLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELP 859

Query: 544 ESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
            S+   ++LV + LSN +NL  +P  +  L  L+ L L
Sbjct: 860 SSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELIL 897


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 160/624 (25%), Positives = 258/624 (41%), Gaps = 151/624 (24%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW- 64
             E+ ++      +  LRLL+   +K K    S        L++ +W   PLK L   +  
Sbjct: 581  GELILDTEALKSLVNLRLLQINHAKVKGKFKSFPA----SLKWLQWKNCPLKKLPSDYAP 636

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
              L  L +  S + ++W   +N V                     A+NL +++L  C +L
Sbjct: 637  HELAVLDLSESGIQRVWGWTRNKV---------------------AENLMVMNLRRCYNL 675

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
             E    +    KLE LD   C  LT +  S+ + + L +L L  C NL   P+  S    
Sbjct: 676  -EASPDLSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCINLVEFPRDVS---- 730

Query: 184  STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
                            ++ L N   L++ SC +LE +   I  +  L+ + +        
Sbjct: 731  ---------------GLRLLQN---LILSSCLKLEELPQDIGSMNSLKELVV-------- 764

Query: 244  LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
                    D T     P S  +L K                L  L + DC   +RLP+ L
Sbjct: 765  --------DETAISMLPQSLYRLTK----------------LEKLSLNDCKFIKRLPERL 800

Query: 304  GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
            GNL +L  L ++ +A+ ELP+ +G L+ L KL L  C  L  I  SI  L+S+  + I++
Sbjct: 801  GNLISLKELSLNHSAVEELPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSITS 860

Query: 364  CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
                             S I+ +P+++          SLP    +F          C  L
Sbjct: 861  -----------------SAIKELPAAI---------GSLPYLKTLFAG-------GCHFL 887

Query: 424  ERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL-SKLKLKKCSSFESLPSRLYVSKSL 482
             +LPD +G L ++ EL ++GT I E+P+ +  L +  KL L+KC+S   LP  +    +L
Sbjct: 888  SKLPDSIGGLASISELELDGTSISELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNL 947

Query: 483  TSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQI 541
            T++ +  C N   LP+  G LE L +L +     + ++P S+G L SL  L++    + +
Sbjct: 948  TTINLFGC-NITELPESFGRLENLVMLNLDECKRLHKLPVSIGNLKSLCHLLMEKTAVTV 1006

Query: 542  IPESLNQLSSLVSLKLSNNNLE---------------------------------RIPER 568
            +PE+   LSSL+ LK+  + LE                                 ++P+ 
Sbjct: 1007 LPENFGNLSSLMILKMQKDPLEYLRTQEQLVVLPNSFSKLSLLEELNARAWRISGKLPDD 1066

Query: 569  LDPLSSLKYLDLFENNLDRIPEYL 592
             + LSSL  LDL  NN   +P  L
Sbjct: 1067 FEKLSSLDILDLGHNNFSSLPSSL 1090



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 195/447 (43%), Gaps = 83/447 (18%)

Query: 77   VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLN 135
            + +L + + NL+SLK + L +S  + +LPD +    NLE L L  C SLT    SI+ L 
Sbjct: 793  IKRLPERLGNLISLKELSLNHSA-VEELPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQ 851

Query: 136  KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
             L  + +    ++  LP +I S  YLK L   GC  L  LP  +      S L L G  I
Sbjct: 852  SLMEVSIT-SSAIKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSI 910

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
             ELP  I+ L  I +L +  C  L  +  +I  +            NL  + +  CNI  
Sbjct: 911  SELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNIL-----------NLTTINLFGCNI-- 957

Query: 254  TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
                                 LP      ++L  L + +C    +LP  +GNL++L  L+
Sbjct: 958  -------------------TELPESFGRLENLVMLNLDECKRLHKLPVSIGNLKSLCHLL 998

Query: 314  IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI--SNCSNLKGFP 371
            ++ TA+  LPE  G L+ L  L+++    LEY       L++ E + +  ++ S L    
Sbjct: 999  MEKTAVTVLPENFGNLSSLMILKMQK-DPLEY-------LRTQEQLVVLPNSFSKLSLLE 1050

Query: 372  EIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLE 424
            E+       SG  ++P    KL+    L+       SLPSSLC    L  L +  C++L+
Sbjct: 1051 ELNARAWRISG--KLPDDFEKLSSLDILDLGHNNFSSLPSSLCGLSLLRKLLLPHCEELK 1108

Query: 425  RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
             LP                     +P SL +L +S      C   E++ S +   + LT 
Sbjct: 1109 SLP--------------------PLPPSLEELDVS-----NCFGLETI-SDVSGLERLTL 1142

Query: 485  LEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            L I +C+  + +P  IG L++LK L +
Sbjct: 1143 LNITNCEKVVDIPG-IGCLKFLKRLYM 1168


>gi|167998062|ref|XP_001751737.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696835|gb|EDQ83172.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 515

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 228/510 (44%), Gaps = 31/510 (6%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           +T L  ++ NL SL   D+ + + LT LP +L    +L I D+  C +LT     +  L 
Sbjct: 26  LTSLPKELGNLTSLTTFDISWCEKLTSLPKELDNLTSLTIFDIKECRNLTSLPKELGNLI 85

Query: 136 KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV--- 191
            L   D+ RCK+LTSLP  + +   L    +  C  L +LP     H+  +L +  +   
Sbjct: 86  SLITFDIHRCKNLTSLPKELGNLTSLTTFDISWCEKLTSLPNELGNHI--SLTIFDIKEC 143

Query: 192 -GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
             +  LP  +  LS++    I   K L ++   +  L  L +  IH C NL  L     N
Sbjct: 144 RNLTSLPKELDNLSSLTIFDIIGYKNLTSLPKELGNLISLITFDIHGCKNLTSLPKELRN 203

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +    + +    E       +  SLP       SLT  +I +C N   LP EL NL +L 
Sbjct: 204 LTSLTTFDISWYE-------KLTSLPKELGDLISLTIFDIKECRNLTSLPKELDNLTSLT 256

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
              I    +  +P+ LG L  L   ++  C  L  +   +  L S+ + +IS    L   
Sbjct: 257 ---IFDIKLDIMPKELGNLISLITFDIHGCKNLTSLPKELGNLTSLTTFDISWYEKLTSL 313

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           P+           + I  ++  + +C  L SLP  L    SLT  +I +CK L  LP EL
Sbjct: 314 PK--------ELGDLISLTIFDIKECRNLTSLPKELDNLTSLTIFDISECKNLTSLPKEL 365

Query: 431 GNLEALEELRVEG-TGIREVPKSLA-QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           GNL +L    +     +  +PK L   ++L+   +K+C +  SLP  L    SL   +I 
Sbjct: 366 GNLTSLTTFDISWCEKLTSLPKELGNHISLTIFDIKECRNLTSLPKELDNLTSLIIFDIS 425

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESL 546
           + KN   LP E+GNL  L    I G   +  +P+ LG L+SL    +S    L  +P+ L
Sbjct: 426 EYKNLTSLPKELGNLISLITFDIHGCKNLTSLPKELGNLTSLTTFDISWCEKLTSLPKEL 485

Query: 547 NQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
             L SL    +    NL  +P+ LD L+SL
Sbjct: 486 GDLISLTIFDIKECRNLTSLPKELDNLTSL 515



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 221/524 (42%), Gaps = 82/524 (15%)

Query: 137 LEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
           L   D+  CK+LTSLP  + +   L    +  C  L +LPK                   
Sbjct: 15  LTTFDIKECKNLTSLPKELGNLTSLTTFDISWCEKLTSLPKE------------------ 56

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISS---SIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
                  L N+  L I+  K   N++S    +  L  L +  IHRC NL  L     N+ 
Sbjct: 57  -------LDNLTSLTIFDIKECRNLTSLPKELGNLISLITFDIHRCKNLTSLPKELGNLT 109

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
              +         +  C +  SLP+      SLT  +I +C N   LP EL NL +L   
Sbjct: 110 SLTT-------FDISWCEKLTSLPNELGNHISLTIFDIKECRNLTSLPKELDNLSSLTIF 162

Query: 313 -IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            II    +  LP+ LG L  L   ++  C  L  +   +  L S+ + +IS    L   P
Sbjct: 163 DIIGYKNLTSLPKELGNLISLITFDIHGCKNLTSLPKELRNLTSLTTFDISWYEKLTSLP 222

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLP------SSLCMFK--------------S 411
           +           + I  ++  + +C  L SLP      +SL +F               S
Sbjct: 223 K--------ELGDLISLTIFDIKECRNLTSLPKELDNLTSLTIFDIKLDIMPKELGNLIS 274

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSF 469
           L + +I  CK L  LP ELGNL +L    +     +  +PK L  L +L+   +K+C + 
Sbjct: 275 LITFDIHGCKNLTSLPKELGNLTSLTTFDISWYEKLTSLPKELGDLISLTIFDIKECRNL 334

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSS 528
            SLP  L    SLT  +I +CKN   LP E+GNL  L    I     +  +P+ LG   S
Sbjct: 335 TSLPKELDNLTSLTIFDISECKNLTSLPKELGNLTSLTTFDISWCEKLTSLPKELGNHIS 394

Query: 529 LEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNL 585
           L    + +  NL  +P+ L+ L+SL+   +S   NL  +P+ L  L SL   D+    NL
Sbjct: 395 LTIFDIKECRNLTSLPKELDNLTSLIIFDISEYKNLTSLPKELGNLISLITFDIHGCKNL 454

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNELSEII 627
             +P+ L           TSL  + D+  C KL   P EL ++I
Sbjct: 455 TSLPKEL--------GNLTSLT-TFDISWCEKLTSLPKELGDLI 489



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 118/252 (46%), Gaps = 23/252 (9%)

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL 456
           +L SL   L    +LT+ +I +CK L  LP ELGNL +L    +     +  +PK L  L
Sbjct: 1   RLTSLSKELHNHTTLTTFDIKECKNLTSLPKELGNLTSLTTFDISWCEKLTSLPKELDNL 60

Query: 457 -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-T 514
            +L+   +K+C +  SLP  L    SL + +I  CKN   LP E+GNL  L    I    
Sbjct: 61  TSLTIFDIKECRNLTSLPKELGNLISLITFDIHRCKNLTSLPKELGNLTSLTTFDISWCE 120

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK-LSNNNLERIPERLDPL 572
            +  +P  LG   SL    + +  NL  +P+ L+ LSSL     +   NL  +P+ L  L
Sbjct: 121 KLTSLPNELGNHISLTIFDIKECRNLTSLPKELDNLSSLTIFDIIGYKNLTSLPKELGNL 180

Query: 573 SSLKYLDLFE-NNLDRIPEYLRSFP-------------TSIPSEFTSL-RLSV-DLRNCL 616
            SL   D+    NL  +P+ LR+               TS+P E   L  L++ D++ C 
Sbjct: 181 ISLITFDIHGCKNLTSLPKELRNLTSLTTFDISWYEKLTSLPKELGDLISLTIFDIKECR 240

Query: 617 KLD--PNELSEI 626
            L   P EL  +
Sbjct: 241 NLTSLPKELDNL 252



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 117/277 (42%), Gaps = 43/277 (15%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP------------DLSLAQ- 111
           +NL SL +   K+  +  ++ NL+SL   D+   K LT LP            D+S  + 
Sbjct: 250 DNLTSLTIFDIKLDIMPKELGNLISLITFDIHGCKNLTSLPKELGNLTSLTTFDISWYEK 309

Query: 112 ------------NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
                       +L I D+  C +LT     +  L  L + D+  CK+LTSLP  + +  
Sbjct: 310 LTSLPKELGDLISLTIFDIKECRNLTSLPKELDNLTSLTIFDISECKNLTSLPKELGNLT 369

Query: 159 YLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE---LPSSIKCLSNIGELLIYSCK 215
            L    +  C  L +LPK    H+  T+      I+E   L S  K L N+  L+I+   
Sbjct: 370 SLTTFDISWCEKLTSLPKELGNHISLTI----FDIKECRNLTSLPKELDNLTSLIIFDIS 425

Query: 216 RLENISS---SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
             +N++S    +  L  L +  IH C NL  L     N+    +         +  C + 
Sbjct: 426 EYKNLTSLPKELGNLISLITFDIHGCKNLTSLPKELGNLTSLTT-------FDISWCEKL 478

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
            SLP       SLT  +I +C N   LP EL NL +L
Sbjct: 479 TSLPKELGDLISLTIFDIKECRNLTSLPKELDNLTSL 515


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 207/403 (51%), Gaps = 39/403 (9%)

Query: 4   INSEIQINPYTFSKMTELRLLKF------CGSKNKCMVHSLEGVPFTELRYFEWHQFPLK 57
           ++ +I +    F+ M  LR L F         K       LE +P  +LRY +W  FP K
Sbjct: 356 LSRQIHLKSDAFAMMDGLRFLNFRQHTLSMEDKMHLPPTGLEYLP-NKLRYLKWCGFPSK 414

Query: 58  TLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L      E LV L +  +K+ +LW  VQ++ +L+ IDL  S  LT+LPDLS+A+NL+ L
Sbjct: 415 SLPPSFRTERLVELHLCNNKLVKLWTGVQDVGNLRTIDLSDSPYLTELPDLSMAKNLQCL 474

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
            L  CSSLTE  SS+QYL+KLE +DL  C +L S P  + SK L++LV+  C ++   P 
Sbjct: 475 RLAKCSSLTEVPSSLQYLDKLEEIDLFSCYNLRSFPM-LDSKVLRKLVISRCLDVTKCPT 533

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC---KRLENISSSIFKLQFLESI 233
           ++   +   L L    I+E+P S+   S +  L +  C    +   IS  I +L+ L+  
Sbjct: 534 ISQNMV--WLQLEQTSIKEVPQSVT--SKLERLCLNGCPEITKFPEISGDIERLE-LKGT 588

Query: 234 RIHRCP-NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            I   P ++QFL         TR +     +L +  C + ES P      KSL  L +  
Sbjct: 589 TIKEVPSSIQFL---------TRLR-----DLDMSGCSKLESFPEITGPMKSLVELNLSK 634

Query: 293 CPNFERLP-DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
               +++P     ++ +L RL +DGT I+ELPE    L +L+     +C+ LE +  SI 
Sbjct: 635 T-GIKKIPSSSFKHMISLRRLKLDGTPIKELPELPPSLWILTT---HDCASLETV-ISII 689

Query: 352 KLKSV-ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           K++S+ + ++ +NC  L   P +   ++     ++IP   +K+
Sbjct: 690 KIRSLWDVLDFTNCFKLDQKPLVAAMHLKIQSGDKIPHGGIKM 732



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 35/315 (11%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV----EGTGI 446
           L+L KCS L  +PSSL     L  +++  C  L   P  + + + L +L +    + T  
Sbjct: 474 LRLAKCSSLTEVPSSLQYLDKLEEIDLFSCYNLRSFP--MLDSKVLRKLVISRCLDVTKC 531

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             + +++  L L +  +K+            V+  L  L +  C    + P+  G++E L
Sbjct: 532 PTISQNMVWLQLEQTSIKEVPQ--------SVTSKLERLCLNGCPEITKFPEISGDIERL 583

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           +   +KGT I+EVP S+  L+ L  L +S  + L+  PE    + SLV L LS   +++I
Sbjct: 584 E---LKGTTIKEVPSSIQFLTRLRDLDMSGCSKLESFPEITGPMKSLVELNLSKTGIKKI 640

Query: 566 PER-LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV------------DL 612
           P      + SL+ L L    +  +PE   S       +  SL   +            D 
Sbjct: 641 PSSSFKHMISLRRLKLDGTPIKELPELPPSLWILTTHDCASLETVISIIKIRSLWDVLDF 700

Query: 613 RNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            NC KLD   L   +      QS +   +    M  PG+EIP+WF  +  GS+++++   
Sbjct: 701 TNCFKLDQKPLVAAMH--LKIQSGDKIPHGGIKMVLPGSEIPEWFGEKGIGSSLTMQL-- 756

Query: 673 PTGYNKLMGFAFCVV 687
           P+  ++L G AFC+V
Sbjct: 757 PSNCHQLKGIAFCLV 771



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 61/245 (24%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++GNL+ ++  + D   + ELP+ L     L  L L  CS L  + SS+  L  +E I++
Sbjct: 444 DVGNLRTID--LSDSPYLTELPD-LSMAKNLQCLRLAKCSSLTEVPSSLQYLDKLEEIDL 500

Query: 362 SNCSNLKGFP--------------------------EIPFCNIDGSGIERIPSSV----- 390
            +C NL+ FP                           + +  ++ + I+ +P SV     
Sbjct: 501 FSCYNLRSFPMLDSKVLRKLVISRCLDVTKCPTISQNMVWLQLEQTSIKEVPQSVTSKLE 560

Query: 391 -LKLNKC--------------------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
            L LN C                    + ++ +PSS+     L  L++  C KLE  P+ 
Sbjct: 561 RLCLNGCPEITKFPEISGDIERLELKGTTIKEVPSSIQFLTRLRDLDMSGCSKLESFPEI 620

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQ--LALSKLKLKKCSSFE--SLPSRLYV--SKSLT 483
            G +++L EL +  TGI+++P S  +  ++L +LKL      E   LP  L++  +    
Sbjct: 621 TGPMKSLVELNLSKTGIKKIPSSSFKHMISLRRLKLDGTPIKELPELPPSLWILTTHDCA 680

Query: 484 SLEII 488
           SLE +
Sbjct: 681 SLETV 685


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 195/415 (46%), Gaps = 54/415 (13%)

Query: 7   EIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPF---TELRYFEWHQFPLKTL- 59
           ++ +N  TF +MT LR+L+     G ++  + HS  GV     ++LRY EW+   LK+L 
Sbjct: 540 DLHLNADTFDRMTNLRILRLYVPSGKRSGNVHHS--GVLSKLSSKLRYLEWNGCRLKSLP 597

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
                + LV + MP S VT+LW  VQ+L +L RIDL   K L  +PDLS A  L+ ++L 
Sbjct: 598 KSFCGKMLVEICMPHSHVTELWQGVQDLANLVRIDLSECKHLKNVPDLSKASKLKWVNLS 657

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL + H S+  L+ LE   LD CK++ SL +  H + LK + + GC++LK      S
Sbjct: 658 GCESLCDIHPSVFSLDTLETSTLDGCKNVKSLKSEKHLRSLKEISVIGCTSLKEF--WVS 715

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                 L L   GIE L SSI  L+ +  L +    R  N+ + +F L+ L  +RI  C 
Sbjct: 716 SDSIKGLDLSSTGIEMLDSSIGRLTKLRSLNVEGL-RHGNLPNELFSLKCLRELRICNCR 774

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
                E      DG+R                            SL  L + DC N   L
Sbjct: 775 LAIDKEKLHVLFDGSR----------------------------SLRVLHLKDCCNLSEL 806

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL-KSVES 358
           P+ +  L  L+ L +DG+ ++ LP  +  L  L+ L LKNC  LE    S+ KL  +V  
Sbjct: 807 PENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLNTLSLKNCRMLE----SLPKLPPNVLE 862

Query: 359 IEISNCSNLKGFPEIPFCNI---DGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
              +NC +L+        +     G GI      ++ L  CS L   PS  C+ +
Sbjct: 863 FIATNCRSLRTVSISTLADFALRTGKGI------IVSLQNCSNLLESPSLHCIME 911



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 44/318 (13%)

Query: 157 SKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
           S  L+ L   GC  LK+LPK     +   + +    + EL   ++ L+N+  + +  CK 
Sbjct: 580 SSKLRYLEWNGC-RLKSLPKSFCGKMLVEICMPHSHVTELWQGVQDLANLVRIDLSECKH 638

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L+N+   + K   L+ + +  C +L       C+I  +           L  C   +SL 
Sbjct: 639 LKNVPD-LSKASKLKWVNLSGCESL-------CDIHPSVFSLDTLETSTLDGCKNVKSLK 690

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
           S + + +SL  + +I C + +       +++ L+   +  T I  L   +G+L  L  L 
Sbjct: 691 SEKHL-RSLKEISVIGCTSLKEFWVSSDSIKGLD---LSSTGIEMLDSSIGRLTKLRSLN 746

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           ++       + + +F LK +  + I NC  L    E      DGS               
Sbjct: 747 VEGLRH-GNLPNELFSLKCLRELRICNC-RLAIDKEKLHVLFDGS--------------- 789

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
                        +SL  L + DC  L  LP+ +  L  L ELR++G+ ++ +P ++  L
Sbjct: 790 -------------RSLRVLHLKDCCNLSELPENIWGLSKLHELRLDGSRVKTLPTTIKHL 836

Query: 457 A-LSKLKLKKCSSFESLP 473
             L+ L LK C   ESLP
Sbjct: 837 KRLNTLSLKNCRMLESLP 854



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 34/244 (13%)

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
           + + EL +G+  LA L +++L  C  L+ +   + K   ++ + +S C +L        C
Sbjct: 613 SHVTELWQGVQDLANLVRIDLSECKHLKNVPD-LSKASKLKWVNLSGCESL--------C 663

Query: 377 NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL------------- 423
           +I  S           L+ C  ++SL S   + +SL  + +I C  L             
Sbjct: 664 DIHPSVFSLDTLETSTLDGCKNVKSLKSEKHL-RSLKEISVIGCTSLKEFWVSSDSIKGL 722

Query: 424 -------ERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCS---SFESL 472
                  E L   +G L  L  L VEG     +P  L  L  L +L++  C      E L
Sbjct: 723 DLSSTGIEMLDSSIGRLTKLRSLNVEGLRHGNLPNELFSLKCLRELRICNCRLAIDKEKL 782

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
                 S+SL  L + DC N   LP+ I  L  L  L + G+ ++ +P ++  L  L  L
Sbjct: 783 HVLFDGSRSLRVLHLKDCCNLSELPENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLNTL 842

Query: 533 VLSD 536
            L +
Sbjct: 843 SLKN 846


>gi|302819943|ref|XP_002991640.1| hypothetical protein SELMODRAFT_134000 [Selaginella moellendorffii]
 gi|300140489|gb|EFJ07211.1| hypothetical protein SELMODRAFT_134000 [Selaginella moellendorffii]
          Length = 407

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 52/410 (12%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L+ L L  C+S+TE   S+  L+ LE +DL  C  L +LP SI     LK + L GC +L
Sbjct: 2   LQELVLSVCTSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESL 61

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            +LP                        I  L N+ EL++  C  L+ +   I  L  L 
Sbjct: 62  TSLPP----------------------EIGELRNLRELVLAGCGSLKELPPEIGSLTHLT 99

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           ++ +  C  L  L     N+ G R       EL +  C +  +LP        LT LE+ 
Sbjct: 100 NLDVSHCEQLMLLPQQIGNLTGLR-------ELNMMWCEKLAALPPQVGFLHELTDLELS 152

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           DC N   LP  +G L  L RL + G A ++ELP  +G+L++L +L+LK C  L  + S I
Sbjct: 153 DCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQIGKLSMLERLDLKKCGGLTSLPSEI 212

Query: 351 FKLKSVESIEISNCSNLKGFPE-------IPFCNIDG-SGIERIPSSV--------LKLN 394
             L  ++ + ++ C+ +K  P        +    ++G + ++ +P+ V        L L+
Sbjct: 213 GMLSRLKFLHLNACTGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLD 272

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSL 453
            C+ L SLP+ +   +SL  L +  C  LE LP E+G L  L+ LR++G T + EVP  L
Sbjct: 273 GCTGLTSLPADVGNLESLKRLSLAKCSALEGLPREVGRLPKLKLLRLDGCTSMSEVPAEL 332

Query: 454 AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
             +  L  L L+ C+S  S+P  ++    L +LE++D +    L  ++G+
Sbjct: 333 GHVQTLVNLGLEGCTSLSSIPPGIF---RLPNLELLDLRRCTLLAQDVGS 379



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 198/450 (44%), Gaps = 89/450 (19%)

Query: 90  LKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           L+ + L     +T+LP  L    +LE +DL  C  L     SI  L  L+V+DL  C+SL
Sbjct: 2   LQELVLSVCTSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESL 61

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           TSLP  I   + L+ LVL GC +LK LP                                
Sbjct: 62  TSLPPEIGELRNLRELVLAGCGSLKELPP------------------------------- 90

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK 267
                           I  L  L ++ +  C  L  L     N+ G R       EL + 
Sbjct: 91  ---------------EIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLR-------ELNMM 128

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGL 326
            C +  +LP        LT LE+ DC N   LP  +G L  L RL + G A ++ELP  +
Sbjct: 129 WCEKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQI 188

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
           G+L++L +L+LK C  L  + S I  L  ++ + ++ C+ +K  P         + +  +
Sbjct: 189 GKLSMLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQLP---------AEVGDM 239

Query: 387 PSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
            S V L L  C+ L+ LP+ +   +SL +L +  C  L  LP ++GNLE+L+        
Sbjct: 240 RSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLTSLPADVGNLESLK-------- 291

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
                         +L L KCS+ E LP  +     L  L +  C +   +P E+G+++ 
Sbjct: 292 --------------RLSLAKCSALEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQT 337

Query: 506 LKVLTIKG-TAIREVPESLGQLSSLEWLVL 534
           L  L ++G T++  +P  + +L +LE L L
Sbjct: 338 LVNLGLEGCTSLSSIPPGIFRLPNLELLDL 367



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 183/370 (49%), Gaps = 20/370 (5%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           I ELP S+  L ++  + + +C +L  +  SI +L  L+ + +  C +L  L      + 
Sbjct: 13  ITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELR 72

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             R       EL L  C   + LP        LT+L++  C     LP ++GNL  L  L
Sbjct: 73  NLR-------ELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLREL 125

Query: 313 -IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            ++    +  LP  +G L  L+ LEL +C  L  +  +I KL  ++ + +  C++LK   
Sbjct: 126 NMMWCEKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLK--- 182

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           E+P      S +ER     L L KC  L SLPS + M   L  L +  C  +++LP E+G
Sbjct: 183 ELPPQIGKLSMLER-----LDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQLPAEVG 237

Query: 432 NLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           ++ +L EL +EG T ++ +P  + QL +L  L L  C+   SLP+ +   +SL  L +  
Sbjct: 238 DMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLTSLPADVGNLESLKRLSLAK 297

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN 547
           C     LP E+G L  LK+L + G T++ EVP  LG + +L  L L    +L  IP  + 
Sbjct: 298 CSALEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIPPGIF 357

Query: 548 QLSSLVSLKL 557
           +L +L  L L
Sbjct: 358 RLPNLELLDL 367



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 15/310 (4%)

Query: 66  NLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSS 123
           NL  L + G   + +L  ++ +L  L  +D+ + + L  LP  +     L  L++ +C  
Sbjct: 73  NLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWCEK 132

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT---S 179
           L      + +L++L  L+L  CK+L  LP +I     LKRL LRGC++LK LP      S
Sbjct: 133 LAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQIGKLS 192

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
              R  L   G G+  LPS I  LS +  L + +C  ++ + + +  ++ L  + +  C 
Sbjct: 193 MLERLDLKKCG-GLTSLPSEIGMLSRLKFLHLNACTGIKQLPAEVGDMRSLVELGLEGCT 251

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           +L+ L      +   RS E     L L  C    SLP+     +SL  L +  C   E L
Sbjct: 252 SLKGL---PAQVGQLRSLEN----LGLDGCTGLTSLPADVGNLESLKRLSLAKCSALEGL 304

Query: 300 PDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           P E+G L  L  L +DG T++ E+P  LG +  L  L L+ C+ L  I   IF+L ++E 
Sbjct: 305 PREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIPPGIFRLPNLEL 364

Query: 359 IEISNCSNLK 368
           +++  C+ L 
Sbjct: 365 LDLRRCTLLA 374



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 35/268 (13%)

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPF 375
           T+I ELP+ LG L  L  ++L  C +L  +  SI +L +++ ++++ C +L   P EI  
Sbjct: 11  TSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIG- 69

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                   E      L L  C  L+ LP  +     LT+L++  C++L  LP ++GNL  
Sbjct: 70  --------ELRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNL-- 119

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
                   TG+RE            L +  C    +LP ++     LT LE+ DCKN   
Sbjct: 120 --------TGLRE------------LNMMWCEKLAALPPQVGFLHELTDLELSDCKNLPE 159

Query: 496 LPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLV 553
           LP  IG L  LK L ++G A ++E+P  +G+LS LE L L     L  +P  +  LS L 
Sbjct: 160 LPVTIGKLSCLKRLHLRGCAHLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLK 219

Query: 554 SLKLSN-NNLERIPERLDPLSSLKYLDL 580
            L L+    ++++P  +  + SL  L L
Sbjct: 220 FLHLNACTGIKQLPAEVGDMRSLVELGL 247


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 203/416 (48%), Gaps = 58/416 (13%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFC---GSKNKCMVH----SLEGVPFTELRYFEWHQ 53
           MS ++ +I +    F+ M  LR L       SK   ++H     LE +P  ELRYF W +
Sbjct: 570 MSMLSRQIHLKSDAFAMMDGLRFLNIYFSRYSKEDKILHLPPTGLEYLP-NELRYFLWSR 628

Query: 54  FPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           FPLK+L      E+LV L +  SK+ +LW  V+++ +L+RIDL  S  LT+LPDLS+A+N
Sbjct: 629 FPLKSLPPSFRAEHLVELHLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKN 688

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  LDL  C SLTE  SS+QYL+KLE + L RC +L S P  + SK L+ L++  C ++ 
Sbjct: 689 LVSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPM-LDSKVLRFLLISRCLDVT 747

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIK------CLSNIGELLIYSCKRLENISSSIFK 226
             P ++       L L    I+E+P S+       CLS   E+      +   IS  I  
Sbjct: 748 TCPTISQN--MEWLWLEQTSIKEVPQSVTGKLERLCLSGCPEI-----TKFPEISGDIEI 800

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSG 278
           L                      ++ GT  KE PSS         L +  C + ESLP  
Sbjct: 801 L----------------------DLRGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEI 838

Query: 279 QCMFKSLTSLEIIDCPNFERLPDEL-GNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
               +SL SL++      + +P  L  ++ +L  L +DGT I+ LPE    L  L+    
Sbjct: 839 TVPMESLHSLKLSKT-GIKEIPSSLIKHMISLTFLNLDGTPIKALPELPPSLRYLTT--- 894

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            +C+ LE ++SSI   +    ++ +NC  L   P +   ++     E IP   +++
Sbjct: 895 HDCASLETVTSSINIGRLELGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGGIQM 950



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 168/364 (46%), Gaps = 64/364 (17%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREV 449
            + L+    L  LP  L M K+L SL++ DC  L  +P  L  L+ LE++ +     +R  
Sbjct: 669  IDLSDSPYLTELPD-LSMAKNLVSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSF 727

Query: 450  P----KSLAQLALSK-LKLKKC--------------SSFESLPSRLYVSKSLTSLEIIDC 490
            P    K L  L +S+ L +  C              +S + +P    V+  L  L +  C
Sbjct: 728  PMLDSKVLRFLLISRCLDVTTCPTISQNMEWLWLEQTSIKEVPQS--VTGKLERLCLSGC 785

Query: 491  KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQL 549
                + P+  G++E   +L ++GTAI+EVP S+  L+ LE L +S  + L+ +PE    +
Sbjct: 786  PEITKFPEISGDIE---ILDLRGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPM 842

Query: 550  SSLVSLKLSNNNLERIPERL-DPLSSLKYLDLFENNLDRIPE------YLRSFPTSIPSE 602
             SL SLKLS   ++ IP  L   + SL +L+L    +  +PE      YL +   +    
Sbjct: 843  ESLHSLKLSKTGIKEIPSSLIKHMISLTFLNLDGTPIKALPELPPSLRYLTTHDCASLET 902

Query: 603  FTS------LRLSVDLRNCLKLDPNEL----------SEIIKDGWMKQSVNGETYITKSM 646
             TS      L L +D  NC KLD   L           E I DG ++            M
Sbjct: 903  VTSSINIGRLELGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGGIQ------------M 950

Query: 647  YFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRK 706
              PG+EIP+WF  +  GS+++++   P+  ++L G AFC+V    +        V+DD  
Sbjct: 951  VLPGSEIPEWFGDKGIGSSLTMQL--PSNCHQLKGIAFCLVFLLPLPSHDMPYEVDDDID 1008

Query: 707  CNLF 710
             NL+
Sbjct: 1009 VNLY 1012



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 66/273 (24%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIREL 322
           + L   P    LP    M K+L SL++ DCP+   +P  L  L  L ++ +     +R  
Sbjct: 669 IDLSDSPYLTELPD-LSMAKNLVSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSF 727

Query: 323 P---EGLGQLALLSK-LELKNC----SELEYISSSIFKLKSV--------ESIEISNCSN 366
           P     + +  L+S+ L++  C      +E++      +K V        E + +S C  
Sbjct: 728 PMLDSKVLRFLLISRCLDVTTCPTISQNMEWLWLEQTSIKEVPQSVTGKLERLCLSGCPE 787

Query: 367 LKGFPEIP----FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID--- 419
           +  FPEI       ++ G+ I+ +PSS+                   + LT LE++D   
Sbjct: 788 ITKFPEISGDIEILDLRGTAIKEVPSSI-------------------QFLTRLEVLDMSG 828

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS-------------------- 459
           C KLE LP+    +E+L  L++  TGI+E+P SL +  +S                    
Sbjct: 829 CSKLESLPEITVPMESLHSLKLSKTGIKEIPSSLIKHMISLTFLNLDGTPIKALPELPPS 888

Query: 460 --KLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
              L    C+S E++ S + + +    L+  +C
Sbjct: 889 LRYLTTHDCASLETVTSSINIGRLELGLDFTNC 921


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 182/355 (51%), Gaps = 26/355 (7%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWE--NLVS 69
           P  FS+M +LRLL F   +N  + + LE    +ELRY +W  +PL+ L I   E   L+ 
Sbjct: 580 PILFSRMHQLRLLNF---RNVRLKNKLEYSIPSELRYLKWKGYPLEFLPIDSSEECKLIE 636

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L M  S + Q W   +NLV LK I L  S+ L+K P+ +   NL+ L+L  C+SL   H 
Sbjct: 637 LHMCHSNLKQFWQQEKNLVELKYIKLNSSQKLSKTPNFANIPNLKRLELEDCTSLVNIHP 696

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPL 188
           SI    KL  L L  C +LT+LP+ I+ K L+ L+L GCS +K +P+ +    R   L L
Sbjct: 697 SIFTAEKLIFLSLKDCINLTNLPSHINIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHL 756

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL------- 241
            G  I  LPSSI  LS++  L + +CK L +IS++I ++  L+S+ +  C  L       
Sbjct: 757 DGTSISNLPSSIASLSHLTILSLANCKMLIDISNAI-EMTSLQSLDVSGCSKLGSRKGKG 815

Query: 242 QFLEMPSCNIDGTRSKEQPSS------ELKLKKCPRPES----LPSGQCMFKSLTSLEII 291
             +E+   N+  T  + +         E+ L  C  P +    +PS   ++ SLT L + 
Sbjct: 816 DNVELGEVNVRETTRRRRNDDCNNIFKEIFLWLCNTPATGIFGIPSLAGLY-SLTKLNLK 874

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           DC N E +P  +  + +L  L + G     LP  + +L  L +L +  C +L + 
Sbjct: 875 DC-NLEVIPQGIECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHF 928



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 174/405 (42%), Gaps = 64/405 (15%)

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI-DGSGIERIPSSV------ 390
            KN  EL+YI     KL S  S ++S   N    P +    + D + +  I  S+      
Sbjct: 652  KNLVELKYI-----KLNS--SQKLSKTPNFANIPNLKRLELEDCTSLVNIHPSIFTAEKL 704

Query: 391  --LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
              L L  C  L +LPS + + K L  L +  C K++++P+  GN   L +L ++GT I  
Sbjct: 705  IFLSLKDCINLTNLPSHINI-KVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISN 763

Query: 449  VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE--- 504
            +P S+A L+ L+ L L  C     + + + ++ SL SL++  C        +  N+E   
Sbjct: 764  LPSSIASLSHLTILSLANCKMLIDISNAIEMT-SLQSLDVSGCSKLGSRKGKGDNVELGE 822

Query: 505  ----------------------YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII 542
                                  +L +     T I  +P SL  L SL  L L D NL++I
Sbjct: 823  VNVRETTRRRRNDDCNNIFKEIFLWLCNTPATGIFGIP-SLAGLYSLTKLNLKDCNLEVI 881

Query: 543  PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEY---------- 591
            P+ +  + SLV L LS NN   +P  +  L +LK L + +   L   P+           
Sbjct: 882  PQGIECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSK 941

Query: 592  ----LRSFPTSIPSEFTSLRLSVDLRNCLKLDPN-ELSEIIKDGWMKQSVNGETYITKSM 646
                L+ F      +   +   V+L NC ++  N +   +I     K      T+   ++
Sbjct: 942  DCISLKDFIDISKVDNLYIMKEVNLLNCYQMANNKDFHRLIISSMQKMFFRKGTF---NI 998

Query: 647  YFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
              PG+EIP WF  +  GS++ ++         ++ FA CVV+  S
Sbjct: 999  MIPGSEIPDWFTTRKMGSSVCMEWDPDAPNTNMIRFALCVVIGLS 1043


>gi|168068813|ref|XP_001786216.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661901|gb|EDQ48971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 188/402 (46%), Gaps = 67/402 (16%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L  L +  CSSLT   + +  L  L  L++  C SLTSLP  + +   L  L +RGCS+L
Sbjct: 2   LTTLIINKCSSLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSSL 61

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
             LP                   EL +    L+++  L IY C  L ++ + +  L  L 
Sbjct: 62  TTLPN------------------ELGN----LTSLTILDIYGCSSLTSLPNELGNLTSLT 99

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           ++ +  C NL  L                               P+   M  SLT+L + 
Sbjct: 100 TLNMEWCSNLTLL-------------------------------PNELGMLTSLTTLNMK 128

Query: 292 DCPNFERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
            C +   LP+ELGNL +L  L I + +++  LP  LG L  L+ L++  CS L  + + +
Sbjct: 129 CCKSLILLPNELGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDIYGCSSLTSLPNEL 188

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMF 409
             L S+ ++ I  CS+L   P           +  + S + L +  C+KL SLP+ L   
Sbjct: 189 GNLTSLTTLNIRECSSLTTLPN---------ELGNVTSLTTLHIGWCNKLTSLPNELGNL 239

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKCS 467
            SLT+L++  C KL  LP+ELGNL +L  L +E    +  +P  L  L +L+ L +K C 
Sbjct: 240 TSLTTLDMGLCTKLTSLPNELGNLTSLTRLNIEWCSRLTSLPNELGMLTSLTTLNMKCCK 299

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           S  SLP+ L    SLT L+I  C +   LP+E+GN+  L  L
Sbjct: 300 SLTSLPNELGNLISLTILDIYGCSSLTSLPNELGNVTSLTTL 341



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 175/344 (50%), Gaps = 27/344 (7%)

Query: 209 LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK 268
           L+I  C  L ++ + +  L  L ++ +  C +L  L     N+    +       L ++ 
Sbjct: 5   LIINKCSSLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTT-------LNIRG 57

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLG 327
           C    +LP+      SLT L+I  C +   LP+ELGNL +L  L ++  + +  LP  LG
Sbjct: 58  CSSLTTLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWCSNLTLLPNELG 117

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDG 380
            L  L+ L +K C  L  + + +  L S+ ++ I  CS+L   P        +   +I G
Sbjct: 118 MLTSLTTLNMKCCKSLILLPNELGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDIYG 177

Query: 381 -SGIERIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
            S +  +P+        + L + +CS L +LP+ L    SLT+L I  C KL  LP+ELG
Sbjct: 178 CSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNELGNVTSLTTLHIGWCNKLTSLPNELG 237

Query: 432 NLEALEELRVE-GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           NL +L  L +   T +  +P  L  L +L++L ++ CS   SLP+ L +  SLT+L +  
Sbjct: 238 NLTSLTTLDMGLCTKLTSLPNELGNLTSLTRLNIEWCSRLTSLPNELGMLTSLTTLNMKC 297

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL 532
           CK+   LP+E+GNL  L +L I G +++  +P  LG ++SL  L
Sbjct: 298 CKSLTSLPNELGNLISLTILDIYGCSSLTSLPNELGNVTSLTTL 341



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 187/402 (46%), Gaps = 62/402 (15%)

Query: 89  SLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKS 147
           SL  + +     LT LP+ L +  +L  L++  C SLT   + +  L  L  L++  C S
Sbjct: 1   SLTTLIINKCSSLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSS 60

Query: 148 LTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           LT+LP  + +   L  L + GCS+L +LP                   EL +    L+++
Sbjct: 61  LTTLPNELGNLTSLTILDIYGCSSLTSLPN------------------ELGN----LTSL 98

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
             L +  C  L  + + +  L  L ++ +  C +L  L     N+    +       L +
Sbjct: 99  TTLNMEWCSNLTLLPNELGMLTSLTTLNMKCCKSLILLPNELGNLTSLTT-------LNI 151

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEG 325
           ++C    +LP+      SLT L+I  C +   LP+ELGNL +L  L I + +++  LP  
Sbjct: 152 RECSSLITLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNE 211

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           LG +  L+ L +  C++L  + + +  L S+ ++++  C+ L   P     N+  + + R
Sbjct: 212 LGNVTSLTTLHIGWCNKLTSLPNELGNLTSLTTLDMGLCTKLTSLPN-ELGNL--TSLTR 268

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
                L +  CS+L SLP+ L M  SLT+L +  CK L  LP+ELGNL +L  L + G  
Sbjct: 269 -----LNIEWCSRLTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYG-- 321

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
                               CSS  SLP+ L    SLT+L++
Sbjct: 322 --------------------CSSLTSLPNELGNVTSLTTLDM 343



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 139/261 (53%), Gaps = 23/261 (8%)

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIR 447
           + L +NKCS L SLP+ L M  SLT+L +  C  L  LP+ELGNL +L  L + G + + 
Sbjct: 3   TTLIINKCSSLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSSLT 62

Query: 448 EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            +P  L  L +L+ L +  CSS  SLP+ L    SLT+L +  C N   LP+E+G L  L
Sbjct: 63  TLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWCSNLTLLPNELGMLTSL 122

Query: 507 KVLTIKGT-AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLE 563
             L +K   ++  +P  LG L+SL  L + + ++L  +P  L  L+SL  L +   ++L 
Sbjct: 123 TTLNMKCCKSLILLPNELGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDIYGCSSLT 182

Query: 564 RIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFP-------------TSIPSEFTSLR-- 607
            +P  L  L+SL  L++ E ++L  +P  L +               TS+P+E  +L   
Sbjct: 183 SLPNELGNLTSLTTLNIRECSSLTTLPNELGNVTSLTTLHIGWCNKLTSLPNELGNLTSL 242

Query: 608 LSVDLRNCLKLD--PNELSEI 626
            ++D+  C KL   PNEL  +
Sbjct: 243 TTLDMGLCTKLTSLPNELGNL 263



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 153/308 (49%), Gaps = 24/308 (7%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
            +T L +++ NL SL  ++++    LT LP+ L    +L ILD+  CSSLT   + +  L
Sbjct: 36  SLTSLPNELGNLTSLTTLNIRGCSSLTTLPNELGNLTSLTILDIYGCSSLTSLPNELGNL 95

Query: 135 NKLEVLDLDRCKSLTSLP---------TSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST 185
             L  L+++ C +LT LP         T+++ K  K L+L   + L NL  +T+ ++R  
Sbjct: 96  TSLTTLNMEWCSNLTLLPNELGMLTSLTTLNMKCCKSLILLP-NELGNLTSLTTLNIREC 154

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
             L+      LP+ +  L+++  L IY C  L ++ + +  L  L ++ I  C +L  L 
Sbjct: 155 SSLI-----TLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNIRECSSLTTLP 209

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
               N+    +       L +  C +  SLP+      SLT+L++  C     LP+ELGN
Sbjct: 210 NELGNVTSLTT-------LHIGWCNKLTSLPNELGNLTSLTTLDMGLCTKLTSLPNELGN 262

Query: 306 LQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           L +L RL I+  + +  LP  LG L  L+ L +K C  L  + + +  L S+  ++I  C
Sbjct: 263 LTSLTRLNIEWCSRLTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYGC 322

Query: 365 SNLKGFPE 372
           S+L   P 
Sbjct: 323 SSLTSLPN 330



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 123/235 (52%), Gaps = 24/235 (10%)

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKCSS 468
           SLT+L I  C  L  LP+ELG L +L  L ++  G +  +P  L  L +L+ L ++ CSS
Sbjct: 1   SLTTLIINKCSSLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSS 60

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLS 527
             +LP+ L    SLT L+I  C +   LP+E+GNL  L  L ++  + +  +P  LG L+
Sbjct: 61  LTTLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWCSNLTLLPNELGMLT 120

Query: 528 SLEWLVLS-DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNL 585
           SL  L +    +L ++P  L  L+SL +L +   ++L  +P  L  L+SL  LD+     
Sbjct: 121 SLTTLNMKCCKSLILLPNELGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDI----- 175

Query: 586 DRIPEYLRSFPTSIPSEFTSLR--LSVDLRNCLKLD--PNELSEI-----IKDGW 631
                Y  S  TS+P+E  +L    ++++R C  L   PNEL  +     +  GW
Sbjct: 176 -----YGCSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNELGNVTSLTTLHIGW 225



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 62/263 (23%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVL 140
           +++ NL SL  ++++    L  LP+ L    +L ILD+  CSSLT   + +  L  L  L
Sbjct: 138 NELGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTL 197

Query: 141 DLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG----IEEL 196
           ++  C SLT+LP                + L N+  +T+ H         +G    +  L
Sbjct: 198 NIRECSSLTTLP----------------NELGNVTSLTTLH---------IGWCNKLTSL 232

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS 256
           P+ +  L+++  L +  C +L ++ + +  L  L  + I  C                  
Sbjct: 233 PNELGNLTSLTTLDMGLCTKLTSLPNELGNLTSLTRLNIEWC------------------ 274

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG 316
                         R  SLP+   M  SLT+L +  C +   LP+ELGNL +L  L I G
Sbjct: 275 -------------SRLTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYG 321

Query: 317 -TAIRELPEGLGQLALLSKLELK 338
            +++  LP  LG +  L+ L+++
Sbjct: 322 CSSLTSLPNELGNVTSLTTLDME 344


>gi|168047550|ref|XP_001776233.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672466|gb|EDQ59003.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 610

 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 245/499 (49%), Gaps = 32/499 (6%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L SL + G S +T L + + NL SL  ++L     LT LP+ L    +L +L+L  
Sbjct: 112 NLTSLTSLNLSGCSNLTSLPNGLGNLTSLIFLNLSRCSRLTLLPNALGNLTSLTLLNLSE 171

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMT 178
           C  L    + +  L  L  LD++ C+SL SLP  + +   L  L L GCS L  LP ++ 
Sbjct: 172 CFRLISLPNQLGNLTSLTTLDVENCQSLASLPNELGNLTSLTFLNLSGCSRLTLLPNELG 231

Query: 179 SCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           +    + L L G   +  LP+ +  L+++  + +  C  L ++ + +  L  L  + +  
Sbjct: 232 NLTSLTLLNLSGCSNLTSLPNELGNLTSLTSINLSECLNLISLPNKLGNLTSLTLLNLSE 291

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C  L  L     N+      +         +C +  SLP+      SL  L + +C    
Sbjct: 292 CSRLILLPNELGNLKSLTLLKL-------SRCWKLISLPNELGNLTSLILLNLSECSRLT 344

Query: 298 RLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LP+ELGNL +L  L + G + +  LP  LG    L+ L L+ C +L  + + +  L S+
Sbjct: 345 SLPNELGNLTSLTSLNLSGCSNLTSLPNELGNFTSLAMLNLRRCWKLISLPNELGNLTSL 404

Query: 357 ESIEISNCSNLKGFPE-------IPFCNIDG-SGIERIPSSV--------LKLNKCSKLE 400
            S+ +S CS L   P        + F N+ G S +  +P+ +        L L++CS L 
Sbjct: 405 ISLNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSSLT 464

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-AL 458
           SLP  L    SL  L+I  C+ L  LP ELGN+  L  L +EG + +  +PK L  L +L
Sbjct: 465 SLPKELGKLSSLIELDIGGCESLTSLPKELGNITTLISLNLEGCSSLTSLPKELGNLTSL 524

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIR 517
           +KL ++KCSS  SLP  L    SL++  +  C + + LP E+GNL  L  L ++G +++ 
Sbjct: 525 TKLDIRKCSSLISLPKELGNLTSLSTCNLEGCSSLISLPKELGNLTSLNTLNLEGCSSLT 584

Query: 518 EVPESLGQLSSLEWLVLSD 536
            +P  L   +SL  L ++D
Sbjct: 585 SLPNELFNFTSLTILRIND 603



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 251/511 (49%), Gaps = 52/511 (10%)

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
            L   ++ +C  LTSLP  + ++  L  L L  CSNL +LP      L + + L+ V + 
Sbjct: 43  SLTACEVTKCSKLTSLPNELGNRTSLTSLNLSRCSNLTSLPN----ELGNLISLIFVNLS 98

Query: 195 E------LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           E      LP+ +  L+++  L +  C  L ++ + +  L  L  + + RC  L  L    
Sbjct: 99  ECLNLTSLPNKLGNLTSLTSLNLSGCSNLTSLPNGLGNLTSLIFLNLSRCSRLTLLP--- 155

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
            N  G  +     +     +C R  SLP+      SLT+L++ +C +   LP+ELGNL +
Sbjct: 156 -NALGNLTSLTLLNL---SECFRLISLPNQLGNLTSLTTLDVENCQSLASLPNELGNLTS 211

Query: 309 LNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           L  L + G + +  LP  LG L  L+ L L  CS L  + + +  L S+ SI +S C NL
Sbjct: 212 LTFLNLSGCSRLTLLPNELGNLTSLTLLNLSGCSNLTSLPNELGNLTSLTSINLSECLNL 271

Query: 368 KGFPE--------IPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKS 411
              P               + S +  +P+ +        LKL++C KL SLP+ L    S
Sbjct: 272 ISLPNKLGNLTSLTLLNLSECSRLILLPNELGNLKSLTLLKLSRCWKLISLPNELGNLTS 331

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSF 469
           L  L + +C +L  LP+ELGNL +L  L + G + +  +P  L    +L+ L L++C   
Sbjct: 332 LILLNLSECSRLTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNFTSLAMLNLRRCWKL 391

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSS 528
            SLP+ L    SL SL + +C     LP+E+GNL  L  L + G + +  +P  LG L+S
Sbjct: 392 ISLPNELGNLTSLISLNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLLPNELGNLTS 451

Query: 529 LEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLD 586
           L  L LS+ ++L  +P+ L +LSSL+ L +    +L  +P+ L  +++L  L+L      
Sbjct: 452 LISLNLSECSSLTSLPKELGKLSSLIELDIGGCESLTSLPKELGNITTLISLNL------ 505

Query: 587 RIPEYLRSFPTSIPSEFTSLR--LSVDLRNC 615
              E   S  TS+P E  +L     +D+R C
Sbjct: 506 ---EGCSSL-TSLPKELGNLTSLTKLDIRKC 532



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 144/452 (31%), Positives = 211/452 (46%), Gaps = 46/452 (10%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
           ++  L + + NL SL  +D++  + L  LP+ L    +L  L+L  CS LT   + +  L
Sbjct: 174 RLISLPNQLGNLTSLTTLDVENCQSLASLPNELGNLTSLTFLNLSGCSRLTLLPNELGNL 233

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------------MTSCH 181
             L +L+L  C +LTSLP  + +   L  + L  C NL +LP             ++ C 
Sbjct: 234 TSLTLLNLSGCSNLTSLPNELGNLTSLTSINLSECLNLISLPNKLGNLTSLTLLNLSECS 293

Query: 182 LRSTLPL-LGVG-------------IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
               LP  LG               +  LP+ +  L+++  L +  C RL ++ + +  L
Sbjct: 294 RLILLPNELGNLKSLTLLKLSRCWKLISLPNELGNLTSLILLNLSECSRLTSLPNELGNL 353

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
             L S+ +  C NL  L     N           + L L++C +  SLP+      SL S
Sbjct: 354 TSLTSLNLSGCSNLTSLPNELGNFTSL-------AMLNLRRCWKLISLPNELGNLTSLIS 406

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYI 346
           L + +C     LP+ELGNL +L  L + G + +  LP  LG L  L  L L  CS L  +
Sbjct: 407 LNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSSLTSL 466

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
              + KL S+  ++I  C +L   P+      +   I  + S  L L  CS L SLP  L
Sbjct: 467 PKELGKLSSLIELDIGGCESLTSLPK------ELGNITTLIS--LNLEGCSSLTSLPKEL 518

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLK 464
               SLT L+I  C  L  LP ELGNL +L    +EG + +  +PK L  L +L+ L L+
Sbjct: 519 GNLTSLTKLDIRKCSSLISLPKELGNLTSLSTCNLEGCSSLISLPKELGNLTSLNTLNLE 578

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            CSS  SLP+ L+   SLT L I DC N   L
Sbjct: 579 GCSSLTSLPNELFNFTSLTILRINDCSNLTSL 610



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 124/238 (52%), Gaps = 23/238 (9%)

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPKSLAQL-ALSKLKLKKC 466
           + SLT+ E+  C KL  LP+ELGN  +L  L +   + +  +P  L  L +L  + L +C
Sbjct: 41  YSSLTACEVTKCSKLTSLPNELGNRTSLTSLNLSRCSNLTSLPNELGNLISLIFVNLSEC 100

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQ 525
            +  SLP++L    SLTSL +  C N   LP+ +GNL  L  L + + + +  +P +LG 
Sbjct: 101 LNLTSLPNKLGNLTSLTSLNLSGCSNLTSLPNGLGNLTSLIFLNLSRCSRLTLLPNALGN 160

Query: 526 LSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE- 582
           L+SL  L LS+   L  +P  L  L+SL +L + N  +L  +P  L  L+SL +L+L   
Sbjct: 161 LTSLTLLNLSECFRLISLPNQLGNLTSLTTLDVENCQSLASLPNELGNLTSLTFLNLSGC 220

Query: 583 NNLDRIPEYLR-------------SFPTSIPSEFTSLR--LSVDLRNCLKLD--PNEL 623
           + L  +P  L              S  TS+P+E  +L    S++L  CL L   PN+L
Sbjct: 221 SRLTLLPNELGNLTSLTLLNLSGCSNLTSLPNELGNLTSLTSINLSECLNLISLPNKL 278



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 21/177 (11%)

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSDN- 537
            SLT+ E+  C     LP+E+GN   L  L + + + +  +P  LG L SL ++ LS+  
Sbjct: 42  SSLTACEVTKCSKLTSLPNELGNRTSLTSLNLSRCSNLTSLPNELGNLISLIFVNLSECL 101

Query: 538 NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
           NL  +P  L  L+SL SL LS  +NL  +P  L  L+SL +L+L   + L  +P  L + 
Sbjct: 102 NLTSLPNKLGNLTSLTSLNLSGCSNLTSLPNGLGNLTSLIFLNLSRCSRLTLLPNALGNL 161

Query: 596 PT-------------SIPSEFTSLR--LSVDLRNCLKLD--PNELSEIIKDGWMKQS 635
            +             S+P++  +L    ++D+ NC  L   PNEL  +    ++  S
Sbjct: 162 TSLTLLNLSECFRLISLPNQLGNLTSLTTLDVENCQSLASLPNELGNLTSLTFLNLS 218


>gi|298204574|emb|CBI23849.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 253/565 (44%), Gaps = 104/565 (18%)

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNC-SELEYISSS--IFKLKSVESIEISNCS 365
           LN  ++ G  I  + + L  + +L  L+  +C  +LE ++ +     L+S+++I +S CS
Sbjct: 278 LNTGVLSG-GINVIEKTLHSMRVLIVLDDVDCPQQLEVLAGNHNCIHLESLQTITLSGCS 336

Query: 366 NLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFK 410
            LK FPE+       P  ++ G+ I+ +P S+        L L +C  LESLP  +   K
Sbjct: 337 KLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLK 396

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           SL +L + +C +L++LP+   N+E+L++L ++ TG+RE+P S+  L  L  LKLK C   
Sbjct: 397 SLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKL 456

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            SLP  +    SL +L +  C    +LPD++G+L+ L  L   GT I+EVP S+  L+ L
Sbjct: 457 ASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKL 516

Query: 530 EWLVLS--------DNNLQII----------PESLNQLSSLVSLKLSNNNL--ERIPERL 569
           E L L+          NL +           P  L  L SL  L LS  NL    +P  L
Sbjct: 517 EVLSLAGCKGGESKSRNLALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSDL 576

Query: 570 DPLSSLKYLDLFEN------NLDRIP----------EYLRSFPT---------------- 597
             LS L+ LDL  N      NL R+P          + LRS P                 
Sbjct: 577 SSLSWLECLDLSRNSFITVPNLSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSL 636

Query: 598 ---SIPSEFTSLR----LSVDLRNCLKLDPNELSE----IIKDGWMKQSVN---GETYIT 643
              S PS   + R    L+    NC +L  NE S+    I++   +  S++      Y  
Sbjct: 637 ETFSNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDNVEAILRGIRLVASISNFVAPHYEL 696

Query: 644 K--SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESV 701
           K      PG+ IP+WF  QS G +++++ P      +LMG A C V   ++         
Sbjct: 697 KWYDAVVPGSSIPEWFTDQSLGCSVTVELPPHWCTTRLMGLAVCFVFHPNIGM------- 749

Query: 702 EDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEF-- 759
               K    +      S G+  + ++        ++DH++ G     GE      D    
Sbjct: 750 ---GKFGRSEYFSMNESGGFSLHNTA---STHFSKADHIWFGYRPLYGEVFSPSIDHLKV 803

Query: 760 -FFHIDRSCCEVKKCGIHFVHAQRQ 783
            F   +R+   VKKCG   V  Q +
Sbjct: 804 SFAGSNRAGEVVKKCGARLVFEQDE 828



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 144/339 (42%), Gaps = 61/339 (17%)

Query: 155 IHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP---LLGVGIEELPSSIKCLSNIGELLI 211
           IH + L+ + L GCS LK  P++        LP   L G  I+ LP SI+ L+ +  L +
Sbjct: 322 IHLESLQTITLSGCSKLKKFPEVQGA--MDNLPELSLKGTAIKGLPLSIEYLNGLSLLNL 379

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSSE 263
             CK LE++   IFKL+ L+++ +  C  L+ L         +    +D T  +E PSS 
Sbjct: 380 EECKSLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSI 439

Query: 264 LKLK--------KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
             L          C +  SLP   C   SL +L +  C   ++LPD++G+LQ L +L  +
Sbjct: 440 EHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKAN 499

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
           GT I+E+P  +  L  L  L L  C   E  S +                       +  
Sbjct: 500 GTGIQEVPTSITLLTKLEVLSLAGCKGGESKSRN-----------------------LAL 536

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLE 434
           C      +   P+  L+          PS L +  SL  L +  C  LE  LP +L +L 
Sbjct: 537 C------LRSSPTKGLR----------PSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLS 580

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            LE L +       VP       L +L L+ C S  SLP
Sbjct: 581 WLECLDLSRNSFITVPNLSRLPRLKRLILEHCKSLRSLP 619



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 173/396 (43%), Gaps = 58/396 (14%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLV-SLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
           N +H E+L ++ + G    + + +VQ  + +L  + LK + +      +     L +L+L
Sbjct: 320 NCIHLESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNL 379

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
             C SL      I  L  L+ L L  C  L  LP                 N+++L K  
Sbjct: 380 EECKSLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQE-------------NMESLKK-- 424

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                  L L   G+ ELPSSI+ L+ +  L + +CK+L ++  SI KL  L+++ +  C
Sbjct: 425 -------LFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGC 477

Query: 239 PNLQFL--EMPSCN------IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
             L+ L  +M S         +GT  +E P+S   L K    E L    C      S  +
Sbjct: 478 SELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKL---EVLSLAGCKGGESKSRNL 534

Query: 291 IDC----PNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELE 344
             C    P     P  L  L +L +L + G  + E  LP  L  L+ L  L+L   S + 
Sbjct: 535 ALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSRNSFIT 594

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL-- 402
               ++ +L  ++ + + +C +L+  PE+P      S IE+     L  N C+ LE+   
Sbjct: 595 V--PNLSRLPRLKRLILEHCKSLRSLPELP------SNIEK-----LLANDCTSLETFSN 641

Query: 403 PSSLCMFKSLTSL--EIIDCKKLERLPDELGNLEAL 436
           PSS   +++   L  +  +C +L    ++  N+EA+
Sbjct: 642 PSSAYAWRNSRHLNFQFYNCFRLVE-NEQSDNVEAI 676


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 207/457 (45%), Gaps = 77/457 (16%)

Query: 42  PFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
           P  ELRY  W  +PL  L +      LV L +  S + +LW   ++L  LK IDL YS+ 
Sbjct: 508 PSYELRYLCWDGYPLDFLPSNFDGGKLVELHLHCSNIKRLWLGNKDLERLKVIDLSYSRK 567

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
           L ++ + S   NLE L L  C SL + H S+  L KL  L L  C  L +LP SI   + 
Sbjct: 568 LIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLES 627

Query: 160 LKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           L+ L L  CS  +  P K  +      L L    I++LP SI  L ++  L +  C + E
Sbjct: 628 LEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFE 687

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
                   ++ L  + +                  T  K+ P S                
Sbjct: 688 KFPEKGGNMKSLNQLLLRN----------------TAIKDLPDS---------------- 715

Query: 279 QCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
                 L SLE +D     FE+ P++ GN+++LN+L++  TAI++LP+ +G L  L  L+
Sbjct: 716 ---IGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLD 772

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           L +CS+ E        +KS++ + + N                 + I+ +P S+  L   
Sbjct: 773 LSDCSKFEKFPEKGGNMKSLKKLRLRN-----------------TAIKDLPDSIGDL--- 812

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
                        KSL  L++ DC K E+ P++ GN++ L EL ++ T I+++P ++++L
Sbjct: 813 -------------KSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRL 859

Query: 457 -ALSKLKLKKCSS-FESLPSRLYVSKSLTSLEIIDCK 491
             L +L L  CS  +E L S      +L  L I  CK
Sbjct: 860 KKLKRLVLSDCSDLWEGLISNQLC--NLQKLNISQCK 894



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 265/583 (45%), Gaps = 109/583 (18%)

Query: 237  RCPNLQFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            R PNL+ L +  C    +I  +    +  + L L+ C + ++LP      +SL  L +  
Sbjct: 576  RMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSY 635

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C  FE+ P + GN+++L +L +  TAI++LP+ +G L  L  L+L +CS+ E        
Sbjct: 636  CSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGN 695

Query: 353  LKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIP---SSVLKLNKC----SK 398
            +KS+  + + N + +K  P+       +   ++ GS  E+ P    ++  LN+     + 
Sbjct: 696  MKSLNQLLLRNTA-IKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRNTA 754

Query: 399  LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
            ++ LP S+   +SL SL++ DC K E+ P++ GN+++L++LR+  T I+++P S+  L  
Sbjct: 755  IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDL-- 812

Query: 459  SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
                                 KSL  L++ DC  F + P++ GN++ L+ L +K TAI++
Sbjct: 813  ---------------------KSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKD 851

Query: 519  VPESLGQLSSLEWLVLSDNNLQIIPESL--NQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
            +P ++ +L  L+ LVLSD     + E L  NQL +L  L +S                  
Sbjct: 852  LPTNISRLKKLKRLVLSD--CSDLWEGLISNQLCNLQKLNISQC---------------- 893

Query: 577  YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL-KLDPNELSEIIKDGWMKQS 635
                      ++   +   P+S+          +D  +C  K D + L  +    W+K +
Sbjct: 894  ----------KMAGQILVLPSSLE--------EIDAYHCTSKEDLSGLLWLCHLNWLKST 935

Query: 636  VNG-ETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK---LMGFAFCVVVACS 691
                + +   ++    N IP+W R+Q+ GS ++  T  PT + +    +GF    VV+C 
Sbjct: 936  TEELKCWKLVAVIRESNGIPEWIRYQNMGSEVT--TELPTNWYEDPHFLGF----VVSCV 989

Query: 692  VSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVF------LGSS 745
                 RH    D    ++ D++C+    G       + GK    +S   F      +   
Sbjct: 990  Y----RHIPTSDFDYRDV-DLMCELNLHG---NGFEFKGKCYRYDSPGNFKDLIDQVCVW 1041

Query: 746  IFAGENSCKRSDEFFFHIDRS----CCEVKKCGIHFVHAQRQR 784
             +      K     + HI+ S      E+KKCGI  + A  Q+
Sbjct: 1042 WYPKIAIRKEHHHKYTHINASFRGHWTEIKKCGIDLIFAGDQQ 1084


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 235/495 (47%), Gaps = 55/495 (11%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           LDL Y S LT   + I  L  LE L+L  C  LT +P  I     L+RL L G S L ++
Sbjct: 32  LDL-YNSQLTSVPAEIGQLTSLEKLNL-YCNQLTIVPAEIGQLALLERLRL-GGSKLTSV 88

Query: 175 P----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           P    ++TS      L L G  +  +P+ I  L+++ +L +Y C +L  + + I +L  L
Sbjct: 89  PAEIGQLTSL---VELNLGGNRLTSVPAEIGQLTSLEKLNLY-CNQLTIVPAEIGQLALL 144

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS--------SELKLKKCPRPESLPSGQCMF 282
           E +                N+DG +    P+        +EL L +  +  SLP+     
Sbjct: 145 ERL----------------NLDGNQLTSVPAEIGQLTSLTELDLGRN-KLTSLPTEIWQL 187

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            SLT L +        +P E+G L +L  L +    +  +P  +GQLA L KL L N ++
Sbjct: 188 TSLTCLHL-QGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDN-NQ 245

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           L  + + I +L S+  +++S       F  +     +   +  +    L +NK +++   
Sbjct: 246 LASVPAEIGRLTSLTEVDLS-------FNRLTSVPAEIGQLTSLTELHLHINKLTRV--- 295

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           P+ +    SL  L + D  +L  +P E+G L +LE L + G  +  VP  + QLA  +  
Sbjct: 296 PAEIGQLASLVRLRL-DNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERL 354

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L   +   S+P+ +     LTSLE +         +P EIG L  LK L + G  +  VP
Sbjct: 355 LLYGNQLTSVPAEI---GQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVP 411

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
             +GQL+SL+ L L DN L  +P  + QL+SL  L L++N L  +P  +  L+S++ LDL
Sbjct: 412 AEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDL 471

Query: 581 FENNLDRIPEYLRSF 595
             N L  +P  +R  
Sbjct: 472 RCNELTSVPAAIREL 486



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 215/462 (46%), Gaps = 78/462 (16%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH-----RCPN--LQFLEMPS 248
           +P+ I  L+++ +L +Y C +L  + + I +L  LE +R+        P    Q   +  
Sbjct: 42  VPAEIGQLTSLEKLNLY-CNQLTIVPAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVE 100

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID--CPNFERLPDELGNL 306
            N+ G R    P+                       LTSLE ++  C     +P E+G L
Sbjct: 101 LNLGGNRLTSVPAE-------------------IGQLTSLEKLNLYCNQLTIVPAEIGQL 141

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI------- 359
             L RL +DG  +  +P  +GQL  L++L+L   ++L  + + I++L S+  +       
Sbjct: 142 ALLERLNLDGNQLTSVPAEIGQLTSLTELDLGR-NKLTSLPTEIWQLTSLTCLHLQGNQL 200

Query: 360 -----EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLC 407
                EI   ++LKG       ++  + +  +P+ + +L    KL        S+P+ + 
Sbjct: 201 TSVPAEIGQLASLKGL------DLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIG 254

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
              SLT +++    +L  +P E+G L +L EL +    +  VP  + QLA L +L+L   
Sbjct: 255 RLTSLTEVDL-SFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDN- 312

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
           +   S+P+ +     LTSLE +         +P EIG L  L+ L + G  +  VP  +G
Sbjct: 313 NQLTSVPAEI---GQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIG 369

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENN 584
           QL+SLEWL L+ N L  +P  + QL+SL  L L  N L  +P  +  L+SL+ L L +N 
Sbjct: 370 QLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQ 429

Query: 585 LDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           L R+P  +         + TSL         L L+ N+LS +
Sbjct: 430 LTRVPAEI--------GQLTSL-------TVLGLNSNQLSSL 456



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 25/346 (7%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+G L AL  L +  + +  +P  +GQL  L KL L  C++L  + + I +L  +E 
Sbjct: 19  VPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLY-CNQLTIVPAEIGQLALLER 77

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEI 417
           + +   S L   P         + I ++ +S+++LN   ++L S+P+ +    SL  L +
Sbjct: 78  LRLGG-SKLTSVP---------AEIGQL-TSLVELNLGGNRLTSVPAEIGQLTSLEKLNL 126

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
             C +L  +P E+G L  LE L ++G  +  VP  + QL +L++L L + +   SLP+ +
Sbjct: 127 Y-CNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGR-NKLTSLPTEI 184

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
           +   SLT L  +       +P EIG L  LK L +    +  VP  +GQL+SLE L L +
Sbjct: 185 WQLTSLTCLH-LQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDN 243

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           N L  +P  + +L+SL  + LS N L  +P  +  L+SL  L L  N L R+P  +    
Sbjct: 244 NQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLA 303

Query: 597 TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
           + +       RL +D  N L   P E+ ++    W+    N  T +
Sbjct: 304 SLV-------RLRLD-NNQLTSVPAEIGQLTSLEWLGLGGNQLTSV 341



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 169/380 (44%), Gaps = 48/380 (12%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWE 65
           +++ I P    ++  L  L   G  N+      E    T L   +  +  L +L    W+
Sbjct: 129 NQLTIVPAEIGQLALLERLNLDG--NQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQ 186

Query: 66  --NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEIL------ 116
             +L  L + G+++T +  ++  L SLK +DL Y+  LT +P ++    +LE L      
Sbjct: 187 LTSLTCLHLQGNQLTSVPAEIGQLASLKGLDL-YNNQLTSVPAEIGQLASLEKLRLDNNQ 245

Query: 117 ------DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
                 ++G  +SLTE   S   L  +   ++ +  SLT L   +H   L R V      
Sbjct: 246 LASVPAEIGRLTSLTEVDLSFNRLTSVPA-EIGQLTSLTEL--HLHINKLTR-VPAEIGQ 301

Query: 171 LKNLPK-------MTSCHLR----STLPLLGVGIEEL---PSSIKCLSNIGELLIYSCKR 216
           L +L +       +TS        ++L  LG+G  +L   P+ I  L+++  LL+Y   +
Sbjct: 302 LASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYG-NQ 360

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L ++ + I +L  LE + +    N   L      I    S +    EL L       S+P
Sbjct: 361 LTSVPAEIGQLTSLEWLGL----NGNILTSVPAEIGQLTSLK----ELYLHGN-ELTSVP 411

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
           +      SL  L + D     R+P E+G L +L  L ++   +  LP  +GQL  + +L+
Sbjct: 412 AEIGQLTSLQRLYLGDN-QLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVERLD 470

Query: 337 LKNCSELEYISSSIFKLKSV 356
           L+ C+EL  + ++I +L++ 
Sbjct: 471 LR-CNELTSVPAAIRELRAA 489


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 216/448 (48%), Gaps = 57/448 (12%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL-NILH 63
            E+ I+     ++ + + ++  G KN  +   L+G+ +   ++R   W  +    L +  +
Sbjct: 616  ELNISEKALERIHDFQFVRING-KNHALHERLQGLIYQSPQIRSLHWKCYQNICLPSTFN 674

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             E LV L M  SK+ +LW+  + L +LK +DL YS  L +LP+LS A NLE L L  CSS
Sbjct: 675  SEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSS 734

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP-------- 175
            L E  SSI+ L  L++LDL RC SL  LP+  ++  L+ L L  CS+L  LP        
Sbjct: 735  LVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLENCSSLVKLPPSINANNL 794

Query: 176  ---KMTSCHLRSTLPLLGVGIE-------------ELPSSIKCLSNIGELLIYSCKRLEN 219
                +T+C     LP +                  ELP SI   +N+  L    C  L  
Sbjct: 795  QELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVK 854

Query: 220  ISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
            + SSI  +  LE   +  C NL  +E+PS +I   R      + L ++ C + E+LP+  
Sbjct: 855  LPSSIGDMTNLEVFYLSNCSNL--VELPS-SIGNLRKL----TLLLMRGCSKLETLPTN- 906

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
               KSL +L +IDC   +  P+   +++ L RLI  GTAI+E+P  +   + L+  ++  
Sbjct: 907  INLKSLHTLNLIDCSRLKSFPEISTHIKYL-RLI--GTAIKEVPLSIMSWSPLAHFQI-- 961

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSK 398
             S  E +      L  +  +++S     K   E+P        ++R+     L+LN C+ 
Sbjct: 962  -SYFESLKEFPHALDIITELQLS-----KDIQEVP------PWVKRMSRLRALRLNNCNN 1009

Query: 399  LESLPSSLCMFKSLTSLEIIDCKKLERL 426
            L SLP    +  SL  L   +CK LERL
Sbjct: 1010 LVSLPQ---LPDSLAYLYADNCKSLERL 1034



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 242/555 (43%), Gaps = 130/555 (23%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
            ELKL+ C     LPS     + LTSL+I+D                L+R     +++ EL
Sbjct: 726  ELKLRNCSSLVELPSS---IEKLTSLQILD----------------LHRC----SSLVEL 762

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            P   G    L  L L+NCS L  +  SI    +++ + ++NCS +   P I         
Sbjct: 763  P-SFGNATKLEILNLENCSSLVKLPPSI-NANNLQELSLTNCSRVVELPAI--------- 811

Query: 383  IERIPSSVLKLN--KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
                 +++ KLN   CS L  LP S+    +L  L+   C  L +LP  +G++  LE   
Sbjct: 812  --ENATNLWKLNLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFY 869

Query: 441  VEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            +   + + E+P S+  L  L+ L ++ CS  E+LP+ + + KSL +L +IDC      P+
Sbjct: 870  LSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINL-KSLHTLNLIDCSRLKSFPE 928

Query: 499  EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS--------------------DNN 538
               +++YL+++   GTAI+EVP S+   S L    +S                      +
Sbjct: 929  ISTHIKYLRLI---GTAIKEVPLSIMSWSPLAHFQISYFESLKEFPHALDIITELQLSKD 985

Query: 539  LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDLFENNLDRIP 589
            +Q +P  + ++S L +L+L+N NNL  +P+  D L+        SL+ LD   NN    P
Sbjct: 986  IQEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNN----P 1041

Query: 590  EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFP 649
            E    FP                  C KL+  E  ++I            T        P
Sbjct: 1042 EIRLYFP-----------------KCFKLN-QEARDLIM----------HTSTRNFAMLP 1073

Query: 650  GNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDR 705
            G ++P  F H++T G ++ +K   +P PT     + F  C+++         +E +  D 
Sbjct: 1074 GTQVPACFNHRATSGDSLKIKLKESPLPTT----LTFKACIMLV--------NEEMSYDL 1121

Query: 706  KCNLFDVVC-DRRSEGYDSYTSSYLGKIS-HVESDHVFLGSSIFAGENSCKRSDEFFFH- 762
            K    D+V  D +++     T SY      +V ++H++     F  E     S E  F  
Sbjct: 1122 KSMSVDIVIRDEQNDLKVQCTPSYHQCTEIYVLTEHIY----TFELEVEEVTSTELVFEF 1177

Query: 763  --IDRSCCEVKKCGI 775
              ++ S C++ +CGI
Sbjct: 1178 TSVNESICKIGECGI 1192



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 190/397 (47%), Gaps = 69/397 (17%)

Query: 144  RCKSLTSLPTSIHSKYLKRL---------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
            +C     LP++ +S++L  L         +  G   L+NL  M   +           ++
Sbjct: 662  KCYQNICLPSTFNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSY--------SSYLK 713

Query: 195  ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            ELP+ +   +N+ EL + +C  L  + SSI KL  L+ + +HRC +L  +E+PS    G 
Sbjct: 714  ELPN-LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSL--VELPSF---GN 767

Query: 255  RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP--DELGNLQALNRL 312
             +K +    L L+ C     LP       +L  L + +C     LP  +   NL  LN  
Sbjct: 768  ATKLEI---LNLENCSSLVKLPPS-INANNLQELSLTNCSRVVELPAIENATNLWKLN-- 821

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            +++ +++ ELP  +G    L  L+ + CS L  + SSI  + ++E   +SNCSNL   P 
Sbjct: 822  LLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELP- 880

Query: 373  IPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
                    S I  +   ++L +  CSKLE+LP+++ + KSL +L +IDC +L+  P+   
Sbjct: 881  --------SSIGNLRKLTLLLMRGCSKLETLPTNINL-KSLHTLNLIDCSRLKSFPEIST 931

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP---------SRLYVSKS- 481
            +++ L   R+ GT I+EVP S+  ++ S L   + S FESL          + L +SK  
Sbjct: 932  HIKYL---RLIGTAIKEVPLSI--MSWSPLAHFQISYFESLKEFPHALDIITELQLSKDI 986

Query: 482  ------------LTSLEIIDCKNFMRLPDEIGNLEYL 506
                        L +L + +C N + LP    +L YL
Sbjct: 987  QEVPPWVKRMSRLRALRLNNCNNLVSLPQLPDSLAYL 1023


>gi|224114331|ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1119

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 241/541 (44%), Gaps = 121/541 (22%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N +  +L Y   S F LK +    S+ ++   +  G P + 
Sbjct: 435 KSLPAGL-QVDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLE 493

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C  +  LPS+L M +SL    +  C KLE+
Sbjct: 494 SLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLEM-ESLKVCILDGCSKLEK 552

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L  LR++GTGI E+  S+  L  L  L +K C + +S+PS +   KSL  
Sbjct: 553 FPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKK 612

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L++  C  F  +P+ +G +E L+   + GT+IR+ P S+  L +L+  VLS +  + I E
Sbjct: 613 LDLFGCSEFENIPENLGKVESLEEFDVSGTSIRQPPASIFLLKNLK--VLSFDGCKRIAE 670

Query: 545 SLNQ-----LSSLVSLKL----------------------------SNNNLERIPERLDP 571
           SL       LS L SL++                            S NN   +P  ++ 
Sbjct: 671 SLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSINQ 730

Query: 572 LSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL----DPNELSE- 625
           LS L+ L L +   L+ +PE        +PS+  +L    +L  C++L    DP ELS  
Sbjct: 731 LSGLEMLALEDCTMLESLPE--------VPSKVQTL----NLNGCIRLKEIPDPTELSSS 778

Query: 626 -----IIKDGWMKQSVNGETYITKSM-----------------YFPGNEIPKWFRHQSTG 663
                I  + W   + NGE  +  +M                   PGNEIP WF HQS G
Sbjct: 779 KRSEFICLNCWELYNHNGEDSMGLTMLERYLEGLSNPRPGFGIAIPGNEIPGWFNHQSMG 838

Query: 664 STISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDS 723
           S+IS++ P  +     MGF  CV  +             +    +LF   C  ++ G ++
Sbjct: 839 SSISVQVPSWS-----MGFVACVAFSA------------NGESPSLF---CHFKANGREN 878

Query: 724 YTSSYLGKISHVE--SDHVFLGSSIFAGENSCKR-------SDEFFFHIDRSCCEVKKCG 774
           Y S      ++++  SDH++L    F      K        + E  FH  +   +VK CG
Sbjct: 879 YPSPMCISCNYIQVLSDHIWLFYLSFDHLKELKEWKHESYSNIELSFHSFQPGVKVKNCG 938

Query: 775 I 775
           +
Sbjct: 939 V 939



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 200/390 (51%), Gaps = 31/390 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +L + EWH +P K+L   L  +
Sbjct: 389 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPENLS-NKLLFLEWHSYPSKSLPAGLQVD 444

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++  +LK I+L  S  LTK PD +   NLE L L  C+SL+
Sbjct: 445 ELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLESLILEGCTSLS 504

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ Y  KL+ ++L  C+S+  LP+++  + LK  +L GCS L+  P +  + +   
Sbjct: 505 EVHPSLGYHKKLQYVNLMDCESVRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNCLM 564

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP----- 239
            L L G GIEEL SSI  L  +  L + +CK L++I SSI  L+ L+ + +  C      
Sbjct: 565 VLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENI 624

Query: 240 --NLQFLE-MPSCNIDGTRSKEQPSSELKLKK--------CPR-PESLPSGQC-MFKSLT 286
             NL  +E +   ++ GT  ++ P+S   LK         C R  ESL   +      L 
Sbjct: 625 PENLGKVESLEEFDVSGTSIRQPPASIFLLKNLKVLSFDGCKRIAESLTDQRLPSLSGLC 684

Query: 287 SLEIID-CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           SLE++D C    R   LP+++G L +L  L +       LP  + QL+ L  L L++C+ 
Sbjct: 685 SLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEMLALEDCTM 744

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           LE +     K   V+++ ++ C  LK  P+
Sbjct: 745 LESLPEVPSK---VQTLNLNGCIRLKEIPD 771


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 206/413 (49%), Gaps = 69/413 (16%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF----CGSKNKCMV--HSLEGVPFTELRYFEWHQF 54
           +SKI  ++ ++  +F+KMT +R LKF      SK K  +  + L+ +   +LR+ +WH +
Sbjct: 545 LSKI-EDLHLSFDSFTKMTNVRFLKFYYGKWSSKGKIYLPKNGLKSLS-DKLRHLQWHGY 602

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
            L++L +    + LV L MP S + +LWD VQNLV+LK IDL+Y + L ++PDLS A NL
Sbjct: 603 CLESLPSTFSAKFLVELVMPYSNLQKLWDGVQNLVNLKDIDLRYCENLVEVPDLSKATNL 662

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           E L L  C SL + H SI  L KL+ LDL+ C  + SL + +H + L+ L L  CS+LK 
Sbjct: 663 EDLSLSQCKSLRQVHPSILSLPKLQSLDLEGCIEIQSLQSDVHLESLQDLRLSNCSSLKE 722

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
              M S  LR  L L G  I+ELP+S                                  
Sbjct: 723 FSVM-SVELRR-LWLDGTHIQELPAS---------------------------------- 746

Query: 234 RIHRCPNLQFLEMPSC-NIDGTRSK--EQPSS----ELKLKKCPR--PESLPSGQCMFKS 284
            I  C  L+F+++  C N+DG   K    P +     L L  C +    +L       +S
Sbjct: 747 -IWGCTKLKFIDVQGCDNLDGFGDKLSYDPRTTCFNSLVLSGCKQLNASNLDFILVGMRS 805

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE-- 342
           LTSLE+ +C N   LPD +G L +L  L +  + +  LP  +  L  L +L L +C +  
Sbjct: 806 LTSLELENCFNLRTLPDSIGLLSSLKLLKLSRSNVESLPASIENLVKLRRLYLDHCMKLV 865

Query: 343 -LEYISSSIFKLKSVESIEISNCSNL-KGFPE--IPFCNIDGSGIERIPSSVL 391
            L  +  S++ L +V      NC++L   F +  IPF      G+E +P SV 
Sbjct: 866 SLPELPESLWLLSAV------NCASLVTNFTQLNIPFQL--KQGLEDLPQSVF 910



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 180/420 (42%), Gaps = 112/420 (26%)

Query: 283 KSLTSLEIID---CPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
           ++L +L+ ID   C N   +PD  +  NL+ L+  +    ++R++   +  L  L  L+L
Sbjct: 634 QNLVNLKDIDLRYCENLVEVPDLSKATNLEDLS--LSQCKSLRQVHPSILSLPKLQSLDL 691

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKL 393
           + C E++ + S +  L+S++ + +SNCS+LK F     E+    +DG+ I+ +P+S+   
Sbjct: 692 EGCIEIQSLQSDV-HLESLQDLRLSNCSSLKEFSVMSVELRRLWLDGTHIQELPASIWG- 749

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS- 452
             C+KL+ +             ++  C  L+   D+L                   P++ 
Sbjct: 750 --CTKLKFI-------------DVQGCDNLDGFGDKLSY----------------DPRTT 778

Query: 453 -LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
               L LS  K    S+ + +   L   +SLTSLE+ +C N   LPD IG L  LK+L +
Sbjct: 779 CFNSLVLSGCKQLNASNLDFI---LVGMRSLTSLELENCFNLRTLPDSIGLLSSLKLLKL 835

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
             + +  +P S+  L  L  L L D+ ++++                  +L  +PE L  
Sbjct: 836 SRSNVESLPASIENLVKLRRLYL-DHCMKLV------------------SLPELPESLWL 876

Query: 572 LSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
           LS++    L  N                   FT L +   L+  L+  P           
Sbjct: 877 LSAVNCASLVTN-------------------FTQLNIPFQLKQGLEDLP----------- 906

Query: 632 MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
                       +S++ PG+ +P+ F   + G+++++  P     + L G  FCV ++ S
Sbjct: 907 ------------QSVFLPGDHVPERFSFHAEGASVTI--PHLPLSDLLCGLIFCVFLSQS 952


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 52/407 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMV-HSLEGVPFTELRYFEWHQFPLKTLNIL-HW 64
           E   NP  F+KM  LRLL      NK  + H L+ +P + L+   W + PL++L I    
Sbjct: 591 EASWNPEAFAKMGNLRLLMIL---NKLQLQHGLKCLP-SGLKVLVWKECPLESLPIGDQS 646

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           + LV L M  SK+  LW   + L +LK I+LK SK L + PD +   NLE LDL  C +L
Sbjct: 647 DELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINL 706

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR- 183
            E H+S+  L K+  + L+ CK+L SLP  +    LKRL+L GC++++ LP         
Sbjct: 707 VEVHASLGLLKKISYVTLEDCKNLKSLPGKLEMNSLKRLILTGCTSVRKLPDFGESMTNL 766

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP---- 239
           STL L  + + ELP +I  L+ +  LL+  CK + ++  +  KL+ L+ + +  C     
Sbjct: 767 STLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSK 826

Query: 240 ---NLQFLEMPSC-NIDGTRSKEQPSSELKLKK------------CPRPES--LPSGQCM 281
              NL   E   C N+  T  +E PSS + LK                 ES  LP G+  
Sbjct: 827 LPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSESSLLPLGRIF 886

Query: 282 ---------------FKSLTSLEIID---CPNF-ERLPDELGNLQALNRLIIDGTAIREL 322
                          F  L+SL+ +D   C  + E +PD+LG L +L  L I G     L
Sbjct: 887 GFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNL 946

Query: 323 PEG-LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
            +G + +L  L +L L +C  L+ + +      +V  +  S+CS+LK
Sbjct: 947 RDGCISKLLKLERLVLSSCQNLQSLPNLP---PNVHFVNTSDCSSLK 990



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 189/452 (41%), Gaps = 72/452 (15%)

Query: 240  NLQFLEMPSCNIDGTRSKEQPSSELKLKKC-PRPESLPSGQCMFKSLTSLEIIDCPNFER 298
             L+ L    C ++     +Q    + L  C  + + L  G  +  +L ++ + +     +
Sbjct: 626  GLKVLVWKECPLESLPIGDQSDELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQ 685

Query: 299  LPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
             PD  G +  L +L ++G   + E+   LG L  +S + L++C  L+ +   + ++ S++
Sbjct: 686  TPDFTG-IPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCKNLKSLPGKL-EMNSLK 743

Query: 358  SIEISNCSNLKGFPEI--PFCNIDGSGIERIPSSVLK-------------LNKCSKLESL 402
             + ++ C++++  P+      N+    ++ IP + L              L  C  + SL
Sbjct: 744  RLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSL 803

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
            P +    KSL  L +  C K  +LPD L   EALE L V  T IREVP S+  L      
Sbjct: 804  PDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHL------ 857

Query: 463  LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE- 521
                             K+L SL    CK   R  +       L +  I G      P+ 
Sbjct: 858  -----------------KNLISLLFHGCKGLARNSES----SLLPLGRIFGFGTHPTPKK 896

Query: 522  ----SLGQLSSLEWLVLSDNNL--QIIPESLNQLSSLVSLKLSNNNLERIPER-LDPLSS 574
                S   LSSL+ L LS  NL  + IP+ L  LSSLV+L +S NN   + +  +  L  
Sbjct: 897  LILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLK 956

Query: 575  LKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL----DPNELSEIIKD 629
            L+ L L    NL  +P    + P ++    TS        +C  L    DP E+   +  
Sbjct: 957  LERLVLSSCQNLQSLP----NLPPNVHFVNTS--------DCSSLKPLSDPQEIWGHLA- 1003

Query: 630  GWMKQSVNGETYITKSMYFPGNEIPKWFRHQS 661
             +    +     I   +  PGNEIP  F +Q+
Sbjct: 1004 SFAFDKLQDANQIKTLLVGPGNEIPSTFFYQN 1035


>gi|15237409|ref|NP_199438.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177707|dbj|BAB11081.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007977|gb|AED95360.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1205

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 194/381 (50%), Gaps = 31/381 (8%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFC----GSKNKCMV-HSLEGVPFTELRYFEWHQFPL 56
           SKI+ E+ ++   F +M  LR LK      G +N+  +  S + +P T L+   W +FP+
Sbjct: 538 SKID-ELCVHESAFKRMRNLRFLKIGTDIFGEENRLHLPESFDYLPPT-LKLLCWSEFPM 595

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           + + +    +NLV+LKM  SK+ +LW+    L  LK +DL  S  L ++PDLS+A NLE 
Sbjct: 596 RCMPSNFCPKNLVTLKMTNSKLHKLWEGAVPLTCLKEMDLDGSVNLKEIPDLSMATNLET 655

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L+   C SL E  S IQ LNKL  L++  C SL +LPT  + K L R+    CS L+  P
Sbjct: 656 LNFENCKSLVELPSFIQNLNKLLKLNMAFCNSLETLPTGFNLKSLNRIDFTKCSKLRTFP 715

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI----YSCKRLENISSSIFKL---- 227
             ++    S L L G  IEELPS++  L N+ +L I       K+ E +   +  L    
Sbjct: 716 DFSTN--ISDLYLTGTNIEELPSNLH-LENLIDLRISKKEIDGKQWEGVMKPLKPLLAML 772

Query: 228 -QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
              L S+++   PNL  +E+P C+       E     L +  C   E+LP+G    +SL 
Sbjct: 773 SPTLTSLQLQNIPNL--VELP-CSFQNLIQLEV----LDITNCRNLETLPTG-INLQSLD 824

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           SL    C      P+   N+ +LN   ++ T I E+P  + + + L  L +  CS L+ +
Sbjct: 825 SLSFKGCSRLRSFPEISTNISSLN---LEETGIEEVPWWIDKFSNLGLLSMDRCSRLKCV 881

Query: 347 SSSIFKLKSVESIEISNCSNL 367
           S  I KLK +  ++  +C  L
Sbjct: 882 SLHISKLKRLGKVDFKDCGAL 902



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 54/416 (12%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLS 333
           +PS  C  K+L +L++ +     +L +    L  L  + +DG+  ++E+P+ L     L 
Sbjct: 598 MPSNFCP-KNLVTLKMTNS-KLHKLWEGAVPLTCLKEMDLDGSVNLKEIPD-LSMATNLE 654

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L  +NC  L  + S I  L  +  + ++ C++L+  P         +G      + +  
Sbjct: 655 TLNFENCKSLVELPSFIQNLNKLLKLNMAFCNSLETLP---------TGFNLKSLNRIDF 705

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR-----VEGTGIRE 448
            KCSKL + P     F +  S   +    +E LP  L +LE L +LR     ++G     
Sbjct: 706 TKCSKLRTFPD----FSTNISDLYLTGTNIEELPSNL-HLENLIDLRISKKEIDGKQWEG 760

Query: 449 VPKSLAQL------ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
           V K L  L       L+ L+L+   +   LP        L  L+I +C+N   LP  I N
Sbjct: 761 VMKPLKPLLAMLSPTLTSLQLQNIPNLVELPCSFQNLIQLEVLDITNCRNLETLPTGI-N 819

Query: 503 LEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-N 560
           L+ L  L+ KG + +R  PE    +SSL    L +  ++ +P  +++ S+L  L +   +
Sbjct: 820 LQSLDSLSFKGCSRLRSFPEISTNISSLN---LEETGIEEVPWWIDKFSNLGLLSMDRCS 876

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSL----RLSVDLRNCL 616
            L+ +   +  L  L  +D  +     I + L   P  +  E  ++    ++ +D R+C 
Sbjct: 877 RLKCVSLHISKLKRLGKVDFKDCGALTIVD-LCGCPIGMEMEANNIDTVSKVKLDFRDCF 935

Query: 617 KLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGN-EIPKWFRHQSTGSTISLKTP 671
            LDP  +            ++ E+ I K M FPG  E+P +F +++TGS+ SL  P
Sbjct: 936 NLDPETV------------LHQESIIFKYMLFPGKEEMPSYFTYRTTGSS-SLTIP 978



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 17/191 (8%)

Query: 62  LHWENLVSLKMPGSKVT-QLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           LH ENL+ L++   ++  + W+ V          +K  K L  +    L+  L  L L  
Sbjct: 738 LHLENLIDLRISKKEIDGKQWEGV----------MKPLKPLLAM----LSPTLTSLQLQN 783

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
             +L E   S Q L +LEVLD+  C++L +LPT I+ + L  L  +GCS L++ P++++ 
Sbjct: 784 IPNLVELPCSFQNLIQLEVLDITNCRNLETLPTGINLQSLDSLSFKGCSRLRSFPEISTN 843

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
              S+L L   GIEE+P  I   SN+G L +  C RL+ +S  I KL+ L  +    C  
Sbjct: 844 --ISSLNLEETGIEEVPWWIDKFSNLGLLSMDRCSRLKCVSLHISKLKRLGKVDFKDCGA 901

Query: 241 LQFLEMPSCNI 251
           L  +++  C I
Sbjct: 902 LTIVDLCGCPI 912



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 73/261 (27%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L +  C   E+LP+G  + KSL  ++   C      PD   N+   + L + GT I EL
Sbjct: 679 KLNMAFCNSLETLPTGFNL-KSLNRIDFTKCSKLRTFPDFSTNI---SDLYLTGTNIEEL 734

Query: 323 P-----------------------EGLGQ-----LALLS----KLELKNCSELEYISSSI 350
           P                       EG+ +     LA+LS     L+L+N   L  +  S 
Sbjct: 735 PSNLHLENLIDLRISKKEIDGKQWEGVMKPLKPLLAMLSPTLTSLQLQNIPNLVELPCSF 794

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             L  +E ++I+NC N                                LE+LP+ + + +
Sbjct: 795 QNLIQLEVLDITNCRN--------------------------------LETLPTGINL-Q 821

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
           SL SL    C +L   P+   N+ +L    +E TGI EVP  + + + L  L + +CS  
Sbjct: 822 SLDSLSFKGCSRLRSFPEISTNISSLN---LEETGIEEVPWWIDKFSNLGLLSMDRCSRL 878

Query: 470 ESLPSRLYVSKSLTSLEIIDC 490
           + +   +   K L  ++  DC
Sbjct: 879 KCVSLHISKLKRLGKVDFKDC 899


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 28/359 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EWH +P K+L + L  +
Sbjct: 550 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPEDLS-NELRFIEWHSYPSKSLPSGLQVD 605

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  LTK PDL+   NLE L L  C+SL+
Sbjct: 606 ELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLS 665

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  KL+ ++L  CKS+  LP ++  + L    L GCS L+  P +  + +   
Sbjct: 666 EVHPSLAHHKKLQYVNLVNCKSIRILPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELM 725

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+++
Sbjct: 726 VLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYI 785

Query: 245 --------EMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLP--SGQCMFKSLT 286
                    +   +  GT  ++ P+S         L L  C R   LP  SG C   SL 
Sbjct: 786 PEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCKRIVVLPSLSGLC---SLE 842

Query: 287 SLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            L +  C   E  LP+++G L +L  L +       LP+ + QL  L  L L++C+ LE
Sbjct: 843 VLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLE 901



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 209/453 (46%), Gaps = 64/453 (14%)

Query: 290 IIDCPNFERLPDELGNLQALNRL---IIDGTAIRELPEGLGQ------------LALLSK 334
            +D P  +     +     ++RL    ID   + E PE L               +L S 
Sbjct: 542 FLDMPGIKEAQWNMKAFSKMSRLRLLKIDNVQLSEGPEDLSNELRFIEWHSYPSKSLPSG 601

Query: 335 LELKNCSELEYISSSIFKL----KSVESIEISNCSN---------LKGFPEIPFCNIDG- 380
           L++    EL   +SS+ +L    KS  +++I N SN         L G P +    ++G 
Sbjct: 602 LQVDELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGC 661

Query: 381 -SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            S  E  PS         + L  C  +  LP++L M +SL    +  C KLE+ PD +GN
Sbjct: 662 TSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNLEM-ESLNVFTLDGCSKLEKFPDIVGN 720

Query: 433 LEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           +  L  LR++ TGI ++  S+  L  L  L +  C + ES+PS +   KSL  L++  C 
Sbjct: 721 MNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 780

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSS 551
               +P+++G +E L      GT+IR++P S+  L +L+ L L      ++  SL+ L S
Sbjct: 781 ELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCKRIVVLPSLSGLCS 840

Query: 552 LVSLKLSNNNLER--IPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
           L  L L   NL    +PE +  LSSLK LDL +NN         S P SI   F  L + 
Sbjct: 841 LEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNN-------FVSLPKSINQLF-ELEML 892

Query: 610 VDLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
           V L +C  L+  P   S++       Q+         S+  PGNEI  WF HQS GS+IS
Sbjct: 893 V-LEDCTMLESLPEVPSKV-------QTGLSNPRPGFSIAVPGNEILGWFNHQSEGSSIS 944

Query: 668 LKTPQPTGYNKLMGFAFCVVVACSVSECCRHES 700
           ++ P  +     MGF  CV  + +  +  +H S
Sbjct: 945 VQVPSWS-----MGFVACVAFSANELKEWKHAS 972



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 48/316 (15%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
           SL    C  KS  +L+II+  N     + PD L  +  L  LI++G T++ E+   L   
Sbjct: 616 SLEQLWCGCKSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSEVHPSLAHH 674

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSG 382
             L  + L NC  +  + +++ +++S+    +  CS L+ FP+I           +D +G
Sbjct: 675 KKLQYVNLVNCKSIRILPNNL-EMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETG 733

Query: 383 IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           I ++ SS+        L +N C  LES+PSS+   KSL  L++  C +L+ +P++LG +E
Sbjct: 734 ITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVE 793

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           +L+E    GT IR+                       LP+ +++ K+L  L +  CK  +
Sbjct: 794 SLDEFDASGTSIRQ-----------------------LPASIFILKNLKVLSLDGCKRIV 830

Query: 495 RLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
            LP  +  L  L+VL ++   +RE  +PE +G LSSL+ L LS NN   +P+S+NQL  L
Sbjct: 831 VLPS-LSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFEL 889

Query: 553 VSLKLSN-NNLERIPE 567
             L L +   LE +PE
Sbjct: 890 EMLVLEDCTMLESLPE 905



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 17/224 (7%)

Query: 10  INPYTFSKMTEL-RLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLV 68
           +N +T    ++L +     G+ N+ MV  L+    T+L     H   L  L++   +NL 
Sbjct: 700 LNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLE 759

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTET 127
           S+  P S        +  L SLK++DL     L  +P+ L   ++L+  D    +S+ + 
Sbjct: 760 SI--PSS--------IGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFD-ASGTSIRQL 808

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN--LPKMTSCHLRST 185
            +SI  L  L+VL LD CK +  LP+      L+ L LR C NL+   LP+   C     
Sbjct: 809 PASIFILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRAC-NLREGALPEDIGCLSSLK 867

Query: 186 LPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
              L       LP SI  L  +  L++  C  LE++     K+Q
Sbjct: 868 SLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ 911


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 52/407 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMV-HSLEGVPFTELRYFEWHQFPLKTLNIL-HW 64
           E   NP  F+KM  LRLL      NK  + H L+ +P + L+   W + PL++L I    
Sbjct: 408 EASWNPEAFAKMGNLRLLMIL---NKLQLQHGLKCLP-SGLKVLVWKECPLESLPIGDQS 463

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           + LV L M  SK+  LW   + L +LK I+LK SK L + PD +   NLE LDL  C +L
Sbjct: 464 DELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINL 523

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR- 183
            E H+S+  L K+  + L+ CK+L SLP  +    LKRL+L GC++++ LP         
Sbjct: 524 VEVHASLGLLKKISYVTLEDCKNLKSLPGKLEMNSLKRLILTGCTSVRKLPDFGESMTNL 583

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP---- 239
           STL L  + + ELP +I  L+ +  LL+  CK + ++  +  KL+ L+ + +  C     
Sbjct: 584 STLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSK 643

Query: 240 ---NLQFLEMPSC-NIDGTRSKEQPSSELKLKK------------CPRPES--LPSGQCM 281
              NL   E   C N+  T  +E PSS + LK                 ES  LP G+  
Sbjct: 644 LPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSESSLLPLGRIF 703

Query: 282 ---------------FKSLTSLEIID---CPNF-ERLPDELGNLQALNRLIIDGTAIREL 322
                          F  L+SL+ +D   C  + E +PD+LG L +L  L I G     L
Sbjct: 704 GFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNL 763

Query: 323 PEG-LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
            +G + +L  L +L L +C  L+ + +      +V  +  S+CS+LK
Sbjct: 764 RDGCISKLLKLERLVLSSCQNLQSLPNLP---PNVHFVNTSDCSSLK 807



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 189/449 (42%), Gaps = 66/449 (14%)

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKC-PRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            L+ L    C ++     +Q    + L  C  + + L  G  +  +L ++ + +     +
Sbjct: 443 GLKVLVWKECPLESLPIGDQSDELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQ 502

Query: 299 LPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            PD  G +  L +L ++G   + E+   LG L  +S + L++C  L+ +   + ++ S++
Sbjct: 503 TPDFTG-IPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCKNLKSLPGKL-EMNSLK 560

Query: 358 SIEISNCSNLKGFPEI--PFCNIDGSGIERIPSSVLK-------------LNKCSKLESL 402
            + ++ C++++  P+      N+    ++ IP + L              L  C  + SL
Sbjct: 561 RLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSL 620

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           P +    KSL  L +  C K  +LPD L   EALE L V  T IREVP S+  L      
Sbjct: 621 PDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHL------ 674

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE- 521
                            K+L SL    CK   R  +       L +  I G      P+ 
Sbjct: 675 -----------------KNLISLLFHGCKGLARNSES----SLLPLGRIFGFGTHPTPKK 713

Query: 522 ----SLGQLSSLEWLVLSDNNL--QIIPESLNQLSSLVSLKLSNNNLERIPER-LDPLSS 574
               S   LSSL+ L LS  NL  + IP+ L  LSSLV+L +S NN   + +  +  L  
Sbjct: 714 LILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLK 773

Query: 575 LKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLR-LSVDLRNCLKLDPNELSEIIKDGWM 632
           L+ L L    NL  +P    +      S+ +SL+ LS         DP E+   +   + 
Sbjct: 774 LERLVLSSCQNLQSLPNLPPNVHFVNTSDCSSLKPLS---------DPQEIWGHLA-SFA 823

Query: 633 KQSVNGETYITKSMYFPGNEIPKWFRHQS 661
              +     I   +  PGNEIP  F +Q+
Sbjct: 824 FDKLQDANQIKTLLVGPGNEIPSTFFYQN 852


>gi|167998064|ref|XP_001751738.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696836|gb|EDQ83173.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 164/531 (30%), Positives = 246/531 (46%), Gaps = 32/531 (6%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           ++ NL+SL   D+   K LT LP +L    +L   D+ +C  LT     +  L  L +LD
Sbjct: 2   ELGNLISLITFDIHGCKNLTSLPKELGNLTSLTTFDISWCEKLTSLPKELGNLISLTILD 61

Query: 142 LDRCKSLTSLPTSIHSKYLKRLVLR---GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
           +  C++LTSLP  + +  L  L+L    GC NL +L K    +L S +     G + L S
Sbjct: 62  IKECRNLTSLPKELDN--LTSLILFDIIGCKNLTSLLKELG-NLISLITFDIHGCKNLTS 118

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI---RIHRCPNLQFLEMPSCNIDGTR 255
             K L N+  L I+  K  +N++S   KL  L S+    IHRC NL  L     N+    
Sbjct: 119 LPKELGNLISLTIFDIKECQNLTSLPKKLGNLISLITFDIHRCKNLTSLPKELGNLTSLT 178

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-II 314
           + +    E       +  SLP+      S T   I +C N   L  EL NL +L    I 
Sbjct: 179 TFDISWYE-------KLTSLPNELGNLISFTIFHIKECRNLTSLAKELDNLTSLTIFDIS 231

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           +   +  L + LG L  L   ++  C  L  +   +  LKS+ + +IS C  L   P   
Sbjct: 232 ECKNLTSLLKELGNLISLITFDIHRCKNLTSLRKELGSLKSLTTFDISWCEKLTSLP--- 288

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
             N  G+    I  ++  + +C  L SLP  L    SL   EI +CK L  L  ELGNL 
Sbjct: 289 --NELGN---LISLTIFDIKECRNLTSLPKELDNLTSLIIFEISECKNLTSLQKELGNLI 343

Query: 435 ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           +L    + G   +  + K L+ L +L+   +  C +  SLP  L    SLT+ +I  C+ 
Sbjct: 344 SLITFDIHGCNNLTSLLKELSNLISLTTFDIYGCKNLTSLPKELGNLTSLTTFDISWCEK 403

Query: 493 FMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
              LP E+GNL  L +  IK    +  +P+ L  L+SL    +S+  NL  + + L+ L+
Sbjct: 404 LTSLPKELGNLISLTIYDIKECRNLTSLPKELENLTSLIIFDISECKNLTSLTKELSNLT 463

Query: 551 SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSI 599
           SL +  +S    L  +P+ L  L SL   D+ E  NL  +P+ L +  + I
Sbjct: 464 SLTTFDISWCEKLTSLPKELGNLISLTIFDIKECRNLTSLPKELDNLTSLI 514



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 226/505 (44%), Gaps = 33/505 (6%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           K+T L  ++ NL+SL  +D+K  + LT LP +L    +L + D+  C +LT     +  L
Sbjct: 43  KLTSLPKELGNLISLTILDIKECRNLTSLPKELDNLTSLILFDIIGCKNLTSLLKELGNL 102

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
             L   D+  CK+LTSLP  + +   L    ++ C NL +LPK     L + + L+   I
Sbjct: 103 ISLITFDIHGCKNLTSLPKELGNLISLTIFDIKECQNLTSLPK----KLGNLISLITFDI 158

Query: 194 EE------LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                   LP  +  L+++    I   ++L ++ + +  L       I  C NL  L   
Sbjct: 159 HRCKNLTSLPKELGNLTSLTTFDISWYEKLTSLPNELGNLISFTIFHIKECRNLTSLAKE 218

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+          +   + +C    SL        SL + +I  C N   L  ELG+L+
Sbjct: 219 LDNLTSL-------TIFDISECKNLTSLLKELGNLISLITFDIHRCKNLTSLRKELGSLK 271

Query: 308 ALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +L    I     +  LP  LG L  L+  ++K C  L  +   +  L S+   EIS C N
Sbjct: 272 SLTTFDISWCEKLTSLPNELGNLISLTIFDIKECRNLTSLPKELDNLTSLIIFEISECKN 331

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L    +       G+ I  I      ++ C+ L SL   L    SLT+ +I  CK L  L
Sbjct: 332 LTSLQKEL-----GNLISLI---TFDIHGCNNLTSLLKELSNLISLTTFDIYGCKNLTSL 383

Query: 427 PDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           P ELGNL +L    +     +  +PK L  L +L+   +K+C +  SLP  L    SL  
Sbjct: 384 PKELGNLTSLTTFDISWCEKLTSLPKELGNLISLTIYDIKECRNLTSLPKELENLTSLII 443

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQII 542
            +I +CKN   L  E+ NL  L    I     +  +P+ LG L SL    + +  NL  +
Sbjct: 444 FDISECKNLTSLTKELSNLTSLTTFDISWCEKLTSLPKELGNLISLTIFDIKECRNLTSL 503

Query: 543 PESLNQLSSLVSLKLSN-NNLERIP 566
           P+ L+ L+SL+   +S   NL  +P
Sbjct: 504 PKELDNLTSLIIFDISEYENLTSLP 528



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 209/470 (44%), Gaps = 50/470 (10%)

Query: 65  ENLVSL---KMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLG 119
           +NL SL    + G K +T L  ++ NL+SL   D+   K LT LP +L    +L I D+ 
Sbjct: 76  DNLTSLILFDIIGCKNLTSLLKELGNLISLITFDIHGCKNLTSLPKELGNLISLTIFDIK 135

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP---------TSIHSKYLKRLVLRGCSN 170
            C +LT     +  L  L   D+ RCK+LTSLP         T+    + ++L     + 
Sbjct: 136 ECQNLTSLPKKLGNLISLITFDIHRCKNLTSLPKELGNLTSLTTFDISWYEKLTSLP-NE 194

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS---CKRLENISSSIFKL 227
           L NL   T  H++            L S  K L N+  L I+    CK L ++   +  L
Sbjct: 195 LGNLISFTIFHIKEC--------RNLTSLAKELDNLTSLTIFDISECKNLTSLLKELGNL 246

Query: 228 QFLESIRIHRCPNLQFL--EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
             L +  IHRC NL  L  E+ S          +  +   +  C +  SLP+      SL
Sbjct: 247 ISLITFDIHRCKNLTSLRKELGSL---------KSLTTFDISWCEKLTSLPNELGNLISL 297

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           T  +I +C N   LP EL NL +L    I +   +  L + LG L  L   ++  C+ L 
Sbjct: 298 TIFDIKECRNLTSLPKELDNLTSLIIFEISECKNLTSLQKELGNLISLITFDIHGCNNLT 357

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLP 403
            +   +  L S+ + +I  C NL   P+          +  + S +   ++ C KL SLP
Sbjct: 358 SLLKELSNLISLTTFDIYGCKNLTSLPK---------ELGNLTSLTTFDISWCEKLTSLP 408

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKL 461
             L    SLT  +I +C+ L  LP EL NL +L    + E   +  + K L+ L +L+  
Sbjct: 409 KELGNLISLTIYDIKECRNLTSLPKELENLTSLIIFDISECKNLTSLTKELSNLTSLTTF 468

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            +  C    SLP  L    SLT  +I +C+N   LP E+ NL  L +  I
Sbjct: 469 DISWCEKLTSLPKELGNLISLTIFDIKECRNLTSLPKELDNLTSLIIFDI 518


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 146/438 (33%), Positives = 215/438 (49%), Gaps = 38/438 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EWH +P K+L   L  +
Sbjct: 389 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPEDLS-KELRFLEWHSYPSKSLPAGLQVD 444

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L+K PDL+   NL  L L  C+SL+
Sbjct: 445 GLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLS 504

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+     L+ ++L  CKS   LP+++  + LK   L GC+ L+  P +  + +   
Sbjct: 505 EVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLM 564

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G GI EL SSI  L  +  L + +CK LE+I SSI  L+ L+ + +  C  L+  
Sbjct: 565 ELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK-- 622

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC------PNFER 298
                NI     K +   E  +      +  P+   + KSL  L    C      P  +R
Sbjct: 623 -----NIPENLGKVESLEEFDVSGTSIRQP-PASIFLLKSLKVLSFDGCKRIAVNPTDQR 676

Query: 299 LPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           LP  L  L +L  L +    +RE  LPE +G L+ L  L+L   +    +  SI KL  +
Sbjct: 677 LP-SLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSR-NNFVSLPRSINKLFGL 734

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           E++ + +C  L+  PE+P      S ++      L LN C +L+ +P  + +  S  S  
Sbjct: 735 ETLVLEDCRMLESLPEVP------SKVQ-----TLNLNGCIRLKEIPDPIKLSSSKRSEF 783

Query: 417 I-IDCKKL--ERLPDELG 431
           I IDC++L   +  D LG
Sbjct: 784 ICIDCRELYEHKGQDSLG 801



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 165/317 (52%), Gaps = 34/317 (10%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L++I+  N     + PD L  +  L+ LI++G T++ E+   LG+   L  + L 
Sbjct: 464 KSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLV 522

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIERIPSS- 389
           NC     + S++ +++S++   +  C+ L+ FP+I          C +DG+GI  + SS 
Sbjct: 523 NCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVGNMNCLMELC-LDGTGIAELSSSI 580

Query: 390 -------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                  VL +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE  V 
Sbjct: 581 HHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDVS 640

Query: 443 GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS--RLYVSKSLTSLEIID-CKNFMR--- 495
           GT IR+ P S+  L +L  L    C      P+  RL     L SLE++D C   +R   
Sbjct: 641 GTSIRQPPASIFLLKSLKVLSFDGCKRIAVNPTDQRLPSLSGLCSLEVLDLCACNLREGA 700

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP++IG L  LK L +       +P S+ +L  LE LVL D  +    ESL ++ S V  
Sbjct: 701 LPEDIGCLSSLKSLDLSRNNFVSLPRSINKLFGLETLVLEDCRML---ESLPEVPSKVQ- 756

Query: 556 KLSNNNLERIPERLDPL 572
            L+ N   R+ E  DP+
Sbjct: 757 TLNLNGCIRLKEIPDPI 773



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 166/356 (46%), Gaps = 65/356 (18%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N S  +L Y   S   LK +    S+ +S   +L G P + 
Sbjct: 435 KSLPAGL-QVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLS 493

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C     LPS+L M +SL    +  C KLE+
Sbjct: 494 SLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEM-ESLKVFTLDGCTKLEK 552

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L EL ++GTGI E+  S+  L  L  L +  C + ES+PS +   KSL  
Sbjct: 553 FPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKK 612

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES---------------------- 522
           L++  C     +P+ +G +E L+   + GT+IR+ P S                      
Sbjct: 613 LDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCKRIAVNP 672

Query: 523 -------LGQLSSLEWLVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
                  L  L SLE L L   NL+   +PE +  LSSL SL LS NN   +P  ++ L 
Sbjct: 673 TDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNFVSLPRSINKLF 732

Query: 574 SLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL----DPNELS 624
            L+ L L +   L+ +PE        +PS+  +L    +L  C++L    DP +LS
Sbjct: 733 GLETLVLEDCRMLESLPE--------VPSKVQTL----NLNGCIRLKEIPDPIKLS 776


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 28/359 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EWH +P K+L + L  +
Sbjct: 575 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPEDLS-NELRFIEWHSYPSKSLPSGLQVD 630

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  LTK PDL+   NLE L L  C+SL+
Sbjct: 631 ELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLS 690

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  KL+ ++L  CKS+  LP ++  + L    L GCS L+  P +  + +   
Sbjct: 691 EVHPSLAHHKKLQYVNLVNCKSIRILPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELM 750

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+++
Sbjct: 751 VLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYI 810

Query: 245 --------EMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLP--SGQCMFKSLT 286
                    +   +  GT  ++ P+S         L L  C R   LP  SG C   SL 
Sbjct: 811 PEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCKRIVVLPSLSGLC---SLE 867

Query: 287 SLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            L +  C   E  LP+++G L +L  L +       LP+ + QL  L  L L++C+ LE
Sbjct: 868 VLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLE 926



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 178/366 (48%), Gaps = 39/366 (10%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
           SL    C  KS  +L+II+  N     + PD L  +  L  LI++G T++ E+   L   
Sbjct: 641 SLEQLWCGCKSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSEVHPSLAHH 699

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSG 382
             L  + L NC  +  + +++ +++S+    +  CS L+ FP+I           +D +G
Sbjct: 700 KKLQYVNLVNCKSIRILPNNL-EMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETG 758

Query: 383 IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           I ++ SS+        L +N C  LES+PSS+   KSL  L++  C +L+ +P++LG +E
Sbjct: 759 ITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVE 818

Query: 435 ALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK-- 491
           +L+E    GT IR++P S+  L  L  L L  C     LPS       L SLE++  +  
Sbjct: 819 SLDEFDASGTSIRQLPASIFILKNLKVLSLDGCKRIVVLPSL----SGLCSLEVLGLRAC 874

Query: 492 NFMR--LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
           N     LP++IG L  LK L +       +P+S+ QL  LE LVL D  +    ESL ++
Sbjct: 875 NLREGALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTML---ESLPEV 931

Query: 550 SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
            S V   LSN      P     +   + L  F  N  ++ E+  +  ++I   F S    
Sbjct: 932 PSKVQTGLSNPR----PGFSIAVPGNEILGWF--NHQKLKEWKHASFSNIELSFHSYEPG 985

Query: 610 VDLRNC 615
           V ++NC
Sbjct: 986 VKVKNC 991



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 188/413 (45%), Gaps = 59/413 (14%)

Query: 290 IIDCPNFERLPDELGNLQALNRL---IIDGTAIRELPEGLGQ------------LALLSK 334
            +D P  +     +     ++RL    ID   + E PE L               +L S 
Sbjct: 567 FLDMPGIKEAQWNMKAFSKMSRLRLLKIDNVQLSEGPEDLSNELRFIEWHSYPSKSLPSG 626

Query: 335 LELKNCSELEYISSSIFKL----KSVESIEISNCSN---------LKGFPEIPFCNIDG- 380
           L++    EL   +SS+ +L    KS  +++I N SN         L G P +    ++G 
Sbjct: 627 LQVDELVELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGC 686

Query: 381 -SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            S  E  PS         + L  C  +  LP++L M +SL    +  C KLE+ PD +GN
Sbjct: 687 TSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNLEM-ESLNVFTLDGCSKLEKFPDIVGN 745

Query: 433 LEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           +  L  LR++ TGI ++  S+  L  L  L +  C + ES+PS +   KSL  L++  C 
Sbjct: 746 MNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS 805

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSS 551
               +P+++G +E L      GT+IR++P S+  L +L+ L L      ++  SL+ L S
Sbjct: 806 ELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCKRIVVLPSLSGLCS 865

Query: 552 LVSLKLSNNNLER--IPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
           L  L L   NL    +PE +  LSSLK LDL +NN         S P SI   F  L + 
Sbjct: 866 LEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNF-------VSLPKSINQLF-ELEML 917

Query: 610 VDLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
           V L +C  L+  P   S++       Q+         S+  PGNEI  WF HQ
Sbjct: 918 V-LEDCTMLESLPEVPSKV-------QTGLSNPRPGFSIAVPGNEILGWFNHQ 962



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 17/224 (7%)

Query: 10  INPYTFSKMTEL-RLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLV 68
           +N +T    ++L +     G+ N+ MV  L+    T+L     H   L  L++   +NL 
Sbjct: 725 LNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLE 784

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTET 127
           S+  P S        +  L SLK++DL     L  +P+ L   ++L+  D    +S+ + 
Sbjct: 785 SI--PSS--------IGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFD-ASGTSIRQL 833

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN--LPKMTSCHLRST 185
            +SI  L  L+VL LD CK +  LP+      L+ L LR C NL+   LP+   C     
Sbjct: 834 PASIFILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRAC-NLREGALPEDIGCLSSLK 892

Query: 186 LPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
              L       LP SI  L  +  L++  C  LE++     K+Q
Sbjct: 893 SLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ 936


>gi|297791725|ref|XP_002863747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309582|gb|EFH40006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 156/281 (55%), Gaps = 17/281 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNK----CMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
           E+ I+   F +M  L+ L+    +NK     +    + +P  +LR   W  +PL+++ + 
Sbjct: 551 ELHIHESAFKEMRNLQFLRISTKENKEVRLNLPEDFDYLP-PKLRLLSWRGYPLRSMPST 609

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ++LV L+M  S    LWD VQ L +LK++DL  SK L ++PDLS+A NLE L+LG C
Sbjct: 610 FCPQSLVKLEMRYSYFEMLWDGVQPLTTLKKMDLWGSKNLKEIPDLSMATNLETLNLGAC 669

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           SSL E HSS+QYLNKL+ L+L  C++L +LPT+ + + L  L L GCS++K+ P +++  
Sbjct: 670 SSLVELHSSVQYLNKLKRLNLSYCENLETLPTNFNLQALDCLNLFGCSSIKSFPDISTN- 728

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
             S L L    IEE+P  I+  + +  + +++C +LE ++ +I KL+ L  +    C  L
Sbjct: 729 -ISYLNLSQTRIEEVPWWIENFTELRTIYMWNCDKLEYVTLNISKLKHLAIVDFSDCGAL 787

Query: 242 QFLEMPSCNI-----DGTRSK----EQPSSELKLKKCPRPE 273
           +   +    I     D   SK     + SS L     PR E
Sbjct: 788 KVASLNDSPITVEMADNIHSKLPFYVEVSSSLPYDHFPRVE 828



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 46/319 (14%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLA 457
           L S+PS+ C  +SL  LE+      E L D +  L  L+++ + G+  ++E+P       
Sbjct: 603 LRSMPSTFCP-QSLVKLEM-RYSYFEMLWDGVQPLTTLKKMDLWGSKNLKEIPDLSMATN 660

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           L  L L  CSS   L S +     L  L +  C+N   LP    NL+ L  L + G ++I
Sbjct: 661 LETLNLGACSSLVELHSSVQYLNKLKRLNLSYCENLETLPTNF-NLQALDCLNLFGCSSI 719

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
           +  P+    +S   +L LS   ++ +P  +   + L ++ + N + LE +   +  L  L
Sbjct: 720 KSFPDISTNIS---YLNLSQTRIEEVPWWIENFTELRTIYMWNCDKLEYVTLNISKLKHL 776

Query: 576 KYLD--------------------LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
             +D                    + +N   ++P Y+    +S+P +    R+ +D  NC
Sbjct: 777 AIVDFSDCGALKVASLNDSPITVEMADNIHSKLPFYVE-VSSSLPYDHFP-RVELDFLNC 834

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGN-EIPKWFRHQSTGSTIS-LKTPQP 673
            KLD   L +       +QSV       K +  P + E+P +F H++TG++++ +   Q 
Sbjct: 835 FKLDQEALLQ-------QQSV------FKRLILPADQEVPSYFTHRTTGTSMTNIPLLQT 881

Query: 674 TGYNKLMGFAFCVVVACSV 692
           +       F  C VV   +
Sbjct: 882 SLSQPFFRFLACAVVDSEI 900



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 4/105 (3%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L  C   E+LP+   + ++L  L +  C + +  PD   N+  LN   +  T I E+P
Sbjct: 688 LNLSYCENLETLPTNFNL-QALDCLNLFGCSSIKSFPDISTNISYLN---LSQTRIEEVP 743

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
             +     L  + + NC +LEY++ +I KLK +  ++ S+C  LK
Sbjct: 744 WWIENFTELRTIYMWNCDKLEYVTLNISKLKHLAIVDFSDCGALK 788



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 22/223 (9%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALL 332
           S+PS  C  +SL  LE+     FE L D +  L  L ++ + G+  ++E+P+ L     L
Sbjct: 605 SMPSTFCP-QSLVKLEM-RYSYFEMLWDGVQPLTTLKKMDLWGSKNLKEIPD-LSMATNL 661

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP------EIPFCNIDG-SGIER 385
             L L  CS L  + SS+  L  ++ + +S C NL+  P       +   N+ G S I+ 
Sbjct: 662 ETLNLGACSSLVELHSSVQYLNKLKRLNLSYCENLETLPTNFNLQALDCLNLFGCSSIKS 721

Query: 386 IPS-----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
            P      S L L++ +++E +P  +  F  L ++ + +C KLE +   +  L+ L  + 
Sbjct: 722 FPDISTNISYLNLSQ-TRIEEVPWWIENFTELRTIYMWNCDKLEYVTLNISKLKHLAIVD 780

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFES-LPSRLYVSKSL 482
               G  +V    A L  S + ++   +  S LP  + VS SL
Sbjct: 781 FSDCGALKV----ASLNDSPITVEMADNIHSKLPFYVEVSSSL 819


>gi|227438193|gb|ACP30586.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1001

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 202/420 (48%), Gaps = 64/420 (15%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKT 58
           M KI+ E+ ++   F  M+ LR LKF     +  +   E   +  ++LR   W ++P++ 
Sbjct: 537 MDKIHDELHVHENAFKGMSNLRFLKFYTFGKEARLRLNESFDYLPSKLRLLCWDKYPMRC 596

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +    +NLV L+M  S +  LW+ V  L  LK++DL  SK L ++PDLS A +LE LD
Sbjct: 597 LPSKFCPQNLVILEMKNSNLENLWEGVSPLGHLKKMDLWGSKNLKEIPDLSKATSLEKLD 656

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L  CSSL E  SSI  LNKL  L++  C +L +LPT ++ + L RL L+GC+ L+  P +
Sbjct: 657 LKGCSSLVELPSSISKLNKLTELNMPACTNLETLPTGMNLESLNRLNLKGCTRLRIFPNI 716

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           +     S L L    I E PS++                LEN+  ++F ++ ++S ++  
Sbjct: 717 SRN--ISELILDETSITEFPSNL---------------YLENL--NLFSMEGIKSEKLWE 757

Query: 238 -----CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
                 P +  L  PS  I            L L   P    LPS      +LT+L I  
Sbjct: 758 RAQPLTPLMTMLS-PSLRI------------LSLSDIPSLVELPSSFHNLHNLTNLSITR 804

Query: 293 CPNFERLPDELGNLQALNRLIIDG---------------------TAIRELPEGLGQLAL 331
           C N E LP  + NL +L RLI+ G                     T I E+P  +   + 
Sbjct: 805 CKNLEILPTRI-NLPSLIRLILSGCSRLRSFPDISRNVLDLNLIQTGIEEIPLWVEDFSR 863

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L  L +++C +L+Y+  SI  L+ +E ++ SNC  L G   I + + +    + I + VL
Sbjct: 864 LKYLFMESCPKLKYV--SISTLRHLEMVDFSNCGALTGAGIIGYQSGEAMRPDDIETEVL 921



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 185/447 (41%), Gaps = 105/447 (23%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLS 333
           LPS  C  ++L  LE+ +  N E L + +  L  L ++ + G+  ++E+P+ L +   L 
Sbjct: 597 LPSKFCP-QNLVILEMKNS-NLENLWEGVSPLGHLKKMDLWGSKNLKEIPD-LSKATSLE 653

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           KL+LK CS L  + SSI KL  +  + +  C+NL+  P        G  +E +  + L L
Sbjct: 654 KLDLKGCSSLVELPSSISKLNKLTELNMPACTNLETLPT-------GMNLESL--NRLNL 704

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG----NLEALEELRVEGTGIREV 449
             C++L   P+   + ++++ L I+D   +   P  L     NL ++E ++ E    R  
Sbjct: 705 KGCTRLRIFPN---ISRNISEL-ILDETSITEFPSNLYLENLNLFSMEGIKSEKLWERAQ 760

Query: 450 P----KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           P     ++   +L  L L    S   LPS  +   +LT+L I  CKN   LP  I NL  
Sbjct: 761 PLTPLMTMLSPSLRILSLSDIPSLVELPSSFHNLHNLTNLSITRCKNLEILPTRI-NLPS 819

Query: 506 LKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
           L  L + G + +R  P+            +S N              ++ L L    +E 
Sbjct: 820 LIRLILSGCSRLRSFPD------------ISRN--------------VLDLNLIQTGIEE 853

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL--SVDLRNCLKLD--- 619
           IP  ++  S LKYL            ++ S P       ++LR    VD  NC  L    
Sbjct: 854 IPLWVEDFSRLKYL------------FMESCPKLKYVSISTLRHLEMVDFSNCGALTGAG 901

Query: 620 ---------------------PNELSEIIKDGWMKQ---------SVNGETYITKSMYFP 649
                                P E S  ++D ++ +          +N E  + +   F 
Sbjct: 902 IIGYQSGEAMRPDDIETEVLVPEEASSSLQDNFVPRVKFRLINCFDLNLEALLQQQSVFE 961

Query: 650 G-----NEIPKWFRHQSTGSTISLKTP 671
                  E+P +F H++TG++ SL  P
Sbjct: 962 QLILSCEEVPSYFTHKATGASTSLTVP 988


>gi|168043922|ref|XP_001774432.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674284|gb|EDQ60795.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 394

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 190/374 (50%), Gaps = 26/374 (6%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIR 320
           + L L  C +  SLP       SLTSL +        LP+ELGNL +L  L I G + + 
Sbjct: 28  TSLNLVNCWKLTSLPKELVNLTSLTSLNLSGFWEVTLLPNELGNLTSLTSLEISGCSKLT 87

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG 380
            LP  LG L  L+ L L   S L  + + +  L S+ S+ +  CSNL   P       + 
Sbjct: 88  SLPNKLGNLTSLTSLNLSGNSSLTSLPNEMGNLTSLTSLNLKRCSNLTSLPN------EL 141

Query: 381 SGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
             +  + S  LKL++CS L+SLP  L    SL SL +  C KL  LP+ELGNL +L  L 
Sbjct: 142 GNLASLTS--LKLSRCSSLKSLPIELSNLTSLPSLSLSGCWKLTSLPNELGNLTSLTSLN 199

Query: 441 VEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           + G + +  +P  L  L +L+ LKL++CS+  SLP+      SLTSL +   KN   LP 
Sbjct: 200 LSGCSNLTSLPNELGNLTSLTSLKLRRCSNLTSLPNEFGNLASLTSLNLDGWKNLTSLPK 259

Query: 499 EIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK 556
            + NL  L  L + + +++  +P  LG L+SL  L LS    L+ +P  L  L+SL SL 
Sbjct: 260 VLVNLTSLTSLNLSRCSSLTSLPNELGNLASLTSLNLSGCWRLRSLPNELGNLTSLTSLH 319

Query: 557 LSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRN 614
           +S    L  +P  L  L+SL  L+L E +NL  +P  L           TSL +S+DL  
Sbjct: 320 ISKCWELTSLPNELGNLTSLILLNLSECSNLTSLPNEL--------CNLTSL-ISLDLSG 370

Query: 615 CLKLD--PNELSEI 626
           C  L   PNEL  I
Sbjct: 371 CSNLTSMPNELHNI 384



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 189/411 (45%), Gaps = 31/411 (7%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGC--- 168
           L  L +  C  L    + +  L  L  L+L  C  LTSLP   ++   L  L L G    
Sbjct: 3   LTSLHISQCHELRSLPNELGNLVSLTSLNLVNCWKLTSLPKELVNLTSLTSLNLSGFWEV 62

Query: 169 ----SNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
               + L NL  +TS  +          +  LP+ +  L+++  L +     L ++ + +
Sbjct: 63  TLLPNELGNLTSLTSLEISGC-----SKLTSLPNKLGNLTSLTSLNLSGNSSLTSLPNEM 117

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
             L  L S+ + RC NL  L     N+    S       LKL +C   +SLP       S
Sbjct: 118 GNLTSLTSLNLKRCSNLTSLPNELGNLASLTS-------LKLSRCSSLKSLPIELSNLTS 170

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSEL 343
           L SL +  C     LP+ELGNL +L  L + G + +  LP  LG L  L+ L+L+ CS L
Sbjct: 171 LPSLSLSGCWKLTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNLTSLTSLKLRRCSNL 230

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             + +    L S+ S+ +    NL   P++         +     + L L++CS L SLP
Sbjct: 231 TSLPNEFGNLASLTSLNLDGWKNLTSLPKVL--------VNLTSLTSLNLSRCSSLTSLP 282

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQL-ALSKL 461
           + L    SLTSL +  C +L  LP+ELGNL +L  L +     +  +P  L  L +L  L
Sbjct: 283 NELGNLASLTSLNLSGCWRLRSLPNELGNLTSLTSLHISKCWELTSLPNELGNLTSLILL 342

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
            L +CS+  SLP+ L    SL SL++  C N   +P+E+ N+  L  L I 
Sbjct: 343 NLSECSNLTSLPNELCNLTSLISLDLSGCSNLTSMPNELHNITSLTSLNIN 393



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 177/380 (46%), Gaps = 41/380 (10%)

Query: 67  LVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L SL + G  +VT L +++ NL SL  +++     LT LP+ L    +L  L+L   SSL
Sbjct: 51  LTSLNLSGFWEVTLLPNELGNLTSLTSLEISGCSKLTSLPNKLGNLTSLTSLNLSGNSSL 110

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
           T   + +  L  L  L+L RC +LTSLP  + +   L  L L  CS+LK+LP        
Sbjct: 111 TSLPNEMGNLTSLTSLNLKRCSNLTSLPNELGNLASLTSLKLSRCSSLKSLP-------- 162

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
                    IE    +         L +  C +L ++ + +  L  L S+ +  C NL  
Sbjct: 163 ---------IELSNLTSL-----PSLSLSGCWKLTSLPNELGNLTSLTSLNLSGCSNLTS 208

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           L     N+    S       LKL++C    SLP+      SLTSL +    N   LP  L
Sbjct: 209 LPNELGNLTSLTS-------LKLRRCSNLTSLPNEFGNLASLTSLNLDGWKNLTSLPKVL 261

Query: 304 GNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            NL +L  L +   +++  LP  LG LA L+ L L  C  L  + + +  L S+ S+ IS
Sbjct: 262 VNLTSLTSLNLSRCSSLTSLPNELGNLASLTSLNLSGCWRLRSLPNELGNLTSLTSLHIS 321

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
            C  L   P     N  G+    I   +L L++CS L SLP+ LC   SL SL++  C  
Sbjct: 322 KCWELTSLP-----NELGNLTSLI---LLNLSECSNLTSLPNELCNLTSLISLDLSGCSN 373

Query: 423 LERLPDELGNLEALEELRVE 442
           L  +P+EL N+ +L  L + 
Sbjct: 374 LTSMPNELHNITSLTSLNIN 393



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 121/260 (46%), Gaps = 47/260 (18%)

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELR-VEGTGIREVPKSLAQL-ALSKLKLKKCS 467
            SLTSL I  C +L  LP+ELGNL +L  L  V    +  +PK L  L +L+ L L    
Sbjct: 1   TSLTSLHISQCHELRSLPNELGNLVSLTSLNLVNCWKLTSLPKELVNLTSLTSLNLSGFW 60

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQL 526
               LP+ L    SLTSLEI  C     LP+++GNL  L  L + G +++  +P  +G L
Sbjct: 61  EVTLLPNELGNLTSLTSLEISGCSKLTSLPNKLGNLTSLTSLNLSGNSSLTSLPNEMGNL 120

Query: 527 SSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNN------------------------ 561
           +SL  L L   +NL  +P  L  L+SL SLKLS  +                        
Sbjct: 121 TSLTSLNLKRCSNLTSLPNELGNLASLTSLKLSRCSSLKSLPIELSNLTSLPSLSLSGCW 180

Query: 562 -LERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
            L  +P  L  L+SL  L+L   +NL  +P  L +      +  TSL+    LR C  L 
Sbjct: 181 KLTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNL-----TSLTSLK----LRRCSNLT 231

Query: 620 --PNE------LSEIIKDGW 631
             PNE      L+ +  DGW
Sbjct: 232 SLPNEFGNLASLTSLNLDGW 251


>gi|356558276|ref|XP_003547433.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1106

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 188/375 (50%), Gaps = 49/375 (13%)

Query: 13  YTFSKMTELRLLKFCGSKN---KCM-VHSL--EGVPF--TELRYFEWHQFPLKTL-NILH 63
           + F+KM  L+ L+  G       C   H +  EG+ F  TEL++  W+ +PLK L     
Sbjct: 546 HIFAKMRRLQFLETSGEYRYNFDCFDQHDILAEGLQFLATELKFLCWYYYPLKLLPENFS 605

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            E LV L MPG ++ +LW  V+NLV+LK++DL +S++L +LPDLS A+NLE+L LG CS 
Sbjct: 606 PEKLVILNMPGGRIEKLWHGVKNLVNLKQLDLGWSQMLKELPDLSKARNLEVLLLGGCSM 665

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL------------ 171
           L+  H SI  L KLE LDL  C+SLT L +  H   L  L L  C NL            
Sbjct: 666 LSSVHPSIFSLPKLEKLDLWNCRSLTRLASDCHLCSLCYLNLDYCKNLTEFSLISENMKE 725

Query: 172 --------KNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
                   K LP    C  +  +L L G  IE LP+SI  L+ +  L +  C++L+ I+ 
Sbjct: 726 LGLRFTKVKALPSTFGCQSKLKSLHLKGSAIERLPASINNLTQLLHLEVSRCRKLQTIAE 785

Query: 223 SIFKLQFLESIRIHRCPNLQFL-EMP----SCNIDGTRS----KEQPSS--ELKLKKCPR 271
                 FLE++ ++ C +L+ L E+P    + N+   +S     E P S   L +K+C  
Sbjct: 786 LPM---FLETLDVYFCTSLRTLQELPPFLKTLNVKDCKSLQTLAELPLSLKTLNVKECKS 842

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA-----LNRLIIDGTAIRELPEGL 326
            ++LP    + ++L   +         LP  +  L A     L  ++   TA+ +L E  
Sbjct: 843 LQTLPKLPPLLETLYVRKCTSLQTLPELPCFVKTLYAIYCTSLKTVLFPSTAVEQLKENR 902

Query: 327 GQLALLSKLELKNCS 341
            ++  L+ L+L   S
Sbjct: 903 TRVLFLNCLKLDEHS 917



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 183/436 (41%), Gaps = 74/436 (16%)

Query: 288  LEIIDCPN--FERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELE 344
            L I++ P    E+L   + NL  L +L +  +  ++ELP+ L +   L  L L  CS L 
Sbjct: 609  LVILNMPGGRIEKLWHGVKNLVNLKQLDLGWSQMLKELPD-LSKARNLEVLLLGGCSMLS 667

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFP-EIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +  SIF L  +E +++ NC +L     +   C++            L L+ C  L    
Sbjct: 668  SVHPSIFSLPKLEKLDLWNCRSLTRLASDCHLCSL----------CYLNLDYCKNLTEFS 717

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
                  K L     +   K++ LP   G    L+ L ++G+ I  +P S+  L  L  L+
Sbjct: 718  LISENMKELG----LRFTKVKALPSTFGCQSKLKSLHLKGSAIERLPASINNLTQLLHLE 773

Query: 463  LKKCSSFESLPSRLYVSKSLTSLEIIDC---KNFMRLPDEIGNLEYLKVLTIKG----TA 515
            + +C   +++     +   L +L++  C   +    LP       +LK L +K       
Sbjct: 774  VSRCRKLQTIAE---LPMFLETLDVYFCTSLRTLQELP------PFLKTLNVKDCKSLQT 824

Query: 516  IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
            + E+P SL  L+  E       +LQ +P+    L +L   K +  +L+ +PE   P    
Sbjct: 825  LAELPLSLKTLNVKEC-----KSLQTLPKLPPLLETLYVRKCT--SLQTLPEL--PCFVK 875

Query: 576  KYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI---IKDGWM 632
                ++  +L  +      FP++   +    R  V   NCLKLD + L  I    +   M
Sbjct: 876  TLYAIYCTSLKTV-----LFPSTAVEQLKENRTRVLFLNCLKLDEHSLEAIGLTAQINVM 930

Query: 633  K--------------QSVNGETY-----ITKSMY-FPGNEIPKWFRHQSTGSTISLKTPQ 672
            K              ++ N   Y       +++Y +PG+ +P+W  +++T   I++    
Sbjct: 931  KFANQHLSTPNHDHVENYNDYDYGDNHHSYQAVYLYPGSSVPEWMEYKTTKDYINIDL-S 989

Query: 673  PTGYNKLMGFAFCVVV 688
               Y+ L+ F FC V+
Sbjct: 990  SAPYSPLLSFIFCFVL 1005


>gi|297809025|ref|XP_002872396.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318233|gb|EFH48655.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 918

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 195/391 (49%), Gaps = 43/391 (10%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGS------KNKCMV-HSLEGVPFTELRYFEWHQFPLKT 58
            E+ ++   F  M  LR LK   +      ++K ++      +P T LR   W +FP++ 
Sbjct: 540 DELHLHVDAFKGMRNLRFLKLYTNTKISEKEDKLLLPKEFNYLPNT-LRLLSWQRFPMRC 598

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           + +    + LV L M GSK+ +LW+ V  L  LK I+L  S+ L + PDLSLA +LE L 
Sbjct: 599 MPSEFFPKYLVKLIMTGSKLEKLWEGVMPLQCLKTINLFGSQNLKEFPDLSLATSLETLS 658

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           LGYC SL E  S+I  LNKL  L++  C +L +LP  I+ K L  L+L GCS LK  P +
Sbjct: 659 LGYCLSLVEVPSTIGNLNKLTYLNMLGCHNLETLPADINLKSLSHLILNGCSRLKIFPAL 718

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           ++     TL LL V  E+ PS++  L N+  L+I     ++ +   +  L  L+++ +  
Sbjct: 719 STNISELTLNLLAV--EKFPSNLH-LENLVYLIIQGMTSVK-LWDGVKVLTSLKTMDLRD 774

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
             NL+  E+P  ++            L L++C     LPS      +L  L++  C N E
Sbjct: 775 SKNLK--EIPDLSMASNLLI------LNLRECLSLVELPSTIRNLHNLAELDMSGCTNLE 826

Query: 298 RLPDELGNLQALNR---------------------LIIDGTAIRELPEGLGQLALLSKLE 336
             P+++ NLQ+L R                     L +  TAI E+P  +   + L  L 
Sbjct: 827 TFPNDV-NLQSLKRINLARCSRLKIFPDISTNISELDLSQTAIEEVPWWIENFSKLEYLL 885

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           +  C  LE++  +I KLK ++S++ S+C  L
Sbjct: 886 MGKCDMLEHVFLNISKLKHLKSVDFSDCGRL 916



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 47/314 (14%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           E L  G    + L ++ +    N +  PD L    +L  L +    ++ E+P  +G L  
Sbjct: 619 EKLWEGVMPLQCLKTINLFGSQNLKEFPD-LSLATSLETLSLGYCLSLVEVPSTIGNLNK 677

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIP 387
           L+ L +  C  LE + + I  LKS+  + ++ CS LK FP     I    ++   +E+ P
Sbjct: 678 LTYLNMLGCHNLETLPADI-NLKSLSHLILNGCSRLKIFPALSTNISELTLNLLAVEKFP 736

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
           S++        LE+L     + + +TS+++ D  K+      L +L+ ++ LR +   ++
Sbjct: 737 SNL-------HLENL--VYLIIQGMTSVKLWDGVKV------LTSLKTMD-LR-DSKNLK 779

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           E+P       L  L L++C S   LPS +    +L  L++  C N    P+++ NL+ LK
Sbjct: 780 EIPDLSMASNLLILNLRECLSLVELPSTIRNLHNLAELDMSGCTNLETFPNDV-NLQSLK 838

Query: 508 V---------------------LTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPES 545
                                 L +  TAI EVP  +   S LE+L++   + L+ +  +
Sbjct: 839 RINLARCSRLKIFPDISTNISELDLSQTAIEEVPWWIENFSKLEYLLMGKCDMLEHVFLN 898

Query: 546 LNQLSSLVSLKLSN 559
           +++L  L S+  S+
Sbjct: 899 ISKLKHLKSVDFSD 912



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 38/278 (13%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S+LE +   +  L+ +++I +    NLK FP++       + +E      L L  C  L 
Sbjct: 616 SKLEKLWEGVMPLQCLKTINLFGSQNLKEFPDLSL----ATSLE-----TLSLGYCLSLV 666

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK---SLAQL 456
            +PS++     LT L ++ C  LE LP ++ NL++L  L + G + ++  P    ++++L
Sbjct: 667 EVPSTIGNLNKLTYLNMLGCHNLETLPADI-NLKSLSHLILNGCSRLKIFPALSTNISEL 725

Query: 457 ALSKLKLKKCSSFESLPSRLY----------------VSKSLTSLEIIDCKNFMRLPDEI 500
            L+ L ++K  S   L + +Y                V  SL ++++ D KN   +PD +
Sbjct: 726 TLNLLAVEKFPSNLHLENLVYLIIQGMTSVKLWDGVKVLTSLKTMDLRDSKNLKEIPD-L 784

Query: 501 GNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
                L +L ++   ++ E+P ++  L +L  L +S   NL+  P  +N L SL  + L+
Sbjct: 785 SMASNLLILNLRECLSLVELPSTIRNLHNLAELDMSGCTNLETFPNDVN-LQSLKRINLA 843

Query: 559 N-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
             + L+  P   D  +++  LDL +  ++ +P ++ +F
Sbjct: 844 RCSRLKIFP---DISTNISELDLSQTAIEEVPWWIENF 878


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 201/390 (51%), Gaps = 31/390 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           + Q N   FSKM++LRLLK     N  +    E +   +LR+ EW+ +P K+L   L  +
Sbjct: 390 DAQWNMEAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWYSYPSKSLPAGLQVD 445

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ ++LK I+L YS  L++ PDL+   NLE L L  C+SL+
Sbjct: 446 ELVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTGIPNLESLILEGCTSLS 505

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+     L+ ++L  CKS+  LP+++  + LK   L GC  L+  P +  + +   
Sbjct: 506 EVHPSLGSHKNLQYVNLVNCKSIRILPSNLEMESLKVFTLDGCLKLEKFPDVVRNMNCLM 565

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI+ L  +G L + SCK L++I SSI  L+ L+ + +  C  L+ +
Sbjct: 566 VLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNI 625

Query: 245 --------EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPSGQCM--FKSLT 286
                    +   ++ GT  ++ P+S   LK         C R    P+   +     L 
Sbjct: 626 PKNLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCKRIAVNPTDHRLPSLSGLC 685

Query: 287 SLEIID-CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           SLE++D C    R   LP+++G L +L  L +       LP+ + QL  L +L L++CS 
Sbjct: 686 SLEVLDLCACNLREGALPEDIGFLSSLRSLDLSQNNFVSLPQSINQLFELERLVLEDCSM 745

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           LE +     K   V+++ ++ C +LK  P+
Sbjct: 746 LESLPEVPSK---VQTVNLNGCISLKEIPD 772



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 247/531 (46%), Gaps = 93/531 (17%)

Query: 283 KSLTSLEIIDCP---NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L+II+     N  R PD L  +  L  LI++G T++ E+   LG    L  + L 
Sbjct: 465 KSALNLKIINLSYSLNLSRTPD-LTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLV 523

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV- 390
           NC  +  + S++ +++S++   +  C  L+ FP++           +D +GI ++ SS+ 
Sbjct: 524 NCKSIRILPSNL-EMESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIR 582

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                  L +N C  L+S+PSS+   KSL  L++  C +L+ +P  LG +E+LEE  V G
Sbjct: 583 HLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESLEEFDVSG 642

Query: 444 TGIREVPKSLAQL-ALSKLKLKKCSSFESLPS--RLYVSKSLTSLEIID-CKNFMR---L 496
           T IR+ P S+  L +L  L    C      P+  RL     L SLE++D C   +R   L
Sbjct: 643 TSIRQPPASIFLLKSLKVLSFDGCKRIAVNPTDHRLPSLSGLCSLEVLDLCACNLREGAL 702

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL 555
           P++IG L  L+ L +       +P+S+ QL  LE LVL D + L+ +PE  +++ ++   
Sbjct: 703 PEDIGFLSSLRSLDLSQNNFVSLPQSINQLFELERLVLEDCSMLESLPEVPSKVQTV--- 759

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
                        L+   SLK           IP+ ++   +S  SEF  L       NC
Sbjct: 760 ------------NLNGCISLK----------EIPDPIK-LSSSKISEFLCL-------NC 789

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQP 673
            +L  +   + +    +++ + G +       +  PGNEIP WF H+S GS+IS++ P  
Sbjct: 790 WELYEHNGQDSMGLTMLERYLKGLSNPRPGFGIVVPGNEIPGWFNHRSKGSSISVQVPSW 849

Query: 674 TGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKIS 733
           +     MGF  CV  +             +    +LF   C  ++ G ++Y S      +
Sbjct: 850 S-----MGFVACVAFSA------------NGESPSLF---CHFKTNGRENYPSPMCISCN 889

Query: 734 HVE--SDHVFLGSSIF-------AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
            ++  SDH++L    F         ++    + E  FH  +   +VK CG+
Sbjct: 890 SIQVLSDHIWLFYLSFDYLIELKEWQHGSFSNIELSFHSSQPRVKVKNCGV 940


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 200/408 (49%), Gaps = 48/408 (11%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSL---EGVPF--TELRYFEWHQFPLKTL-N 60
            E Q N   FSKMT+LRLLK         +H++   EG  +   ELR+ EWH +P K+L  
Sbjct: 1028 EAQWNMTAFSKMTKLRLLK---------IHNVDLSEGPEYLSKELRFLEWHAYPSKSLPA 1078

Query: 61   ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                + LV L M  S + QLW   + LV+LK I+L  S  L   PD +   NLE L L  
Sbjct: 1079 CFRPDELVELYMSCSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEG 1138

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-S 179
            C+SL+E H S     KL++++L  C SL  LP+++  + L+   L  CS L   P +  +
Sbjct: 1139 CASLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNLEMESLEVCTLSSCSKLDKFPDIVGN 1198

Query: 180  CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             +    L L G  I +L SS  CL+ +  L + +CK LE+I SSI  L+ L+ + +  C 
Sbjct: 1199 INCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRLDVSDCS 1258

Query: 240  NLQFL--------EMPSCNIDGTRSKEQPSS--------ELKLKKCPR------PESLP- 276
             L+ +         +   +  GT  ++ P+S         L  K C R       + LP 
Sbjct: 1259 ELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRIAVNLTDQILPS 1318

Query: 277  -SGQCMFKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
             SG C   SL  L++  C   E  +P+++G L +L  L +       LP+ + QL+ L K
Sbjct: 1319 LSGLC---SLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFISLPKSINQLSRLEK 1375

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-IPFCNIDGS 381
            L LK+C  LE +     K   V+ +++  C  LK  P+ I  C++  S
Sbjct: 1376 LALKDCVMLESLPEVPLK---VQKVKLDGCLKLKEIPDPIKLCSLKRS 1420



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 202/445 (45%), Gaps = 95/445 (21%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELE 344
             SL +I+ P+F  +P+       L  LI++G A + E+    G+   L  + L NC  L 
Sbjct: 1115 NSLYLINTPDFTGIPN-------LESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLR 1167

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSS-------- 389
             + S++ +++S+E   +S+CS L  FP+I           +DG+ I ++ SS        
Sbjct: 1168 ILPSNL-EMESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLV 1226

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            +L +N C  LES+PSS+   KSL  L++ DC +L+ +P+ LG +E+LEE    GT IR+ 
Sbjct: 1227 LLSMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQP 1286

Query: 450  PKSLAQLA-LSKLKLKKCSSF------ESLPSRLYVSKSLTSLEIIDCK-NFMRLPDEIG 501
            P S   L  L  L  K C         + LPS L    SL  L++  C      +P++IG
Sbjct: 1287 PTSFFLLKNLKVLSFKGCKRIAVNLTDQILPS-LSGLCSLEELDLCACNLGEGAVPEDIG 1345

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN 560
             L  L+ L +       +P+S+ QLS LE L L D   L+ +PE        V LK+   
Sbjct: 1346 CLSSLRSLNLSRNNFISLPKSINQLSRLEKLALKDCVMLESLPE--------VPLKVQKV 1397

Query: 561  NLE---RIPERLDP--LSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
             L+   ++ E  DP  L SLK                        SEF  L       NC
Sbjct: 1398 KLDGCLKLKEIPDPIKLCSLKR-----------------------SEFKCL-------NC 1427

Query: 616  LKLDPNELSEIIKDGWMKQSVNG-ETYITKS-------MYFPGNEIPKWFRHQSTGSTIS 667
             +L        + +G     +N  E Y+  S       +  PGNEIP WF HQS  S+I 
Sbjct: 1428 WEL-------YMHNGQNNMGLNMLEKYLQGSSPRPGFGIAVPGNEIPGWFTHQSKESSIR 1480

Query: 668  LKTPQ---PTGYNKLMGFAFCVVVA 689
            ++ P        N  MGFA C   +
Sbjct: 1481 VQMPSNYLDGDDNGWMGFAACAAFS 1505



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 15/81 (18%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSL---EGVPF--TELRYFEWHQFPLKTL-N 60
           E   N   FSKMT+LRLLK         +H++   EG  +   ELR+ EWH +P K+L  
Sbjct: 547 EAPWNMTAFSKMTKLRLLK---------IHNVDLSEGPEYLSNELRFLEWHAYPSKSLPA 597

Query: 61  ILHWENLVSLKMPGSKVTQLW 81
               ++LV L M  S + QLW
Sbjct: 598 CFRLDDLVELYMSCSSIEQLW 618


>gi|224109866|ref|XP_002333191.1| predicted protein [Populus trichocarpa]
 gi|222834646|gb|EEE73109.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 203/410 (49%), Gaps = 45/410 (10%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF----CGSKNKCMVH-SLEGVPF--TELRYFEWHQ 53
           MS+++ +I +    F+ M  LR +KF        NK  +H    G+ +   +LRY  W  
Sbjct: 45  MSRLSRQIHLKSDAFAMMDGLRFIKFFFGHLSQDNKDKMHLPPTGLEYLSNKLRYLHWDG 104

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           FP K+L ++   E LV L +  SKV +LW  VQ++ ++++  L YS  LT+LPDLS A+N
Sbjct: 105 FPSKSLPHVFCAEYLVELNLSRSKVEKLWTRVQDVGNVQKFVLSYSPYLTELPDLSKARN 164

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  L L  C SLTE   S+QYL+KLE LDL+ C +L S P  + SK LK L +  C ++ 
Sbjct: 165 LVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPM-LDSKVLKVLSISRCLDMT 223

Query: 173 NLP----KMTSCHLRSTLPLLGVGIEELPSSIKC-LSNIGELLIYSCKRLENIS--SSIF 225
             P     M S +L  T       I+E+P SI   L N+G   ++ C ++      S   
Sbjct: 224 KCPTISQNMKSLYLEET------SIKEVPQSITSKLENLG---LHGCSKITKFPEISGDV 274

Query: 226 KLQFLESIRIHRCP-NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
           K  +L    I   P ++QFL         TR +      L +  C + ESLP      +S
Sbjct: 275 KTLYLSGTAIKEVPSSIQFL---------TRLE-----VLDMSGCSKLESLPEITVPMES 320

Query: 285 LTSLEIIDCPNFERLPDEL-GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           L SL++      + +P  L  ++ +L  L +DGT I+ LPE    L  L+     +C+ L
Sbjct: 321 LHSLKLSKT-GIKEIPSSLIKHMISLRFLKLDGTPIKALPELPPSLRYLTT---HDCASL 376

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           E ++SSI   +    ++ +NC  L   P +   ++     E IP   +++
Sbjct: 377 ETVTSSINIGRLELGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPHGGIQM 426



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 171/367 (46%), Gaps = 56/367 (15%)

Query: 368 KGFPEIPFC-------NIDGSGIERIPSSVLKLNKCSK--------LESLPSSLCMFKSL 412
           K  P + FC       N+  S +E++ + V  +    K        L  LP  L   ++L
Sbjct: 108 KSLPHV-FCAEYLVELNLSRSKVEKLWTRVQDVGNVQKFVLSYSPYLTELPD-LSKARNL 165

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP----KSLAQLALSK-LKLKKC 466
            SL ++DC  L  +P  L  L+ LEEL +     +R  P    K L  L++S+ L + KC
Sbjct: 166 VSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDSKVLKVLSISRCLDMTKC 225

Query: 467 SSFESLPSRLY--------VSKSLTS----LEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
            +       LY        V +S+TS    L +  C    + P+  G++   K L + GT
Sbjct: 226 PTISQNMKSLYLEETSIKEVPQSITSKLENLGLHGCSKITKFPEISGDV---KTLYLSGT 282

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERL-DPL 572
           AI+EVP S+  L+ LE L +S  + L+ +PE    + SL SLKLS   ++ IP  L   +
Sbjct: 283 AIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSSLIKHM 342

Query: 573 SSLKYLDLFENNLDRIPE------YLRSFPTSIPSEFTS------LRLSVDLRNCLKLDP 620
            SL++L L    +  +PE      YL +   +     TS      L L +D  NC KLD 
Sbjct: 343 ISLRFLKLDGTPIKALPELPPSLRYLTTHDCASLETVTSSINIGRLELGLDFTNCFKLDQ 402

Query: 621 NELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM 680
             L   +      QS     +    M  PG+EIP+WF  +  GS+++++   P+  ++L 
Sbjct: 403 KPLVAAMH--LKIQSGEEIPHGGIQMVLPGSEIPEWFGEKGIGSSLTMQL--PSNCHQLK 458

Query: 681 GFAFCVV 687
           G AFC+V
Sbjct: 459 GIAFCLV 465



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 49/249 (19%)

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP----EGLGQLALLSKLEL 337
           ++L SL ++DCP+   +P  L  L  L  L ++    +R  P    + L  L++   L++
Sbjct: 163 RNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDSKVLKVLSISRCLDM 222

Query: 338 KNCSELEYISSSIF----KLKSV--------ESIEISNCSNLKGFPEIP----FCNIDGS 381
             C  +     S++     +K V        E++ +  CS +  FPEI        + G+
Sbjct: 223 TKCPTISQNMKSLYLEETSIKEVPQSITSKLENLGLHGCSKITKFPEISGDVKTLYLSGT 282

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLEALEE 438
            I+ +PSS+                   + LT LE++D   C KLE LP+    +E+L  
Sbjct: 283 AIKEVPSSI-------------------QFLTRLEVLDMSGCSKLESLPEITVPMESLHS 323

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLK-KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           L++  TGI+E+P SL +  +S   LK   +  ++LP    +  SL  L   DC +   + 
Sbjct: 324 LKLSKTGIKEIPSSLIKHMISLRFLKLDGTPIKALPE---LPPSLRYLTTHDCASLETVT 380

Query: 498 D--EIGNLE 504
               IG LE
Sbjct: 381 SSINIGRLE 389


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 176/370 (47%), Gaps = 55/370 (14%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTE--------------LRYFEWH 52
           EIQ N   F KM +LRLLK       C  H  +G+P  E              LRY  W 
Sbjct: 545 EIQFNTKVFPKMKKLRLLKI-----YCNDH--DGLPREEYKVLLPKDFEFPHDLRYLHWQ 597

Query: 53  QFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +  L +L    + ++L+ + +  S + QLW   + L  LK IDL  SK L K+P  S   
Sbjct: 598 RCTLTSLPWNFYGKHLLEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQLVKMPKFSSMP 657

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSN 170
           NLE L+L  C+ L E HSSI +L +L+ L+L+ C++L SLP SI   K L+ L L GCSN
Sbjct: 658 NLERLNLEGCTRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSN 717

Query: 171 LKNLPKMT-SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           L+   ++T        L L   GI ELPSSI+ +  +  L + +C+ L  + +SI  L  
Sbjct: 718 LEAFSEITEDMEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTC 777

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L S+ +  CP L  L                           P++L S QC    LT L+
Sbjct: 778 LTSLHVRNCPKLHNL---------------------------PDNLRSLQC---CLTMLD 807

Query: 290 IIDCPNF-ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +  C    E +P++L  L +L  L +    +R +P G+ QL  L  L + +C  LE I  
Sbjct: 808 LGGCNLMEEEIPNDLWCLSSLEFLNVSENHMRCIPAGITQLCKLGTLLMNHCPMLEVIGE 867

Query: 349 SIFKLKSVES 358
               L  +E+
Sbjct: 868 LPSSLGWIEA 877



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 142/356 (39%), Gaps = 78/356 (21%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
            ++ + L  L   RC +LTSLP + + K+L  + L+  SN+K L K      +    L G
Sbjct: 585 FEFPHDLRYLHWQRC-TLTSLPWNFYGKHLLEINLKS-SNIKQLWKGN----KRLKELKG 638

Query: 191 VGIEELPSSIK-----CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
           + +      +K      + N+  L +  C RL  + SSI  L  L+ + +  C NL+   
Sbjct: 639 IDLSNSKQLVKMPKFSSMPNLERLNLEGCTRLRELHSSIGHLTRLDPLNLENCRNLK--- 695

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
                                       SLP+  C  KSL  L +  C N E   +   +
Sbjct: 696 ----------------------------SLPNSICGLKSLEGLSLNGCSNLEAFSEITED 727

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           ++ L RL +  T I ELP  +  +  L  LEL NC  L  + +SI  L  + S+ + NC 
Sbjct: 728 MEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCP 787

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL-E 424
            L   P+                          L SL   L M      L++  C  + E
Sbjct: 788 KLHNLPD-------------------------NLRSLQCCLTM------LDLGGCNLMEE 816

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE---SLPSRL 476
            +P++L  L +LE L V    +R +P  + QL  L  L +  C   E    LPS L
Sbjct: 817 EIPNDLWCLSSLEFLNVSENHMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSL 872



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 205/486 (42%), Gaps = 110/486 (22%)

Query: 390  VLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIR 447
            +L++N K S ++ L       K L  +++ + K+L ++P +  ++  LE L +EG T +R
Sbjct: 613  LLEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQLVKMP-KFSSMPNLERLNLEGCTRLR 671

Query: 448  EVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            E+  S+  L  L  L L+ C + +SLP+ +   KSL  L +  C N     +   ++E L
Sbjct: 672  ELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSEITEDMEQL 731

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN------ 559
            + L ++ T I E+P S+  +  L+ L L +  NL  +P S+  L+ L SL + N      
Sbjct: 732  ERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHN 791

Query: 560  --NNL-------------------ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
              +NL                   E IP  L  LSSL++L++ EN++             
Sbjct: 792  LPDNLRSLQCCLTMLDLGGCNLMEEEIPNDLWCLSSLEFLNVSENHM-----------RC 840

Query: 599  IPSEFTSL-RLSVDLRN-CLKLDPNELSEIIKD-----GWMKQ----SVNGETYITK--- 644
            IP+  T L +L   L N C  L      E+I +     GW++     S+  ET  +    
Sbjct: 841  IPAGITQLCKLGTLLMNHCPML------EVIGELPSSLGWIEAHGCPSLETETSSSLLWS 894

Query: 645  --------------SMYFPGNE-IPKWFRHQSTGSTISLKTPQP--TGYNKLMGFAF--- 684
                          ++  PG+  IP+W  HQ  G  +S++ P       N L+GF     
Sbjct: 895  SLLKHLKSPIQRRLNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLLGFVLFFH 954

Query: 685  --------CVVVACSVSECC----------RHESVEDDRKCNLFDVV-CDRRSEGYDSYT 725
                    CV  +  + EC           R +++    +C  + +      S  YDS +
Sbjct: 955  HVPLDDDECVRTSGFIPECKLAISHGDQTERLDNISFYHRCKTYSISGLSYSSRRYDSGS 1014

Query: 726  SS-------YLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFV 778
            +S       Y  +I  + S +     + F         +  F   + +  +VK CGIH +
Sbjct: 1015 TSDPALWVTYFPQI-RIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLI 1073

Query: 779  HAQRQR 784
            +AQ Q+
Sbjct: 1074 YAQDQK 1079


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 184/365 (50%), Gaps = 31/365 (8%)

Query: 8   IQINPYTFSKMTELRLLKFC------GSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL 59
           ++++   F  M  L+ LK        G + +  +H   G+ F   EL Y  WH +PL+++
Sbjct: 554 MRLSAKAFQGMYNLKYLKIYDSHCSRGCEAEFKLHLRRGLSFLPNELTYLHWHGYPLQSI 613

Query: 60  NI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            +    +NLV LK+P S++ ++WDD +++  LK +DL +S  L +   L+ A NLE L+L
Sbjct: 614 PLDFDPKNLVDLKLPHSQLEEIWDDEKDVGMLKWVDLSHSINLRQCLGLANAHNLERLNL 673

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
             C+SL +  S+I  L KL  L+L  C SL SLP  I ++ L+ L+L GCS+LK  P ++
Sbjct: 674 EGCTSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGIKTQSLQTLILSGCSSLKKFPLIS 733

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                  L L G  I+ LP SI+    +  L + +CK+L+++SS ++KL+ L+ + +  C
Sbjct: 734 EN--VEVLLLDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGC 791

Query: 239 PNLQFL-----EMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQCMF---- 282
             L+       +M S  I   D T   E P     S +K        S  S    F    
Sbjct: 792 SQLEVFPEIKEDMESLEILLMDDTSITEMPKMMHLSNIKTFSLCGTSSHVSVSMFFMPPT 851

Query: 283 ---KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                LT L +  C  + +LPD +G L +L  L + G  I  LPE   QL  L   +LK 
Sbjct: 852 LGCSRLTDLYLSRCSLY-KLPDNIGGLSSLQSLCLSGNNIENLPESFNQLNNLKWFDLKF 910

Query: 340 CSELE 344
           C  L+
Sbjct: 911 CKMLK 915



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 243/547 (44%), Gaps = 122/547 (22%)

Query: 303  LGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            L N   L RL ++G T++++LP  +  L  L  L L++C+ L  +   I K +S++++ +
Sbjct: 662  LANAHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGI-KTQSLQTLIL 720

Query: 362  SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
            S CS+LK FP I         +E     VL L+  + ++SLP S+  F+ L  L + +CK
Sbjct: 721  SGCSSLKKFPLI------SENVE-----VLLLDG-TVIKSLPESIQTFRRLALLNLKNCK 768

Query: 422  KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
            KL+ L  +L  L+ L+EL + G                      CS  E  P    + + 
Sbjct: 769  KLKHLSSDLYKLKCLQELILSG----------------------CSQLEVFPE---IKED 803

Query: 482  LTSLEII--DCKNFMRLPDEIGNLEYLKVLTIKGTA------IREVPESLGQLSSLEWLV 533
            + SLEI+  D  +   +P ++ +L  +K  ++ GT+      +  +P +LG  S L  L 
Sbjct: 804  MESLEILLMDDTSITEMP-KMMHLSNIKTFSLCGTSSHVSVSMFFMPPTLG-CSRLTDLY 861

Query: 534  LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL-FENNLDRIP--- 589
            LS  +L  +P+++  LSSL SL LS NN+E +PE  + L++LK+ DL F   L  +P   
Sbjct: 862  LSRCSLYKLPDNIGGLSSLQSLCLSGNNIENLPESFNQLNNLKWFDLKFCKMLKSLPVLP 921

Query: 590  ---EYLRSF-------------PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK 633
               +YL +              P ++     S+ +     NC KL+ +  + ++    +K
Sbjct: 922  QNLQYLDAHECESLETLANPLTPLTVGERIHSMFI---FSNCYKLNQDAQASLVGHARIK 978

Query: 634  QSVNGETYITK-----------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGF 682
              +       +            + +P  EIP WF HQ  G ++ +  P        +G 
Sbjct: 979  SQLMANASAKRYYRGFVPEPLVGICYPATEIPSWFCHQRLGRSLEIPLPPHWCDINFVGL 1038

Query: 683  AFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY----------LGKI 732
            A  VVV+         +  ED  K   F V C    E  DS  + +           G +
Sbjct: 1039 ALSVVVS--------FKDYEDSAK--RFSVKCCGNFENKDSSFTRFDFTLAGWNEPCGSL 1088

Query: 733  SH----VESDHVFLG-------SSIFAGENSC---KRSDEFFFHIDRS-----CCEVKKC 773
            SH    + SDHVF+G        ++    NSC   K S EF+   D +      CEV KC
Sbjct: 1089 SHESRKLTSDHVFMGYNSCFLVKNVHGESNSCCYTKASFEFYVTDDETRKKIETCEVIKC 1148

Query: 774  GIHFVHA 780
            G+  ++ 
Sbjct: 1149 GMSLMYV 1155


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 250/564 (44%), Gaps = 123/564 (21%)

Query: 317  TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
            + +REL +G   L  L+ +EL N   L ++ +    + ++E + +  C+ +    E+PF 
Sbjct: 619  SYMRELWKGNEVLDNLNTIELSNSQHLIHLPN-FSSMPNLERLVLEGCTTIS---ELPFS 674

Query: 377  NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
                +G+      +L L  C +L+SLPSS+C  KSL +L +  C KLE  P+ + N+E L
Sbjct: 675  IGYLTGL-----ILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENMEHL 729

Query: 437  EELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            ++L ++GT ++++  S+  L  L  L L+ C +  +LP  +   KSL +L +  C    +
Sbjct: 730  KKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQ 789

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE---------------------WLV- 533
            LP+ +G+L+ L  L   GT +R+ P S+  L +LE                     WL+ 
Sbjct: 790  LPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLP 849

Query: 534  ------------------------LSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPE 567
                                    +SD NL    +P  +  LSSL +L LS NN   +P 
Sbjct: 850  RKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSRNNFFSLPA 909

Query: 568  RLDPLSSLKYLDLFE-NNLDRIPEYLRSF----------------PTSIPSEFTSLR-LS 609
             +  LS L++L L    +L +IPE   S                 P+S+ +     R L 
Sbjct: 910  GISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVCRWLV 969

Query: 610  VDLRNCLKLDP-----NELSEI-----IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
              L NC  LD      N+++ I     I    +++  N       S++ PG+EIP W  +
Sbjct: 970  FTLPNCFNLDAENPCSNDMAIISPRMQIVTNMLQKLQNFLPDFGFSIFLPGSEIPDWISN 1029

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVA--------CSVSECCRHESVEDDRKC---N 708
            Q+ GS ++++ P     +  +GFA C V A        CS    C+ +S E   +     
Sbjct: 1030 QNLGSEVTIELPPHWFESNFLGFAVCCVFAFEDIAPNGCSSQLLCQLQSDESHFRGIGHI 1089

Query: 709  LFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSS------IFAGE--NSCKRSDEFF 760
            L  + C+  SE               ++S H++L         I  G+  N  + +   F
Sbjct: 1090 LHSIDCEGNSE-------------DRLKSHHMWLAYKPRGRLRISYGDCPNRWRHAKASF 1136

Query: 761  FHIDRSCCE---VKKCGIHFVHAQ 781
              I  SCC    V+KCGIH ++AQ
Sbjct: 1137 GFI--SCCPSNMVRKCGIHLIYAQ 1158



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 210/435 (48%), Gaps = 53/435 (12%)

Query: 7   EIQINPYTFSKMTELRLLK---FCGSKNKCMVHSLE---GVPFTELRYFEWHQFPLKTL- 59
           EIQ     F+KM  LRLLK   F G   +     L      P  ELRY  WH +P  +L 
Sbjct: 544 EIQFTTEAFAKMNRLRLLKVFNFSGIGKEGYKEPLSVSFEFPSYELRYLYWHGYPFGSLP 603

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +  H ENL+ L M  S + +LW   + L +L  I+L  S+ L  LP+ S   NLE L L 
Sbjct: 604 SKFHSENLIELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPNFSSMPNLERLVLE 663

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMT 178
            C++++E   SI YL  L +LDL+ CK L SLP+SI   K L+ L+L  CS L++ P++ 
Sbjct: 664 GCTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIM 723

Query: 179 SC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
               HL+  L L G  +++L  SI+ L+ +  L +  CK L  +  SI  L+ LE++ + 
Sbjct: 724 ENMEHLKKLL-LDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVS 782

Query: 237 RCPNLQFLE--------MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            C  LQ L         +     DGT  ++ PSS + L+     E L  G C  K L S 
Sbjct: 783 GCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNL---EILSFGGC--KGLASN 837

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELP-------EGLGQLAL--LSKLELK 338
                 +F  LP +  +   L    + G  ++REL        EG     +  LS LE  
Sbjct: 838 SWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETL 897

Query: 339 NCSELEYIS--SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK- 395
           N S   + S  + I KL  +  + +++C +L   PE             +PSS++++N  
Sbjct: 898 NLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPE-------------LPSSIIEVNAQ 944

Query: 396 -CSKLESL--PSSLC 407
            CS L ++  PSS+C
Sbjct: 945 YCSSLNTILTPSSVC 959



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 51/282 (18%)

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSLEI 290
           PNL+ L +  C    T   E P S         L L+ C R +SLPS  C  KSL +L +
Sbjct: 655 PNLERLVLEGC----TTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLIL 710

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   E  P+ + N++ L +L++DGTA+++L   +  L  L  L L++C  L  +  SI
Sbjct: 711 SACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSI 770

Query: 351 FKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS--------VLKLNK 395
             LKS+E++ +S CS L+  PE       +     DG+ + + PSS        +L    
Sbjct: 771 GNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGG 830

Query: 396 CSKLES-----------LPS-----------SLCMFKSLTSLEIIDCKKLE-RLPDELGN 432
           C  L S           LP            SL    SL  L+I DC  +E  +P ++ N
Sbjct: 831 CKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICN 890

Query: 433 LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
           L +LE L +       +P  +++L+ L  L L  C S   +P
Sbjct: 891 LSSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIP 932



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 25/265 (9%)

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKG------------FP--EIPFCNIDG 380
           L++    E+++ + +  K+  +  +++ N S +              FP  E+ +    G
Sbjct: 537 LDMYRSKEIQFTTEAFAKMNRLRLLKVFNFSGIGKEGYKEPLSVSFEFPSYELRYLYWHG 596

Query: 381 SGIERIPS-----SVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
                +PS     ++++LN C S +  L     +  +L ++E+ + + L  LP+   ++ 
Sbjct: 597 YPFGSLPSKFHSENLIELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPN-FSSMP 655

Query: 435 ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            LE L +EG T I E+P S+  L  L  L L+ C   +SLPS +   KSL +L +  C  
Sbjct: 656 NLERLVLEGCTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSK 715

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSS 551
               P+ + N+E+LK L + GTA++++  S+  L+ L  L L D  NL  +P S+  L S
Sbjct: 716 LESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKS 775

Query: 552 LVSLKLSN-NNLERIPERLDPLSSL 575
           L +L +S  + L+++PE L  L  L
Sbjct: 776 LETLIVSGCSKLQQLPENLGSLQCL 800


>gi|297815592|ref|XP_002875679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321517|gb|EFH51938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1196

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 212/446 (47%), Gaps = 50/446 (11%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCG---SKNKCMVHSLEGVPF--TELRYFEWHQFP 55
           +SK   E+ I+     +M + + ++  G    + K +   L+G+ +   ++R   W  F 
Sbjct: 579 LSKTEEELNISEKALERMHDFQFVRIYGDDLGQTKRLQSVLQGLIYHSQKIRSLNWRYFQ 638

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
              L +  + E LV L +  SK+ +LW+  + L +LK +DL  S+ L +LPDLS A NLE
Sbjct: 639 DICLPSTFNPEFLVELNLQDSKLQKLWEGTKQLKNLKWMDLGGSRDLKELPDLSTATNLE 698

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            +DL YCSSL E  SSI    KLE L L  C SL  LP+  ++  L+RL L  CS+L  L
Sbjct: 699 EVDLQYCSSLVELPSSIGNATKLERLYLRDCSSLVELPSIGNASKLERLYLDNCSSLVKL 758

Query: 175 PKM-----------TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           P              +  L     L    + ELP SI   +N+ EL I  C  L  + SS
Sbjct: 759 PSSINASNLQEFIENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVKLPSS 818

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           I  +  L+   +  C +L  +E+PS        K Q  S+LK+  C + E LP+     +
Sbjct: 819 IGDMTKLKKFDLSNCSSL--VEVPSA-----IGKLQKLSKLKMYGCSKLEVLPTN-IDLE 870

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL---KNC 340
           SL +L++ +C   +R P+   N+  L    + GTAI+E+P  +   + L    +   ++ 
Sbjct: 871 SLRTLDLRNCSQLKRFPEISTNIAYLR---LTGTAIKEVPLSIMSWSRLYDFGISYFESL 927

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
            E  +    I +L+  E I+             P+      G+ R+   VL+L  C+ L 
Sbjct: 928 KEFPHALDIITQLQLNEDIQ----------EVAPWVK----GMSRL--RVLRLYNCNNLV 971

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERL 426
           SLP       SL  ++  +C+ LERL
Sbjct: 972 SLPQ---FSDSLAYIDADNCQSLERL 994



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 227/538 (42%), Gaps = 110/538 (20%)

Query: 284  SLTSLEIID---CPNFERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKN 339
            + T+LE +D   C +   LP  +GN   L RL + D +++ ELP  +G  + L +L L N
Sbjct: 693  TATNLEEVDLQYCSSLVELPSSIGNATKLERLYLRDCSSLVELP-SIGNASKLERLYLDN 751

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNIDGSGIERIPSSV---- 390
            CS L  + SSI            N SNL+ F E          ++ S +  +P S+    
Sbjct: 752  CSSLVKLPSSI------------NASNLQEFIENASKLWELNLLNCSSLLELPPSIGTAT 799

Query: 391  ----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                L ++ CS L  LPSS+     L   ++ +C  L  +P  +G L+            
Sbjct: 800  NLKELYISGCSSLVKLPSSIGDMTKLKKFDLSNCSSLVEVPSAIGKLQ------------ 847

Query: 447  REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
                       LSKLK+  CS  E LP+ + + +SL +L++ +C    R P+   N+ YL
Sbjct: 848  ----------KLSKLKMYGCSKLEVLPTNIDL-ESLRTLDLRNCSQLKRFPEISTNIAYL 896

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ----LSSLVSLKLSNNNL 562
            +   + GTAI+EVP     LS + W  L D  +    ESL +    L  +  L+L N ++
Sbjct: 897  R---LTGTAIKEVP-----LSIMSWSRLYDFGISYF-ESLKEFPHALDIITQLQL-NEDI 946

Query: 563  ERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLRN------ 614
            + +   +  +S L+ L L+  NNL  +P++  S          SL RL     N      
Sbjct: 947  QEVAPWVKGMSRLRVLRLYNCNNLVSLPQFSDSLAYIDADNCQSLERLDCTFNNPDIHLK 1006

Query: 615  ---CLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLK- 669
               C  L+  E  ++I            T  ++    PG ++P  F H++T G  +  K 
Sbjct: 1007 FPKCFNLN-QEARDLIM----------HTSTSEYAILPGTQVPACFNHRATAGGLVEFKL 1055

Query: 670  --TPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSS 727
              +P P        F F  V           E+ +     N++  + D ++ G +     
Sbjct: 1056 NESPLPRALRFKACFMFVKV---------NEETGDGWSSINVYHDIMDNQN-GLNVRRKP 1105

Query: 728  YLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHI---DRSCCEVKKCGIHFVHAQR 782
                I  V ++H++    IF        S E FF +   + S  ++++CG+  +  Q+
Sbjct: 1106 RKCYIDRVLTEHIY----IFEVRAEKVTSTELFFEVKTENDSNWKIRECGLFQILEQK 1159



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 47/234 (20%)

Query: 422 KLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           KL++L +    L+ L+ + + G+  ++E+P       L ++ L+ CSS   LPS +  + 
Sbjct: 660 KLQKLWEGTKQLKNLKWMDLGGSRDLKELPDLSTATNLEEVDLQYCSSLVELPSSIGNAT 719

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVL-------------TIKGTAIR---------- 517
            L  L + DC + + LP  IGN   L+ L             +I  + ++          
Sbjct: 720 KLERLYLRDCSSLVELP-SIGNASKLERLYLDNCSSLVKLPSSINASNLQEFIENASKLW 778

Query: 518 -----------EVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLER 564
                      E+P S+G  ++L+ L +S  ++L  +P S+  ++ L    LSN ++L  
Sbjct: 779 ELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVKLPSSIGDMTKLKKFDLSNCSSLVE 838

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
           +P  +  L  L  L ++  +       L   PT+I  E  SLR ++DLRNC +L
Sbjct: 839 VPSAIGKLQKLSKLKMYGCS------KLEVLPTNIDLE--SLR-TLDLRNCSQL 883


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1778

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 200/408 (49%), Gaps = 48/408 (11%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSL---EGVPF--TELRYFEWHQFPLKTL-N 60
            E Q N   FSKMT+LRLLK         +H++   EG  +   ELR+ EWH +P K+L  
Sbjct: 1047 EAQWNMTAFSKMTKLRLLK---------IHNVDLSEGPEYLSKELRFLEWHAYPSKSLPA 1097

Query: 61   ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                + LV L M  S + QLW   + LV+LK I+L  S  L   PD +   NLE L L  
Sbjct: 1098 CFRPDELVELYMSCSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEG 1157

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-S 179
            C+SL+E H S     KL++++L  C SL  LP+++  + L+   L  CS L   P +  +
Sbjct: 1158 CASLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNLEMESLEVCTLSSCSKLDKFPDIVGN 1217

Query: 180  CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             +    L L G  I +L SS  CL+ +  L + +CK LE+I SSI  L+ L+ + +  C 
Sbjct: 1218 INCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRLDVSDCS 1277

Query: 240  NLQFL--------EMPSCNIDGTRSKEQPSS--------ELKLKKCPR------PESLP- 276
             L+ +         +   +  GT  ++ P+S         L  K C R       + LP 
Sbjct: 1278 ELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRIAVNLTDQILPS 1337

Query: 277  -SGQCMFKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
             SG C   SL  L++  C   E  +P+++G L +L  L +       LP+ + QL+ L K
Sbjct: 1338 LSGLC---SLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFISLPKSINQLSRLEK 1394

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-IPFCNIDGS 381
            L LK+C  LE +     K   V+ +++  C  LK  P+ I  C++  S
Sbjct: 1395 LALKDCVMLESLPEVPLK---VQKVKLDGCLKLKEIPDPIKLCSLKRS 1439



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 192/421 (45%), Gaps = 92/421 (21%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELE 344
             SL +I+ P+F  +P+       L  LI++G A + E+    G+   L  + L NC  L 
Sbjct: 1134 NSLYLINTPDFTGIPN-------LESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLR 1186

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSS-------- 389
             + S++ +++S+E   +S+CS L  FP+I           +DG+ I ++ SS        
Sbjct: 1187 ILPSNL-EMESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLV 1245

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            +L +N C  LES+PSS+   KSL  L++ DC +L+ +P+ LG +E+LEE    GT IR+ 
Sbjct: 1246 LLSMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQP 1305

Query: 450  PKSLAQLA-LSKLKLKKCSSF------ESLPSRLYVSKSLTSLEIIDCK-NFMRLPDEIG 501
            P S   L  L  L  K C         + LPS L    SL  L++  C      +P++IG
Sbjct: 1306 PTSFFLLKNLKVLSFKGCKRIAVNLTDQILPS-LSGLCSLEELDLCACNLGEGAVPEDIG 1364

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN 560
             L  L+ L +       +P+S+ QLS LE L L D   L+ +PE        V LK+   
Sbjct: 1365 CLSSLRSLNLSRNNFISLPKSINQLSRLEKLALKDCVMLESLPE--------VPLKVQKV 1416

Query: 561  NLE---RIPERLDP--LSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
             L+   ++ E  DP  L SLK                        SEF  L       NC
Sbjct: 1417 KLDGCLKLKEIPDPIKLCSLKR-----------------------SEFKCL-------NC 1446

Query: 616  LKLDPNELSEIIKDGWMKQSVNG-ETYITKS-------MYFPGNEIPKWFRHQSTGSTIS 667
             +L        + +G     +N  E Y+  S       +  PGNEIP WF HQS  S  +
Sbjct: 1447 WEL-------YMHNGQNNMGLNMLEKYLQGSSPRPGFGIAVPGNEIPGWFTHQSCNSMQA 1499

Query: 668  L 668
            L
Sbjct: 1500 L 1500



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 15/87 (17%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSL---EGVPF--TELRYFEWHQFPLKTL-N 60
           E   N   FSKMT+LRLLK         +H++   EG  +   ELR+ EWH +P K+L  
Sbjct: 597 EAPWNMTAFSKMTKLRLLK---------IHNVDLSEGPEYLSNELRFLEWHAYPSKSLPA 647

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNL 87
               ++LV L M  S + QL D+ Q++
Sbjct: 648 CFRLDDLVELYMSCSSIEQLCDESQSI 674


>gi|7488170|pir||D71437 probable resistance gene - Arabidopsis thaliana
          Length = 2467

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 188/716 (26%), Positives = 312/716 (43%), Gaps = 116/716 (16%)

Query: 10  INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLV 68
           I+  +F  M  L+ LK     +     SL  +P  +LR  +W   PLK+L +    E LV
Sbjct: 362 IDKESFKGMRNLQYLKIGDWSDGGQPQSLVYLPL-KLRLLDWDDCPLKSLPSTFKAEYLV 420

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
           +L M  SK+ +LW+    L SLK+++L  SK L ++PDLS A+NLE LDL  C SL    
Sbjct: 421 NLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLP 480

Query: 129 SSIQYLNKLE--------VLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           SSIQ   KL         ++DL   + + +         L+ L+   C  LK L      
Sbjct: 481 SSIQNAIKLRKLHCSGVILIDLKSLEGMCTQGIVYFPSKLRLLLWNNCP-LKRLHSNFKV 539

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                L +    +E+L    + L  + ++ +   K L+ I                  P+
Sbjct: 540 EYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEI------------------PD 581

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L      + N++    K      L +  C + ES P+     +SL  L +  CPN    P
Sbjct: 582 LSL----AINLEENAIK---LIYLDISDCKKLESFPT-DLNLESLEYLNLTGCPNLRNFP 633

Query: 301 ------DELGNLQALNRLII-DGTAIRELPEGLGQLALLSKL---ELK---------NCS 341
                  ++   +  N +++ D    + LP GL  L  L +    E +          C 
Sbjct: 634 AIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNVRCY 693

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           + E +   I  L S+E +++S   NL   P++       + ++      L LN C  L +
Sbjct: 694 KHEKLWEGIQSLGSLEEMDLSESENLTEIPDLS----KATNLKH-----LYLNNCKSLVT 744

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSK 460
           LPS++   + L  LE+ +C  LE LP ++ NL +LE L + G + +R  P  L   ++  
Sbjct: 745 LPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLETLDLSGCSSLRTFP--LISKSIKW 801

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L+  +  E L   L  +  L SL + +CK+ + LP  IGNL+ L+ L +K     EV 
Sbjct: 802 LYLENTAIEEILD--LSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVL 859

Query: 521 ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS------NNNLERIPERLDPLS 573
            +   LSSL  L LS  +N + + ++L+  + + +++ S      + N+E   ER     
Sbjct: 860 PTDVNLSSLGILDLSGCSNCRGVIKALSDATVVATMEDSVSCVPLSENIEYTCERF---- 915

Query: 574 SLKYLDLF-ENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWM 632
              + +L+ + + D   EY                     RNC KLD +    I++  + 
Sbjct: 916 ---WGELYGDGDWDLGTEYF------------------SFRNCFKLDRDARELILRSCF- 953

Query: 633 KQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
                      K +  PG EIPK+F +++ G ++++  P+ +     + F  C+VV
Sbjct: 954 -----------KPVALPGGEIPKYFTYRAYGDSLTVTLPRSSLSQSFLRFKACLVV 998



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 202/471 (42%), Gaps = 98/471 (20%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            +L++  W   PLK L +    E LV L+M  S + +LW+  Q L SLK+++L+ S  L +
Sbjct: 1729 KLKWLRWENCPLKRLPSNFKAEYLVELRMENSALEKLWNGTQPLGSLKKMNLRNSNNLKE 1788

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            +PDLSLA NLE LDL  C+                      C+ L S P+ ++S+ LK L
Sbjct: 1789 IPDLSLATNLEELDL--CN----------------------CEVLESFPSPLNSESLKFL 1824

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L  C  L+N P++    ++S +    + IE       CL N                 +
Sbjct: 1825 NLLLCPRLRNFPEII---MQSFIFTDEIEIE----VADCLWN----------------KN 1861

Query: 224  IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
            +  L +L+ +R  RC   +F             + +    L ++     E L  G     
Sbjct: 1862 LPGLDYLDCLR--RCNPSKF-------------RPEHLKNLTVRGNNMLEKLWEGVQSLG 1906

Query: 284  SLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             L  +++ +C N   +PD  +  NL+ L+  + +  ++  LP  +G L  L  L ++ C+
Sbjct: 1907 KLKRVDLSECENMIEIPDLSKATNLEILD--LSNCKSLVMLPSTIGNLQKLYTLNMEECT 1964

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS 397
             L+ +   I  L S+ ++ +  CS+L+  P+    I   N+D + IE +P          
Sbjct: 1965 GLKVLPMDI-NLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTAIEEVP---------- 2013

Query: 398  KLESLPSSLCM--FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                     C   F  L  L +  CK L R P       +++EL +  T I +VP  + +
Sbjct: 2014 ---------CFENFSRLMELSMRGCKSLRRFPQ---ISTSIQELNLADTAIEQVPCFIEK 2061

Query: 456  LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM-RLPDEIGNLE 504
             + L  L +  C   +++   ++    L  ++  DC   +  L D +  +E
Sbjct: 2062 FSRLKVLNMSGCKMLKNISPNIFRLTRLMKVDFTDCGGVITALSDPVTTME 2112



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 223/495 (45%), Gaps = 71/495 (14%)

Query: 222  SSIFKLQFLESIRIHRCPNLQFL----EMPSCNIDGTRSKEQP-SSE----LKLKKCPRP 272
             S+ K+    S  +   P+L       E+  CN +   S   P +SE    L L  CPR 
Sbjct: 1773 GSLKKMNLRNSNNLKEIPDLSLATNLEELDLCNCEVLESFPSPLNSESLKFLNLLLCPRL 1832

Query: 273  ESLPS---GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             + P       +F     +E+ DC   + LP  L  L  L R   + +  R  PE L  L
Sbjct: 1833 RNFPEIIMQSFIFTDEIEIEVADCLWNKNLPG-LDYLDCLRR--CNPSKFR--PEHLKNL 1887

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             +      +  + LE +   +  L  ++ +++S C N+   P++       + +E     
Sbjct: 1888 TV------RGNNMLEKLWEGVQSLGKLKRVDLSECENMIEIPDLS----KATNLE----- 1932

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIRE 448
            +L L+ C  L  LPS++   + L +L + +C  L+ LP ++ NL +L  + ++G + +R 
Sbjct: 1933 ILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDI-NLSSLHTVHLKGCSSLRF 1991

Query: 449  VP---KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
            +P   KS+A L L    +++   FE+  SRL        L +  CK+  R P    +++ 
Sbjct: 1992 IPQISKSIAVLNLDDTAIEEVPCFENF-SRL------MELSMRGCKSLRRFPQISTSIQE 2044

Query: 506  LKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L    +  TAI +VP  + + S L+ L +S    L+ I  ++ +L+ L+ +  ++     
Sbjct: 2045 L---NLADTAIEQVPCFIEKFSRLKVLNMSGCKMLKNISPNIFRLTRLMKVDFTDCG-GV 2100

Query: 565  IPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL----------RLSVDLR 613
            I    DP+++++  +  + N +++ P+  +        E+              +    +
Sbjct: 2101 ITALSDPVTTMEDQNNEKINKVEKRPKCDKDEDDEDEYEYEYDEDEDDEDEYGEIYFKFQ 2160

Query: 614  NCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQP 673
            NC KLD             ++ + G  + T +M  PG E+P +F+HQ+ G+++++  PQ 
Sbjct: 2161 NCFKLDRA----------ARELILGSCFKT-TMVLPGGEVPTYFKHQAYGNSLTVTLPQS 2209

Query: 674  TGYNKLMGFAFCVVV 688
            +  +K + F  C+VV
Sbjct: 2210 SLSHKFLRFNACLVV 2224


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 202/410 (49%), Gaps = 45/410 (10%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKN-----KCMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
             I+   F  M+ L+ L+     N      C+ H L  +   +LR  +W  FP+    + 
Sbjct: 589 FNISEKAFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYIS-RKLRLLDWMYFPMTCFPSK 647

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E LV L M GSK+ +LW+++Q L +LKR+DL  SK L +LPDLS A NLE+L+L  C
Sbjct: 648 FNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLNGC 707

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           SSL E   SI    KL  L+L  C SL  LP+SI              N  NL  +   H
Sbjct: 708 SSLVELPFSIGNATKLLKLELSGCSSLLELPSSI-------------GNAINLQTIDFSH 754

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
             + +        ELPSSI   +N+ EL +  C  L+ + SSI     L+ + +  C +L
Sbjct: 755 CENLV--------ELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSL 806

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           +  E+PS   + T  K     EL L  C     LPS      +L  L +  C +   LP 
Sbjct: 807 K--ELPSSIGNCTNLK-----ELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPS 859

Query: 302 ELG---NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            +G   NL+ LN   +  + + ELP  +G L  LS+L L+ C +L+ + ++I  L+ +  
Sbjct: 860 FIGKATNLKILNLGYL--SCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NLEFLNE 916

Query: 359 IEISNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
           +++++C  LK FP     I   ++ G+ IE +PSS+    +   L+ L S
Sbjct: 917 LDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSLRSWPRLEDLQMLYS 966



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 41/319 (12%)

Query: 283 KSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
           ++L  +++    N + LPD     NL+ LN   ++G +++ ELP  +G    L KLEL  
Sbjct: 674 RNLKRMDLFSSKNLKELPDLSSATNLEVLN---LNGCSSLVELPFSIGNATKLLKLELSG 730

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
           CS L  + SSI    ++++I+ S+C NL    E+P    + + ++      L L+ CS L
Sbjct: 731 CSSLLELPSSIGNAINLQTIDFSHCENL---VELPSSIGNATNLKE-----LDLSCCSSL 782

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
           + LPSS+    +L  L +I C  L+ LP  +GN   L+EL                    
Sbjct: 783 KELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELH------------------- 823

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIRE 518
              L  CSS   LPS +  + +L  L +  C++ + LP  IG    LK+L +   + + E
Sbjct: 824 ---LTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVE 880

Query: 519 VPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
           +P  +G L  L  L L     LQ++P ++N L  L  L L++  L +    +   +++K 
Sbjct: 881 LPSFIGNLHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVIS--TNIKR 937

Query: 578 LDLFENNLDRIPEYLRSFP 596
           L L    ++ +P  LRS+P
Sbjct: 938 LHLRGTQIEEVPSSLRSWP 956



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 100/177 (56%), Gaps = 6/177 (3%)

Query: 387 PSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++LN   SKLE L   +   ++L  +++   K L+ LPD L +   LE L + G +
Sbjct: 650 PEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPD-LSSATNLEVLNLNGCS 708

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + E+P S+     L KL+L  CSS   LPS +  + +L +++   C+N + LP  IGN 
Sbjct: 709 SLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNA 768

Query: 504 EYLKVLTIK-GTAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLNQLSSLVSLKLS 558
             LK L +   ++++E+P S+G  ++L+ L ++  ++L+ +P S+   ++L  L L+
Sbjct: 769 TNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLT 825


>gi|359489072|ref|XP_002262840.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 671

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 230/506 (45%), Gaps = 95/506 (18%)

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           HLR  L L   GI+ELP SI  L ++  L +  C   E   +    ++ L+++ +     
Sbjct: 3   HLRE-LYLRKTGIKELPGSIGYLESLESLNLSGCSDFEKFPTIQGTMKCLKNLIL----- 56

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                      +GT  KE                LP+     KSL ++ + +   FE+ P
Sbjct: 57  -----------EGTAIKE----------------LPNNIGYLKSLETIYLTNSSKFEKFP 89

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           + LGN++ L  L ++ TAI+ELP  +G L  L  L L+N S ++ + +SI  LK++E + 
Sbjct: 90  EILGNMKCLKELYLENTAIKELPNSIGCLEALQNLSLQNTS-IKELPNSIGSLKALEVLF 148

Query: 361 ISNCSNLKGFPEI-----PFCNIDGSG--IERIPSSV--------LKLNKCSKLESLPSS 405
           + +CSNL+ FPEI        N+  SG  I+ +P S+        L L  C  L SLPSS
Sbjct: 149 VDDCSNLEKFPEIQRNMESLKNLSASGTAIKELPYSIRHLIGLSRLNLENCKNLRSLPSS 208

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
           +   K L +L +  C  LE   +   ++E    L + G GI E+P S+ +L         
Sbjct: 209 IHGLKYLENLALNGCSNLEAFSEIEVDVEHSRHLHLRGMGITELPSSIERL--------- 259

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLG 524
                         K L SLE+I+C+N   LP+ IGNL  L  L ++  + + ++P++L 
Sbjct: 260 --------------KGLKSLELINCENLETLPNSIGNLTCLSRLFVRNCSKLHKLPDNLR 305

Query: 525 QLSS-LEWLVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            L   L  L L+  NL    IP  L  LSSL SL +S N++  IP  +  LS L +L + 
Sbjct: 306 SLQCCLTELDLAGCNLMEGAIPSDLWCLSSLESLDVSENHIRCIPVGIIQLSKLIFLGMN 365

Query: 582 E----NNLDRIPEYLRSFPTSIPSEFTSLR------LSVDLRNCLKLDPNELSEIIKDGW 631
                  +  +P  LR           +L       L   L N  KLD   L +  +D +
Sbjct: 366 HCPKLEEISELPSSLRMIQAHGCPCLKALSCDPTDVLWFSLLNYFKLDTENL-KCERDFY 424

Query: 632 MKQSVNGETYITKSMYFPG-NEIPKW 656
                  +T+   S+  PG N IP+W
Sbjct: 425 -------KTHCNISVVIPGSNGIPEW 443



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 200/405 (49%), Gaps = 59/405 (14%)

Query: 144 RCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMT-SCHLRSTLPLLGVGIEELPSSIK 201
           R   +  LP SI + + L+ L L GCS+ +  P +  +      L L G  I+ELP++I 
Sbjct: 10  RKTGIKELPGSIGYLESLESLNLSGCSDFEKFPTIQGTMKCLKNLILEGTAIKELPNNIG 69

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQ-----FLESIRIHRCPN-LQFLE-MPSCNIDGT 254
            L ++  + + +  + E     +  ++     +LE+  I   PN +  LE + + ++  T
Sbjct: 70  YLKSLETIYLTNSSKFEKFPEILGNMKCLKELYLENTAIKELPNSIGCLEALQNLSLQNT 129

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
             KE P+S   LK                +L  L + DC N E+ P+   N+++L  L  
Sbjct: 130 SIKELPNSIGSLK----------------ALEVLFVDDCSNLEKFPEIQRNMESLKNLSA 173

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            GTAI+ELP  +  L  LS+L L+NC  L  + SSI  LK +E++ ++ CSNL+ F EI 
Sbjct: 174 SGTAIKELPYSIRHLIGLSRLNLENCKNLRSLPSSIHGLKYLENLALNGCSNLEAFSEIE 233

Query: 375 F-------CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
                    ++ G GI  +PSS+ +L                K L SLE+I+C+ LE LP
Sbjct: 234 VDVEHSRHLHLRGMGITELPSSIERL----------------KGLKSLELINCENLETLP 277

Query: 428 DELGNLEALEELRVEG-TGIREVPKSLA--QLALSKLKLKKCSSFE-SLPSRLYVSKSLT 483
           + +GNL  L  L V   + + ++P +L   Q  L++L L  C+  E ++PS L+   SL 
Sbjct: 278 NSIGNLTCLSRLFVRNCSKLHKLPDNLRSLQCCLTELDLAGCNLMEGAIPSDLWCLSSLE 337

Query: 484 SLEIIDCKNFMR-LPDEIGNLEYLKVLTI----KGTAIREVPESL 523
           SL++   +N +R +P  I  L  L  L +    K   I E+P SL
Sbjct: 338 SLDV--SENHIRCIPVGIIQLSKLIFLGMNHCPKLEEISELPSSL 380



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 50/366 (13%)

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY-------------------- 345
           ++ L  L +  T I+ELP  +G L  L  L L  CS+ E                     
Sbjct: 1   MRHLRELYLRKTGIKELPGSIGYLESLESLNLSGCSDFEKFPTIQGTMKCLKNLILEGTA 60

Query: 346 ---ISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV----- 390
              + ++I  LKS+E+I ++N S  + FPEI           ++ + I+ +P+S+     
Sbjct: 61  IKELPNNIGYLKSLETIYLTNSSKFEKFPEILGNMKCLKELYLENTAIKELPNSIGCLEA 120

Query: 391 ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
              L L   S ++ LP+S+   K+L  L + DC  LE+ P+   N+E+L+ L   GT I+
Sbjct: 121 LQNLSLQNTS-IKELPNSIGSLKALEVLFVDDCSNLEKFPEIQRNMESLKNLSASGTAIK 179

Query: 448 EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
           E+P S+  L  LS+L L+ C +  SLPS ++  K L +L +  C N     +   ++E+ 
Sbjct: 180 ELPYSIRHLIGLSRLNLENCKNLRSLPSSIHGLKYLENLALNGCSNLEAFSEIEVDVEHS 239

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLER 564
           + L ++G  I E+P S+ +L  L+ L L +  NL+ +P S+  L+ L  L + N + L +
Sbjct: 240 RHLHLRGMGITELPSSIERLKGLKSLELINCENLETLPNSIGNLTCLSRLFVRNCSKLHK 299

Query: 565 IPERLDPLS-SLKYLDLFENNL--DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPN 621
           +P+ L  L   L  LDL   NL    IP  L        S   SL +S +   C+ +   
Sbjct: 300 LPDNLRSLQCCLTELDLAGCNLMEGAIPSDLWCL-----SSLESLDVSENHIRCIPVGII 354

Query: 622 ELSEII 627
           +LS++I
Sbjct: 355 QLSKLI 360



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 37/299 (12%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD--LGYCS 122
           E L +L +  + + +L + + +L +L+ + +     L K P++   +N+E L       +
Sbjct: 119 EALQNLSLQNTSIKELPNSIGSLKALEVLFVDDCSNLEKFPEIQ--RNMESLKNLSASGT 176

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKM-TSC 180
           ++ E   SI++L  L  L+L+ CK+L SLP+SIH  KYL+ L L GCSNL+   ++    
Sbjct: 177 AIKELPYSIRHLIGLSRLNLENCKNLRSLPSSIHGLKYLENLALNGCSNLEAFSEIEVDV 236

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                L L G+GI ELPSSI+ L  +  L + +C+ LE + +SI  L  L  + +  C  
Sbjct: 237 EHSRHLHLRGMGITELPSSIERLKGLKSLELINCENLETLPNSIGNLTCLSRLFVRNCSK 296

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-RL 299
           L  L                           P++L S QC    LT L++  C   E  +
Sbjct: 297 LHKL---------------------------PDNLRSLQC---CLTELDLAGCNLMEGAI 326

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           P +L  L +L  L +    IR +P G+ QL+ L  L + +C +LE IS     L+ +++
Sbjct: 327 PSDLWCLSSLESLDVSENHIRCIPVGIIQLSKLIFLGMNHCPKLEEISELPSSLRMIQA 385



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)

Query: 37  SLEGVPFTELRYFEWHQFPLKTLNILHWENLVSL--KMPGSKVTQ--LWDDVQNLVSLKR 92
           S  G    EL Y   H   L  LN+ + +NL SL   + G K  +    +   NL +   
Sbjct: 172 SASGTAIKELPYSIRHLIGLSRLNLENCKNLRSLPSSIHGLKYLENLALNGCSNLEAFSE 231

Query: 93  IDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP 152
           I++          D+  +++L +  +G    +TE  SSI+ L  L+ L+L  C++L +LP
Sbjct: 232 IEV----------DVEHSRHLHLRGMG----ITELPSSIERLKGLKSLELINCENLETLP 277

Query: 153 TSIHS-KYLKRLVLRGCSNLKNLP---KMTSCHLRSTLPLLGVGIEE--LPSSIKCLSNI 206
            SI +   L RL +R CS L  LP   +   C L + L L G  + E  +PS + CLS++
Sbjct: 278 NSIGNLTCLSRLFVRNCSKLHKLPDNLRSLQCCL-TELDLAGCNLMEGAIPSDLWCLSSL 336

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
            E L  S   +  I   I +L  L  + ++ CP L+ + E+PS
Sbjct: 337 -ESLDVSENHIRCIPVGIIQLSKLIFLGMNHCPKLEEISELPS 378


>gi|224133158|ref|XP_002321497.1| predicted protein [Populus trichocarpa]
 gi|222868493|gb|EEF05624.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 188/717 (26%), Positives = 301/717 (41%), Gaps = 153/717 (21%)

Query: 18  MTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL---NILHWENLVSLKMPG 74
           M  LRLL+   +K   +    +  P   L++ +W   P+K L     LH   L  L +  
Sbjct: 11  MVNLRLLQINHAK---LQGKFKNFP-AGLKWLQWKNCPMKNLPSDYALH--ELAVLDLSE 64

Query: 75  SKVTQLWDDVQNLVS--LKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
           S++ ++W    N V+  L  +DL     L   PDLS  +NLE L+L  C  LT+ H S+ 
Sbjct: 65  SRIERVWGWTSNKVAKNLMVMDLHGCYNLVACPDLSGCKNLEKLNLEGCIRLTKVHKSVG 124

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
               L  L+L+ C +L   P+ +             S LK L    S             
Sbjct: 125 NARTLLQLNLNDCSNLVEFPSDV-------------SGLKELSLNQS------------A 159

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +EELP S+  LSN+ +L +  C+ L  I  S+  LQ L  + I+R               
Sbjct: 160 VEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSINR--------------- 204

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
            +  KE P         P   SLP        L +L    C +  +LPD +G L +++ L
Sbjct: 205 -SAIKELP---------PAIGSLP-------YLKTLLAGGCGSLSKLPDSIGGLASISEL 247

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            +D T+I  LPE +G L ++ KL ++ C+ L  +  SI  + S+ ++++           
Sbjct: 248 ELDETSISHLPEQIGGLKMIEKLYMRKCTSLRSLPESIGSMLSLTTLDLFG--------- 298

Query: 373 IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
                                   S +  LP SL M ++L  L +  C+KL++LP  +G 
Sbjct: 299 ------------------------SNIIELPESLGMLENLVMLRLHQCRKLQKLPVSIGK 334

Query: 433 LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           L++L  L +E T +  +P+S  +L+ L  LK++K    ES  ++               +
Sbjct: 335 LKSLCHLLMEKTAVTVLPESFGKLSNLMILKMRK-EPLESPSTQ---------------E 378

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
             + LP     L  L+ L  +   I  ++P+   +LSSLE L L  NN   +P SL  LS
Sbjct: 379 QLVVLPSSFFELSLLEELNARAWRISGKIPDDFEKLSSLEILDLGHNNFSSLPSSLCGLS 438

Query: 551 SLVSLKLSN-NNLERIPERLDPL-SSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL 608
            L  L L +   LE +P    PL SSL+ +D        +         S  S   SL L
Sbjct: 439 LLRELHLPHCEELESLP----PLPSSLEEVD--------VSNCFALETMSDVSNLGSLTL 486

Query: 609 SVDLRNCLK---LDPNELSEIIKDGWMKQ----SVNGETYITK-------SMYFPGNEIP 654
            +++ NC K   +   E  + +K  +M      S+  +  ++K       ++  PG++IP
Sbjct: 487 -LNMTNCEKVVDIPGIECLKSLKRLYMSNCKACSLKVKRRLSKVCLRNIRNLSMPGSKIP 545

Query: 655 KWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFD 711
            WF  +         + +     K +     V + C + E  R+  V  D + NL D
Sbjct: 546 DWFSQEDVKF-----SERRNREIKAVIIGVVVSLDCQIPEHLRYFPVVPDIQVNLLD 597


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 214/419 (51%), Gaps = 38/419 (9%)

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKR------LENISSSIFKLQFLESIR 234
           RSTL L G+GI+ELP  I  L+ +  L++  +  +R      L+ +   I +L  L S+ 
Sbjct: 18  RSTLDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLF 77

Query: 235 IHRCPNLQFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           +      QF E+P     +   RS    S++L         +LP      +SLTSL  + 
Sbjct: 78  LAYN---QFEEIPEVVGRLRKLRSLNLSSNQLS--------TLPEVVGQLQSLTSL-YLR 125

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
                 LP+ +G LQ+L  L +    +  LPE +GQ +L S L L+  ++L  +   + +
Sbjct: 126 SNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTS-LNLR-SNQLSTLPEVVGQ 183

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L+S+ S+++S  + L   PE+         ++ + S  L  N+ S   +LP  +   +SL
Sbjct: 184 LQSLTSLDLS-SNQLSTLPEVV------GQLQSLTSLDLSFNQLS---TLPEVVGQLQSL 233

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFES 471
           TSL +    +L  LP+ +G L++L  L +    +  +P+ + QL +L+ L L+  +   +
Sbjct: 234 TSLNL-SSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLR-SNQLST 291

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           LP  +   +SLTSL++        LP+ +G L+ L  L ++   +  +PE +GQL SL  
Sbjct: 292 LPEAVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTS 350

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           L LS N L  +PE++ QL SL SL LS+N L  +PE +  L SL  LDL  N L  +PE
Sbjct: 351 LYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPE 409



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 278/608 (45%), Gaps = 61/608 (10%)

Query: 21  LRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQL 80
           LRL+    +  +  +  L G+   EL         LKTL +  W+     +  G+ +  L
Sbjct: 7   LRLIDEAAADGRSTLD-LAGMGIDELPPEIGKLTKLKTLVLGLWDK--QRRRRGNNLQTL 63

Query: 81  WDDVQNLVSLKRIDLKYSKL---------LTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
            D++  L  L+ + L Y++          L KL  L+L+ N         S+L E    +
Sbjct: 64  PDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSN-------QLSTLPEVVGQL 116

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
           Q L  L +    R   L++LP  +   + L  L L   + L  LP++      ++L L  
Sbjct: 117 QSLTSLYL----RSNQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQQSLTSLNLRS 171

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCPNL--QF 243
             +  LP  +  L ++  L + S  +L  +   + +LQ L S+     ++   P +  Q 
Sbjct: 172 NQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQL 230

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLEIIDCPNF 296
             + S N+   +    P    +L+     +       +LP      +SLTSL  +     
Sbjct: 231 QSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL-YLRSNQL 289

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
             LP+ +G LQ+L  L +    +  LPE +GQL  L+ L L+  ++L  +   + +L+S+
Sbjct: 290 STLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLR-SNQLSTLPEVVGQLQSL 348

Query: 357 ESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SL 402
            S+ +S  + L   PE       +   N+  + +  +P  V +L   + L+       +L
Sbjct: 349 TSLYLS-SNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTL 407

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKL 461
           P  +   +SLTSL  +   +L  LP+ +G L++L  L +    +  +P+ + QL +L+ L
Sbjct: 408 PEVVGQLQSLTSL-YLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 466

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
            L+  +   +LP  +   +SLTSL++        LP+ +G L+ L  L ++   +  +PE
Sbjct: 467 NLR-SNQLSTLPEAVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPE 524

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            +GQL SL  L LS N L  +PE + QL SL SL L +N L  +PE +  L SL  LDL 
Sbjct: 525 VVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLS 584

Query: 582 ENNLDRIP 589
           +N L  +P
Sbjct: 585 DNQLSELP 592



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 231/474 (48%), Gaps = 41/474 (8%)

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSN 205
           LT L T +   + K+   RG +NL+ LP        LRS L L     EE+P  +  L  
Sbjct: 38  LTKLKTLVLGLWDKQRRRRG-NNLQTLPDEIGRLTELRS-LFLAYNQFEEIPEVVGRLRK 95

Query: 206 IGELLIYSCKRLENISSSIFKLQ-----FLESIRIHRCPNL--QFLEMPSCNIDGTR--- 255
           +  L + S  +L  +   + +LQ     +L S ++   P +  Q   + S ++   +   
Sbjct: 96  LRSLNL-SSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLST 154

Query: 256 ----SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                 +Q  + L L+   +  +LP      +SLTSL++        LP+ +G LQ+L  
Sbjct: 155 LPEVVGQQSLTSLNLRSN-QLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTS 212

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L +    +  LPE +GQL  L+ L L + ++L  +   + +L+S+ S+++S  + L   P
Sbjct: 213 LDLSFNQLSTLPEVVGQLQSLTSLNL-SSNQLSTLPEVVGQLQSLTSLDLS-SNQLSTLP 270

Query: 372 EI-------PFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEI 417
           E+           +  + +  +P +V +L   + L+       +LP  +   +SLTSL +
Sbjct: 271 EVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNL 330

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
               +L  LP+ +G L++L  L +    +  +P+++ QL +L+ L L   +   +LP  +
Sbjct: 331 -RSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLS-SNQLSTLPEVV 388

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              +SLTSL++        LP+ +G L+ L  L ++   +  +PE++GQL SL  L LS 
Sbjct: 389 GQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSS 447

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           N L  +PE + QL SL SL L +N L  +PE +  L SL  LDL  N L  +PE
Sbjct: 448 NQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPE 501



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 170/621 (27%), Positives = 290/621 (46%), Gaps = 60/621 (9%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVP-----FTELRYFEWHQFPLKTLN-- 60
           +Q  P    ++TELR L           +  E +P       +LR        L TL   
Sbjct: 60  LQTLPDEIGRLTELRSLFLA-------YNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEV 112

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL-- 118
           +   ++L SL +  ++++ L + V  L SL  +DL  ++L T LP++   Q+L  L+L  
Sbjct: 113 VGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLST-LPEVVGQQSLTSLNLRS 171

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKM 177
              S+L E    +Q L  L++        L++LP  +   + L  L L   + L  LP++
Sbjct: 172 NQLSTLPEVVGQLQSLTSLDL----SSNQLSTLPEVVGQLQSLTSLDL-SFNQLSTLPEV 226

Query: 178 TSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
               L+S  +L L    +  LP  +  L ++  L + S  +L  +   + +LQ L S+ +
Sbjct: 227 VG-QLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLYL 284

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
            R   L  L      +    S +  S++L         +LP      +SLTSL +     
Sbjct: 285 -RSNQLSTLPEAVGQLQSLTSLDLSSNQLS--------TLPEVVGQLQSLTSLNL-RSNQ 334

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              LP+ +G LQ+L  L +    +  LPE +GQL  L+ L L + ++L  +   + +L+S
Sbjct: 335 LSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNL-SSNQLSTLPEVVGQLQS 393

Query: 356 VESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSVLKLNKCSKLE-------S 401
           + S+++S  + L   PE+           +  + +  +P +V +L   + L+       +
Sbjct: 394 LTSLDLS-SNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLST 452

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSK 460
           LP  +   +SLTSL +    +L  LP+ +G L++L  L +    +  +P+ + QL +L+ 
Sbjct: 453 LPEVVGQLQSLTSLNL-RSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTS 511

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L+  +   +LP  +   +SLTSL++        LP+ +G L+ L  L ++   +  +P
Sbjct: 512 LDLR-SNQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP 569

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           E +GQL SL  L LSDN L  +P  + QL +L SL L  N LE++P  L  L  L+ L L
Sbjct: 570 EVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSL 629

Query: 581 FENNLDRIPEY---LRSFPTS 598
              +L     Y   LR+F  S
Sbjct: 630 GSASLIFDSYYHNVLRAFGAS 650



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 268/580 (46%), Gaps = 76/580 (13%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL-SLAQNLEILDLG 119
           ++  ++L SL +  ++++ L + V  L SL  +DL  ++L T LP++    Q+L  LDL 
Sbjct: 158 VVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLST-LPEVVGQLQSLTSLDLS 216

Query: 120 Y--CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
           +   S+L E    +Q L  L +        L++LP  +   + L  L L   + L  LP+
Sbjct: 217 FNQLSTLPEVVGQLQSLTSLNL----SSNQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPE 271

Query: 177 -------MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
                  +TS +LRS        +  LP ++  L ++  L + S  +L  +   + +LQ 
Sbjct: 272 VVGQLQSLTSLYLRSN------QLSTLPEAVGQLQSLTSLDL-SSNQLSTLPEVVGQLQS 324

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L S+ + R   L  L      +    S    S++L         +LP      +SLTSL 
Sbjct: 325 LTSLNL-RSNQLSTLPEVVGQLQSLTSLYLSSNQLS--------TLPEAVGQLQSLTSLN 375

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +        LP+ +G LQ+L  L +    +  LPE +GQL  L+ L L+  ++L  +  +
Sbjct: 376 L-SSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLR-SNQLSTLPEA 433

Query: 350 IFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSVLKLNKCSKLE-- 400
           + +L+S+ S+++S  + L   PE+          N+  + +  +P +V +L   + L+  
Sbjct: 434 VGQLQSLTSLDLS-SNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLS 492

Query: 401 -----SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                +LP  +   +SLTSL++    +L  LP+ +G L++L  L +    +  +P+ + Q
Sbjct: 493 SNQLSTLPEVVGQLQSLTSLDL-RSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQ 551

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L+ L L+  +   +LP  +   +SLTSL++ D +    LP +I  L+ L  L + G 
Sbjct: 552 LQSLTSLYLR-SNQLSTLPEVIGQLQSLTSLDLSDNQ-LSELPRQICQLDTLCSLFLGGN 609

Query: 515 AIREVPESLGQLSSLEWLVLSD----------------------NNLQIIPESLNQLSSL 552
            + ++P  L +L  LE L L                        N L  I + L  L SL
Sbjct: 610 FLEQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLPSL 669

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
             L LS N L R+  ++  L  LK +DL  N L   PE L
Sbjct: 670 EVLDLSFNQLSRVDSKIQSLEKLKQIDLRGNPLPIPPEIL 709


>gi|147858878|emb|CAN82897.1| hypothetical protein VITISV_026993 [Vitis vinifera]
          Length = 607

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 159/303 (52%), Gaps = 15/303 (4%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILH 63
           E++     F+KMT+LRLL+    + +C VH  +   F   ELRY  W  +PLK L +  +
Sbjct: 51  EVRFTTAAFAKMTKLRLLRITAPQMQCEVHISDDFKFHYDELRYLFWDYYPLKLLPSDFN 110

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            +NLV L MP S +TQLW+  +   +LK +DL++SK LT+ PD S   NL  L L  C+ 
Sbjct: 111 SKNLVWLCMPHSHLTQLWEGNKVFENLKYMDLRHSKYLTETPDFSSVTNLNSLILDGCTQ 170

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L + H S+  L+KL  L L+ C +L   P       L+ L+L GCS L+    ++  H+ 
Sbjct: 171 LCKIHPSLGDLDKLTWLSLENCINLEHFPGISQLVSLETLILSGCSKLEKFLDISQ-HMP 229

Query: 184 --STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I ELPSSI   + +  L + +C++L ++ SSI KL  L  + +  C +L
Sbjct: 230 CLRQLYLDGTAITELPSSIDYATKLEILDLRNCRKLRSLPSSICKLTLLWCLSLSGCSDL 289

Query: 242 QFLEMPSCNID---GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
              E+ S N+D   GT  +      L L+ C    +LP+        +SL I++  N E 
Sbjct: 290 GKCEVNSGNLDALPGTLDQLCSLKMLFLQNCWSLRALPALP------SSLVILNASNCES 343

Query: 299 LPD 301
           L D
Sbjct: 344 LED 346



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 51/326 (15%)

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKK 465
           +F++L  +++   K L   PD   ++  L  L ++G T + ++  SL  L  L+ L L+ 
Sbjct: 133 VFENLKYMDLRHSKYLTETPD-FSSVTNLNSLILDGCTQLCKIHPSLGDLDKLTWLSLEN 191

Query: 466 CSSFESLPSRLYVSK--SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           C + E  P    +S+  SL +L +  C    +  D   ++  L+ L + GTAI E+P S+
Sbjct: 192 CINLEHFPG---ISQLVSLETLILSGCSKLEKFLDISQHMPCLRQLYLDGTAITELPSSI 248

Query: 524 GQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS-----------NNNLERIPERLDP 571
              + LE L L +   L+ +P S+ +L+ L  L LS           + NL+ +P  LD 
Sbjct: 249 DYATKLEILDLRNCRKLRSLPSSICKLTLLWCLSLSGCSDLGKCEVNSGNLDALPGTLDQ 308

Query: 572 LSSLKYLDLFENNLDRIPEYLRSFPTSI---------------PSEFTSLRLSVDLRNCL 616
           L SLK L  F  N   +   L + P+S+               P    SL      RNC 
Sbjct: 309 LCSLKML--FLQNCWSL-RALPALPSSLVILNASNCESLEDISPQSVFSLCRGSIFRNCS 365

Query: 617 KLDPNE----------LSEIIKDGWMK--QSVNGETYITKSMYFPGNEIPKWFRHQST-G 663
           KL   +           +++ ++ W    +  N E  +  S  FPG+ IP WF+H+S   
Sbjct: 366 KLTKFQSRMERDLQSMAAKVDQEKWRSTFEEQNSEVDVQFSTVFPGSGIPDWFKHRSKRW 425

Query: 664 STISLKTPQPTGYNKLMGFAFCVVVA 689
             I +K       +  +GFA C VVA
Sbjct: 426 RKIDMKVSPNWYTSNFLGFALCAVVA 451



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 32/217 (14%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
           L  G  +F++L  +++         PD   ++  LN LI+DG T + ++   LG L  L+
Sbjct: 127 LWEGNKVFENLKYMDLRHSKYLTETPD-FSSVTNLNSLILDGCTQLCKIHPSLGDLDKLT 185

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF-------PEIPFCNIDGSGIERI 386
            L L+NC  LE+    I +L S+E++ +S CS L+ F       P +    +DG+ I  +
Sbjct: 186 WLSLENCINLEHFPG-ISQLVSLETLILSGCSKLEKFLDISQHMPCLRQLYLDGTAITEL 244

Query: 387 PSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           PSS+        L L  C KL SLPSS+C    L  L +  C  L +     GNL+AL  
Sbjct: 245 PSSIDYATKLEILDLRNCRKLRSLPSSICKLTLLWCLSLSGCSDLGKCEVNSGNLDAL-- 302

Query: 439 LRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
                      P +L QL +L  L L+ C S  +LP+
Sbjct: 303 -----------PGTLDQLCSLKMLFLQNCWSLRALPA 328



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 18/171 (10%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   E  P G     SL +L +  C   E+  D   ++  L +L +DGTAI ELP
Sbjct: 187 LSLENCINLEHFP-GISQLVSLETLILSGCSKLEKFLDISQHMPCLRQLYLDGTAITELP 245

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +     L  L+L+NC +L  + SSI KL  +  + +S CS+L        C ++   +
Sbjct: 246 SSIDYATKLEILDLRNCRKLRSLPSSICKLTLLWCLSLSGCSDLGK------CEVNSGNL 299

Query: 384 ERIPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           + +P +        +L L  C  L +LP+   +  SL  L   +C+ LE +
Sbjct: 300 DALPGTLDQLCSLKMLFLQNCWSLRALPA---LPSSLVILNASNCESLEDI 347


>gi|168049210|ref|XP_001777057.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671622|gb|EDQ58171.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 559

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 244/535 (45%), Gaps = 32/535 (5%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKL-PDLSLAQNLEILDLGYCSSLTETHSSIQY 133
           S++T L  ++ N+ +L    +   K +T L  +L+   +L   D+ +C  L    + +  
Sbjct: 10  SRLTSLPKELDNVTTLTTFAISECKNMTLLLKELNNLTSLTTFDISWCKKLISLPNELGN 69

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L   D+  CK LTSLP  + +   L    +R C NL + PK    +L S        
Sbjct: 70  LTSLTTFDISWCKKLTSLPKELGNLTSLTTFDIRWCENLTSFPKKLG-NLTSLTTFDMSY 128

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI---RIHRCPNLQFLEMPSC 249
            + L S  K L N+  L I+   R EN++S   KL  L S+    I  C NL  L     
Sbjct: 129 CKNLISLPKELGNLISLTIFDMSRCENLTSLPNKLGNLTSLITFDISYCKNLISLPNKLG 188

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           N+    +         +  C     LP+      SLT+ +II C N   LP EL NL +L
Sbjct: 189 NLKSLIT-------FDINYCENLTLLPNELGNLTSLTTFDIIRCENLTSLPKELSNLTSL 241

Query: 310 NRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
               ++    +  LP+ LG L  L+  ++  C +L  +   I  L S+ + ++S C NL 
Sbjct: 242 TIFNMNYCKNLTSLPKELGNLKSLTIFDIIWCKKLISLPKEISNLISLTTFDMSKCENLI 301

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNK--CSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
             P+    N+         +S+   N   C  L SLP  L    SLT+ +I  CKKL  L
Sbjct: 302 SLPQ-ELGNL---------TSLTTFNNQWCKNLTSLPKELGNLISLTTFDISWCKKLTIL 351

Query: 427 PDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           P ELGNL +L    +     +  +PK L  L +L+   ++ C +   LP  L    SL++
Sbjct: 352 PKELGNLTSLTTFDINKCVNLTSLPKELGNLTSLTTFNIQYCKNLILLPKELSNLTSLST 411

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQII 542
            +I   K    L  E+ NL  L +  I+    +  +P+ +G L+SL    +S   NL  +
Sbjct: 412 FDISWYKKLTSLSKELDNLTSLTIFNIQWCENLTSLPKEIGNLTSLTTFDVSKCKNLTSL 471

Query: 543 PESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSF 595
           P+ L+ L +L +  +S+  NL  +   LD L+SL   ++ + +NL  +P+ L + 
Sbjct: 472 PQELDNLITLTTFYISDCENLTSLLNELDNLTSLTIFNIQWCDNLTSLPKELNNL 526



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 223/507 (43%), Gaps = 44/507 (8%)

Query: 137 LEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSN-------LKNLPKMTSCHLRSTLPL 188
           ++   ++ C  LTSLP  + +   L    +  C N       L NL  +T+  +     L
Sbjct: 1   MQWFSIEGCSRLTSLPKELDNVTTLTTFAISECKNMTLLLKELNNLTSLTTFDISWCKKL 60

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           +      LP+ +  L+++    I  CK+L ++   +  L  L +  I  C NL       
Sbjct: 61  IS-----LPNELGNLTSLTTFDISWCKKLTSLPKELGNLTSLTTFDIRWCENLTSFPKKL 115

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
            N+    +         +  C    SLP       SLT  ++  C N   LP++LGNL +
Sbjct: 116 GNLTSLTT-------FDMSYCKNLISLPKELGNLISLTIFDMSRCENLTSLPNKLGNLTS 168

Query: 309 LNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           L    I     +  LP  LG L  L   ++  C  L  + + +  L S+ + +I  C NL
Sbjct: 169 LITFDISYCKNLISLPNKLGNLKSLITFDINYCENLTLLPNELGNLTSLTTFDIIRCENL 228

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
              P+      + S +  +  ++  +N C  L SLP  L   KSLT  +II CKKL  LP
Sbjct: 229 TSLPK------ELSNLTSL--TIFNMNYCKNLTSLPKELGNLKSLTIFDIIWCKKLISLP 280

Query: 428 DELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            E+ NL +L    +     +  +P+ L  L +L+    + C +  SLP  L    SLT+ 
Sbjct: 281 KEISNLISLTTFDMSKCENLISLPQELGNLTSLTTFNNQWCKNLTSLPKELGNLISLTTF 340

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
           +I  CK    LP E+GNL  L    I K   +  +P+ LG L+SL    +    NL ++P
Sbjct: 341 DISWCKKLTILPKELGNLTSLTTFDINKCVNLTSLPKELGNLTSLTTFNIQYCKNLILLP 400

Query: 544 ESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSE 602
           + L+ L+SL +  +S    L  + + LD L+SL   ++      +  E L S P  I   
Sbjct: 401 KELSNLTSLSTFDISWYKKLTSLSKELDNLTSLTIFNI------QWCENLTSLPKEI-GN 453

Query: 603 FTSLRLSVDLRNCLKLD--PNELSEII 627
            TSL  + D+  C  L   P EL  +I
Sbjct: 454 LTSLT-TFDVSKCKNLTSLPQELDNLI 479



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 189/451 (41%), Gaps = 32/451 (7%)

Query: 86  NLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
           NL SL   D+ Y K L  LP +L    +L I D+  C +LT   + +  L  L   D+  
Sbjct: 117 NLTSLTTFDMSYCKNLISLPKELGNLISLTIFDMSRCENLTSLPNKLGNLTSLITFDISY 176

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
           CK+L SLP  + + K L    +  C NL  LP     +L S      +  E L S  K L
Sbjct: 177 CKNLISLPNKLGNLKSLITFDINYCENLTLLPNELG-NLTSLTTFDIIRCENLTSLPKEL 235

Query: 204 SNIGELLIYS---CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQP 260
           SN+  L I++   CK L ++   +  L+ L    I  C  L  L     N+    +    
Sbjct: 236 SNLTSLTIFNMNYCKNLTSLPKELGNLKSLTIFDIIWCKKLISLPKEISNLISLTT---- 291

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAI 319
                + KC    SLP       SLT+     C N   LP ELGNL +L    I     +
Sbjct: 292 ---FDMSKCENLISLPQELGNLTSLTTFNNQWCKNLTSLPKELGNLISLTTFDISWCKKL 348

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IP 374
             LP+ LG L  L+  ++  C  L  +   +  L S+ +  I  C NL   P+       
Sbjct: 349 TILPKELGNLTSLTTFDINKCVNLTSLPKELGNLTSLTTFNIQYCKNLILLPKELSNLTS 408

Query: 375 FCNIDGSGIERIPS-----------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
               D S  +++ S           ++  +  C  L SLP  +    SLT+ ++  CK L
Sbjct: 409 LSTFDISWYKKLTSLSKELDNLTSLTIFNIQWCENLTSLPKEIGNLTSLTTFDVSKCKNL 468

Query: 424 ERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKS 481
             LP EL NL  L    + +   +  +   L  L +L+   ++ C +  SLP  L    S
Sbjct: 469 TSLPQELDNLITLTTFYISDCENLTSLLNELDNLTSLTIFNIQWCDNLTSLPKELNNLIS 528

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           LT+  I  C+N + LP E  NL  L    I+
Sbjct: 529 LTTFNIQWCENLISLPKEFRNLTSLTTFNIQ 559



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 38/190 (20%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLE 114
           L T NI + +NL+ L            ++ NL SL   D+ + K LT L  +L    +L 
Sbjct: 385 LTTFNIQYCKNLILLP----------KELSNLTSLSTFDISWYKKLTSLSKELDNLTSLT 434

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
           I ++ +C +LT     I  L  L   D+ +CK+LTSLP                  L NL
Sbjct: 435 IFNIQWCENLTSLPKEIGNLTSLTTFDVSKCKNLTSLP----------------QELDNL 478

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS---SIFKLQFLE 231
             +T+ ++           E L S +  L N+  L I++ +  +N++S    +  L  L 
Sbjct: 479 ITLTTFYIS--------DCENLTSLLNELDNLTSLTIFNIQWCDNLTSLPKELNNLISLT 530

Query: 232 SIRIHRCPNL 241
           +  I  C NL
Sbjct: 531 TFNIQWCENL 540


>gi|227438247|gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 162/303 (53%), Gaps = 17/303 (5%)

Query: 11  NPYTFSKMTELRLLKFCGSK-----NKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
           +P  F KM  LRLLKF  S+        +   LE +P T+LR   W  +P+ +L      
Sbjct: 630 SPNVFDKMCNLRLLKFYFSELIENHGVSLPQGLEYLP-TKLRLLHWEYYPISSLPQCFDP 688

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL+ L MP S V +LW   ++L +LK++ L YS  LTKLP L+ AQNLE+LDL  C SL
Sbjct: 689 KNLIELNMPNSCVKKLWKGKKSLENLKKMRLSYSSQLTKLPRLTSAQNLELLDLEGCKSL 748

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                SI YL KL  L+L  C +L S+P++   + L+ L L GCS L+N P+++      
Sbjct: 749 ESISHSICYLKKLVSLNLKDCSNLESVPSTSDLESLEVLNLSGCSKLENFPEISPN--VK 806

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G  I E+PSSIK L  + +L + + + L  + +S+ KL+ LE++ +  C +L++ 
Sbjct: 807 ELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSGCSSLEYF 866

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
              S  +   +S +   + ++         LPS      +L  +  + C +  RLPD   
Sbjct: 867 PDFSRKMKCLKSLDLSRTAIR--------ELPSSISYLIALEEVRFVGCKSLVRLPDNAW 918

Query: 305 NLQ 307
           +L+
Sbjct: 919 SLR 921



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 19/251 (7%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
           L  G+   ++L  + +       +LP  L + Q L  L ++G  ++  +   +  L  L 
Sbjct: 704 LWKGKKSLENLKKMRLSYSSQLTKLP-RLTSAQNLELLDLEGCKSLESISHSICYLKKLV 762

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-PFCN---IDGSGIERIPSS 389
            L LK+CS LE + S+   L+S+E + +S CS L+ FPEI P      + G+ I  IPSS
Sbjct: 763 SLNLKDCSNLESVPSTS-DLESLEVLNLSGCSKLENFPEISPNVKELYLGGTMIREIPSS 821

Query: 390 V--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           +        L L     L  LP+S+C  K L +L +  C  LE  PD    ++ L+ L +
Sbjct: 822 IKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSGCSSLEYFPDFSRKMKCLKSLDL 881

Query: 442 EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             T IRE+P S++ L AL +++   C S   LP   +  +       ID + F +L    
Sbjct: 882 SRTAIRELPSSISYLIALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTEKFSKL---W 938

Query: 501 GNLEYLKVLTI 511
             L++LK + I
Sbjct: 939 NRLDWLKKVHI 949



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 29/197 (14%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALN----------- 310
           L L+ C   ES+    C  K L SL + DC N E +P   +L +L+ LN           
Sbjct: 740 LDLEGCKSLESISHSICYLKKLVSLNLKDCSNLESVPSTSDLESLEVLNLSGCSKLENFP 799

Query: 311 -------RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
                   L + GT IRE+P  +  L LL KL+L+N   L  + +S+ KLK +E++ +S 
Sbjct: 800 EISPNVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSG 859

Query: 364 CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           CS+L+ FP+          ++ + S  L L++ + +  LPSS+    +L  +  + CK L
Sbjct: 860 CSSLEYFPDF------SRKMKCLKS--LDLSRTA-IRELPSSISYLIALEEVRFVGCKSL 910

Query: 424 ERLPDELGNLEALEELR 440
            RLPD   +L    E R
Sbjct: 911 VRLPDNAWSLRFKVEFR 927



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 21/162 (12%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEAL----------- 436
           +L L  C  LES+  S+C  K L SL + DC  LE +P   +L +LE L           
Sbjct: 739 LLDLEGCKSLESISHSICYLKKLVSLNLKDCSNLESVPSTSDLESLEVLNLSGCSKLENF 798

Query: 437 -------EELRVEGTGIREVPKSLAQLAL-SKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
                  +EL + GT IRE+P S+  L L  KL L+       LP+ +   K L +L + 
Sbjct: 799 PEISPNVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLS 858

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
            C +    PD    ++ LK L +  TAIRE+P S+  L +LE
Sbjct: 859 GCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALE 900


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 177/374 (47%), Gaps = 75/374 (20%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+  +   F++M  LR+L+F   K    +  L       LR   WH++PLK+L +  H +
Sbjct: 550 ELHFSAGAFTEMNRLRVLRFYNVKMNGNLKFLS----NNLRSLYWHEYPLKSLPSNFHPK 605

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S++ QLW   ++   LK I L +S+ LT+ PD S A NLE L L  C+S+ 
Sbjct: 606 KLVELNMCSSRLEQLWKGDKSFEKLKFIKLSHSQYLTRTPDFSGAPNLERLILEGCTSMV 665

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST 185
           + H SI  L KL  L+L+ CK+L S  +SIH   L+ L L GCS LK  P+M   +++S 
Sbjct: 666 KVHPSIGALQKLIFLNLEGCKNLKSFASSIHMNSLQILTLSGCSKLKKFPEMLE-NMKSL 724

Query: 186 LPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             LL     + ELPSSI  L+ +  L + +CK+L ++  S+ KL            +LQ 
Sbjct: 725 RQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLT-----------SLQI 773

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           L +  C+              +LKK P                              DEL
Sbjct: 774 LTLAGCS--------------ELKKLP------------------------------DEL 789

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS------------SIF 351
           G+L+ L  L  DG+ I+E+P  +  L  L  L L  C +   + S            S+ 
Sbjct: 790 GSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWSSPTVCLQLRSLL 849

Query: 352 KLKSVESIEISNCS 365
            L SV+++ +S+C+
Sbjct: 850 NLSSVKTLSLSDCN 863



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 200/480 (41%), Gaps = 105/480 (21%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C  L+S  SS+ M  SL  L +  C KL++ P+ L N+++L +L ++ T +RE+P
Sbjct: 680  LNLEGCKNLKSFASSIHM-NSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETALRELP 738

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+ +L  L  L L  C    SLP  L    SL  L +  C    +LPDE+G+L  L  L
Sbjct: 739  SSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNL 798

Query: 510  TIKGTAIREVPESLGQLSSLEWLVL-------------SDNNLQIIPESLNQLSSLVSLK 556
               G+ I+EVP S+  L++L+ L L             S   + +   SL  LSS+ +L 
Sbjct: 799  NADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLS 858

Query: 557  LSN-------------------------NNLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
            LS+                         NN   IP  L+ LS L YL L    +L  +PE
Sbjct: 859  LSDCNLSEGALPSDLSSLSSLESLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPE 918

Query: 591  Y--------------LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
                           L +F  S  +     +L+    +C +L  NE S+ +  G + Q +
Sbjct: 919  LPSTIQKVYADHCPSLETFSLSACASRKLNQLNFTFSDCFRLVENEHSDTV--GAILQGI 976

Query: 637  NGETYITK---------------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLM 680
               + I K                +  PG+ IP+WF HQ+ GS+++++ P P  YN KLM
Sbjct: 977  QLASSIPKFVDANKGSPVPYNDFHVIVPGSSIPEWFIHQNMGSSVTVELP-PHWYNAKLM 1035

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
            G A C V               D            R    YDSY    L   S ++ DHV
Sbjct: 1036 GLAVCAVFHA------------DPIDWGYLQYSLYRGEHKYDSYM---LQTWSPMKGDHV 1080

Query: 741  FLG---------SSIFAGENSCKRSDEFFFHIDRSC-------CEVKKCGIHFVHAQRQR 784
            + G           ++ GE S      F  H  +SC         VKKCG+   + Q  +
Sbjct: 1081 WFGYQSLVGQEDDRMWFGERSGTLKILFSGHCIKSCIVCVQPEVVVKKCGVRLAYEQGDK 1140



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 38/217 (17%)

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEI 290
            PNL+ L +  C    +  K  PS         L L+ C   +S  S   M  SL  L +
Sbjct: 650 APNLERLILEGCT---SMVKVHPSIGALQKLIFLNLEGCKNLKSFASSIHM-NSLQILTL 705

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   ++ P+ L N+++L +L++D TA+RELP  +G+L  L  L L NC +L  +  S+
Sbjct: 706 SGCSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSL 765

Query: 351 FKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS--------VLKLNK 395
            KL S++ + ++ CS LK  P+       +   N DGSGI+ +P S        VL L  
Sbjct: 766 CKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAG 825

Query: 396 CSK------LESLPS------SLCMFKSLTSLEIIDC 420
           C K      L S P+      SL    S+ +L + DC
Sbjct: 826 CKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDC 862


>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1108

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 135/236 (57%), Gaps = 9/236 (3%)

Query: 8   IQINPYTFSKMTELRLLK-FC-GSKNKCMV---HSLEGVPFTELRYFEWHQFPLKTL-NI 61
            +++P  F KM  LRLLK +C  S N C V     L  +P  ELR   W ++PL +L   
Sbjct: 742 FELSPTAFEKMYRLRLLKLYCPTSDNSCKVSLPQGLYSLP-DELRLLHWERYPLGSLPRN 800

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + +N+V L MP S +T+LW   +NL  LKRI L +S+ LTK P LS A+NLE +DL  C
Sbjct: 801 FNPKNIVELNMPYSNMTKLWKGTKNLEKLKRIILSHSRQLTKFPSLSKAKNLEHIDLEGC 860

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           +SL + +SSI++  KL  L L  C  L S+P ++H + L+ L L GCS L++L   +   
Sbjct: 861 TSLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATVHLEALEVLNLSGCSELEDLQDFSPN- 919

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
             S L L G  I E+PSSI  L+ +  L + +C  L+++   I  L+ + S+   R
Sbjct: 920 -LSELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAVVSLSAKR 974



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 8/129 (6%)

Query: 235 IHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           + +  NL+ +++  C     ++ +    Q  + L LK C R  S+P+     ++L  L +
Sbjct: 846 LSKAKNLEHIDLEGCTSLVKVNSSIRHHQKLTFLTLKDCSRLRSMPA-TVHLEALEVLNL 904

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   E L D   NL   + L + GTAI E+P  +G L  L  L+L+NC+EL+++   I
Sbjct: 905 SGCSELEDLQDFSPNL---SELYLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEI 961

Query: 351 FKLKSVESI 359
             LK+V S+
Sbjct: 962 SNLKAVVSL 970



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 9/173 (5%)

Query: 387 PSSVLKLNK-CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P ++++LN   S +  L       + L  + +   ++L + P  L   + LE + +EG T
Sbjct: 803 PKNIVELNMPYSNMTKLWKGTKNLEKLKRIILSHSRQLTKFP-SLSKAKNLEHIDLEGCT 861

Query: 445 GIREVPKSL-AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + +V  S+     L+ L LK CS   S+P+ +++ ++L  L +  C     L D   NL
Sbjct: 862 SLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATVHL-EALEVLNLSGCSELEDLQDFSPNL 920

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL 555
             L    + GTAI E+P S+G L+ L  L L + N LQ +P  ++ L ++VSL
Sbjct: 921 SEL---YLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAVVSL 970



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 33/167 (19%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPE--GLGQLALLSKLELKNCSELEYISSSIFK 352
           N  +L     NL+ L R+I+  +  R+L +   L +   L  ++L+ C+ L  ++SSI  
Sbjct: 815 NMTKLWKGTKNLEKLKRIILSHS--RQLTKFPSLSKAKNLEHIDLEGCTSLVKVNSSIRH 872

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL---------- 402
            + +  + + +CS L+  P      +    +E     VL L+ CS+LE L          
Sbjct: 873 HQKLTFLTLKDCSRLRSMP----ATVHLEALE-----VLNLSGCSELEDLQDFSPNLSEL 923

Query: 403 ----------PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                     PSS+     L +L++ +C +L+ LP E+ NL+A+  L
Sbjct: 924 YLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLPPEISNLKAVVSL 970


>gi|168041264|ref|XP_001773112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675659|gb|EDQ62152.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 333

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 21/321 (6%)

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE 273
           C+RL+ + +SI  L  L+ + I  C +L  L     N+          + L +K C    
Sbjct: 12  CERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSL-------TFLNMKGCSSLT 64

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALL 332
           SLP+      SLT+L +  C +   LP+ELGNL +L  L  +G + +  LP   G L  L
Sbjct: 65  SLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTSL 124

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVL 391
           + L +  CS L  + + +  L S+ ++ IS CS+L   P           +  + S + L
Sbjct: 125 TTLNMTGCSSLTSLPNELDNLTSLTTLNISWCSSLTSLPN---------ELGNLTSLTTL 175

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
            +  C +L S+P+ L    SLTSL +  C +L  LP+ELGNL +L  L +EG + +  +P
Sbjct: 176 NMWGCFRLTSMPNELGNLTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGCSSLISLP 235

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             L  L +L+ L +  CSS  SLP+ L    SLT L I  C +   LP+E+GNL  L  L
Sbjct: 236 NELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSLTSLPNELGNLTSLFFL 295

Query: 510 TIKG-TAIREVPESLGQLSSL 529
             +G +++  +P  L  L+SL
Sbjct: 296 NTEGCSSLTSLPNELDNLTSL 316



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 179/370 (48%), Gaps = 47/370 (12%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L+IL+L YC  L    +SI  L  L+ L+++ C+SLTSLP  + +   L  L ++GCS+L
Sbjct: 4   LKILNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKGCSSL 63

Query: 172 KNLP-KMTSCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
            +LP ++ +    +TL + G   +  LP+ +  L+++  L    C RL ++ +    L  
Sbjct: 64  TSLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTS 123

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L ++ +  C +L                                SLP+      SLT+L 
Sbjct: 124 LTTLNMTGCSSLT-------------------------------SLPNELDNLTSLTTLN 152

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISS 348
           I  C +   LP+ELGNL +L  L + G   +  +P  LG L  L+ L +K CS L  + +
Sbjct: 153 ISWCSSLTSLPNELGNLTSLTTLNMWGCFRLTSMPNELGNLTSLTSLNMKGCSRLTSLPN 212

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLC 407
            +  L S+ ++ +  CS+L   P           +  + S + L ++ CS L SLP+ L 
Sbjct: 213 ELGNLTSLTTLNMEGCSSLISLPN---------ELGNLTSLTTLNISWCSSLRSLPNELG 263

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKK 465
              SLT L I  C  L  LP+ELGNL +L  L  EG + +  +P  L  L +L  L ++ 
Sbjct: 264 NLTSLTILNISWCSSLTSLPNELGNLTSLFFLNTEGCSSLTSLPNELDNLTSLIILNMEG 323

Query: 466 CSSFESLPSR 475
           CSS  SLP+ 
Sbjct: 324 CSSLTSLPNE 333



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 148/308 (48%), Gaps = 37/308 (12%)

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIP 387
           L L+ C  L+ + +SI  L S++ + I NC +L   P        + F N+ G       
Sbjct: 7   LNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKG------- 59

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGI 446
                   CS L SLP+ L    SLT+L +  C  L  LP+ELGNL +L  L  EG + +
Sbjct: 60  --------CSSLTSLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRL 111

Query: 447 REVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             +P     L +L+ L +  CSS  SLP+ L    SLT+L I  C +   LP+E+GNL  
Sbjct: 112 TSLPNEFGNLTSLTTLNMTGCSSLTSLPNELDNLTSLTTLNISWCSSLTSLPNELGNLTS 171

Query: 506 LKVLTIKGT-AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNL 562
           L  L + G   +  +P  LG L+SL  L +   + L  +P  L  L+SL +L +   ++L
Sbjct: 172 LTTLNMWGCFRLTSMPNELGNLTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGCSSL 231

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--P 620
             +P  L  L+SL  L++           LRS P  +    TSL + +++  C  L   P
Sbjct: 232 ISLPNELGNLTSLTTLNI------SWCSSLRSLPNEL-GNLTSLTI-LNISWCSSLTSLP 283

Query: 621 NELSEIIK 628
           NEL  +  
Sbjct: 284 NELGNLTS 291



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 167/356 (46%), Gaps = 36/356 (10%)

Query: 87  LVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY--CSSLTETHSSIQYLNKLEVLDLDR 144
           + SLK ++L+Y + L  LP  S+   + + DL    C SLT   + +  L  L  L++  
Sbjct: 1   MTSLKILNLQYCERLKLLPT-SIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKG 59

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVG-IEELPSSIK 201
           C SLTSLP  + +   L  L ++GCS+L +LP ++ +    +TL   G   +  LP+   
Sbjct: 60  CSSLTSLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFG 119

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS 261
            L+++  L +  C  L ++ + +  L  L ++ I  C +L  L     N+    +     
Sbjct: 120 NLTSLTTLNMTGCSSLTSLPNELDNLTSLTTLNISWCSSLTSLPNELGNLTSLTT----- 174

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIR 320
             L +  C R  S+P+      SLTSL +  C     LP+ELGNL +L  L ++G +++ 
Sbjct: 175 --LNMWGCFRLTSMPNELGNLTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGCSSLI 232

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------I 373
            LP  LG L  L+ L +  CS L  + + +  L S+  + IS CS+L   P        +
Sbjct: 233 SLPNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSLTSLPNELGNLTSL 292

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
            F N +G               CS L SLP+ L    SL  L +  C  L  LP+E
Sbjct: 293 FFLNTEG---------------CSSLTSLPNELDNLTSLIILNMEGCSSLTSLPNE 333



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 3/113 (2%)

Query: 67  LVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L +L M G S +  L +++ NL SL  +++ +   L  LP+ L    +L IL++ +CSSL
Sbjct: 220 LTTLNMEGCSSLISLPNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSL 279

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
           T   + +  L  L  L+ + C SLTSLP  + +   L  L + GCS+L +LP 
Sbjct: 280 TSLPNELGNLTSLFFLNTEGCSSLTSLPNELDNLTSLIILNMEGCSSLTSLPN 332


>gi|41387774|gb|AAS01763.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1160

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 202/417 (48%), Gaps = 39/417 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNK----CMVHSLEGVPFTELRYFEWHQFPLKTLNI- 61
           E+ ++   F  M+ LR L+    + K     +  S + +P T L+   W +FP++ +   
Sbjct: 543 ELDVHQRAFKGMSNLRFLEIKNFRLKEDSLHLPPSFDYLPRT-LKLLSWSKFPMRCMPFD 601

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L+M  SK+ +LW+    L  LK +DL  S  L  +PDLS A NLEIL+L +C
Sbjct: 602 FRPENLVKLEMKYSKLHKLWEGDVPLTCLKEMDLYASSNLKVIPDLSKATNLEILNLQFC 661

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL E  SSI+ LNKL  LD+  CKSL  LPT  + K L RL    CS LK  PK ++  
Sbjct: 662 LSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGFNLKSLDRLNFSHCSKLKTFPKFSTN- 720

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLI----YSCKRLENISS-----SIFKLQFLES 232
             S L L    IEE PS++  L N+ +  I       K+ E         ++     L S
Sbjct: 721 -ISVLNLSQTNIEEFPSNLH-LKNLVKFSISKEESDVKQWEGEKPLTPFLAMMLSPTLTS 778

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + +   P+L  +E+PS   +  + K      L + +C   E+LP+G    +SL SL    
Sbjct: 779 LHLENLPSL--VELPSSFQNLNQLK-----RLFIVRCINLETLPTG-INLQSLDSLSFKG 830

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C      P+   N+     L +D TAI ++P  + + + L++L + +CS L+++   + K
Sbjct: 831 CSRLRSFPEISTNISV---LYLDETAIEDVPWWIEKFSNLTELSMHSCSRLKWVFLHMSK 887

Query: 353 LKSVESIEISNCSN-----LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           LK ++     NC       L G+P     +   NID +    +P  VL    C  L+
Sbjct: 888 LKHLKEALFPNCGKLTRVELSGYPSGMEVMKADNIDTAS-SSLPKVVLSFLDCFNLD 943



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 194/469 (41%), Gaps = 108/469 (23%)

Query: 279 QCMFKSLTSLEIIDCPNFE------RLPDELGNL-QALNRLIIDGTAIRELPEGLGQLAL 331
           Q  FK +++L  ++  NF        LP     L + L  L      +R +P       L
Sbjct: 548 QRAFKGMSNLRFLEIKNFRLKEDSLHLPPSFDYLPRTLKLLSWSKFPMRCMPFDFRPENL 607

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           + KLE+K  S+L  +      L  ++ +++   SNLK  P++       + +E     +L
Sbjct: 608 V-KLEMK-YSKLHKLWEGDVPLTCLKEMDLYASSNLKVIPDLS----KATNLE-----IL 656

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE------------- 438
            L  C  L  LPSS+     L +L+++DCK L+ LP    NL++L+              
Sbjct: 657 NLQFCLSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGF-NLKSLDRLNFSHCSKLKTFP 715

Query: 439 --------LRVEGTGIREVP-----KSLAQLALSK------------------------- 460
                   L +  T I E P     K+L + ++SK                         
Sbjct: 716 KFSTNISVLNLSQTNIEEFPSNLHLKNLVKFSISKEESDVKQWEGEKPLTPFLAMMLSPT 775

Query: 461 ---LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
              L L+   S   LPS       L  L I+ C N   LP  I NL+ L  L+ KG + +
Sbjct: 776 LTSLHLENLPSLVELPSSFQNLNQLKRLFIVRCINLETLPTGI-NLQSLDSLSFKGCSRL 834

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
           R  PE    +S    L L +  ++ +P  + + S+L   +LS ++  R+      +S LK
Sbjct: 835 RSFPEISTNISV---LYLDETAIEDVPWWIEKFSNLT--ELSMHSCSRLKWVFLHMSKLK 889

Query: 577 YLD--LFEN--NLDRIPEYLRSFPT--------SIPSEFTSL-RLSVDLRNCLKLDPNEL 623
           +L   LF N   L R+   L  +P+        +I +  +SL ++ +   +C  LDP  +
Sbjct: 890 HLKEALFPNCGKLTRVE--LSGYPSGMEVMKADNIDTASSSLPKVVLSFLDCFNLDPETV 947

Query: 624 SEIIKDGWMKQSVNGETYITKSMYFPGN-EIPKWFRHQSTGSTISLKTP 671
                        + E+ I   M F G  E+P +F +++TGS+ SL  P
Sbjct: 948 LH-----------HQESIIFNYMLFTGKEEVPSYFTYRTTGSS-SLTIP 984


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 184/368 (50%), Gaps = 33/368 (8%)

Query: 6   SEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWHQFPLK 57
            ++++ P  F  M  L+ LK         C +  K     L+ +P  EL Y  WH FPL+
Sbjct: 543 GKLRLRPDAFKGMYNLKYLKIYDSRCSRGCEAVFKLHFKGLDFLP-DELAYLHWHGFPLQ 601

Query: 58  TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
              +    +NLV LK+P S++ ++W D +    LK +DL +S  L +L  L+ A NLE L
Sbjct: 602 RFPLDFDPKNLVDLKLPHSELEEIWGDDKVAGMLKWVDLSHSSNLCRLLGLAKAHNLERL 661

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C+SL    SSI  L KL  L+L  C SL SLP    S+ L+ L+L GCS+LK  P 
Sbjct: 662 NLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETKSQSLQTLILSGCSSLKKFPL 721

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           ++       L L G  I+ LP SI+  S +  L + +CKRL+++SS+++KL+ L+ + + 
Sbjct: 722 ISES--IEVLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELILS 779

Query: 237 RCPNLQFL-----EMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQCMFKS 284
            C  L+       +M S  I   D T   E P+    S +K           S + +F S
Sbjct: 780 GCSQLEVFPEIKEDMESLEILLLDDTSITEMPNMKHLSNIKTFSLCGTNCEVSVRVLFLS 839

Query: 285 -------LTSLEIIDCPNFERLPDELGN-LQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
                  LT L +  C  + R+P+  GN L +L  L + G +I  LPE   QL  L   +
Sbjct: 840 PPLGCSRLTDLYLSRCSLY-RIPNISGNGLSSLQSLCLSGNSIENLPESFNQLHNLKWFD 898

Query: 337 LKNCSELE 344
           LK C  L+
Sbjct: 899 LKYCKNLK 906



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 223/531 (41%), Gaps = 110/531 (20%)

Query: 325  GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE------------ 372
            GL +   L +L L+ C+ L+ + SSI  L+ +  + +  C++LK  PE            
Sbjct: 651  GLAKAHNLERLNLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETKSQSLQTLIL 710

Query: 373  ---------------IPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMF 409
                           I    +DG+ I+ +P S+        L L  C +L+ L S+L   
Sbjct: 711  SGCSSLKKFPLISESIEVLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKL 770

Query: 410  KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP--KSLAQLALSKLKLKKCS 467
            K L  L +  C +LE  P+   ++E+LE L ++ T I E+P  K L+ +    L    C 
Sbjct: 771  KCLQELILSGCSQLEVFPEIKEDMESLEILLLDDTSITEMPNMKHLSNIKTFSLCGTNC- 829

Query: 468  SFESLPSRLYVS-----KSLTSLEIIDCKNFMRLPDEIGN-LEYLKVLTIKGTAIREVPE 521
              E     L++S       LT L +  C +  R+P+  GN L  L+ L + G +I  +PE
Sbjct: 830  --EVSVRVLFLSPPLGCSRLTDLYLSRC-SLYRIPNISGNGLSSLQSLCLSGNSIENLPE 886

Query: 522  SLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
            S  QL +L+W  L    NL+ +P                     +P+      +L+YLD 
Sbjct: 887  SFNQLHNLKWFDLKYCKNLKSLPV--------------------LPQ------NLQYLDA 920

Query: 581  FE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
             E  +L+ +   L   P ++     S+ +     NC KL+ +    ++    +K  +   
Sbjct: 921  HECESLETLANPLT--PLTVRERIHSMFM---FSNCYKLNQDAQESLVGHARIKSQLMAN 975

Query: 640  TYITK-----------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
              + +            + FP  EIP WF +Q  G ++ +  P        +G AF VVV
Sbjct: 976  ASVKRYYRGFIPEPLVGVCFPATEIPSWFFYQRLGRSLDISLPPHWCDTNFVGLAFSVVV 1035

Query: 689  ACSVSE-CCRHESVEDDRKCNLFDVVCDRRS---EGYDSYTSSYLGKISHVESDHVFLG- 743
            +    E C +  SV+   K    D    R +    G++    +   +   + SDHVF+G 
Sbjct: 1036 SFKEYEDCAKRFSVKFSGKFEDQDGSFTRFNFTLAGWNEPCGTLRHEPRKLTSDHVFMGY 1095

Query: 744  SSIFA-----GE-NSC---KRSDEFFFHIDRS-----CCEVKKCGIHFVHA 780
            +S F      GE NSC   K S +F+   D        CEV KCG+  V+ 
Sbjct: 1096 NSCFQVKKLHGESNSCCYTKASFKFYATDDEKKKKLEMCEVIKCGMSLVYV 1146


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 198/396 (50%), Gaps = 35/396 (8%)

Query: 8   IQINPYTFSKMTELRLLKFCGS--------KNKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
           ++++   F+KM +LRLLK   S        + K ++      P  ELRY  W  +P K+L
Sbjct: 408 LEVSTKIFAKMKKLRLLKIYSSGYYGTMEKQLKVILPEDFQFPAHELRYLHWEGYPFKSL 467

Query: 60  --NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
             N L   NL+ L M  S + QL    + L  LK ++L  S+ LT+    S   NLE L 
Sbjct: 468 PSNFLG-VNLIELNMKDSNIKQLMQRNERLEQLKFLNLSGSRQLTE-TSFSNMPNLETLI 525

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK 176
           L  C+SL     SI  L KL VL+L  C++LTSLP+SI +   L+ + L  CSNL+  P+
Sbjct: 526 LADCTSLNVVDPSIGDLKKLTVLNLLGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPE 585

Query: 177 MTSCHLR--STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
           M    ++  S L L G GI+ELPSSI+ L+ +  L +  CK L ++ SSI +L+ L  + 
Sbjct: 586 MKGSPMKALSDLLLDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLD 645

Query: 235 IHRCPNL----QFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK--- 283
           +H C NL    + +E   C    +I  +  KE PSS   LK   R   L    C+     
Sbjct: 646 LHGCSNLDTFPEIMEDMKCLESLDIRSSGIKELPSSIQNLKSLLR---LDMSNCLVTLPD 702

Query: 284 ---SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELK 338
              +L S+ +  C N E+ P       ++ +L      + E  +P  +  L  L  L L 
Sbjct: 703 SIYNLRSVTLRGCSNLEKFPKNPEGFYSIVQLDFSHCNLMEGSIPTEIWDLNSLEILNL- 761

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           + + +  I S I +L  ++ ++IS+C  L+  PE+P
Sbjct: 762 SWNHMVSIPSGISQLCKLDFLDISHCEMLQDIPELP 797



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 29/308 (9%)

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           Q  F +L+    +   +F  +P    NL+ L  ++ D T++  +   +G L  L+ L L 
Sbjct: 498 QLKFLNLSGSRQLTETSFSNMP----NLETL--ILADCTSLNVVDPSIGDLKKLTVLNLL 551

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN--------IDGSGIERIPSSV 390
            C  L  + SSI  L S+E++ +  CSNL+ FPE+            +DG GI+ +PSS+
Sbjct: 552 GCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLLLDGCGIKELPSSI 611

Query: 391 --------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                   L L+KC  L SLPSS+C  KSL  L++  C  L+  P+ + +++ LE L + 
Sbjct: 612 ELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCSNLDTFPEIMEDMKCLESLDIR 671

Query: 443 GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
            +GI+E+P S+  L  S L+L   +   +LP  +Y   +L S+ +  C N  + P     
Sbjct: 672 SSGIKELPSSIQNLK-SLLRLDMSNCLVTLPDSIY---NLRSVTLRGCSNLEKFPKNPEG 727

Query: 503 LEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN- 559
              +  L      + E  +P  +  L+SLE L LS N++  IP  ++QL  L  L +S+ 
Sbjct: 728 FYSIVQLDFSHCNLMEGSIPTEIWDLNSLEILNLSWNHMVSIPSGISQLCKLDFLDISHC 787

Query: 560 NNLERIPE 567
             L+ IPE
Sbjct: 788 EMLQDIPE 795



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 131/317 (41%), Gaps = 53/317 (16%)

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
             L  L  +G   + LP     + L+ +L +K+ +    I   + + + +E ++  N S 
Sbjct: 452 HELRYLHWEGYPFKSLPSNFLGVNLI-ELNMKDSN----IKQLMQRNERLEQLKFLNLSG 506

Query: 367 LKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
            +   E  F N+        P+   L L  C+ L  +  S+   K LT L ++ C+ L  
Sbjct: 507 SRQLTETSFSNM--------PNLETLILADCTSLNVVDPSIGDLKKLTVLNLLGCENLTS 558

Query: 426 LPDELGNLEALEELRVEG-TGIREVP--KSLAQLALSKLKLKKCSSFESLPSRLYVSKSL 482
           LP  +  L++LE + +   + + E P  K     ALS L L  C   + LPS + +   L
Sbjct: 559 LPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLLLDGCG-IKELPSSIELLTRL 617

Query: 483 TSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII 542
             L +  CKN   LP  I  L+ L  L + G +                      NL   
Sbjct: 618 KRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCS----------------------NLDTF 655

Query: 543 PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSE 602
           PE +  +  L SL + ++ ++ +P  +  L SL  LD+  N L            ++P  
Sbjct: 656 PEIMEDMKCLESLDIRSSGIKELPSSIQNLKSLLRLDM-SNCL-----------VTLPDS 703

Query: 603 FTSLRLSVDLRNCLKLD 619
             +LR SV LR C  L+
Sbjct: 704 IYNLR-SVTLRGCSNLE 719


>gi|224082021|ref|XP_002335506.1| predicted protein [Populus trichocarpa]
 gi|222834291|gb|EEE72768.1| predicted protein [Populus trichocarpa]
          Length = 310

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 145/246 (58%), Gaps = 8/246 (3%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPF--TELRYFEWHQFPL 56
           +SKI  EI+++     +M +LRLLK   S+   KC VH   G+     ELRY  W  +PL
Sbjct: 35  VSKIR-EIELSSTALERMYKLRLLKIYNSEAGAKCRVHLPHGLDSLSEELRYLHWDGYPL 93

Query: 57  KTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
            +L      +NLV L +  SKV QLW   QNLV+LK ++L   + +T LPDLS A+NLE 
Sbjct: 94  TSLPCSFRPQNLVELNLSSSKVKQLWRGDQNLVNLKDVNLSNCEHITFLPDLSKARNLER 153

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L+L +C+SL +   SIQ+L+KL  LDL  C SL +LP+ I+S+ LK L L  CS+LK  P
Sbjct: 154 LNLQFCTSLVKVPLSIQHLDKLIDLDLRCCTSLINLPSRINSRCLKSLNLSSCSDLKKCP 213

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
           +  +    + L L    +EELP +I  LS +  L + +CK L N+  +++ L+ L  + I
Sbjct: 214 E--TARELTYLNLNETAVEELPQTIGELSGLVTLNLKNCKLLVNLPENMYLLKSLLIVDI 271

Query: 236 HRCPNL 241
             C ++
Sbjct: 272 SGCSSI 277



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 14/196 (7%)

Query: 372 EIPFCNIDGSGIERIPSS-----VLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           E+ + + DG  +  +P S     +++LN   SK++ L        +L  + + +C+ +  
Sbjct: 82  ELRYLHWDGYPLTSLPCSFRPQNLVELNLSSSKVKQLWRGDQNLVNLKDVNLSNCEHITF 141

Query: 426 LPDELGNLEALEELRVE-GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLT 483
           LPD L     LE L ++  T + +VP S+  L  L  L L+ C+S  +LPSR+  S+ L 
Sbjct: 142 LPD-LSKARNLERLNLQFCTSLVKVPLSIQHLDKLIDLDLRCCTSLINLPSRIN-SRCLK 199

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI-I 542
           SL +  C +  + P+    L YL    +  TA+ E+P+++G+LS L  L L +  L + +
Sbjct: 200 SLNLSSCSDLKKCPETARELTYL---NLNETAVEELPQTIGELSGLVTLNLKNCKLLVNL 256

Query: 543 PESLNQLSSLVSLKLS 558
           PE++  L SL+ + +S
Sbjct: 257 PENMYLLKSLLIVDIS 272



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 16/191 (8%)

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           Q L  L +  + +++L  G   L  L  + L NC  + ++   + K +++E + +  C++
Sbjct: 103 QNLVELNLSSSKVKQLWRGDQNLVNLKDVNLSNCEHITFLPD-LSKARNLERLNLQFCTS 161

Query: 367 LKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           L   P           I+ +   + L L  C+ L +LPS +   + L SL +  C  L++
Sbjct: 162 LVKVP---------LSIQHLDKLIDLDLRCCTSLINLPSRI-NSRCLKSLNLSSCSDLKK 211

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTS 484
            P+       L  L +  T + E+P+++ +L+ L  L LK C    +LP  +Y+ KSL  
Sbjct: 212 CPE---TARELTYLNLNETAVEELPQTIGELSGLVTLNLKNCKLLVNLPENMYLLKSLLI 268

Query: 485 LEIIDCKNFMR 495
           ++I  C +  R
Sbjct: 269 VDISGCSSISR 279



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L L+ C    +LPS +   + L SL +  C + ++ P+    L  LN   ++ TA+ EL
Sbjct: 177 DLDLRCCTSLINLPS-RINSRCLKSLNLSSCSDLKKCPETARELTYLN---LNETAVEEL 232

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           P+ +G+L+ L  L LKNC  L  +  +++ LKS+  ++IS CS++
Sbjct: 233 PQTIGELSGLVTLNLKNCKLLVNLPENMYLLKSLLIVDISGCSSI 277


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1289

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 180/345 (52%), Gaps = 17/345 (4%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
            E Q N   FSKM+ LRLLK     N  +    E +   +L++ EWH +P K+L + L  +
Sbjct: 671  ESQWNIEAFSKMSRLRLLKI---NNVQLSEGPEDLS-NKLQFLEWHSYPSKSLPVGLQVD 726

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
             LV L M  S + QLW   ++ V+LK I+L  S  LTK PDL+   NLE L L  C+SL+
Sbjct: 727  QLVELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCTSLS 786

Query: 126  ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS---CHL 182
            E H S+ +  KL+ ++L  CKS+  LP ++    LK  +L GCS L+  P +     C +
Sbjct: 787  EVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCSKLEKFPDIVGNMKCLM 846

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
               L L G GI +L SS+  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+
Sbjct: 847  --VLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELK 904

Query: 243  FLEMPSCNIDGTRSKEQPS--SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-RL 299
            ++      ++     +     S    K+   P SL SG C   SL  L +  C   E  L
Sbjct: 905  YIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPPSL-SGLC---SLEVLGLCACNLREGAL 960

Query: 300  PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            P+++G L +L  L +       LP+ + QL  L  L L++C+ LE
Sbjct: 961  PEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLE 1005



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 171/364 (46%), Gaps = 62/364 (17%)

Query: 320  RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
            + LP GL Q+  L +L + N +  +L Y   S   LK +    S+ ++   +L G P + 
Sbjct: 717  KSLPVGL-QVDQLVELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLE 775

Query: 375  FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
               ++G  S  E  PS         + L  C  +  LP++L M  SL    +  C KLE+
Sbjct: 776  SLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEM-GSLKVCILDGCSKLEK 834

Query: 426  LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
             PD +GN++ L  LR++GTGI ++  S+  L  L  L +  C + ES+PS +   KSL  
Sbjct: 835  FPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKK 894

Query: 485  LEIIDCKNFMRLPDEIGNLEY------LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
            L++  C     +P+++G +E       LKVL++ G     +P SL  L SLE L L   N
Sbjct: 895  LDLSGCSELKYIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPPSLSGLCSLEVLGLCACN 954

Query: 539  LQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            L+   +PE +  LSSL SL LS NN   +P+ ++ L  L+ L L +  +      L S P
Sbjct: 955  LREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTM------LESLP 1008

Query: 597  TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
              +PS     ++   L N             + G+              +  PGNEIP W
Sbjct: 1009 -KVPS-----KVQTGLSNP------------RPGF-------------GIAIPGNEIPGW 1037

Query: 657  FRHQ 660
            F HQ
Sbjct: 1038 FNHQ 1041



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 22/301 (7%)

Query: 185  TLPLLGVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCP 239
            +LP+ G+ +++L       SN+ E L Y CK     ++ N+S+S++     ++  +   P
Sbjct: 718  SLPV-GLQVDQLVELHMANSNL-EQLWYGCKSAVNLKIINLSNSLY---LTKTPDLTGIP 772

Query: 240  NLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
            NL+ L +  C     +  + +  +    + L  C     LP+   M  SL    +  C  
Sbjct: 773  NLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEM-GSLKVCILDGCSK 831

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             E+ PD +GN++ L  L +DGT I +L   +  L  L  L + +C  LE I SSI  LKS
Sbjct: 832  LEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKS 891

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTS 414
            ++ +++S CS LK  PE     ++   +E   +  VL L+   ++  +P SL    SL  
Sbjct: 892  LKKLDLSGCSELKYIPE-KLGEVE--SLEEFDNLKVLSLDGFKRI-VMPPSLSGLCSLEV 947

Query: 415  LEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESL 472
            L +  C   E  LP+++G L +L  L +       +PKS+ QL  L  L L+ C+  ESL
Sbjct: 948  LGLCACNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESL 1007

Query: 473  P 473
            P
Sbjct: 1008 P 1008


>gi|296081000|emb|CBI18504.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 238/517 (46%), Gaps = 72/517 (13%)

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           +  L  L +  TAI ELP  +G +  L  L+LK C  L+ + +SI +LKS+E + +S CS
Sbjct: 1   MDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCS 60

Query: 366 NLKGFPEIPF-------CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFK 410
            L+ FPE+           +DG+ IE +PSS+        L + KC  L SLP  +C   
Sbjct: 61  KLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLT 120

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS------LAQLALSKLKLK 464
           SL +L +  C +L  LP  LG+L+ L +L  +GT I + P+S      L  L     K+ 
Sbjct: 121 SLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKIL 180

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
             +S  SL S   + ++ ++   +   +         NL+   +  I+G     +P  + 
Sbjct: 181 APTSLGSLFSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGA----IPNDIC 236

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFEN 583
            L SL+ L LS NN   IP  ++QL++L  L+L +  +L  IPE L P  S++ +D   +
Sbjct: 237 SLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHCQSLIIIPE-LPP--SIRDVD--AH 291

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY-- 641
           N   +      FPTS  S  T   L     NC K   ++ S+  ++   +   N      
Sbjct: 292 NCTAL------FPTS-SSVCTLQGLQFLFYNCSKPVEDQSSDQKRNALQRFPHNDAQKLL 344

Query: 642 --ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHE 699
             I  S+ FPG+ IP+W  HQ+ GS I ++ P     +  +GF  C ++          E
Sbjct: 345 ENIAFSIVFPGSGIPEWIWHQNVGSFIKIELPTDWYNDDFLGFVLCSIL----------E 394

Query: 700 SVEDDRKCNLFDVV---CDRRSEGYDSYTSSYLGKISHVESDHVFLGSS------IFA-- 748
            + +   C L   V    D +  G+D +   + G I  + S+HV+LG        +F   
Sbjct: 395 HLPERIICRLNSDVFYYGDFKDIGHDFH---WKGDI--LGSEHVWLGYQPCSQLRLFQFN 449

Query: 749 ---GENSCKRSDEFFFHIDRSCCE-VKKCGIHFVHAQ 781
                N  + S E     + S    VKKCG+  ++A+
Sbjct: 450 DPNDWNYIEISFEAAHRFNSSASNVVKKCGVCLIYAE 486



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 153/343 (44%), Gaps = 56/343 (16%)

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ--- 242
           L L    IEELPSSI  ++ +  L +  CK L+++ +SI +L+ LE + +  C  L+   
Sbjct: 7   LHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSKLENFP 66

Query: 243 --FLEMPSCN---IDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLE 289
              ++M +     +DGT  +  PSS         L ++KC    SLP G C   SL +L 
Sbjct: 67  EVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLI 126

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS-S 348
           +  C     LP  LG+LQ L +L  DGTAI + PE +  L  L  L    C  L   S  
Sbjct: 127 VSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKILAPTSLG 186

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           S+F    +      N SN             G G+                  LPSS   
Sbjct: 187 SLFSFWLMH----RNSSN-------------GVGLR-----------------LPSSFFS 212

Query: 409 FKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
           F+S T+L++ D K +E  +P+++ +L +L++L +       +P  ++QL  L  L+L  C
Sbjct: 213 FRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHC 272

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S   +P    +  S+  ++  +C         +  L+ L+ L
Sbjct: 273 QSLIIIPE---LPPSIRDVDAHNCTALFPTSSSVCTLQGLQFL 312



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 132/292 (45%), Gaps = 47/292 (16%)

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTS 179
           +++ E  SSI ++ +L +LDL RCK+L SLPTSI   K L+ L L GCS L+N P+ M  
Sbjct: 12  TAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSKLENFPEVMVD 71

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                 L L G  IE LPSSI  L  +  L +  C+ L ++   + KL  LE++ +  C 
Sbjct: 72  MENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLIVSGCS 131

Query: 240 NLQFL--------EMPSCNIDGTRSKEQPSSELKLK----------KCPRPES------- 274
            L  L         +   + DGT   + P S + L+          K   P S       
Sbjct: 132 QLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKILAPTSLGSLFSF 191

Query: 275 --------------LPSGQCMFKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAI 319
                         LPS    F+S T+L++ D    E  +P+++ +L +L +L +     
Sbjct: 192 WLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSRNNF 251

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
             +P G+ QL  L  L L +C  L  I        S+  ++  NC+ L  FP
Sbjct: 252 LSIPAGISQLTNLKDLRLGHCQSLIIIPELP---PSIRDVDAHNCTAL--FP 298


>gi|13517464|gb|AAK28803.1|AF310958_1 resistance-like protein P1-A [Linum usitatissimum]
          Length = 1200

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 218/461 (47%), Gaps = 48/461 (10%)

Query: 3    KINSEIQINPYTFSK--MTELRLLKFCGSKNKCMVH----SLEGVPFTELRYFEWHQFPL 56
            K N+   +N  TF K  + E+ L ++     K  +H     L  +P   LR+ +W  +P 
Sbjct: 586  KANAFEGMNSLTFLKFELPEIELPRYRLKNVKTKIHLPYDGLNSLP-DGLRWLQWDGYPS 644

Query: 57   KTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
            K+L    + ++LV L +  S + + W+  D   L++L  +DL+Y   L  +PD+S + NL
Sbjct: 645  KSLPAKFYPQHLVHLIIRDSPIQRCWEGYDQPQLLNLIVLDLRYCANLIAIPDISSSLNL 704

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            E L L  C SL E  S +QYL KL  LD+  CK+L  LP  + SK LK + ++G   +  
Sbjct: 705  EELLLFGCRSLVEVPSDVQYLTKLVTLDISHCKNLKPLPPKLDSKLLKHVRMQGL-GITR 763

Query: 174  LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY--------------------- 212
             P++ S  L     L G  + ELPS+I  +   G L ++                     
Sbjct: 764  CPEIDSRELEE-FGLSGTSLGELPSAIYNVKQNGVLRLHGKNITKFPGITTILKFFSLGG 822

Query: 213  -SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
             S + +++ +    + Q  + + + R  NL         +         S  L + + P 
Sbjct: 823  TSIREIDHFADYHQQHQTSDGLLLPRFHNLWLTGNRQLEVLPNSIWNMISEGLFICRSPL 882

Query: 272  PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
             ESLP       +LTSLE++DC +   +P  + NL++L  L +  T I+ LP  + +L  
Sbjct: 883  IESLPEISEPMNTLTSLEVVDCRSLTSIPTSISNLRSLRSLYLVETGIKSLPSSIQELRQ 942

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SV 390
            L  ++L++C  LE I +SI KL  + +  +S C ++   PE+P            P+   
Sbjct: 943  LYSIDLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPELP------------PNLKE 990

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL-PDEL 430
            L +++C  L++LPS+ C    L  +   +C +L++  P EL
Sbjct: 991  LDVSRCKSLQALPSNTCKLWYLNRIYFEECPQLDQTSPAEL 1031



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/431 (22%), Positives = 195/431 (45%), Gaps = 40/431 (9%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            +L  L++  C N   +PD   +L     L+    ++ E+P  +  L  L  L++ +C  L
Sbjct: 680  NLIVLDLRYCANLIAIPDISSSLNLEELLLFGCRSLVEVPSDVQYLTKLVTLDISHCKNL 739

Query: 344  E----YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            +     + S + K   ++ + I+ C  +    E+    + G+ +  +PS++  + +   L
Sbjct: 740  KPLPPKLDSKLLKHVRMQGLGITRCPEIDS-RELEEFGLSGTSLGELPSAIYNVKQNGVL 798

Query: 400  ESLPSSLCMFKSLT------SLEIIDCKKLERLPDELGNLEALEELRVEG------TGIR 447
                 ++  F  +T      SL     ++++   D     +  + L +        TG R
Sbjct: 799  RLHGKNITKFPGITTILKFFSLGGTSIREIDHFADYHQQHQTSDGLLLPRFHNLWLTGNR 858

Query: 448  EV---PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
            ++   P S+  +    L + +    ESLP       +LTSLE++DC++   +P  I NL 
Sbjct: 859  QLEVLPNSIWNMISEGLFICRSPLIESLPEISEPMNTLTSLEVVDCRSLTSIPTSISNLR 918

Query: 505  YLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLE 563
             L+ L +  T I+ +P S+ +L  L  + L D  +L+ IP S+++LS LV+  +S    E
Sbjct: 919  SLRSLYLVETGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKLVTFSMS--GCE 976

Query: 564  RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNEL 623
             IP   +   +LK LD+         + L++ P++    +   R+  +   C +LD    
Sbjct: 977  SIPSLPELPPNLKELDVSRC------KSLQALPSNTCKLWYLNRIYFE--ECPQLDQTSP 1028

Query: 624  SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG----STISLKTP---QPTGY 676
            +E++ +  +  S++      + +   G+E+P+WF ++S      ST+ ++ P       +
Sbjct: 1029 AELMANFLVHASLSPS--YERQVRCSGSELPEWFSYRSMEDEDCSTVKVELPLANDSPDH 1086

Query: 677  NKLMGFAFCVV 687
              + G AF  V
Sbjct: 1087 PMIKGIAFGCV 1097


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 133/396 (33%), Positives = 197/396 (49%), Gaps = 43/396 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM++LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 509 EAQWNMEAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 564

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S++ QLW   ++ V+LK I+L  S  L K  D +   NLE L L  C+SL+
Sbjct: 565 ELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLS 624

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP-------KMT 178
           E H S+    KLE + L  C S+  LP+++  + LK  +L GCS L+  P       K+T
Sbjct: 625 EVHPSLARHKKLEYVTLMDCVSIRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNKLT 684

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
             HL  T      GI +L SSI  L  +  L + +CK LE+I SSI  L+ L+ + +  C
Sbjct: 685 VLHLDET------GITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGC 738

Query: 239 PNLQFLE--------MPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCM- 281
             LQ +         +   ++ GT  ++ P+S         L L  C R    P+G  + 
Sbjct: 739 SELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDRLP 798

Query: 282 -FKSLTSLEIID-CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
               L SLE++D C    R   LP+++G L +L  L +       LPE + QL+ L  L 
Sbjct: 799 SLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPESINQLSGLEMLV 858

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           L++C  LE +     K   V+++ ++ C  LK  P+
Sbjct: 859 LEDCRMLESLPEVPSK---VQTVNLNGCIRLKEIPD 891



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 188/400 (47%), Gaps = 65/400 (16%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
            SL +I   +F R+P+       L  LI++G T++ E+   L +   L  + L +C  + 
Sbjct: 596 NSLNLIKTLDFTRIPN-------LENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIR 648

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSS-------- 389
            + S++ +++S++   +  CS L+ FP+I          ++D +GI ++ SS        
Sbjct: 649 ILPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLE 707

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           VL +N C  LES+PSS+   KSL  L++  C +L+ +P  LG +E LEE+ V GT IR+ 
Sbjct: 708 VLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQP 767

Query: 450 PKSL-AQLALSKLKLKKCSSFESLPS--RLYVSKSLTSLEIID-CKNFMR---LPDEIGN 502
           P S+    +L  L L  C      P+  RL     L SLE++D C   +R   LP++IG 
Sbjct: 768 PASIFLLKSLKVLSLDGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGC 827

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L  LK L +       +PES+ QLS LE LVL D  +    ESL ++ S V   ++ N  
Sbjct: 828 LSSLKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRML---ESLPEVPSKVQ-TVNLNGC 883

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
            R+ E  DP+                        +S  SEF  L       NC  L  + 
Sbjct: 884 IRLKEIPDPI---------------------KLSSSKRSEFICL-------NCWALYEHN 915

Query: 623 LSEIIKDGWMKQSVNG--ETYITKSMYFPGNEIPKWFRHQ 660
             +      +++ + G         +  PGNEIP WF HQ
Sbjct: 916 GQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQ 955


>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1276

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 147/268 (54%), Gaps = 16/268 (5%)

Query: 8   IQINPYTFSKMTELRLLKFCG--SKNKCMV---HSLEGVPFTELRYFEWHQFPLKTL-NI 61
           ++++P  F K+  LR LK     SKN C V     L  +P  ELR   W + PL++L   
Sbjct: 660 VELSPTVFEKIYRLRFLKLYSPTSKNHCNVSLPQGLYSLP-DELRLLHWERCPLESLPRK 718

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + +N+V L MP S +T+LW   +NL +LKRI L +S+ L K P LS A+NLE +DL  C
Sbjct: 719 FNPKNIVELNMPYSNMTKLWKGTKNLENLKRIILSHSRRLIKFPRLSKARNLEHIDLEGC 778

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           +SL + +SSI + +KL  L L  C  L ++PT++H + L+ L L GC  L++ P   S +
Sbjct: 779 TSLVKVNSSILHHHKLIFLSLKDCSHLQTMPTTVHLEALEVLNLSGCLELEDFPDF-SPN 837

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           L+  L L G  I E+PSSI  LS +  L + +C RL+++   I  L+ + ++   R    
Sbjct: 838 LKE-LYLAGTAIREMPSSIGGLSKLVTLDLENCDRLQHLPPEIRNLKVVVTLSAKR---- 892

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKC 269
                 S N+     K  P +  +LK+ 
Sbjct: 893 ---PAASMNLSSVEDKAPPYTRCRLKRV 917



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 210 LIYSCKRLENISSSIFK--LQFLESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSE 263
           L    K LEN+   I     + ++  R+ +  NL+ +++  C     ++ +         
Sbjct: 737 LWKGTKNLENLKRIILSHSRRLIKFPRLSKARNLEHIDLEGCTSLVKVNSSILHHHKLIF 796

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   +++P+     ++L  L +  C   E  PD   NL+    L + GTAIRE+P
Sbjct: 797 LSLKDCSHLQTMPT-TVHLEALEVLNLSGCLELEDFPDFSPNLK---ELYLAGTAIREMP 852

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
             +G L+ L  L+L+NC  L+++   I  LK V ++
Sbjct: 853 SSIGGLSKLVTLDLENCDRLQHLPPEIRNLKVVVTL 888



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 13/195 (6%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P ++++LN   S +  L       ++L  + +   ++L + P  L     LE + +EG T
Sbjct: 721 PKNIVELNMPYSNMTKLWKGTKNLENLKRIILSHSRRLIKFP-RLSKARNLEHIDLEGCT 779

Query: 445 GIREVPKS-LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + +V  S L    L  L LK CS  +++P+ +++ ++L  L +  C      PD   NL
Sbjct: 780 SLVKVNSSILHHHKLIFLSLKDCSHLQTMPTTVHL-EALEVLNLSGCLELEDFPDFSPNL 838

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK----LS 558
              K L + GTAIRE+P S+G LS L  L L + + LQ +P  +  L  +V+L      +
Sbjct: 839 ---KELYLAGTAIREMPSSIGGLSKLVTLDLENCDRLQHLPPEIRNLKVVVTLSAKRPAA 895

Query: 559 NNNLERIPERLDPLS 573
           + NL  + ++  P +
Sbjct: 896 SMNLSSVEDKAPPYT 910



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 56/264 (21%)

Query: 234 RIHRCPNLQFLEMPS------CNIDGTRSKEQPSSELKL---KKCPRPESLPSGQCMFKS 284
           +I+R   L+FL++ S      CN+   +       EL+L   ++CP  ESLP     F  
Sbjct: 669 KIYR---LRFLKLYSPTSKNHCNVSLPQGLYSLPDELRLLHWERCPL-ESLPR---KFNP 721

Query: 285 LTSLEI-IDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSE 342
              +E+ +   N  +L     NL+ L R+I+  +  + + P  L +   L  ++L+ C+ 
Sbjct: 722 KNIVELNMPYSNMTKLWKGTKNLENLKRIILSHSRRLIKFPR-LSKARNLEHIDLEGCTS 780

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           L  ++SSI     +  + + +CS+L+  P                               
Sbjct: 781 LVKVNSSILHHHKLIFLSLKDCSHLQTMP------------------------------- 809

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
             +    ++L  L +  C +LE  PD   N   L+EL + GT IRE+P S+  L+ L  L
Sbjct: 810 --TTVHLEALEVLNLSGCLELEDFPDFSPN---LKELYLAGTAIREMPSSIGGLSKLVTL 864

Query: 462 KLKKCSSFESLPSRLYVSKSLTSL 485
            L+ C   + LP  +   K + +L
Sbjct: 865 DLENCDRLQHLPPEIRNLKVVVTL 888


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 211/805 (26%), Positives = 327/805 (40%), Gaps = 215/805 (26%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
            +SEI I   +F+ MT+LRLL+     N  +  +L+ +P +EL++ +W   PL+ L  + L
Sbjct: 735  SSEITIPVESFAPMTKLRLLQI---NNVELEGNLKLLP-SELKWIQWKGCPLENLPPDFL 790

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLVS-------------------------------LK 91
                L  L +  S + Q+      +VS                               LK
Sbjct: 791  A-RQLSVLDLSESGIRQVQTLRNKMVSFLLSCSMGKHIVLSQILTVKTFLCFFQVDENLK 849

Query: 92   RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
             + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L+  
Sbjct: 850  VVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEF 909

Query: 152  PTSIHS-KYLKRLVLRGCSNLKNLPK----MTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
               +   K L++L L GCS+L  LP+    MTS      L L G  I+ LP SI  L N+
Sbjct: 910  LVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSL---KELLLDGTAIKNLPESINRLQNL 966

Query: 207  GELLIYSCK----------------------RLENISSSIFKLQFLESIRIHRCPNL--- 241
              L +  CK                       L+N+ SSI  L+ L+ + + RC +L   
Sbjct: 967  EILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKI 1026

Query: 242  -----QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
                 +   +    I+G+  +E P          +P SLP       SL      DC   
Sbjct: 1027 PDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDCKFL 1070

Query: 297  ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  + ++
Sbjct: 1071 KQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTL 1130

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             S+                 N++GS IE +P    KL K                L  L 
Sbjct: 1131 YSL-----------------NLEGSNIEELPEEFGKLEK----------------LVELR 1157

Query: 417  IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
            + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                   
Sbjct: 1158 MSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS------------------- 1198

Query: 477  YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLE-- 530
                +L  LE++  K   R+ +            + GT+      EVP S  +L  LE  
Sbjct: 1199 ----NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLEEL 1243

Query: 531  ----WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNL 585
                W +        IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L
Sbjct: 1244 DACSWRISGK-----IPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCREL 1298

Query: 586  DRIP---------EYLRSFPTSIPSEFTSLRLSVDLR--NCLK-LDPNELSEI--IKDGW 631
             R+P              F     S+ + L +  DL   NC K +D   L  +  +K  +
Sbjct: 1299 KRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLNLTNCAKVVDIPGLEHLTALKRLY 1358

Query: 632  M------------KQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKL 679
            M            K+       + +++  PGN +P WF   S G      + QP    +L
Sbjct: 1359 MTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF---SQGPVTF--SAQPN--REL 1411

Query: 680  MGFAFCVVVACSVSECCRHESVEDD 704
             G    VVVA        ++  EDD
Sbjct: 1412 RGVIIAVVVAL-------NDETEDD 1429


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1212

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 175/337 (51%), Gaps = 35/337 (10%)

Query: 35  VHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLK 91
           +H  +G+ +   EL Y  WH +PL+++ +    +NLV LK+P S++ ++WDD ++   LK
Sbjct: 576 LHLRKGLDYLPNELTYLHWHGYPLQSIPLDFDPKNLVDLKLPHSQLAEIWDDEKDAGMLK 635

Query: 92  RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
            +DL +S  L +   L+ AQNLE L+L  C+SL +  ++I  L KL  L+L  C SL SL
Sbjct: 636 WVDLSHSLNLHQCLGLANAQNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSL 695

Query: 152 PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
           P  + ++ L+ L+L GCS LK  P ++       L L G  I+ LP SI+ L  +  L +
Sbjct: 696 PKGLKTQSLQTLILSGCSRLKKFPLISEN--VEVLLLDGTAIKSLPESIETLRRLALLNL 753

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-----EMPSCNI---DGTRSKEQP--- 260
            +CK+L+++SS ++KL+ L+ + +  C  L+       +M S  I   D T   E P   
Sbjct: 754 KNCKKLKHLSSDLYKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMM 813

Query: 261 -------------SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
                        SS++ +     P +L   +     LT L +  C  + +LPD +G L 
Sbjct: 814 HLSNIQTFSLCGTSSQVSVSMFFMPPTLGCSR-----LTDLYLSRCSLY-KLPDNIGGLS 867

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           +L  L + G  I  LPE   QL  L   +LK C  L+
Sbjct: 868 SLQSLCLSGNNIENLPESFNQLHNLKWFDLKFCKMLK 904



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 225/517 (43%), Gaps = 118/517 (22%)

Query: 354  KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            +++E + +  C++LK  P         +G+E++    L L  C+ L SLP  L   +SL 
Sbjct: 655  QNLERLNLEGCTSLKKLPTTI------NGLEKL--VYLNLRDCTSLRSLPKGL-KTQSLQ 705

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESL 472
            +L +  C +L++ P    N+E L    ++GT I+ +P+S+  L  L+ L LK C   + L
Sbjct: 706  TLILSGCSRLKKFPLISENVEVL---LLDGTAIKSLPESIETLRRLALLNLKNCKKLKHL 762

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE----------- 521
             S LY  K L  L +  C      P+   ++E L++L +  TAI E+P+           
Sbjct: 763  SSDLYKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMMHLSNIQTFS 822

Query: 522  -----------------SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
                             +LG  S L  L LS  +L  +P+++  LSSL SL LS NN+E 
Sbjct: 823  LCGTSSQVSVSMFFMPPTLG-CSRLTDLYLSRCSLYKLPDNIGGLSSLQSLCLSGNNIEN 881

Query: 565  IPERLDPLSSLKYLDL-FENNLDRIP------EYLRSF-------------PTSIPSEFT 604
            +PE  + L +LK+ DL F   L  +P      +YL +              P ++     
Sbjct: 882  LPESFNQLHNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLETLENPLTPLTVGERIH 941

Query: 605  SLRLSVDLRNCLKLDPNEL---------SEIIKDGWMKQSVNGETYITKSMY---FPGNE 652
            S+ +     NC KL+ +           S+++ +  +K+   G  +I + +    +   +
Sbjct: 942  SMFI---FSNCYKLNQDAQSLVGHARIKSQLMANASVKRYYRG--FIPEPLVGICYAATD 996

Query: 653  IPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDV 712
            IP WF HQ  G ++ +  P        +G A  VVV+            ED  K   F V
Sbjct: 997  IPSWFCHQRLGRSLEIPLPPHWCDTDFVGLALSVVVS--------FMDYEDSAK--RFSV 1046

Query: 713  VCDRRSEGYDSYTSSY----------LGKISH----VESDHVFLG-SSIF-----AGE-- 750
             C  + E  D   + +           G +SH    + SDHVF+G +S F      GE  
Sbjct: 1047 KCCGKFENQDGSFTRFDFTLAGWNEPCGSLSHEPRKLASDHVFMGYNSCFHVKNLHGESK 1106

Query: 751  NSC--KRSDEFFFHIDRS-----CCEVKKCGIHFVHA 780
            N C  K S EF+   D +      CEV KCG+  V+ 
Sbjct: 1107 NCCYTKASFEFYVTDDETRKKIETCEVIKCGMSLVYV 1143



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 45/299 (15%)

Query: 231 ESIRIHRC---PNLQFLEMPSCNIDGTRS-KEQPSS--------ELKLKKCPRPESLPSG 278
            S+ +H+C    N Q LE    N++G  S K+ P++         L L+ C    SLP G
Sbjct: 641 HSLNLHQCLGLANAQNLE--RLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKG 698

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
               +SL +L +  C   ++ P    N++ L   ++DGTAI+ LPE +  L  L+ L LK
Sbjct: 699 -LKTQSLQTLILSGCSRLKKFPLISENVEVL---LLDGTAIKSLPESIETLRRLALLNLK 754

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIP---- 387
           NC +L+++SS ++KLK ++ + +S CS L+ FPEI           +D + I  +P    
Sbjct: 755 NCKKLKHLSSDLYKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMMH 814

Query: 388 -SSVLKLNKCSKLESLPSSLCMF--------KSLTSLEIIDCKKLERLPDELGNLEALEE 438
            S++   + C    S   S+ MF          LT L +  C  L +LPD +G L +L+ 
Sbjct: 815 LSNIQTFSLCGT--SSQVSVSMFFMPPTLGCSRLTDLYLSRC-SLYKLPDNIGGLSSLQS 871

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           L + G  I  +P+S  QL  L    LK C   +SLP    + ++L  L+  +C++   L
Sbjct: 872 LCLSGNNIENLPESFNQLHNLKWFDLKFCKMLKSLP---VLPQNLQYLDAHECESLETL 927


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 133/396 (33%), Positives = 197/396 (49%), Gaps = 43/396 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM++LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 578 EAQWNMEAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 633

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S++ QLW   ++ V+LK I+L  S  L K  D +   NLE L L  C+SL+
Sbjct: 634 ELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLS 693

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP-------KMT 178
           E H S+    KLE + L  C S+  LP+++  + LK  +L GCS L+  P       K+T
Sbjct: 694 EVHPSLARHKKLEYVTLMDCVSIRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNKLT 753

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
             HL  T      GI +L SSI  L  +  L + +CK LE+I SSI  L+ L+ + +  C
Sbjct: 754 VLHLDET------GITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLSGC 807

Query: 239 PNLQFLE--------MPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCM- 281
             LQ +         +   ++ GT  ++ P+S         L L  C R    P+G  + 
Sbjct: 808 SELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDRLP 867

Query: 282 -FKSLTSLEIID-CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
               L SLE++D C    R   LP+++G L +L  L +       LPE + QL+ L  L 
Sbjct: 868 SLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPESINQLSGLEMLV 927

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           L++C  LE +     K   V+++ ++ C  LK  P+
Sbjct: 928 LEDCRMLESLPEVPSK---VQTVNLNGCIRLKEIPD 960



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 189/401 (47%), Gaps = 65/401 (16%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
             SL +I   +F R+P+       L  LI++G T++ E+   L +   L  + L +C  + 
Sbjct: 665  NSLNLIKTLDFTRIPN-------LENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIR 717

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSS-------- 389
             + S++ +++S++   +  CS L+ FP+I          ++D +GI ++ SS        
Sbjct: 718  ILPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLE 776

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            VL +N C  LES+PSS+   KSL  L++  C +L+ +P  LG +E LEE+ V GT IR+ 
Sbjct: 777  VLSMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQP 836

Query: 450  PKSL-AQLALSKLKLKKCSSFESLPS--RLYVSKSLTSLEIID-CKNFMR---LPDEIGN 502
            P S+    +L  L L  C      P+  RL     L SLE++D C   +R   LP++IG 
Sbjct: 837  PASIFLLKSLKVLSLDGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGC 896

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
            L  LK L +       +PES+ QLS LE LVL D  +    ESL ++ S V   ++ N  
Sbjct: 897  LSSLKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRML---ESLPEVPSKVQ-TVNLNGC 952

Query: 563  ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
             R+ E  DP+                        +S  SEF  L       NC  L  + 
Sbjct: 953  IRLKEIPDPI---------------------KLSSSKRSEFICL-------NCWALYEHN 984

Query: 623  LSEIIKDGWMKQSVNG--ETYITKSMYFPGNEIPKWFRHQS 661
              +      +++ + G         +  PGNEIP WF HQ+
Sbjct: 985  GQDSFGLTMLERYLKGLPNPRPGFGIAVPGNEIPGWFNHQN 1025


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 180/620 (29%), Positives = 278/620 (44%), Gaps = 118/620 (19%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
            IQ+    F  M +LRLLK   ++   +    E +P  +L YF W  +PL+ L +  H +
Sbjct: 452 HIQLTTEVFRNMNQLRLLKVEFNQIVQLSQDFE-LPCHDLVYFHWDYYPLEYLPSNFHTD 510

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           NLV L +  S++  LW+       LK IDL YS              + ++D+       
Sbjct: 511 NLVELNLWCSRIKHLWEGNMPAKKLKVIDLSYS--------------MHLVDI------- 549

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS 184
              SSI  +  LE L L  C  L SLP +    + L+ L   GCSNL++ PK+    +RS
Sbjct: 550 ---SSISSMPNLETLTLKGCTRLKSLPRNFPKLECLQTLSCCGCSNLESFPKIEE-EMRS 605

Query: 185 --TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L   GI  LPSSI  L+ + EL + SCK+L ++  SI+ L  L+++ +  C  L 
Sbjct: 606 LRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRL- 664

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +  P  NI                               K+L  L++  C N E LP+ 
Sbjct: 665 -VGFPGINIGS----------------------------LKALKYLDLSWCENLESLPNS 695

Query: 303 LGNLQALNRLIIDG-TAIRELPE-GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           +G+L +L  L++ G + ++  P+   G L  L  L+   C  LE +  SI+ + S++++ 
Sbjct: 696 IGSLSSLQTLLLIGCSKLKGFPDINFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLG 755

Query: 361 ISNCSNLKGFPEI---------PF----CNIDGSGIERIPSSVLKLNKC-SKLESLPSSL 406
           I+NC  L+   E+         PF    C+I  S I          + C S LE+L S  
Sbjct: 756 ITNCPKLEEMLEMKLGVDPCPWPFSPLTCHISNSAIIWDD----HWHDCFSSLEALDSQ- 810

Query: 407 CMFKSLTSLEIIDCKKLER-LPDELGNLEALEELRVEG--TGIREVPKSLAQL-ALSKLK 462
           C   SL  L +     +E  +P    +L +LE L +    T +  +   +  L +L KL 
Sbjct: 811 CPLSSLVELSVRKFYDMEEDIPIGSSHLTSLEILSLGNVPTVVEGILYDIFHLSSLVKLS 870

Query: 463 LKKCS-SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           L KC  + E +P  +     L  L + DC N M                 KGT +    +
Sbjct: 871 LTKCKPTEEGIPRDIQNLSPLQQLSLHDC-NLM-----------------KGTIL----D 908

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
            +  L+SLE L L  N+   IP  +++LS+L +L LS+   L++IPE     SSL++LD 
Sbjct: 909 HICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPEL---PSSLRFLDA 965

Query: 581 FENNLDRIPEYLRSFPTSIP 600
                   P+ + S P  +P
Sbjct: 966 ------HCPDRISSSPLLLP 979


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 169/318 (53%), Gaps = 42/318 (13%)

Query: 237 RCPNLQFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           R PNL+ L +  C    +I  +    +  + L L+ C + ++LP      +SL  L +  
Sbjct: 556 RMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSY 615

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C  FE+ P + GN+++L +L +  TAI++LP+ +G L  L  L+L +CS+ E        
Sbjct: 616 CSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGN 675

Query: 353 LKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIP---SSVLKLNKC----SK 398
           +KS+  + + N + +K  P+       +   ++ GS  E+ P    ++  LN+     + 
Sbjct: 676 MKSLNQLLLRNTA-IKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRNTA 734

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
           ++ LP S+   +SL SL++ DC K E+ P++ GN+++L++LR+  T I+++P S+  L  
Sbjct: 735 IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDL-- 792

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
                                KSL  L++ DC  F + P++ GN++ L+ L +K TAI++
Sbjct: 793 ---------------------KSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKD 831

Query: 519 VPESLGQLSSLEWLVLSD 536
           +P ++ +L  L+ LVLSD
Sbjct: 832 LPTNISRLKKLKRLVLSD 849



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 214/478 (44%), Gaps = 99/478 (20%)

Query: 31  NKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPG--SKVTQLWD------ 82
           +KC++     +P+ E+R  +  Q        + WE +V  K P   +K ++LWD      
Sbjct: 479 DKCLI----TLPYNEIRMHDLIQH-------MGWE-IVREKFPDEPNKWSRLWDPCDFER 526

Query: 83  ---DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEV 139
                ++L  LK IDL YS+ L ++ + S   NLE L L  C SL + H S+  L KL  
Sbjct: 527 ALTAYEDLERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTT 586

Query: 140 LDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVGIEELP 197
           L L  C  L +LP SI   + L+ L L  CS  +  P K  +      L L    I++LP
Sbjct: 587 LSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLP 646

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
            SI  L ++  L +  C + E        ++ L  + +                  T  K
Sbjct: 647 DSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLR----------------NTAIK 690

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIID 315
           + P S                      L SLE +D     FE+ P++ GN+++LN+L++ 
Sbjct: 691 DLPDS-------------------IGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLR 731

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            TAI++LP+ +G L  L  L+L +CS+ E        +KS++ + + N            
Sbjct: 732 NTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRN------------ 779

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                + I+ +P S+  L                KSL  L++ DC K E+ P++ GN++ 
Sbjct: 780 -----TAIKDLPDSIGDL----------------KSLEFLDLSDCSKFEKFPEKGGNMKR 818

Query: 436 LEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSS-FESLPSRLYVSKSLTSLEIIDCK 491
           L EL ++ T I+++P ++++L  L +L L  CS  +E L S      +L  L I  CK
Sbjct: 819 LRELHLKITAIKDLPTNISRLKKLKRLVLSDCSDLWEGLISNQLC--NLQKLNISQCK 874



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 173/339 (51%), Gaps = 22/339 (6%)

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDG- 316
           P    K  +   P         ++ L  L++ID     +L    E   +  L  L ++G 
Sbjct: 509 PDEPNKWSRLWDPCDFERALTAYEDLERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGC 568

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----- 371
            ++ ++   +G L  L+ L L++C +L+ +  SI+ L+S+E + +S CS  + FP     
Sbjct: 569 VSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGN 628

Query: 372 --EIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
              +   ++  + I+ +P S+        L L+ CSK E  P      KSL  L ++   
Sbjct: 629 MKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQL-LLRNT 687

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
            ++ LPD +G+LE+LE L V G+   + P+    + +L++L L+  ++ + LP  +   +
Sbjct: 688 AIKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRN-TAIKDLPDSIGDLE 746

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           SL SL++ DC  F + P++ GN++ LK L ++ TAI+++P+S+G L SLE+L LSD +  
Sbjct: 747 SLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKF 806

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +  PE    +  L  L L    ++ +P  +  L  LK L
Sbjct: 807 EKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLKRL 845



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 34/244 (13%)

Query: 378 IDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
           I  S   R+P+   L LN C  L  +  S+   K LT+L +  C KL+ LPD + +LE+L
Sbjct: 549 IQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESL 608

Query: 437 EELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           E                       L L  CS FE  P +    KSL  L + D      L
Sbjct: 609 E----------------------ILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTA-IKDL 645

Query: 497 PDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           PD IG+LE L++L +   +   + PE  G + SL  L+L +  ++ +P+S+  L SL SL
Sbjct: 646 PDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESL 705

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
            +S +  E+ PE+   + SL  L L  N        ++  P SI  +  SL  S+DL +C
Sbjct: 706 DVSGSKFEKFPEKGGNMKSLNQL-LLRNT------AIKDLPDSI-GDLESLE-SLDLSDC 756

Query: 616 LKLD 619
            K +
Sbjct: 757 SKFE 760


>gi|30696077|ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737797|dbj|BAF00837.1| hypothetical protein [Arabidopsis thaliana]
 gi|332008724|gb|AED96107.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1229

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 207/433 (47%), Gaps = 58/433 (13%)

Query: 3   KINSEIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPFTELRYFEWHQFP 55
           +IN  + ++  +F  M  L+ LK         G     +   L  +P  +LR   W++FP
Sbjct: 532 EINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFP 590

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           L+ + +    E LV+L+M  S++ +LW+  Q L SLK++DL  S+ L ++PDLS A NLE
Sbjct: 591 LRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLE 650

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            +DL  C SL    SS++ L+KL VL +  C ++  LPT ++ + L  L L  CS L++ 
Sbjct: 651 EMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSF 710

Query: 175 PKMTSCHLRSTLPLLGVGIEELPS-SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           P+++     S L L G  I+E  S  I+ +S +  L    C  L+++ S+ F+ + L S+
Sbjct: 711 PQISRN--ISILNLSGTAIDEESSLWIENMSRLTHLRWDFCP-LKSLPSN-FRQEHLVSL 766

Query: 234 RIHRCPNLQFLEMPS-----CNIDGTRS---KEQPS-------SELKLKKCPRPESLPSG 278
            +      +  E         NID + S   KE P+         L L  C    ++PS 
Sbjct: 767 HMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPNLSKVTNLDTLDLYGCKSLVTVPSS 826

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALN---------------------RLIIDGT 317
                 LT L +  C   E LP ++ NL++L+                     RL++D T
Sbjct: 827 IQSLSKLTELNMRRCTGLEALPTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDT 885

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
           AI E+P  +     L+ L +K C  L  IS+SI +LK +E    S+C  L  F       
Sbjct: 886 AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFD------ 939

Query: 378 IDGSGIERIPSSV 390
            D S + RI  ++
Sbjct: 940 -DASMVRRILRTI 951



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 202/476 (42%), Gaps = 84/476 (17%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G     SL  +++    N + +PD     NL+ ++  +    ++  LP  +  L 
Sbjct: 614  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMD--LCSCKSLVTLPSSVRNLD 671

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERI 386
             L  L + +CS +E + + +  L+S++ + + +CS L+ FP+I       N+ G+ I+  
Sbjct: 672  KLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEE 730

Query: 387  PS---------SVLKLNKC---------------------SKLESLPSSLCMFKSLTSLE 416
             S         + L+ + C                     SKLE L      F +L +++
Sbjct: 731  SSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNID 790

Query: 417  IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            +   +KL+  P+ L  +  L+ L + G   +  VP S+  L+ L++L +++C+  E+LP+
Sbjct: 791  LSLSEKLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPT 849

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
             + + +SL +L++  C      P    N+E L    +  TAI EVP  +     L  L +
Sbjct: 850  DVNL-ESLHTLDLSGCSKLTTFPKISRNIERL---LLDDTAIEEVPSWIDDFFELTTLSM 905

Query: 535  SD-NNLQIIPESLNQLSSLVSLKLSN----------NNLERIPERLDPL-------SSLK 576
                 L+ I  S+ +L  +     S+          + + RI   +D L       S L 
Sbjct: 906  KGCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLH 965

Query: 577  YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
             + +    L  I   +  +P ++   F S    +   NC  LD +               
Sbjct: 966  AIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLIFANCSSLDRD--------------- 1010

Query: 637  NGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
              ET I +S +     PG ++P  F +Q+ GS++S+   +     + +GF  C+V+
Sbjct: 1011 -AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHESYYSEEFLGFKACIVL 1065


>gi|9758205|dbj|BAB08679.1| disease resistance protein; strong similarity to TMV resistance
           protein N [Arabidopsis thaliana]
          Length = 1239

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 207/433 (47%), Gaps = 58/433 (13%)

Query: 3   KINSEIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPFTELRYFEWHQFP 55
           +IN  + ++  +F  M  L+ LK         G     +   L  +P  +LR   W++FP
Sbjct: 532 EINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFP 590

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           L+ + +    E LV+L+M  S++ +LW+  Q L SLK++DL  S+ L ++PDLS A NLE
Sbjct: 591 LRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLE 650

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            +DL  C SL    SS++ L+KL VL +  C ++  LPT ++ + L  L L  CS L++ 
Sbjct: 651 EMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSF 710

Query: 175 PKMTSCHLRSTLPLLGVGIEELPS-SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           P+++     S L L G  I+E  S  I+ +S +  L    C  L+++ S+ F+ + L S+
Sbjct: 711 PQISRN--ISILNLSGTAIDEESSLWIENMSRLTHLRWDFCP-LKSLPSN-FRQEHLVSL 766

Query: 234 RIHRCPNLQFLEMPS-----CNIDGTRS---KEQPS-------SELKLKKCPRPESLPSG 278
            +      +  E         NID + S   KE P+         L L  C    ++PS 
Sbjct: 767 HMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPNLSKVTNLDTLDLYGCKSLVTVPSS 826

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALN---------------------RLIIDGT 317
                 LT L +  C   E LP ++ NL++L+                     RL++D T
Sbjct: 827 IQSLSKLTELNMRRCTGLEALPTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDT 885

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
           AI E+P  +     L+ L +K C  L  IS+SI +LK +E    S+C  L  F       
Sbjct: 886 AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFD------ 939

Query: 378 IDGSGIERIPSSV 390
            D S + RI  ++
Sbjct: 940 -DASMVRRILRTI 951



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 202/476 (42%), Gaps = 84/476 (17%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G     SL  +++    N + +PD     NL+ ++  +    ++  LP  +  L 
Sbjct: 614  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMD--LCSCKSLVTLPSSVRNLD 671

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERI 386
             L  L + +CS +E + + +  L+S++ + + +CS L+ FP+I       N+ G+ I+  
Sbjct: 672  KLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEE 730

Query: 387  PS---------SVLKLNKC---------------------SKLESLPSSLCMFKSLTSLE 416
             S         + L+ + C                     SKLE L      F +L +++
Sbjct: 731  SSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNID 790

Query: 417  IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            +   +KL+  P+ L  +  L+ L + G   +  VP S+  L+ L++L +++C+  E+LP+
Sbjct: 791  LSLSEKLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPT 849

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
             + + +SL +L++  C      P    N+E L    +  TAI EVP  +     L  L +
Sbjct: 850  DVNL-ESLHTLDLSGCSKLTTFPKISRNIERL---LLDDTAIEEVPSWIDDFFELTTLSM 905

Query: 535  SD-NNLQIIPESLNQLSSLVSLKLSN----------NNLERIPERLDPL-------SSLK 576
                 L+ I  S+ +L  +     S+          + + RI   +D L       S L 
Sbjct: 906  KGCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLH 965

Query: 577  YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
             + +    L  I   +  +P ++   F S    +   NC  LD +               
Sbjct: 966  AIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLIFANCSSLDRD--------------- 1010

Query: 637  NGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
              ET I +S +     PG ++P  F +Q+ GS++S+   +     + +GF  C+V+
Sbjct: 1011 -AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHESYYSEEFLGFKACIVL 1065


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 200/409 (48%), Gaps = 45/409 (11%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVH----SLEGVPFTELRYFEWHQF 54
           MS     I +    F+ M  LR L    S++  +  +H     LE +P  ELRY  W+ F
Sbjct: 353 MSVFPRHILLKSDAFAMMDGLRFLNIYISRHSQEDKMHLPPTGLEYIP-NELRYLRWYGF 411

Query: 55  PLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P K+L       +LV L +  SK+ +LW  V+++ +L++IDL YS  LT+LPDLS+A+NL
Sbjct: 412 PSKSLPPSFRAVHLVELHLRKSKLVKLWTGVKDVGNLRKIDLSYSPYLTELPDLSMAKNL 471

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           E L L  C SLTE  SS+QYL+KLE +DL  C +L S P  + SK L  L +  C  +  
Sbjct: 472 ECLRLKDCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFPM-LDSKVLSFLSISRCLYVTT 530

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            P M S +L   L L    I+E+P S+    N+  L +  C ++          +F E  
Sbjct: 531 CP-MISQNL-VWLRLEQTSIKEVPQSVT--GNLQLLNLDGCSKMT---------KFPE-- 575

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSL 285
                 NL+ +E    N+ GT  KE PSS         L +  C + ES P      KSL
Sbjct: 576 ------NLEDIE--ELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLESFPEITVHMKSL 627

Query: 286 TSLEIIDCPNFERLP-DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
             L I+     + +P     ++ +L  L +DGT I+ LPE    L  L+     +C+ LE
Sbjct: 628 EHL-ILSKTGIKEIPLISFKHMISLISLDLDGTPIKALPELPPSLRYLNT---HDCASLE 683

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            ++S+I   +    ++ +NC  L   P +   ++     E IP   +++
Sbjct: 684 TVTSTINIGRLRLGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGSIQM 732



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 143/340 (42%), Gaps = 84/340 (24%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL----------------- 433
           L+L  C  L  +PSSL     L  +++ DC  L   P     +                 
Sbjct: 474 LRLKDCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDSKVLSFLSISRCLYVTTCPM 533

Query: 434 --EALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
             + L  LR+E T I+EVP+S                         V+ +L  L +  C 
Sbjct: 534 ISQNLVWLRLEQTSIKEVPQS-------------------------VTGNLQLLNLDGCS 568

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
              + P+   NLE ++ L ++GTAI+EVP S+  L+ L  L +S  + L+  PE    + 
Sbjct: 569 KMTKFPE---NLEDIEELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLESFPEITVHMK 625

Query: 551 SLVSLKLSNNNLERIP-ERLDPLSSLKYLDLFENNLDRIPE------YLRSFPTSIPSEF 603
           SL  L LS   ++ IP      + SL  LDL    +  +PE      YL +   +     
Sbjct: 626 SLEHLILSKTGIKEIPLISFKHMISLISLDLDGTPIKALPELPPSLRYLNTHDCASLETV 685

Query: 604 TS------LRLSVDLRNCLKLDPNEL----------SEIIKDGWMKQSVNGETYITKSMY 647
           TS      LRL +D  NC KLD   L           E I DG ++            M 
Sbjct: 686 TSTINIGRLRLGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGSIQ------------MV 733

Query: 648 FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
            PG+EIP+WF  +  GS+++++ P    + +L G AFC+V
Sbjct: 734 LPGSEIPEWFGDKGIGSSLTIQLPS-NCHQQLKGIAFCLV 772



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 77/263 (29%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++GNL+ ++  +     + ELP+ L     L  L LK+C  L  + SS+  L  +E I++
Sbjct: 444 DVGNLRKID--LSYSPYLTELPD-LSMAKNLECLRLKDCPSLTEVPSSLQYLDKLEEIDL 500

Query: 362 SNCSNLKGFP--------------------------EIPFCNIDGSGIERIPSSV----- 390
           S+C+NL+ FP                           + +  ++ + I+ +P SV     
Sbjct: 501 SDCNNLRSFPMLDSKVLSFLSISRCLYVTTCPMISQNLVWLRLEQTSIKEVPQSVTGNLQ 560

Query: 391 -LKLNKCSKL--------------------ESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
            L L+ CSK+                    + +PSS+     L  L +  C KLE  P+ 
Sbjct: 561 LLNLDGCSKMTKFPENLEDIEELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLESFPEI 620

Query: 430 LGNLEALEELRVEGTGIREVP--------------------KSLAQL--ALSKLKLKKCS 467
             ++++LE L +  TGI+E+P                    K+L +L  +L  L    C+
Sbjct: 621 TVHMKSLEHLILSKTGIKEIPLISFKHMISLISLDLDGTPIKALPELPPSLRYLNTHDCA 680

Query: 468 SFESLPSRLYVSKSLTSLEIIDC 490
           S E++ S + + +    L+  +C
Sbjct: 681 SLETVTSTINIGRLRLGLDFTNC 703


>gi|334188321|ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008726|gb|AED96109.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1181

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 207/433 (47%), Gaps = 58/433 (13%)

Query: 3   KINSEIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPFTELRYFEWHQFP 55
           +IN  + ++  +F  M  L+ LK         G     +   L  +P  +LR   W++FP
Sbjct: 484 EINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFP 542

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           L+ + +    E LV+L+M  S++ +LW+  Q L SLK++DL  S+ L ++PDLS A NLE
Sbjct: 543 LRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLE 602

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            +DL  C SL    SS++ L+KL VL +  C ++  LPT ++ + L  L L  CS L++ 
Sbjct: 603 EMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSF 662

Query: 175 PKMTSCHLRSTLPLLGVGIEELPS-SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           P+++     S L L G  I+E  S  I+ +S +  L    C  L+++ S+ F+ + L S+
Sbjct: 663 PQISRN--ISILNLSGTAIDEESSLWIENMSRLTHLRWDFCP-LKSLPSN-FRQEHLVSL 718

Query: 234 RIHRCPNLQFLEMPS-----CNIDGTRS---KEQPS-------SELKLKKCPRPESLPSG 278
            +      +  E         NID + S   KE P+         L L  C    ++PS 
Sbjct: 719 HMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPNLSKVTNLDTLDLYGCKSLVTVPSS 778

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALN---------------------RLIIDGT 317
                 LT L +  C   E LP ++ NL++L+                     RL++D T
Sbjct: 779 IQSLSKLTELNMRRCTGLEALPTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDT 837

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
           AI E+P  +     L+ L +K C  L  IS+SI +LK +E    S+C  L  F       
Sbjct: 838 AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFD------ 891

Query: 378 IDGSGIERIPSSV 390
            D S + RI  ++
Sbjct: 892 -DASMVRRILRTI 903



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 202/476 (42%), Gaps = 84/476 (17%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G     SL  +++    N + +PD     NL+ ++  +    ++  LP  +  L 
Sbjct: 566  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMD--LCSCKSLVTLPSSVRNLD 623

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERI 386
             L  L + +CS +E + + +  L+S++ + + +CS L+ FP+I       N+ G+ I+  
Sbjct: 624  KLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEE 682

Query: 387  PS---------SVLKLNKC---------------------SKLESLPSSLCMFKSLTSLE 416
             S         + L+ + C                     SKLE L      F +L +++
Sbjct: 683  SSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNID 742

Query: 417  IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            +   +KL+  P+ L  +  L+ L + G   +  VP S+  L+ L++L +++C+  E+LP+
Sbjct: 743  LSLSEKLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPT 801

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
             + + +SL +L++  C      P    N+E L    +  TAI EVP  +     L  L +
Sbjct: 802  DVNL-ESLHTLDLSGCSKLTTFPKISRNIERL---LLDDTAIEEVPSWIDDFFELTTLSM 857

Query: 535  SD-NNLQIIPESLNQLSSLVSLKLSN----------NNLERIPERLDPL-------SSLK 576
                 L+ I  S+ +L  +     S+          + + RI   +D L       S L 
Sbjct: 858  KGCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLH 917

Query: 577  YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
             + +    L  I   +  +P ++   F S    +   NC  LD +               
Sbjct: 918  AIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLIFANCSSLDRD--------------- 962

Query: 637  NGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
              ET I +S +     PG ++P  F +Q+ GS++S+   +     + +GF  C+V+
Sbjct: 963  -AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHESYYSEEFLGFKACIVL 1017


>gi|30696080|ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008725|gb|AED96108.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1175

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 207/433 (47%), Gaps = 58/433 (13%)

Query: 3   KINSEIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPFTELRYFEWHQFP 55
           +IN  + ++  +F  M  L+ LK         G     +   L  +P  +LR   W++FP
Sbjct: 468 EINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLP-RKLRLLHWYKFP 526

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           L+ + +    E LV+L+M  S++ +LW+  Q L SLK++DL  S+ L ++PDLS A NLE
Sbjct: 527 LRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLE 586

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            +DL  C SL    SS++ L+KL VL +  C ++  LPT ++ + L  L L  CS L++ 
Sbjct: 587 EMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDLNLESLDLLNLEDCSQLRSF 646

Query: 175 PKMTSCHLRSTLPLLGVGIEELPS-SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           P+++     S L L G  I+E  S  I+ +S +  L    C  L+++ S+ F+ + L S+
Sbjct: 647 PQISRN--ISILNLSGTAIDEESSLWIENMSRLTHLRWDFCP-LKSLPSN-FRQEHLVSL 702

Query: 234 RIHRCPNLQFLEMPS-----CNIDGTRS---KEQPS-------SELKLKKCPRPESLPSG 278
            +      +  E         NID + S   KE P+         L L  C    ++PS 
Sbjct: 703 HMTHSKLEKLWEGAQPFGNLVNIDLSLSEKLKEFPNLSKVTNLDTLDLYGCKSLVTVPSS 762

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALN---------------------RLIIDGT 317
                 LT L +  C   E LP ++ NL++L+                     RL++D T
Sbjct: 763 IQSLSKLTELNMRRCTGLEALPTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDT 821

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
           AI E+P  +     L+ L +K C  L  IS+SI +LK +E    S+C  L  F       
Sbjct: 822 AIEEVPSWIDDFFELTTLSMKGCKRLRNISTSICELKCIEVANFSDCERLTEFD------ 875

Query: 378 IDGSGIERIPSSV 390
            D S + RI  ++
Sbjct: 876 -DASMVRRILRTI 887



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 202/476 (42%), Gaps = 84/476 (17%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            E L  G     SL  +++    N + +PD     NL+ ++  +    ++  LP  +  L 
Sbjct: 550  ERLWEGTQQLGSLKKMDLSKSENLKEIPDLSYAVNLEEMD--LCSCKSLVTLPSSVRNLD 607

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERI 386
             L  L + +CS +E + + +  L+S++ + + +CS L+ FP+I       N+ G+ I+  
Sbjct: 608  KLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEE 666

Query: 387  PS---------SVLKLNKC---------------------SKLESLPSSLCMFKSLTSLE 416
             S         + L+ + C                     SKLE L      F +L +++
Sbjct: 667  SSLWIENMSRLTHLRWDFCPLKSLPSNFRQEHLVSLHMTHSKLEKLWEGAQPFGNLVNID 726

Query: 417  IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            +   +KL+  P+ L  +  L+ L + G   +  VP S+  L+ L++L +++C+  E+LP+
Sbjct: 727  LSLSEKLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEALPT 785

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
             + + +SL +L++  C      P    N+E L    +  TAI EVP  +     L  L +
Sbjct: 786  DVNL-ESLHTLDLSGCSKLTTFPKISRNIERL---LLDDTAIEEVPSWIDDFFELTTLSM 841

Query: 535  SD-NNLQIIPESLNQLSSLVSLKLSN----------NNLERIPERLDPL-------SSLK 576
                 L+ I  S+ +L  +     S+          + + RI   +D L       S L 
Sbjct: 842  KGCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMVRRILRTIDDLIALYEEASFLH 901

Query: 577  YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
             + +    L  I   +  +P ++   F S    +   NC  LD +               
Sbjct: 902  AIFVLCRKLVSICAMVFKYPQALSYFFNSPEADLIFANCSSLDRD--------------- 946

Query: 637  NGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
              ET I +S +     PG ++P  F +Q+ GS++S+   +     + +GF  C+V+
Sbjct: 947  -AETLILESNHGCAVLPGGKVPNCFMNQACGSSVSIPLHESYYSEEFLGFKACIVL 1001


>gi|227438175|gb|ACP30577.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1235

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 156/513 (30%), Positives = 238/513 (46%), Gaps = 86/513 (16%)

Query: 3    KINSE---IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
            K N+E   I+I+   F  M+ L+ LK  G  +   +         +LR+ +W  FP+  L
Sbjct: 596  KYNTEGEKIEISEKAFEGMSNLQFLKVSGYSHPLQLTRGLNYISHKLRFLQWTHFPMTCL 655

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
             +IL+ E LV L M  SK+ +LW+  + L  LK +DL YS+ L +LPDLS A NLE LDL
Sbjct: 656  PSILNLEFLVELIMHTSKLEKLWEGTKPLRCLKWMDLSYSENLKELPDLSTATNLE-LDL 714

Query: 119  GYCSSLTETHSSIQYL--NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP 175
              CSSL +    + YL  N LE L +  C SL   P+ I +   L++L L    NL  LP
Sbjct: 715  SNCSSLIK----LPYLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYPNLLELP 770

Query: 176  -------KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
                    +   +L + L L+     ELP S+  L  + +L++  C +LE     +F   
Sbjct: 771  SYVGNATNLDELYLSNCLDLV-----ELPLSLGNLQKLKKLVLKGCSKLE-----VFPTN 820

Query: 229  FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            F          +L+ L +  C            S L L  C    ++P       SL  L
Sbjct: 821  F-------NVESLEILCLAGC------------SSLDLGGCSTIGNVP-------SLRML 854

Query: 289  EIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYIS 347
             +   P    LP  +GN   L  L + G + + ELP  +G L  L  L L+ CS+LE++ 
Sbjct: 855  NLRSLPQLLDLPSFIGNAINLYYLDLSGCSNLVELPVFIGNLQKLYMLGLEGCSKLEFLP 914

Query: 348  SSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLKLNKCSKLESLP 403
            ++I  L+S+  + + +CS LK FP+I       ++ G+ IE++P S+             
Sbjct: 915  TNI-NLESLSWLNLRDCSMLKCFPQISTNIRDLDLTGTAIEQVPPSI------------- 960

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
                  +S   LE +     E L +    LE + EL +  T I+E+P  + Q++ L+   
Sbjct: 961  ------RSWPRLEDLTMSYFENLKEFPHALERITELCLTDTDIQELPPWVKQISCLNSFV 1014

Query: 463  LKKCSSFESLPS-----RLYVSKSLTSLEIIDC 490
            LK C    S+P      R   +    SLEI++C
Sbjct: 1015 LKGCRKLVSIPPISDSIRFLDASDCESLEILEC 1047



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 187/461 (40%), Gaps = 94/461 (20%)

Query: 334  KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-----EIPFCNIDGS---GIER 385
            +L+L NCS L  I        S+E + I  CS+L  FP      +    +D +    +  
Sbjct: 711  ELDLSNCSSL--IKLPYLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYPNLLE 768

Query: 386  IPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
            +PS V        L L+ C  L  LP SL   + L  L +  C KLE  P    N+E+LE
Sbjct: 769  LPSYVGNATNLDELYLSNCLDLVELPLSLGNLQKLKKLVLKGCSKLEVFPTNF-NVESLE 827

Query: 438  ELRVEG---------TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
             L + G         + I  VP      +L  L L+       LPS +  + +L  L++ 
Sbjct: 828  ILCLAGCSSLDLGGCSTIGNVP------SLRMLNLRSLPQLLDLPSFIGNAINLYYLDLS 881

Query: 489  DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD------------ 536
             C N + LP  IGNL+ L +L ++G +  E   +   L SL WL L D            
Sbjct: 882  GCSNLVELPVFIGNLQKLYMLGLEGCSKLEFLPTNINLESLSWLNLRDCSMLKCFPQIST 941

Query: 537  ---------NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLD 586
                       ++ +P S+     L  L +S   NL+  P  L+ ++ L   D    ++ 
Sbjct: 942  NIRDLDLTGTAIEQVPPSIRSWPRLEDLTMSYFENLKEFPHALERITELCLTD---TDIQ 998

Query: 587  RIPEYLRSFP-------------TSIPSEFTSLRLSVDLRNCLKLD------PNELSEII 627
             +P +++                 SIP    S+R  +D  +C  L+       N++S + 
Sbjct: 999  ELPPWVKQISCLNSFVLKGCRKLVSIPPISDSIRF-LDASDCESLEILECSFHNQISRLN 1057

Query: 628  KDGWMKQSVNGETYI---TKSMYFPGNEIPKWFRHQSTGST-ISLK---TPQPTGYNKLM 680
                 K +      I   ++    PG ++P +F H++TG   +S+K    P P    K +
Sbjct: 1058 FANCFKLNQEARDLIIQNSREAVLPGGQVPAYFTHRATGGGPLSIKLNEKPLP----KSL 1113

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGY 721
             F  C+++     +   H++   ++   +F +  +R    Y
Sbjct: 1114 RFKACILLV----DKGDHDACSKEKSTEVFAMYKNRHHRLY 1150


>gi|168042655|ref|XP_001773803.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674918|gb|EDQ61420.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 357

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 188/368 (51%), Gaps = 22/368 (5%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +  LP+ +  L+++  L+I  C  L ++ + +  L  L ++ +  C +L  L     N+ 
Sbjct: 1   MTSLPNELDNLTSLTTLIISGCSSLTSLPNELGNLTSLTTLCVQTCSSLTSLPNELGNLT 60

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
              +       L + +C    SL +      SLT+L++ +C +   LP+EL NL +L  L
Sbjct: 61  SLTT-------LDVNECSSLTSLANELGNLTSLTTLDVSECSSLTSLPNELDNLTSLTTL 113

Query: 313 IIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            I G +++  LP  +G L  L+K ++  CS L  + + +  L S+ ++ + NCS+L   P
Sbjct: 114 NISGCSSMTSLPNEVGNLTSLTKFDISYCSSLISLPNELGNLTSLTTLYMCNCSSLTSLP 173

Query: 372 EIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
                      +  + S + L ++ CS + SLP+ L    SL   ++ +C  L  LP+E+
Sbjct: 174 N---------ELGNLTSLATLNISYCSSMTSLPNELSNLTSLIEFDVSECSNLTSLPNEV 224

Query: 431 GNLEALEELRVE-GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           GNL +L  L +   + +  +   L  L +L+ L + +CSS  SLP+ L    SLT+L I 
Sbjct: 225 GNLTSLTTLNISYCSSLTSLSNELGNLTSLTTLYMCRCSSLTSLPNELGNFTSLTTLNIS 284

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESL 546
            C +   LP+E+GNL  L  L + G +++  +P  LG L+SL  + +S+ ++L   P  L
Sbjct: 285 YCSSLTLLPNELGNLTSLTTLYMWGCSSMTSLPNDLGNLTSLIEVDISECSSLTSSPNEL 344

Query: 547 NQLSSLVS 554
             L+SL S
Sbjct: 345 GNLTSLTS 352



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 169/343 (49%), Gaps = 52/343 (15%)

Query: 296 FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
              LP+EL NL +L  LII G +++  LP  LG L  L+ L ++ CS L  + + +  L 
Sbjct: 1   MTSLPNELDNLTSLTTLIISGCSSLTSLPNELGNLTSLTTLCVQTCSSLTSLPNELGNLT 60

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
           S+ ++++                                N+CS L SL + L    SLT+
Sbjct: 61  SLTTLDV--------------------------------NECSSLTSLANELGNLTSLTT 88

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESL 472
           L++ +C  L  LP+EL NL +L  L + G + +  +P  +  L +L+K  +  CSS  SL
Sbjct: 89  LDVSECSSLTSLPNELDNLTSLTTLNISGCSSMTSLPNEVGNLTSLTKFDISYCSSLISL 148

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-GTAIREVPESLGQLSSL-E 530
           P+ L    SLT+L + +C +   LP+E+GNL  L  L I   +++  +P  L  L+SL E
Sbjct: 149 PNELGNLTSLTTLYMCNCSSLTSLPNELGNLTSLATLNISYCSSMTSLPNELSNLTSLIE 208

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + V   +NL  +P  +  L+SL +L +S  ++L  +   L  L+SL  L +         
Sbjct: 209 FDVSECSNLTSLPNEVGNLTSLTTLNISYCSSLTSLSNELGNLTSLTTLYMCR------- 261

Query: 590 EYLRSFPTSIPSE---FTSL-RLSVDLRNCLKLDPNELSEIIK 628
               S  TS+P+E   FTSL  L++   + L L PNEL  +  
Sbjct: 262 ---CSSLTSLPNELGNFTSLTTLNISYCSSLTLLPNELGNLTS 301



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 179/382 (46%), Gaps = 53/382 (13%)

Query: 148 LTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV----GIEELPSSIKC 202
           +TSLP  + +   L  L++ GCS+L +LP     +L S L  L V     +  LP+ +  
Sbjct: 1   MTSLPNELDNLTSLTTLIISGCSSLTSLPNELG-NLTS-LTTLCVQTCSSLTSLPNELGN 58

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
           L+++  L +  C  L ++++ +  L  L ++ +  C +L    +P+  +D   S     +
Sbjct: 59  LTSLTTLDVNECSSLTSLANELGNLTSLTTLDVSECSSLT--SLPN-ELDNLTSL----T 111

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRE 321
            L +  C    SLP+      SLT  +I  C +   LP+ELGNL +L  L + + +++  
Sbjct: 112 TLNISGCSSMTSLPNEVGNLTSLTKFDISYCSSLISLPNELGNLTSLTTLYMCNCSSLTS 171

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--------- 372
           LP  LG L  L+ L +  CS +  + + +  L S+   ++S CSNL   P          
Sbjct: 172 LPNELGNLTSLATLNISYCSSMTSLPNELSNLTSLIEFDVSECSNLTSLPNEVGNLTSLT 231

Query: 373 ---IPFCNIDGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              I +C+   S    + +    + L + +CS L SLP+ L  F SLT+L I  C  L  
Sbjct: 232 TLNISYCSSLTSLSNELGNLTSLTTLYMCRCSSLTSLPNELGNFTSLTTLNISYCSSLTL 291

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           LP+ELGNL +L  L + G                      CSS  SLP+ L    SL  +
Sbjct: 292 LPNELGNLTSLTTLYMWG----------------------CSSMTSLPNDLGNLTSLIEV 329

Query: 486 EIIDCKNFMRLPDEIGNLEYLK 507
           +I +C +    P+E+GNL  L 
Sbjct: 330 DISECSSLTSSPNELGNLTSLT 351



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 175/379 (46%), Gaps = 43/379 (11%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L +L + G S +T L +++ NL SL  + ++    LT LP+ L    +L  LD+  
Sbjct: 10  NLTSLTTLIISGCSSLTSLPNELGNLTSLTTLCVQTCSSLTSLPNELGNLTSLTTLDVNE 69

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           CSSLT   + +  L  L  LD+  C SLTSLP  + +   L  L + GCS       MTS
Sbjct: 70  CSSLTSLANELGNLTSLTTLDVSECSSLTSLPNELDNLTSLTTLNISGCS------SMTS 123

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                           LP+ +  L+++ +  I  C  L ++ + +  L  L ++ +  C 
Sbjct: 124 ----------------LPNEVGNLTSLTKFDISYCSSLISLPNELGNLTSLTTLYMCNCS 167

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           +L  L     N+    +       L +  C    SLP+      SL   ++ +C N   L
Sbjct: 168 SLTSLPNELGNLTSLAT-------LNISYCSSMTSLPNELSNLTSLIEFDVSECSNLTSL 220

Query: 300 PDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           P+E+GNL +L  L I   +++  L   LG L  L+ L +  CS L  + + +    S+ +
Sbjct: 221 PNEVGNLTSLTTLNISYCSSLTSLSNELGNLTSLTTLYMCRCSSLTSLPNELGNFTSLTT 280

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
           + IS CS+L   P           +  + S + L +  CS + SLP+ L    SL  ++I
Sbjct: 281 LNISYCSSLTLLPN---------ELGNLTSLTTLYMWGCSSMTSLPNDLGNLTSLIEVDI 331

Query: 418 IDCKKLERLPDELGNLEAL 436
            +C  L   P+ELGNL +L
Sbjct: 332 SECSSLTSSPNELGNLTSL 350


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1378

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 164/590 (27%), Positives = 259/590 (43%), Gaps = 85/590 (14%)

Query: 14   TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKM 72
            +F  M  LRLL+    +   +  + + +P +EL++ +W   PLKTL +      L  L +
Sbjct: 600  SFQPMVTLRLLQINHVQ---LGGNFKNIP-SELKWLQWKGCPLKTLPSTFCPRKLTVLDL 655

Query: 73   PGSKVTQLWDDVQNLVS--LKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSS 130
              SK+ ++W      V+  L  ++L     LT LPD+S  Q LE L L  C SL   H S
Sbjct: 656  SESKIERVWGCHNKKVAENLMVMNLSGCNSLTDLPDVSGHQTLEKLILERCLSLVTIHKS 715

Query: 131  IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
            +  L  L  L+L  C +L   P+ +   ++L+   L GC+ LK                 
Sbjct: 716  VGDLRTLLHLNLMGCSNLLEFPSDVSGLRHLEIFNLSGCTKLK----------------- 758

Query: 190  GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
                 ELP  +  ++++ ELL+     + N+  SIF+L+ LE   +  C +L+  ++P C
Sbjct: 759  -----ELPEDMSSMTSLRELLVDKTA-IVNLPDSIFRLKKLEKFSLDSCSSLK--QLPDC 810

Query: 250  --NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
               +   R      S L        E LP       +L  L ++ C     +PD +G L+
Sbjct: 811  IGRLSSLRELSLNGSGL--------EELPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLR 862

Query: 308  ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS------------ 355
            +L  L I  ++I+ELP  +G L+ L  L L +C  L  +  SI  L S            
Sbjct: 863  SLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEGLVSLARFQLDGTLLT 922

Query: 356  -----------VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
                       +E++E+ NC     FPEI       + +  + + +L     S +  LP 
Sbjct: 923  GVPDQVGSLNMLETLEMRNCEIFSSFPEI-------NNMSSLTTLIL---DNSLITELPE 972

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            S+   + L  L + +CK+L+RLP  +  L+ L  L +  T + E+P++   L+ L  LK+
Sbjct: 973  SIGKLERLNMLMLNNCKQLQRLPASIRKLKNLCSLLMTRTAVTELPENFGMLSNLRTLKM 1032

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
             K       P        LT+L + +    + L     NL  LK L  +   I       
Sbjct: 1033 AKHPD----PEATGEHTELTNLILQENPKPVVLLMSFSNLFMLKELDARAWKISGSISDF 1088

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERL 569
             +LSSLE L L  NN   +P SL  LS L +L L +    N+L  +P  L
Sbjct: 1089 EKLSSLEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSL 1138



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 380 GSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           G   + IPS +  L  K   L++LPS+ C  K LT L++ +  K+ER+     N +  E 
Sbjct: 618 GGNFKNIPSELKWLQWKGCPLKTLPSTFCPRK-LTVLDLSE-SKIERVWG-CHNKKVAEN 674

Query: 439 LRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           L V        + ++P       L KL L++C S  ++   +   ++L  L ++ C N +
Sbjct: 675 LMVMNLSGCNSLTDLPDVSGHQTLEKLILERCLSLVTIHKSVGDLRTLLHLNLMGCSNLL 734

Query: 495 RLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLV 553
             P ++  L +L++  + G T ++E+PE +  ++SL  L++    +  +P+S+ +L  L 
Sbjct: 735 EFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKKLE 794

Query: 554 SLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
              L + ++L+++P+ +  LSSL+ L L  + L+ +P+ + S 
Sbjct: 795 KFSLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGSL 837


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 192/414 (46%), Gaps = 54/414 (13%)

Query: 321  ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFC 376
            ++P  +GQL  L+ + L+    +    ++I  L+S+E++++S CSNLK FPE    I + 
Sbjct: 668  KVPSSIGQLTKLTFMSLRCSKNIRSFPTTI-DLQSLETLDLSGCSNLKIFPEVSRNIRYL 726

Query: 377  NIDGSGIERIPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             ++ + I+ +P S        VL +  C++LE +PS++   KSL  L +  CKKLE  P+
Sbjct: 727  YLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILSGCKKLESFPE 786

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
             L     L+ L ++ T +  +P +   L                       K+L  L   
Sbjct: 787  ILETTNHLQHLSLDETAMVNLPDTFCNL-----------------------KALNMLNFS 823

Query: 489  DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
            DC    +LP  + NL+ L  L   G  +  +P  L  LSS+  L LS +N   +P  +NQ
Sbjct: 824  DCSKLGKLPKNMKNLKSLAELRAGGCNLSTLPADLKYLSSIVELNLSGSNFDTMPAGINQ 883

Query: 549  LSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL 606
            LS L  + ++    L+ +PE L P   ++YL+  +  +L  I    + F     +     
Sbjct: 884  LSKLRWINVTGCKRLQSLPE-LPP--RIRYLNARDCRSLVSISGLKQLFELGCSNSLDDE 940

Query: 607  RLSVDLRNCLKLDPNELSEIIKDGWMK--QSVNGETYITKSMY--------FPGNEIPKW 656
                   NC KLD +  ++I+    +K      G  +  + +Y        +PG EIP+W
Sbjct: 941  TFV--FTNCFKLDQDNWADILASAQLKIQHFAMGRKHYDRELYDETFICFTYPGTEIPEW 998

Query: 657  FRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDDRKCNL 709
            F  +S GS+++++   P   N + +GF+ C+VVA      C +       KCN 
Sbjct: 999  FADKSIGSSVTIQHLPPDWLNHRFLGFSVCLVVAFDDRFLCEYPRGVVACKCNF 1052



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 175/379 (46%), Gaps = 65/379 (17%)

Query: 7   EIQINPYTFSKMTELRLLKF-----CGS-KNKCMVH---SLEGVPFTELRYFEWHQFPLK 57
           ++++N   F++++ L+ L       CG  + +C V     LE +P  +LRY  WH +PLK
Sbjct: 581 KLELNRNAFTRISNLKFLILRMSNNCGGFEEECKVQFPEGLESLP-QQLRYLYWHGYPLK 639

Query: 58  TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L    H  NL+ L  P S++  LW+                    K+P           
Sbjct: 640 FLPANFHPTNLIELNFPYSRLEGLWEG------------------DKVP----------- 670

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
                       SSI  L KL  + L   K++ S PT+I  + L+ L L GCSNLK  P+
Sbjct: 671 ------------SSIGQLTKLTFMSLRCSKNIRSFPTTIDLQSLETLDLSGCSNLKIFPE 718

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           + S ++R  L L    I+E+P SI+ LS +  L + +C  LE I S+IFKL+ L  + + 
Sbjct: 719 V-SRNIR-YLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILS 776

Query: 237 RCPNLQ-FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
            C  L+ F E+    ++ T   +     L L +     +LP   C  K+L  L   DC  
Sbjct: 777 GCKKLESFPEI----LETTNHLQH----LSLDETAMV-NLPDTFCNLKALNMLNFSDCSK 827

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             +LP  + NL++L  L   G  +  LP  L  L+ + +L L   S  + + + I +L  
Sbjct: 828 LGKLPKNMKNLKSLAELRAGGCNLSTLPADLKYLSSIVELNLSG-SNFDTMPAGINQLSK 886

Query: 356 VESIEISNCSNLKGFPEIP 374
           +  I ++ C  L+  PE+P
Sbjct: 887 LRWINVTGCKRLQSLPELP 905



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 122/228 (53%), Gaps = 16/228 (7%)

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           +SL +L++  C N +  P+   N++ L    ++ TAI+E+P  +  L+ L  L +KNC+E
Sbjct: 700 QSLETLDLSGCSNLKIFPEVSRNIRYL---YLNETAIQEVPLSIEHLSKLVVLNMKNCNE 756

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLES 401
           LE I S+IFKLKS+  + +S C  L+ FPEI         +E       L L++ + + +
Sbjct: 757 LECIPSTIFKLKSLGVLILSGCKKLESFPEI---------LETTNHLQHLSLDETA-MVN 806

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSK 460
           LP + C  K+L  L   DC KL +LP  + NL++L ELR  G  +  +P  L  L ++ +
Sbjct: 807 LPDTFCNLKALNMLNFSDCSKLGKLPKNMKNLKSLAELRAGGCNLSTLPADLKYLSSIVE 866

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           L L   S+F+++P+ +     L  + +  CK    LP+    + YL  
Sbjct: 867 LNLSG-SNFDTMPAGINQLSKLRWINVTGCKRLQSLPELPPRIRYLNA 913



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 28/237 (11%)

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI-- 251
           +++PSSI  L+ +  + +   K + +  ++I  LQ LE++ +  C NL+     S NI  
Sbjct: 667 DKVPSSIGQLTKLTFMSLRCSKNIRSFPTTI-DLQSLETLDLSGCSNLKIFPEVSRNIRY 725

Query: 252 ---DGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
              + T  +E P S         L +K C   E +PS     KSL  L +  C   E  P
Sbjct: 726 LYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILSGCKKLESFP 785

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           + L     L  L +D TA+  LP+    L  L+ L   +CS+L  +  ++  LKS+  + 
Sbjct: 786 EILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSKLGKLPKNMKNLKSLAELR 845

Query: 361 ISNC------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLP 403
              C      ++LK    I   N+ GS  + +P+ + +L+K        C +L+SLP
Sbjct: 846 AGGCNLSTLPADLKYLSSIVELNLSGSNFDTMPAGINQLSKLRWINVTGCKRLQSLP 902


>gi|297794607|ref|XP_002865188.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311023|gb|EFH41447.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 662

 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 183/356 (51%), Gaps = 15/356 (4%)

Query: 18  MTELRLL--KFCGSK--NKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKM 72
           M  +R L  K C SK  N  +  S + +P  +L+   W  +P++++      +NL+ +KM
Sbjct: 1   MRNIRFLEIKKCPSKEVNLHLPESFDYLP-PKLKLLCWPDYPMRSMPTTFSPKNLIKIKM 59

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
             SK+ +LW+ V +L  LK +DL     L ++PDL++A NLE L L +C SL +  SS+Q
Sbjct: 60  QFSKLEKLWEGVASLTCLKEMDLYGCAYLKEIPDLAMAANLETLILVFCVSLVKLSSSVQ 119

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
            LNKL  LD+  C SL +LPT I+ K L  L L+GC  L+NLP+++     S L L    
Sbjct: 120 NLNKLTTLDMKFCMSLETLPTFINLKSLNYLDLKGCLQLRNLPEISI--KISKLILNDTA 177

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS-CNI 251
           IE++P +++ L N+ EL + +    E +   +     L+++       LQ   MPS   +
Sbjct: 178 IEQIPCNLR-LENLVELQMRNLMG-EKLRKGVQPFMPLQAMLSPTLTKLQLENMPSLVEL 235

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
             +         L ++ C   E+LP+G    +SL +L    C      P+   N+ +L+ 
Sbjct: 236 PSSFQNLNQLKYLHIQYCINLETLPTG-INLQSLVNLNFKGCSRLRSFPEISTNISSLD- 293

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
             +D T I E+P  +   + L  L +  CS L+ +S  I KLK ++    S+C  L
Sbjct: 294 --LDETGIEEVPWWIENFSNLGLLSMDRCSRLKCVSLHISKLKHLKKAYSSDCGAL 347



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 17/185 (9%)

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           L  ENLV L+M      +L   VQ  + L+ +               L+  L  L L   
Sbjct: 185 LRLENLVELQMRNLMGEKLRKGVQPFMPLQAM---------------LSPTLTKLQLENM 229

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL E  SS Q LN+L+ L +  C +L +LPT I+ + L  L  +GCS L++ P++++  
Sbjct: 230 PSLVELPSSFQNLNQLKYLHIQYCINLETLPTGINLQSLVNLNFKGCSRLRSFPEISTN- 288

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
             S+L L   GIEE+P  I+  SN+G L +  C RL+ +S  I KL+ L+      C  L
Sbjct: 289 -ISSLDLDETGIEEVPWWIENFSNLGLLSMDRCSRLKCVSLHISKLKHLKKAYSSDCGAL 347

Query: 242 QFLEM 246
             +++
Sbjct: 348 TRVDL 352



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 200/455 (43%), Gaps = 75/455 (16%)

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           P L+ L  P   +    +   P + +K+K +  + E L  G      L  +++  C   +
Sbjct: 30  PKLKLLCWPDYPMRSMPTTFSPKNLIKIKMQFSKLEKLWEGVASLTCLKEMDLYGCAYLK 89

Query: 298 RLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +PD     NL+ L  +++   ++ +L   +  L  L+ L++K C  LE + + I  LKS
Sbjct: 90  EIPDLAMAANLETL--ILVFCVSLVKLSSSVQNLNKLTTLDMKFCMSLETLPTFI-NLKS 146

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           +  +++  C  L+  PEI            I  S L LN  + +E +P +L         
Sbjct: 147 LNYLDLKGCLQLRNLPEI-----------SIKISKLILND-TAIEQIPCNL--------- 185

Query: 416 EIIDCKKLERLPD-ELGNLEALEELRVEGTGIREVPKSLAQLA--LSKLKLKKCSSFESL 472
                 +LE L + ++ NL   E+LR    G++      A L+  L+KL+L+   S   L
Sbjct: 186 ------RLENLVELQMRNLMG-EKLR---KGVQPFMPLQAMLSPTLTKLQLENMPSLVEL 235

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLE- 530
           PS       L  L I  C N   LP  I NL+ L  L  KG + +R  PE    +SSL+ 
Sbjct: 236 PSSFQNLNQLKYLHIQYCINLETLPTGI-NLQSLVNLNFKGCSRLRSFPEISTNISSLDL 294

Query: 531 ---------WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP-LSSLKYLDL 580
                    W + + +NL ++  S+++ S L  + L  + L+ + +       +L  +DL
Sbjct: 295 DETGIEEVPWWIENFSNLGLL--SMDRCSRLKCVSLHISKLKHLKKAYSSDCGALTRVDL 352

Query: 581 --FENNLDRI--PEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
             +E+ ++ +      +   +S+P    S    ++  NC  LDP  +            +
Sbjct: 353 SGYESGVEMMEADNMSKEASSSLPD---SCVPDLNFWNCFNLDPETI------------L 397

Query: 637 NGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTP 671
             ++ I   M FPG E+P +F H++TG + SL  P
Sbjct: 398 RQQSIIFNYMIFPGKEVPSYFTHRTTGIS-SLTIP 431


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 171/661 (25%), Positives = 304/661 (45%), Gaps = 87/661 (13%)

Query: 43  FTELRYFEWHQFPLKTLNILHWENLV---SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSK 99
           FTE R+ +     +KTL     ++ V   S     S +  + +D    V ++ +DL + K
Sbjct: 136 FTE-RFLQSKTADIKTLQPQFDDDEVASTSTYTQKSLIQSVQEDTATCVEME-LDLSHKK 193

Query: 100 LLT-KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS- 157
             +  L  L L ++L IL+L + S LT   S I   ++L+ LDL   K ++ +P S+++ 
Sbjct: 194 HKSIDLSRLGLYKDLRILNLKH-SELTIVPSEIGECHELQKLDLSFNK-ISKIPESLYAL 251

Query: 158 KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
           + L  L +R  + L ++P ++       TL L    IE++P+S+  L  + EL + S   
Sbjct: 252 EQLTELNMRSNA-LTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGS-NA 309

Query: 217 LENISSSIFKLQFLESI-----RIHRCPN----LQFLEMPSCNIDGTRSKEQPSSELKLK 267
           L +I   I KL+ +E++     +I + P+    L+ L     N +   S      +LK  
Sbjct: 310 LTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSM 369

Query: 268 KC-----PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           K       + E +P+  C  + LT L++        +PDE+  L+++N L +D   + ++
Sbjct: 370 KTLNLSSNKIEKIPASLCTLEQLTELDM-KYNALTAIPDEISKLKSMNILNLDNNKMEKI 428

Query: 323 PEGLGQLALLSKLELKN-----CSELEYISSSIFKLKSVESIEISNCSNLKGFP------ 371
           P+ L  L  L++L++ +      + L  I   I KLKS++ + + N + +K  P      
Sbjct: 429 PDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDN-NKMKKIPASLCAL 487

Query: 372 -EIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEI------ 417
            ++    ++G+ +  IP  + KL          +K++ +P SLC  + LT L +      
Sbjct: 488 QQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALT 547

Query: 418 ----------------IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSK 460
                           +D  K++++P  L  L+ L EL + G  +  +P  + +L ++  
Sbjct: 548 SIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMET 607

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L   +  E +P  L   + LT L +        +PDEIG L+ +K L +    I ++P
Sbjct: 608 LNLS-FNKIEKIPDSLCALEQLTELNM-RSNALTSVPDEIGKLKSMKTLNLSSNKIEKIP 665

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
            SL  L  L  L++  N L  IP+ +++L S+  L L NN +E+IP+ L  L  L  LD+
Sbjct: 666 ASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDI 725

Query: 581 FENNLDRIPEYLRSFPT------------SIPSEFTSLRLSVDL---RNCLKLDPNELSE 625
             N L  IP+ +    +             IP    +L    DL    N L   P+E+ +
Sbjct: 726 RSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGK 785

Query: 626 I 626
           +
Sbjct: 786 L 786



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 276/566 (48%), Gaps = 49/566 (8%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           E L  L M  + +T + D++  L S+K ++L  +K+  K+P  L   + L  L++G  ++
Sbjct: 252 EQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKI-EKIPASLCALEKLTELNMG-SNA 309

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCH 181
           LT     I  L  +E LDL   K +  +P S+ + + L  L +   + L ++P ++    
Sbjct: 310 LTSIPDEIGKLKSMETLDLSFNK-IDKIPDSLCALEKLTELYMNDNA-LTSVPDEIGKLK 367

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGEL-LIYSCKRLENISSSIFKLQF-----LESIRI 235
              TL L    IE++P+S+  L  + EL + Y+   L  I   I KL+      L++ ++
Sbjct: 368 SMKTLNLSSNKIEKIPASLCTLEQLTELDMKYNA--LTAIPDEISKLKSMNILNLDNNKM 425

Query: 236 HRCPN-------LQFLEMPSCNIDGTRSKEQPSSEL-KLKKCP-------RPESLPSGQC 280
            + P+       L  L+M       + +      E+ KLK          + + +P+  C
Sbjct: 426 EKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLC 485

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             + LT L  ++      +PDE+  L+++  L +    I ++P+ L  L  L++L + + 
Sbjct: 486 ALQQLTEL-YMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMAS- 543

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKL 393
           + L  I   I KLKS++ + + N + +K  P       ++    ++G+ +  IP  + KL
Sbjct: 544 NALTSIPDEISKLKSMKILNLDN-NKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKL 602

Query: 394 NKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                     +K+E +P SLC  + LT L +     L  +PDE+G L++++ L +    I
Sbjct: 603 KSMETLNLSFNKIEKIPDSLCALEQLTELNM-RSNALTSVPDEIGKLKSMKTLNLSSNKI 661

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            ++P SL  L      + + ++  ++P  +   KS+  L + D     ++PD +  L+ L
Sbjct: 662 EKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNL-DNNKMEKIPDSLCALQQL 720

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
             L I+  A+  +P+ +G+L S++ L L +N ++ IP+SL  L  L  L + +N L  IP
Sbjct: 721 TELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIP 780

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYL 592
           + +  L S+  L+L  N +++IP+ L
Sbjct: 781 DEIGKLKSMTTLNLSFNKIEKIPDSL 806



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 263/576 (45%), Gaps = 91/576 (15%)

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS-S 123
            + L  L M G+ +T + D++  L S+K ++L ++K+  K+PD SL    ++ +L   S +
Sbjct: 488  QQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKI-DKIPD-SLCALEKLTELNMASNA 545

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCH 181
            LT     I  L  +++L+LD  K +  +P S+ + + L  L + G + L ++P ++    
Sbjct: 546  LTSIPDEISKLKSMKILNLDNNK-MKKIPASLCALQQLTELYMNGNA-LTSIPDEIGKLK 603

Query: 182  LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               TL L    IE++P S+  L  + EL + S   L ++   I KL+ ++++ +      
Sbjct: 604  SMETLNLSFNKIEKIPDSLCALEQLTELNMRS-NALTSVPDEIGKLKSMKTLNL------ 656

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
                  S N                    + E +P+  C    LT L I+       +PD
Sbjct: 657  ------SSN--------------------KIEKIPASLCALDQLTEL-IMRSNALTAIPD 689

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            E+  L+++  L +D   + ++P+ L  L  L++L++++ + L  I   I KLKS++ + +
Sbjct: 690  EISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRS-NALTSIPDEIGKLKSMKILNL 748

Query: 362  SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCS-------KLESLPSSLC 407
             N + ++  P+       +   N++ + +  IP  + KL   +       K+E +P SLC
Sbjct: 749  DN-NKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLC 807

Query: 408  MFKSLTSLEIIDCK----KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
                +  L++I  +    KL+  P ++     L EL + G  ++ VP  + +L L     
Sbjct: 808  --AGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRL-LRYHPC 864

Query: 464  KKCSSFESLPSR---LYVSKSL-----------TSLEIIDCKNFMRLP------------ 497
            +KC     +  R   +Y   S            T L   D    + +             
Sbjct: 865  RKCKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSID 924

Query: 498  -DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
               +G+ ++L++L ++   +  VP  +G+   L+ L LS N +  IP+SL  L  L  + 
Sbjct: 925  LSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEIN 984

Query: 557  LSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            + +N L  IP+ +  L S+K L+L  N + +IP+ L
Sbjct: 985  MGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSL 1020



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 15/196 (7%)

Query: 426  LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            +P E+G    L++L +    I ++P SL  L  L+++ +   ++  S+P  +   KS+ +
Sbjct: 947  VPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMG-SNALTSIPDEISKLKSMKT 1005

Query: 485  LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI--- 541
            L +       ++PD +  LE L++L + G A+  +P    Q  +L+     DN   +   
Sbjct: 1006 LNL-SFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDI----DNGASVFSL 1060

Query: 542  ---IPESLNQLSSLVSLKLSNNNLERIP-ERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
               + E + +L  L+ L+L++N L+  P + ++ L SL  L L  N L  +P+++     
Sbjct: 1061 CFGMSERIKKLK-LIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPDHIGRLLR 1119

Query: 598  SIPSEFTSLRLSVDLR 613
              P E    RL +  R
Sbjct: 1120 YHPCEVCEHRLRMHYR 1135



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 365  SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEI 417
            S L  +  +   N++   +  +PS + + +K  KLE        +P SLC  + LT + +
Sbjct: 926  SRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINM 985

Query: 418  IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
                 L  +PDE+  L++++ L +    I ++P SL  L   ++     ++  ++PS   
Sbjct: 986  -GSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPS--- 1041

Query: 478  VSKSLTSLEIIDCKNFMRL----PDEIGNLEYLKVLTIKGTAIREVP-ESLGQLSSLEWL 532
            V     +L+I +  +   L     + I  L+ ++ L +    ++E P + + +L SL  L
Sbjct: 1042 VKLQHQTLDIDNGASVFSLCFGMSERIKKLKLIR-LQLNDNKLKEFPWQIIEELHSLYKL 1100

Query: 533  VLSDNNLQIIPESLNQL 549
             L  N LQ +P+ + +L
Sbjct: 1101 SLCGNELQTVPDHIGRL 1117


>gi|227438223|gb|ACP30601.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 190/381 (49%), Gaps = 34/381 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKN------KCMVHSLEGVPFT--ELRYFEWHQFPLKT 58
           E+ ++   F  M  LR L+    K       +  +H  E   +   +L+  +W  +P++ 
Sbjct: 545 ELNVHENAFKGMRNLRFLEIHSKKRYEIGNEEVTIHLPENFDYLPPKLKILDWFGYPMRC 604

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +    E LV LKM  SK+ +LW+ + +L  LK +D+  S  L ++PDLS A NLE L 
Sbjct: 605 LPSKFRPEKLVKLKMVNSKLEKLWEGIVSLTCLKEMDMWGSTNLIEMPDLSKATNLETLK 664

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L  C SL +  SSI + NKL+ LDL  C+++ ++PT I  K LK L  +GCS ++  P++
Sbjct: 665 LRKCYSLVKLPSSIPHPNKLKKLDLRNCRNVETIPTGISLKSLKDLNTKGCSRMRTFPQI 724

Query: 178 TSCHLRSTLPLLGVGIEELPSSIK-CLSNIGELLIYSCKRLE---NISSSIF---KLQFL 230
           +S      + +    IEE+ S++  C  N+    ++S K+L     +   +F   K    
Sbjct: 725 SST--IEDVDIDATFIEEIRSNLSLCFENLHTFTMHSPKKLWERVQVCYIVFIGGKKSSA 782

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS--------SELKLKKCPRPESLPSGQCMF 282
           E   ++  P+L  L++     D     E PS        S LK++ C   E+LP+G    
Sbjct: 783 EYDFVYLSPSLWHLDLS----DNPGLVELPSSFKNLHNLSRLKIRNCVNLETLPTG-INL 837

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            SL+ +++  C      P    N+Q L+   +  T I E+P  + + + L+ L++K C+ 
Sbjct: 838 GSLSRVDLSGCSRLRTFPQISTNIQELD---LSETGIEEVPCWIEKFSRLNSLQMKGCNN 894

Query: 343 LEYISSSIFKLKSVESIEISN 363
           LEY++ +I   KS+     +N
Sbjct: 895 LEYVNLNISDCKSLTGASWNN 915



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 186/450 (41%), Gaps = 91/450 (20%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           NF+ LP +L  L         G  +R LP       L+ KL++ N S+LE +   I  L 
Sbjct: 584 NFDYLPPKLKILDWF------GYPMRCLPSKFRPEKLV-KLKMVN-SKLEKLWEGIVSLT 635

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            ++ +++   +NL   P++       + +E      LKL KC  L  LPSS+     L  
Sbjct: 636 CLKEMDMWGSTNLIEMPDLS----KATNLE-----TLKLRKCYSLVKLPSSIPHPNKLKK 686

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK---SLAQLALSKLKLKKCSS-- 468
           L++ +C+ +E +P  + +L++L++L  +G + +R  P+   ++  + +    +++  S  
Sbjct: 687 LDLRNCRNVETIPTGI-SLKSLKDLNTKGCSRMRTFPQISSTIEDVDIDATFIEEIRSNL 745

Query: 469 ---FESL-------PSRL------------------------YVSKSLTSLEIIDCKNFM 494
              FE+L       P +L                        Y+S SL  L++ D    +
Sbjct: 746 SLCFENLHTFTMHSPKKLWERVQVCYIVFIGGKKSSAEYDFVYLSPSLWHLDLSDNPGLV 805

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLV 553
            LP    NL  L  L I+     E   +   L SL  + LS  + L+  P    Q+S+ +
Sbjct: 806 ELPSSFKNLHNLSRLKIRNCVNLETLPTGINLGSLSRVDLSGCSRLRTFP----QISTNI 861

Query: 554 S-LKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI------------PEYLRSFPTSI 599
             L LS   +E +P  ++  S L  L +   NNL+ +              +      S 
Sbjct: 862 QELDLSETGIEEVPCWIEKFSRLNSLQMKGCNNLEYVNLNISDCKSLTGASWNNHPRESA 921

Query: 600 PSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
            S + S  + +D   CL L    L +             +TY    +   G E+P +F H
Sbjct: 922 LSYYHSFDIGIDFTKCLNLVQEALFQ------------KKTYFGCQLKLSGEEVPSYFTH 969

Query: 660 QSTGSTISLKTP--QPTGYNKLMGFAFCVV 687
           ++TG++ SL  P    +     + F  C+V
Sbjct: 970 RTTGTSSSLTIPLLHSSLTQPFLRFRACIV 999


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 253/543 (46%), Gaps = 70/543 (12%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
            + + +N   F KM  LRLL     +N      +E +P   L++ +WH FP  TL +    
Sbjct: 558  TRLGVNSQAFRKMKNLRLLIV---QNARFSTKIEYLP-DSLKWIKWHGFPQPTLPSCFIT 613

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE---------- 114
            +NLV L +  S +      +++   LK +DL +S  L K+P+ S A NLE          
Sbjct: 614  KNLVGLDLQYSFMKTFGKRLEDCKRLKHVDLSHSTFLEKIPNFSAASNLEELYLINCKNL 673

Query: 115  --------------ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
                          IL+L  CS+L +       L  L  L+L  CK L  +P    +  L
Sbjct: 674  GMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLEKIPDFSAASNL 733

Query: 161  KRLVLRGCSNLKNLPK-MTSCHLRSTLPL-LGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
            + L L  C+NL+ + K + S H  + L L +   +++LP+S   L ++  L +  CK+LE
Sbjct: 734  EELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLE 793

Query: 219  NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
             I   +     L+S+ +H C NL+ +        G+  K     ++ L  C     LP+ 
Sbjct: 794  KI-PDLSAASNLQSLCLHECTNLRLIHESV----GSLYK---LIDMDLSGCTNLAKLPT- 844

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
                KSL  L + +C   E  P    N+++L  L +D TAI+ELP  +G L  L +L L 
Sbjct: 845  YLRLKSLRYLGLSECCKLESFPSIAENMESLRELDMDFTAIKELPSSIGYLTQLYRLNLT 904

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPE------IPFCNIDGSGIERIPSSVLK 392
             C+ L  + ++I+ L++++ + +S CS  + FP        P C+         PS +++
Sbjct: 905  GCTNLISLPNTIYLLRNLDKLLLSGCSRFEMFPHKWDPTIQPVCS---------PSKMME 955

Query: 393  LNKCSKLES---LPS-SLCMFKSLTSLE---IIDCKKLERLPDELGNLEALEELRVEGTG 445
                S LE    LP+ SLC   +L  L+   I + K LE L D       L +LR+    
Sbjct: 956  ATSWS-LEYPHLLPNESLCSHFTLLDLQSCNISNAKFLEILCDV---APFLSDLRLSENK 1011

Query: 446  IREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
               +P  L + ++L  L+LK C   + +P+   + +++ +L+   CK+  R PD I ++ 
Sbjct: 1012 FSSLPSCLHKFMSLWNLELKNCKFLQEIPN---LPQNIQNLDASGCKSLARSPDNIMDII 1068

Query: 505  YLK 507
             +K
Sbjct: 1069 SIK 1071



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 237/529 (44%), Gaps = 65/529 (12%)

Query: 175  PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI- 233
            P + SC +   L    VG++   S +K      E     CKRL+++  S     FLE I 
Sbjct: 605  PTLPSCFITKNL----VGLDLQYSFMKTFGKRLE----DCKRLKHVDLS--HSTFLEKIP 654

Query: 234  RIHRCPNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKCPRPESLPSGQCMFKSLTSLE 289
                  NL+ L + +C   G   K   S +    L L  C   + LP G  + +SL  L 
Sbjct: 655  NFSAASNLEELYLINCKNLGMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLN 714

Query: 290  IIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
            +  C   E++PD     NL+ L   + + T +R + + +  L  L+ L L  CS L+ + 
Sbjct: 715  LSHCKKLEKIPDFSAASNLEEL--YLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLP 772

Query: 348  SSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV--------LK 392
            +S +KL S++ + +S C  L+  P++         C  + + +  I  SV        + 
Sbjct: 773  TSYYKLWSLQYLNLSYCKKLEKIPDLSAASNLQSLCLHECTNLRLIHESVGSLYKLIDMD 832

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L+ C+ L  LP+ L   KSL  L + +C KLE  P    N+E+L EL ++ T I+E+P S
Sbjct: 833  LSGCTNLAKLPTYL-RLKSLRYLGLSECCKLESFPSIAENMESLRELDMDFTAIKELPSS 891

Query: 453  LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG-NLEYL---- 506
            +  L  L +L L  C++  SLP+ +Y+ ++L  L +  C  F   P +    ++ +    
Sbjct: 892  IGYLTQLYRLNLTGCTNLISLPNTIYLLRNLDKLLLSGCSRFEMFPHKWDPTIQPVCSPS 951

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVLSD------NNLQIIPESLNQLSSLVSLKLSNN 560
            K++     ++ E P  L   S      L D      +N + +    +    L  L+LS N
Sbjct: 952  KMMEATSWSL-EYPHLLPNESLCSHFTLLDLQSCNISNAKFLEILCDVAPFLSDLRLSEN 1010

Query: 561  NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC--LKL 618
                +P  L    SL  L+L      +  ++L+  P ++P    +L    D   C  L  
Sbjct: 1011 KFSSLPSCLHKFMSLWNLEL------KNCKFLQEIP-NLPQNIQNL----DASGCKSLAR 1059

Query: 619  DPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
             P+ + +II    +KQ +  +  I++     G EIP+WF +++  +  S
Sbjct: 1060 SPDNIMDIIS---IKQDLAMDE-ISREFLLTGIEIPEWFSYKTASNLAS 1104



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 182/389 (46%), Gaps = 43/389 (11%)

Query: 193 IEELPSSIKCLSNIG--ELLIYSCKRLENISSSIFKLQFLESI--RIHRCPNLQFLEMPS 248
           IE LP S+K +   G  +  + SC   +N+     +  F+++   R+  C  L+ +++  
Sbjct: 587 IEYLPDSLKWIKWHGFPQPTLPSCFITKNLVGLDLQYSFMKTFGKRLEDCKRLKHVDL-- 644

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
                       S    L+K P   +         +L  L +I+C N   +   + +L  
Sbjct: 645 ------------SHSTFLEKIPNFSAA-------SNLEELYLINCKNLGMIDKSVFSLDK 685

Query: 309 LNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           L  L + G + +++LP G   L  L  L L +C +LE I        ++E + + NC+NL
Sbjct: 686 LTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLEKIPD-FSAASNLEELYLFNCTNL 744

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           +         ID S       ++L L+ CS L+ LP+S     SL  L +  CKKLE++P
Sbjct: 745 RM--------IDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIP 796

Query: 428 D--ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           D     NL++L     E T +R + +S+  L  L  + L  C++   LP+ L + KSL  
Sbjct: 797 DLSAASNLQSL--CLHECTNLRLIHESVGSLYKLIDMDLSGCTNLAKLPTYLRL-KSLRY 853

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
           L + +C      P    N+E L+ L +  TAI+E+P S+G L+ L  L L+   NL  +P
Sbjct: 854 LGLSECCKLESFPSIAENMESLRELDMDFTAIKELPSSIGYLTQLYRLNLTGCTNLISLP 913

Query: 544 ESLNQLSSLVSLKLSN-NNLERIPERLDP 571
            ++  L +L  L LS  +  E  P + DP
Sbjct: 914 NTIYLLRNLDKLLLSGCSRFEMFPHKWDP 942


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 179/373 (47%), Gaps = 56/373 (15%)

Query: 15  FSKMTELRLLKFCG-SKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSL 70
           F KM  LR LKF   S  +C V    G+     +LRY  W  +PLK+L +    E LV L
Sbjct: 553 FVKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVEL 612

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSS 130
            MP S+V +LW+ VQ+L +LK++DL   + L +LPD S+A NL+ ++L  C  L   H+S
Sbjct: 613 YMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHVHAS 672

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KMTSCHLRSTL 186
           I  L KL  L+L  CK+L SL ++     L+ L L GCS+LK       +MT   LR T 
Sbjct: 673 ILSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCT- 731

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP-----NL 241
                 I ELP S+K L  +  L + SC RL N+ +    L+ L  + +  C      NL
Sbjct: 732 -----AINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNL 786

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
             L       DG R                            SL  L + +C N   LP 
Sbjct: 787 HLL------FDGLR----------------------------SLGYLCLDNCCNLTELPH 812

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            +  L +L  L + G+ ++ +P+ +  L+ L  L+L  C  ++Y+        S+E +++
Sbjct: 813 NISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQYLPE---LPPSIEVLDV 869

Query: 362 SNCSNLKGFPEIP 374
           +NC++L+     P
Sbjct: 870 TNCTSLETVFTCP 882



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 110/497 (22%), Positives = 221/497 (44%), Gaps = 95/497 (19%)

Query: 341  SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
            S ++ +   +  L +++ +++S C NL   P+        S ++ +      L++C +L 
Sbjct: 617  SRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSM----ASNLQTV-----NLSRCVRLR 667

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGN--LEALEELRVEG-TGIREVPKSLAQLA 457
             + +S+   + L +L ++ CK L+ L   L N  L +L  L + G + ++E   +  ++ 
Sbjct: 668  HVHASILSLQKLVNLNLVWCKNLKSL---LSNTPLNSLRILELYGCSSLKEFSVTSEEMT 724

Query: 458  LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
               L+   C++   LP  +     L +LE+  C     LP+E   L+ L  L +    + 
Sbjct: 725  YLDLR---CTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLL 781

Query: 518  EVPES---LGQLSSLEWLVLSDN--NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
            +          L SL +L L DN  NL  +P +++ LSSL  L LS +N++ IP+ +  L
Sbjct: 782  DTSNLHLLFDGLRSLGYLCL-DNCCNLTELPHNISLLSSLYYLSLSGSNVKNIPKSIKHL 840

Query: 573  SSLKYLDLFE-NNLDRIPEYLRSFP-------TSIPSEFT---------SLRLSVDLRNC 615
            S L+ LDL +  ++  +PE   S         TS+ + FT           ++ +  +NC
Sbjct: 841  SQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKNC 900

Query: 616  LKLDPNELSEIIKDG-------------------------WMKQSVNGETYITKSMYFPG 650
            ++L+    + I+ D                          + K       +   ++  PG
Sbjct: 901  VELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICPG 960

Query: 651  NEIPKWFRHQSTGSTISLK-----TPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDR 705
            + +P WF ++ST ++I+++     +PQ    + + GF FC+++          +S+ +++
Sbjct: 961  SRVPDWFHYRSTEASITIELSVSHSPQ----SNIFGFIFCLILP---------QSLPNEK 1007

Query: 706  KCNLFDVVCDRRSEGYDSY-TSSYLGKISHVESDHVFLGS------SIFAGENSCKRSDE 758
              N + + C+   EG ++   +S     + + SDHV+L         +F      + +D+
Sbjct: 1008 NLN-WKIGCECYMEGGENIRNTSMCSFATGLVSDHVYLWYDENFCFDMFNTTGKSRTNDD 1066

Query: 759  FFFHIDRSCCEVKKCGI 775
            +    D+    +K+CGI
Sbjct: 1067 Y---SDKMNVVIKECGI 1080


>gi|357462141|ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1545

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 171/356 (48%), Gaps = 29/356 (8%)

Query: 6    SEIQINPYTFSKMTELRLLKFC----------GSKNKCMVHSLEGVPF--TELRYFEWHQ 53
             ++ ++  +F  MT LR L             G     +VH  EG+ +   +LRY +W  
Sbjct: 988  GDLYLSSASFKSMTNLRYLHILNSLHNIFLTNGRNEGSIVHLHEGLEWLSDKLRYLKWES 1047

Query: 54   FPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
            FPL +L      ENLV L M  SK+ +LWD +Q L +L +I+L YSK L ++PDLS A N
Sbjct: 1048 FPLNSLPASFCAENLVQLSMTNSKLKKLWDGIQKLDNLMKIELDYSKDLVEIPDLSRAPN 1107

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
            LE++ L YC +L + H SI    KL  L LD CK + SL T+IHSK L+ L L  CS+L 
Sbjct: 1108 LELVSLSYCENLCKLHESILTAPKLSYLRLDGCKKIKSLKTNIHSKSLESLSLNNCSSLV 1167

Query: 173  NLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
                    MT  +L  T       I+ELPSS+     +  L +  CK+L     ++    
Sbjct: 1168 EFSVTSENMTGLYLSCT------AIQELPSSMWRNRKLTHLNLSKCKKLNIAEKNLPNDP 1221

Query: 229  FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
             LES+    C      ++ + N+       +    L++  C   ESLP        L  L
Sbjct: 1222 GLESLIF--CDLSGCTQINTWNLWFIFHFIRSVKHLRMVNCCNLESLPDNIQNISMLEWL 1279

Query: 289  EIIDCPNFE---RLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNC 340
             + +C   +   +LP  L NL A N + +D G+  R + E + Q  L +  +  NC
Sbjct: 1280 CLDECRKLKFIPKLPVSLRNLSAANCIYVDTGSVQRSMLENMIQRHLTNFRDRSNC 1335



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 46/261 (17%)

Query: 287  SLEIIDCPNFERLPD-ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            S ++++ P+  R P+ EL +L     L        +L E +     LS L L  C +++ 
Sbjct: 1093 SKDLVEIPDLSRAPNLELVSLSYCENLC-------KLHESILTAPKLSYLRLDGCKKIKS 1145

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
            + ++I   KS+ES+ ++NCS+L  F  +   N+ G          L L+ C+ ++ LPSS
Sbjct: 1146 LKTNIHS-KSLESLSLNNCSSLVEFS-VTSENMTG----------LYLS-CTAIQELPSS 1192

Query: 406  LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
            +   + LT L +  CKKL      L N   LE L                       L  
Sbjct: 1193 MWRNRKLTHLNLSKCKKLNIAEKNLPNDPGLESLIF-------------------CDLSG 1233

Query: 466  CSSFES--LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI----KGTAIREV 519
            C+   +  L    +  +S+  L +++C N   LPD I N+  L+ L +    K   I ++
Sbjct: 1234 CTQINTWNLWFIFHFIRSVKHLRMVNCCNLESLPDNIQNISMLEWLCLDECRKLKFIPKL 1293

Query: 520  PESLGQLSSLEWLVLSDNNLQ 540
            P SL  LS+   + +   ++Q
Sbjct: 1294 PVSLRNLSAANCIYVDTGSVQ 1314



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 68/336 (20%)

Query: 397  SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD-------ELGNLEALEELRVEGTGIREV 449
            SKL+ L   +    +L  +E+   K L  +PD       EL +L   E L      I   
Sbjct: 1070 SKLKKLWDGIQKLDNLMKIELDYSKDLVEIPDLSRAPNLELVSLSYCENLCKLHESILTA 1129

Query: 450  PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            PK      LS L+L  C   +SL + ++ SKSL SL + +C + +         E +  L
Sbjct: 1130 PK------LSYLRLDGCKKIKSLKTNIH-SKSLESLSLNNCSSLVEFS---VTSENMTGL 1179

Query: 510  TIKGTAIREVPESLGQ--------LSSLEWLVLSDNNLQIIP--ESL------------- 546
             +  TAI+E+P S+ +        LS  + L +++ NL   P  ESL             
Sbjct: 1180 YLSCTAIQELPSSMWRNRKLTHLNLSKCKKLNIAEKNLPNDPGLESLIFCDLSGCTQINT 1239

Query: 547  -------NQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPT 597
                   + + S+  L++ N  NLE +P+ +  +S L++L L E   L  IP+       
Sbjct: 1240 WNLWFIFHFIRSVKHLRMVNCCNLESLPDNIQNISMLEWLCLDECRKLKFIPK------- 1292

Query: 598  SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG----ETYITKSMYFPGNEI 653
             +P    SLR ++   NC+ +D   +   + +  +++ +           +  + PG++I
Sbjct: 1293 -LP---VSLR-NLSAANCIYVDTGSVQRSMLENMIQRHLTNFRDRSNCFQEFFFLPGDQI 1347

Query: 654  PKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
            P  F  QST ++I +    P   + L    FC++ +
Sbjct: 1348 PCEFYFQSTEASIVIP---PIPKSDLCCLIFCIIFS 1380


>gi|297809509|ref|XP_002872638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318475|gb|EFH48897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 19/306 (6%)

Query: 11  NPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWE 65
           NP  F KM  LRLLK   SK   K  V+  +G+ +  ++LR   W  +PL +L    + E
Sbjct: 529 NPNVFEKMCNLRLLKLYCSKVEEKHGVYFPQGLEYLPSKLRLLHWEFYPLSSLPESFNPE 588

Query: 66  NLVSLKMPGSKVTQLWDDVQ----NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           NLV L +  S   +LW   +    +L +LK++ L YS  LTK+P LS A NLE +DL  C
Sbjct: 589 NLVELNLSSSCARKLWKGKKARFLSLGNLKKMKLSYSYQLTKIPRLSSAPNLEHIDLEGC 648

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           +SL     S+ YL K+  L+L  C  L S+P+++  + L+ L L GCS L+N P+++   
Sbjct: 649 NSLLSISQSVSYLKKIVFLNLKGCSKLESIPSTVDLESLEVLNLSGCSKLENFPEISPNV 708

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L + G  I+E+PSSIK L  + +L + + + L+N+ +SI KL+ LE++ +  C +L
Sbjct: 709 --KELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSL 766

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           +     S  +   R  +   + ++         LPS      +L  L  +DC N  RLPD
Sbjct: 767 ERFPDLSRRMKCLRFLDLSRTAVR--------ELPSSISYLTALEELRFVDCKNLVRLPD 818

Query: 302 ELGNLQ 307
               L+
Sbjct: 819 NAWTLR 824



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 14/187 (7%)

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-PFCN---IDGSGIERIPSSV 390
           L LK CS+LE I S++  L+S+E + +S CS L+ FPEI P      + G+ I+ +PSS+
Sbjct: 667 LNLKGCSKLESIPSTV-DLESLEVLNLSGCSKLENFPEISPNVKELYMGGTMIQEVPSSI 725

Query: 391 --------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                   L L     L++LP+S+C  K L +L +  C  LER PD    ++ L  L + 
Sbjct: 726 KNLVLLEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLS 785

Query: 443 GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            T +RE+P S++ L AL +L+   C +   LP   +  +       ID + F RL +  G
Sbjct: 786 RTAVRELPSSISYLTALEELRFVDCKNLVRLPDNAWTLRFKVEFRQIDTEKFSRLWNRFG 845

Query: 502 NLEYLKV 508
            L+ +++
Sbjct: 846 WLKKVQI 852



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 19/221 (8%)

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQC 280
           +  Q  +  R+   PNL+ +++  CN    I  + S  +    L LK C + ES+PS   
Sbjct: 624 YSYQLTKIPRLSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSKLESIPS-TV 682

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             +SL  L +  C   E  P+   N++    L + GT I+E+P  +  L LL KL+L+N 
Sbjct: 683 DLESLEVLNLSGCSKLENFPEISPNVK---ELYMGGTMIQEVPSSIKNLVLLEKLDLENS 739

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKL 399
             L+ + +SI KLK +E++ +S C++L+ FP++           R+     L L++ +  
Sbjct: 740 RHLKNLPTSICKLKHLETLNLSGCTSLERFPDLS---------RRMKCLRFLDLSRTAVR 790

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
           E LPSS+    +L  L  +DCK L RLPD    L    E R
Sbjct: 791 E-LPSSISYLTALEELRFVDCKNLVRLPDNAWTLRFKVEFR 830



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%)

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSV--------LKLNKCSKLESL 402
           K+K   S +++    L   P +   +++G + +  I  SV        L L  CSKLES+
Sbjct: 619 KMKLSYSYQLTKIPRLSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSKLESI 678

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL-SKL 461
           PS++ + +SL  L +  C KLE  P+   N++   EL + GT I+EVP S+  L L  KL
Sbjct: 679 PSTVDL-ESLEVLNLSGCSKLENFPEISPNVK---ELYMGGTMIQEVPSSIKNLVLLEKL 734

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
            L+     ++LP+ +   K L +L +  C +  R PD    ++ L+ L +  TA+RE+P 
Sbjct: 735 DLENSRHLKNLPTSICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPS 794

Query: 522 SLGQLSSLEWLVLSD-NNLQIIPES 545
           S+  L++LE L   D  NL  +P++
Sbjct: 795 SISYLTALEELRFVDCKNLVRLPDN 819



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 26/231 (11%)

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
           +L ++P  L +   LE + +EG   +  + +S++ L  +  L LK CS  ES+PS + + 
Sbjct: 627 QLTKIP-RLSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSKLESIPSTVDL- 684

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-N 538
           +SL  L +  C      P+   N+   K L + GT I+EVP S+  L  LE L L ++ +
Sbjct: 685 ESLEVLNLSGCSKLENFPEISPNV---KELYMGGTMIQEVPSSIKNLVLLEKLDLENSRH 741

Query: 539 LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRS 594
           L+ +P S+ +L  L +L LS   +LER P+    +  L++LDL    +  +P    YL +
Sbjct: 742 LKNLPTSICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSSISYLTA 801

Query: 595 FP----------TSIPSEFTSLRLSVDLRNCLKLDPNELSEII-KDGWMKQ 634
                         +P    +LR  V+ R   ++D  + S +  + GW+K+
Sbjct: 802 LEELRFVDCKNLVRLPDNAWTLRFKVEFR---QIDTEKFSRLWNRFGWLKK 849


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 179/373 (47%), Gaps = 56/373 (15%)

Query: 15  FSKMTELRLLKFCG-SKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSL 70
           F KM  LR LKF   S  +C V    G+     +LRY  W  +PLK+L +    E LV L
Sbjct: 553 FVKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVEL 612

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSS 130
            MP S+V +LW+ VQ+L +LK++DL   + L +LPD S+A NL+ ++L  C  L   H+S
Sbjct: 613 YMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASNLQTVNLSRCVRLRHVHAS 672

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KMTSCHLRSTL 186
           I  L KL  L+L  CK+L SL ++     L+ L L GCS+LK       +MT   LR T 
Sbjct: 673 ILSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCT- 731

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP-----NL 241
                 I ELP S+K L  +  L + SC RL N+ +    L+ L  + +  C      NL
Sbjct: 732 -----AINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNL 786

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
             L       DG R                            SL  L + +C N   LP 
Sbjct: 787 HLL------FDGLR----------------------------SLGYLCLDNCCNLTELPH 812

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            +  L +L  L + G+ ++ +P+ +  L+ L  L+L  C  ++Y+        S+E +++
Sbjct: 813 NISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQYLPELP---PSIEVLDV 869

Query: 362 SNCSNLKGFPEIP 374
           +NC++L+     P
Sbjct: 870 TNCTSLETVFTCP 882



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 210/469 (44%), Gaps = 90/469 (19%)

Query: 341  SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
            S ++ +   +  L +++ +++S C NL   P+        S ++ +      L++C +L 
Sbjct: 617  SRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSM----ASNLQTV-----NLSRCVRLR 667

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGN--LEALEELRVEG-TGIREVPKSLAQLA 457
             + +S+   + L +L ++ CK L+ L   L N  L +L  L + G + ++E   +  ++ 
Sbjct: 668  HVHASILSLQKLVNLNLVWCKNLKSL---LSNTPLNSLRILELYGCSSLKEFSVTSEEMT 724

Query: 458  LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
               L+   C++   LP  +     L +LE+  C     LP+E   L+ L  L +    + 
Sbjct: 725  YLDLR---CTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVLSDCTLL 781

Query: 518  EVPES---LGQLSSLEWLVLSDN--NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
            +          L SL +L L DN  NL  +P +++ LSSL  L LS +N++ IP+ +  L
Sbjct: 782  DTSNLHLLFDGLRSLGYLCL-DNCCNLTELPHNISLLSSLYYLSLSGSNVKNIPKSIKHL 840

Query: 573  SSLKYLDLFE-NNLDRIPEYLRSFP-------TSIPSEFT---------SLRLSVDLRNC 615
            S L+ LDL +  ++  +PE   S         TS+ + FT           ++ +  +NC
Sbjct: 841  SQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKVFISFKNC 900

Query: 616  LKLDPNELSEIIKDG-------------------------WMKQSVNGETYITKSMYFPG 650
            ++L+    + I+ D                          + K       +   ++  PG
Sbjct: 901  VELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHHPPTVICPG 960

Query: 651  NEIPKWFRHQSTGSTISLK-----TPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDR 705
            + +P WF ++ST ++I+++     +PQ    + + GF FC+++          +S+ +++
Sbjct: 961  SRVPDWFHYRSTEASITIELSVSHSPQ----SNIFGFIFCLILP---------QSLPNEK 1007

Query: 706  KCNLFDVVCDRRSEGYDSY-TSSYLGKISHVESDHVFLGSSIFAGENSC 753
              N + + C+   EG ++   +S     + + SDHV+L    +  EN C
Sbjct: 1008 NLN-WKIGCECYMEGGENIRNTSMCSFATGLVSDHVYL----WYDENFC 1051


>gi|224131108|ref|XP_002328456.1| predicted protein [Populus trichocarpa]
 gi|222838171|gb|EEE76536.1| predicted protein [Populus trichocarpa]
          Length = 317

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 163/329 (49%), Gaps = 24/329 (7%)

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKN 173
           +LDL  CS L     +I  L  L  L LD    L SLP SI + K L+ L L GCS L +
Sbjct: 1   MLDLDGCSGLASLPDNIGALKSLRWLYLD---GLVSLPDSIGALKSLEYLDLSGCSGLAS 57

Query: 174 LPKMTSCHLRSTLPL-----LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           LP      L+S   L      G+ +  LP +I  L ++  L +  C  L ++  +I  L+
Sbjct: 58  LPDNIG-ALKSLKSLNLSGWSGLALASLPDNIGALKSLQSLRLSGCSGLASLPDNIGVLK 116

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            LES+ +H C  L    +P  NI   +S +     L+L  C    SLP      KSL SL
Sbjct: 117 SLESLNLHGCSGLALASLPD-NIGALKSLQS----LRLSCCSGLASLPDNIGALKSLESL 171

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           ++  C     LPD +G L++L  L + G + +  LP+ +G L  L  L+L  CS L  + 
Sbjct: 172 DLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLP 231

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
            +I   KS++S+ +S CS L   P+    NI   G+ +   S L L+ CS L SLP ++ 
Sbjct: 232 DNIGAFKSLQSLRLSCCSGLASLPD----NI---GVLKSLES-LNLHGCSGLASLPDNIG 283

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             KSL SL +  C +L  LP  +G L+ L
Sbjct: 284 ALKSLKSLHLSCCSRLASLPGRIGELKPL 312



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 162/300 (54%), Gaps = 15/300 (5%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L++  C     LPD +G L++L  L +DG  +  LP+ +G L  L  L+L  CS L  + 
Sbjct: 2   LDLDGCSGLASLPDNIGALKSLRWLYLDG--LVSLPDSIGALKSLEYLDLSGCSGLASLP 59

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
            +I  LKS++S+ +S  S L     +P    D  G  +   S L+L+ CS L SLP ++ 
Sbjct: 60  DNIGALKSLKSLNLSGWSGLA-LASLP----DNIGALKSLQS-LRLSGCSGLASLPDNIG 113

Query: 408 MFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKL 463
           + KSL SL +  C    L  LPD +G L++L+ LR+   +G+  +P ++  L +L  L L
Sbjct: 114 VLKSLESLNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDL 173

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPES 522
             CS   SLP  +   KSL SL++  C     LPD IG L+ LK L + G + +  +P++
Sbjct: 174 HGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLPDN 233

Query: 523 LGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           +G   SL+ L LS  + L  +P+++  L SL SL L   + L  +P+ +  L SLK L L
Sbjct: 234 IGAFKSLQSLRLSCCSGLASLPDNIGVLKSLESLNLHGCSGLASLPDNIGALKSLKSLHL 293



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 169/372 (45%), Gaps = 64/372 (17%)

Query: 139 VLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELP 197
           +LDLD C  L SLP +I + K L+ L L G                         +  LP
Sbjct: 1   MLDLDGCSGLASLPDNIGALKSLRWLYLDG-------------------------LVSLP 35

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
            SI  L ++  L +  C  L ++  +I  L+ L+S+ +     L    +P  NI   +S 
Sbjct: 36  DSIGALKSLEYLDLSGCSGLASLPDNIGALKSLKSLNLSGWSGLALASLPD-NIGALKSL 94

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE--RLPDELGNLQALNRLIID 315
           +     L+L  C    SLP    + KSL SL +  C       LPD +G L++L  L + 
Sbjct: 95  QS----LRLSGCSGLASLPDNIGVLKSLESLNLHGCSGLALASLPDNIGALKSLQSLRLS 150

Query: 316 G-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             + +  LP+ +G L  L  L+L  CS L  +  +I  LKS+ES+++S CS L   P+  
Sbjct: 151 CCSGLASLPDNIGALKSLESLDLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPD-- 208

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
             NI    ++ + S  L L+ CS+L SLP ++  FKSL SL +  C  L  LPD +G L+
Sbjct: 209 --NI--GALKSLKS--LDLHGCSRLASLPDNIGAFKSLQSLRLSCCSGLASLPDNIGVLK 262

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           +LE L + G                      CS   SLP  +   KSL SL +  C    
Sbjct: 263 SLESLNLHG----------------------CSGLASLPDNIGALKSLKSLHLSCCSRLA 300

Query: 495 RLPDEIGNLEYL 506
            LP  IG L+ L
Sbjct: 301 SLPGRIGELKPL 312



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 36/251 (14%)

Query: 390 VLKLNKCSKLESLPSSLCMFKS------------------LTSLEIID---CKKLERLPD 428
           +L L+ CS L SLP ++   KS                  L SLE +D   C  L  LPD
Sbjct: 1   MLDLDGCSGLASLPDNIGALKSLRWLYLDGLVSLPDSIGALKSLEYLDLSGCSGLASLPD 60

Query: 429 ELGNLEALEELRV---EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            +G L++L+ L +    G  +  +P ++  L +L  L+L  CS   SLP  + V KSL S
Sbjct: 61  NIGALKSLKSLNLSGWSGLALASLPDNIGALKSLQSLRLSGCSGLASLPDNIGVLKSLES 120

Query: 485 LEIIDCKN--FMRLPDEIGNLEYLKVLTIK-GTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
           L +  C       LPD IG L+ L+ L +   + +  +P+++G L SLE L L   + L 
Sbjct: 121 LNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGCSGLA 180

Query: 541 IIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTS 598
            +P+++  L SL SL LS  + L  +P+ +  L SLK LDL   + L  +P+ + +F + 
Sbjct: 181 SLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLPDNIGAFKS- 239

Query: 599 IPSEFTSLRLS 609
                 SLRLS
Sbjct: 240 ----LQSLRLS 246



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 86/175 (49%), Gaps = 4/175 (2%)

Query: 74  GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQ 132
           G  +  L D++  L SL+ + L     L  LPD +   ++LE LDL  CS L     +I 
Sbjct: 128 GLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGCSGLASLPDNIG 187

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLL 189
            L  LE LDL  C  L SLP +I + K LK L L GCS L +LP        L+S     
Sbjct: 188 ALKSLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLPDNIGAFKSLQSLRLSC 247

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
             G+  LP +I  L ++  L ++ C  L ++  +I  L+ L+S+ +  C  L  L
Sbjct: 248 CSGLASLPDNIGVLKSLESLNLHGCSGLASLPDNIGALKSLKSLHLSCCSRLASL 302



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 60  NILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILD 117
           NI   ++L SL + G S++  L D++    SL+ + L     L  LPD + + ++LE L+
Sbjct: 209 NIGALKSLKSLDLHGCSRLASLPDNIGAFKSLQSLRLSCCSGLASLPDNIGVLKSLESLN 268

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
           L  CS L     +I  L  L+ L L  C  L SLP  I
Sbjct: 269 LHGCSGLASLPDNIGALKSLKSLHLSCCSRLASLPGRI 306


>gi|297794745|ref|XP_002865257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311092|gb|EFH41516.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1838

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 35/305 (11%)

Query: 47   RYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
            R   W  FP++ + +  H E+LV L M  SK+  LW  ++ L SLK + L+ S  L ++P
Sbjct: 1318 RLLHWDAFPMRCMPSNFHGESLVDLIMEASKLETLWSGLKLLNSLKVMSLRCSLDLREIP 1377

Query: 106  DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            DLSLA NLE LDLG+CSSL    SSI +L+KL+ LD++ C  L +LPT I+ K L  L L
Sbjct: 1378 DLSLATNLERLDLGHCSSLKMLPSSIGHLHKLKDLDMEFCTYLEALPTGINLKSLYYLNL 1437

Query: 166  RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
             GCS L++ P++++    S L L G  IEE+P+ I+ +S++  L +  CK+L+ IS +I 
Sbjct: 1438 NGCSQLRSFPQISTN--ISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKKLKKISPNIS 1495

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
            KL+ L  +    C  L     P+                           P G  +F S+
Sbjct: 1496 KLKLLAEVDFSECTALTEDSWPNH--------------------------PGG--IFTSI 1527

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
              ++ +   +F+ LPD   ++Q  + +  +   +  LPE     A LS L   NC  LE 
Sbjct: 1528 MRVD-MSGNSFKSLPDTWTSIQPKDLIFNNCRNLASLPE---LPASLSMLMANNCGSLEN 1583

Query: 346  ISSSI 350
            ++ S 
Sbjct: 1584 LNGSF 1588



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 197/456 (43%), Gaps = 70/456 (15%)

Query: 8   IQINPYTFSKMTELRLLK-FCGSKNKCMV-----HSLEGVPFTELRYFEWHQFPLKTL-N 60
             I P  F  M  LRLLK FC +     V      SL  +P  ELR   W  +PL++L  
Sbjct: 531 FDIKPAAFDNMLNLRLLKIFCSNPEINHVINFPKGSLHSLP-NELRLLHWDNYPLQSLPQ 589

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                +LV + MP S++ +LW   +NL  L+ I L +S+ L  + DLS AQNLE      
Sbjct: 590 KFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSQELVDVDDLSKAQNLE------ 643

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
                             V+DL  C  L S P +    +L+ + L GC  +K++P     
Sbjct: 644 ------------------VIDLQGCTRLQSFPDTCQLLHLRVVNLSGCLEIKSVPDFPPN 685

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            +  TL L G GI +LP + +   N GEL+  S    + +S  + KL+ L+S++     +
Sbjct: 686 IV--TLRLKGTGIIKLPIAKR---NGGELV--SLSEFQGLSDDL-KLERLKSLQ-ESSLS 736

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            Q L    C              L LK C    SLP+      +L  L+++D     RL 
Sbjct: 737 CQDLGKLIC--------------LDLKDCFLLRSLPN----MANLELLKVLDLSGCSRLN 778

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS-SSIFKLKSVESI 359
                 + L  L + GTA+R++ +      L   LEL N       S  ++  L+ ++ +
Sbjct: 779 TIQSFPRNLKELYLVGTAVRQVAQ------LPQSLELLNAHGSRLRSLPNMANLELLKVL 832

Query: 360 EISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++S CS L      P       + G+ + ++P     L   +   S   SL    +L  L
Sbjct: 833 DLSGCSRLATIQSFPRNLKELYLAGTAVRQVPQLPQSLEFMNAHGSRLRSLSNMANLELL 892

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           +++D     RL    G    L+EL + GT +R +P+
Sbjct: 893 KVLDLSGCSRLDTIKGLPRNLKELDIAGTSVRGLPQ 928



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 144/640 (22%), Positives = 248/640 (38%), Gaps = 142/640 (22%)

Query: 216  RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
            +L+ +      L+ L +IR+  C + + +++         SK Q    + L+ C R +S 
Sbjct: 605  QLQKLWGGTKNLEMLRTIRL--CHSQELVDVDDL------SKAQNLEVIDLQGCTRLQSF 656

Query: 276  PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP---EGLGQLALL 332
            P   C    L  + +  C   + +PD   N+  L    + GT I +LP      G+L  L
Sbjct: 657  PD-TCQLLHLRVVNLSGCLEIKSVPDFPPNIVTLR---LKGTGIIKLPIAKRNGGELVSL 712

Query: 333  SK-------------------------------LELKNCSELEYISSSIFKLKSVESIEI 361
            S+                               L+LK+C  L  + + +  L+ ++ +++
Sbjct: 713  SEFQGLSDDLKLERLKSLQESSLSCQDLGKLICLDLKDCFLLRSLPN-MANLELLKVLDL 771

Query: 362  SNCSNL---KGFP----EIPFCNIDGSGIERIPSSVLKLNK-CSKLESLPSSLCMFKSLT 413
            S CS L   + FP    E+         + ++P S+  LN   S+L SLP+      +L 
Sbjct: 772  SGCSRLNTIQSFPRNLKELYLVGTAVRQVAQLPQSLELLNAHGSRLRSLPN----MANLE 827

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
             L+++D     RL         L+EL + GT +R+VP+    L        +  S  ++ 
Sbjct: 828  LLKVLDLSGCSRLATIQSFPRNLKELYLAGTAVRQVPQLPQSLEFMNAHGSRLRSLSNMA 887

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
            +       L  L+++D     RL    G    LK L I GT++R +P+            
Sbjct: 888  N-------LELLKVLDLSGCSRLDTIKGLPRNLKELDIAGTSVRGLPQ------------ 928

Query: 534  LSDNNLQIIPESLNQLSS--LVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
                    +P+SL  L+S   VSL     + E++P   +          F N  D  P+ 
Sbjct: 929  --------LPQSLELLNSHGCVSLTSIRLDFEKLPMHYN----------FSNCFDLSPQV 970

Query: 592  LRSFPTS-------IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK 644
            + +F          IP +   + LS+ L          LS +     ++Q +N    +  
Sbjct: 971  VNNFLVKALNNFKYIPRDHQQVILSMSLSLVYTQQHLSLSYMTYFALLQQELN--RALAF 1028

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
            S   P + I         GS++  +   P+  N L+GFA  V VA S          ED 
Sbjct: 1029 SFCAPSHAIQNSTLDLQQGSSVMARL-NPSWRNTLVGFAMLVEVAFS----------EDF 1077

Query: 705  RKCNLFDVVCD---RRSEGYDSYTSSYL-----GK-ISHVESDHVFLGSSIFAGENSCKR 755
               N F + C    +  EG+       L     GK +  + +DH+F+   +    ++   
Sbjct: 1078 YDANGFGIRCVCRWKNKEGHSHKIERNLHCWAPGKAVPKLLNDHMFVFFDVNMRPSTADG 1137

Query: 756  SD-----EF----FFHIDRSC------CEVKKCGIHFVHA 780
            +D     +F    FF +D+        C+V KCG+  + A
Sbjct: 1138 NDPDICADFVVFEFFPVDKQTKLLYDSCKVTKCGVRVLTA 1177



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 24/181 (13%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
            +L ++ C   E+LP+G    KSL  L +  C      P    N+   + L +DGTAI E+
Sbjct: 1411 DLDMEFCTYLEALPTG-INLKSLYYLNLNGCSQLRSFPQISTNI---SDLYLDGTAIEEV 1466

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG----------FPE 372
            P  +  ++ LS L +  C +L+ IS +I KLK +  ++ S C+ L            F  
Sbjct: 1467 PTWIENISSLSYLSMNGCKKLKKISPNISKLKLLAEVDFSECTALTEDSWPNHPGGIFTS 1526

Query: 373  IPFCNIDGSGIERIPSSV-------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
            I   ++ G+  + +P +        L  N C  L SLP    +  SL+ L   +C  LE 
Sbjct: 1527 IMRVDMSGNSFKSLPDTWTSIQPKDLIFNNCRNLASLPE---LPASLSMLMANNCGSLEN 1583

Query: 426  L 426
            L
Sbjct: 1584 L 1584



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 68/337 (20%)

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSL 453
            + SKLE+L S L +  SL  + +     L  +PD L     LE L +   + ++ +P S+
Sbjct: 1345 EASKLETLWSGLKLLNSLKVMSLRCSLDLREIPD-LSLATNLERLDLGHCSSLKMLPSSI 1403

Query: 454  AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
              L  L  L ++ C+  E+LP+ + + KSL  L +  C      P    N+  L    + 
Sbjct: 1404 GHLHKLKDLDMEFCTYLEALPTGINL-KSLYYLNLNGCSQLRSFPQISTNISDL---YLD 1459

Query: 513  GTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQL---------------------- 549
            GTAI EVP  +  +SSL +L ++    L+ I  ++++L                      
Sbjct: 1460 GTAIEEVPTWIENISSLSYLSMNGCKKLKKISPNISKLKLLAEVDFSECTALTEDSWPNH 1519

Query: 550  -----SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENN---LDRIPEYLRSFPTSIPS 601
                 +S++ + +S N+ + +P   D  +S++  DL  NN   L  +PE   S    + +
Sbjct: 1520 PGGIFTSIMRVDMSGNSFKSLP---DTWTSIQPKDLIFNNCRNLASLPELPASLSMLMAN 1576

Query: 602  EFTSL----------RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGN 651
               SL          ++++   NC  L+ ++  E+I       ++            PG 
Sbjct: 1577 NCGSLENLNGSFDYPQMALQFINCFSLN-HQARELILQSDCAYAI-----------LPGG 1624

Query: 652  EIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
            E+P  F H++ GS +++       + K   F  C+VV
Sbjct: 1625 ELPAHFTHRAYGSVLTIYL-----FKKFPTFKACIVV 1656


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 201/402 (50%), Gaps = 63/402 (15%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKC---------MVHSLEGVPFTELRYFEW 51
           MSKI+  I +NP  F++M+ L+LL+F                +   L+ +  ++L+Y  W
Sbjct: 549 MSKIDEIIDLNPNVFARMSNLKLLRFYDPNFDSRELKDIKVRLSRGLDSLS-SKLQYLYW 607

Query: 52  HQFPLKTLNI-LHWENLVSLKMPGSKVTQL-WDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
           + +P KTL    H ++LV L +P SK+ +L W ++ +L  LK IDL +S  LT +P+LS 
Sbjct: 608 NGYPSKTLPANFHPKDLVELHLPSSKLKRLPWKNM-DLKKLKEIDLSWSSRLTTVPELSR 666

Query: 110 AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
           A NL       C +L+++                  K +   P++I    L+ L L  C 
Sbjct: 667 ATNLT------CINLSDS------------------KRIRRFPSTIGLDSLETLNLSDCV 702

Query: 170 NLKNLPKMTSCHLRST--LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
            L+  P ++    RS   L L G  IEE+PSS+ CLS +  L ++ C +L+++ +SI K+
Sbjct: 703 KLERFPDVS----RSIRFLYLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSLPTSICKI 758

Query: 228 QFLESIRIHRCPNLQFL----EMPSC----NIDGTRSKEQPSSELKLKK--------CPR 271
           + LE + +  C NL+      E   C     +DGT   + P S   LK+        C  
Sbjct: 759 KSLELLCLSGCTNLKHFPEISETMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCRN 818

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
              LP      K L+SL+  DCP  E+LP+EL  + +L  LI  G  + +L   L  L+ 
Sbjct: 819 LVCLPESISKLKHLSSLDFSDCPKLEKLPEEL--IVSL-ELIARGCHLSKLASDLSGLSC 875

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           LS L+L   ++ E +  SI +L  + +++IS C  L+  P++
Sbjct: 876 LSFLDLSK-TKFETLPPSIKQLSQLITLDISFCDRLESLPDL 916



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 25/316 (7%)

Query: 296 FERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            +RLP +  +L+ L  + +  ++ +  +PE L +   L+ + L +   +    S+I  L 
Sbjct: 634 LKRLPWKNMDLKKLKEIDLSWSSRLTTVPE-LSRATNLTCINLSDSKRIRRFPSTI-GLD 691

Query: 355 SVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV--------LKLNKCSKLESL 402
           S+E++ +S+C  L+ FP+    I F  + G+ IE +PSSV        L L  C+KL+SL
Sbjct: 692 SLETLNLSDCVKLERFPDVSRSIRFLYLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSL 751

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
           P+S+C  KSL  L +  C  L+  P+    ++ L EL ++GT I ++P S+  L  LS L
Sbjct: 752 PTSICKIKSLELLCLSGCTNLKHFPEISETMDCLVELYLDGTAIADLPLSVENLKRLSSL 811

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE-IGNLEYLKVLTIKGTAIREVP 520
            L  C +   LP  +   K L+SL+  DC    +LP+E I +LE    L  +G  + ++ 
Sbjct: 812 SLSNCRNLVCLPESISKLKHLSSLDFSDCPKLEKLPEELIVSLE----LIARGCHLSKLA 867

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD 579
             L  LS L +L LS    + +P S+ QLS L++L +S  + LE +P   D   SL+++ 
Sbjct: 868 SDLSGLSCLSFLDLSKTKFETLPPSIKQLSQLITLDISFCDRLESLP---DLSLSLQFIQ 924

Query: 580 LFENNLDRIPEYLRSF 595
                 + +  + R F
Sbjct: 925 AIYARAEHVALFYRPF 940


>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 145/442 (32%), Positives = 214/442 (48%), Gaps = 52/442 (11%)

Query: 11  NPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVS 69
           N   FSKM+ LRLL+    +N C     E +   ELR+ EW  +P K L +    ENLV 
Sbjct: 568 NTGVFSKMSRLRLLRI---RNACFDSGPEYLS-NELRFLEWRNYPSKYLPSSFQPENLVE 623

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           + +  S + QL    + L SLK IDL YS+ L K P+ +   NLE L L  C  L+E HS
Sbjct: 624 VHLCYSNLRQLRLGNKILDSLKVIDLSYSEYLIKTPNFTGIPNLERLILQGCRRLSEVHS 683

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH--LRSTL 186
           SI + NKL  ++L  C+SLTSLP+ I     L+ L L GCS LK  P++      LR  L
Sbjct: 684 SIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRK-L 742

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE- 245
            L    IEELP SI+ L  +  L +  CK+L  + SSI  L+ L+++ +  C  L+ L  
Sbjct: 743 CLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPE 802

Query: 246 -------MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
                  +   ++ GT  +E P S   LK     + L    C   S ++  I     F  
Sbjct: 803 NFGQLECLNELDVSGTAIREPPVSIFSLKNL---KILSFHGCAESSRSTTNIWQRLMFPL 859

Query: 299 LPDELGN-----------LQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELEY 345
           +P +  N           L +L RL +    + E  +P  +G L+ L +L   N S  ++
Sbjct: 860 MPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQL---NLSRNKF 916

Query: 346 IS--SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
           +S  +SI +L  ++ + + +C  L+  PE+P      S +E       ++N C+ LE + 
Sbjct: 917 VSLPTSIDQLSGLQFLRMEDCKMLQSLPELP------SNLEE-----FRVNGCTSLEKMQ 965

Query: 404 SS--LCMFKSLTSLEIIDCKKL 423
            S  LC    L  L  I+C +L
Sbjct: 966 FSRKLCQLNYLRYL-FINCWRL 986



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 193/464 (41%), Gaps = 89/464 (19%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            + L  C  L SLPS +     L  L +  C KL+  P+  GN + L +L ++ T I E+P
Sbjct: 694  VNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELP 753

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+  L  L  L LK C     LPS +   KSL +L +  C     LP+  G LE L  L
Sbjct: 754  PSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECLNEL 813

Query: 510  TIKGTAIREVPESLGQLSSLE-----------------W--------------------- 531
             + GTAIRE P S+  L +L+                 W                     
Sbjct: 814  DVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLP 873

Query: 532  ----------LVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
                      L LS+ NL    +P  +  LSSL  L LS N    +P  +D LS L++L 
Sbjct: 874  SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLQFLR 933

Query: 580  LFE----NNLDRIPEYLRSFPTSIPSEFTSLRLSVDL----------RNCLKLDPNELSE 625
            + +     +L  +P  L  F  +  +    ++ S  L           NC +L  ++   
Sbjct: 934  MEDCKMLQSLPELPSNLEEFRVNGCTSLEKMQFSRKLCQLNYLRYLFINCWRLSESDCWN 993

Query: 626  IIKDGWMKQSVNGETYITKS--MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGF 682
             +    +++   G   + +S  +  PG+EIP WF HQS GS++S++TP  +  N + +G+
Sbjct: 994  NMFPTLLRKCFQGPPNLIESFSVIIPGSEIPTWFSHQSEGSSVSVQTPPHSHENDEWLGY 1053

Query: 683  AFCVVVACSVSECCRHESVEDDRKCNLFD--VVCDRRSEGYDSYTSSYLGKISHVESDHV 740
            A C  +               D   N+F   + C    +G +S +     K   + SDH+
Sbjct: 1054 AVCASLGYP------------DFPPNVFRSPMQCFFNGDGNESESIYVRLKPCEILSDHL 1101

Query: 741  FLGSSIFAGENSCKRSDEFF-FHIDRSCCEVK--KCGIHFVHAQ 781
            +         +  KR D    F  + +C + K  KCG+  V+ Q
Sbjct: 1102 WF----LYFPSRFKRFDRHVRFRFEDNCSQTKVIKCGVRLVYQQ 1141



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 46/291 (15%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           + L  C    SLPS       L  L +  C   +  P+  GN + L +L +D T+I ELP
Sbjct: 694 VNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELP 753

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFC 376
             +  L  L  L LK+C +L  + SSI  LKS++++ +S CS L+  PE       +   
Sbjct: 754 PSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECLNEL 813

Query: 377 NIDGSGIERIPSSVLKLNKCSKL------ESLPSSLCMFKSL------------------ 412
           ++ G+ I   P S+  L     L      ES  S+  +++ L                  
Sbjct: 814 DVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLP 873

Query: 413 --------TSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLK 462
                   T L + +C   E  +P+++G L +L +L +       +P S+ QL  L  L+
Sbjct: 874 SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLQFLR 933

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNF--MRLPDEIGNLEYLKVLTI 511
           ++ C   +SLP    +  +L    +  C +   M+   ++  L YL+ L I
Sbjct: 934 MEDCKMLQSLPE---LPSNLEEFRVNGCTSLEKMQFSRKLCQLNYLRYLFI 981



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 8/178 (4%)

Query: 410 KSLTSLEIIDCKKLERL---PDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLK 464
           K L SL++ID    E L   P+  G +  LE L ++G   + EV  S+     L  + L 
Sbjct: 639 KILDSLKVIDLSYSEYLIKTPNFTG-IPNLERLILQGCRRLSEVHSSIGHHNKLIYVNLM 697

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C S  SLPSR+     L  L +  C      P+  GN + L+ L +  T+I E+P S+ 
Sbjct: 698 DCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELPPSIQ 757

Query: 525 QLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
            L  L  L L D   L  +P S+N L SL +L LS  + LE +PE    L  L  LD+
Sbjct: 758 YLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECLNELDV 815


>gi|296088756|emb|CBI38206.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 187/381 (49%), Gaps = 57/381 (14%)

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE L+L  C+SL + HSS+  L KL  L L  C+ L S P+SI  + L+ L + GCSN 
Sbjct: 3   NLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSIELESLEVLDISGCSNF 62

Query: 172 KNLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           +  P++     HLR  + L   GI+ELP+SI+ L ++  L + +C   E         +F
Sbjct: 63  EKFPEIHGNMRHLRK-IYLNQSGIKELPTSIEFLESLEMLQLANCSNFE---------KF 112

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCM 281
            E  R  +  +L +L +      GT  KE PSS        EL L +C     LPS  C 
Sbjct: 113 PEIQRDMK--SLHWLVL-----GGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICR 165

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            + L  + +  C N E  PD + +++ + RL + GT+++ELP  +  L  L +L+L NC 
Sbjct: 166 LEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCE 225

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
            L  + SSI  ++S+E + + NCS L+  P+ P                    +CS +  
Sbjct: 226 NLVTLPSSICNIRSLERLVLQNCSKLQELPKNPM-----------------TLQCSDM-- 266

Query: 402 LPSSLCMFKSLTSLEIIDCKKL-ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK 460
               LC   SL  L +  C  +   +P +L  L +L  L + G+ IR +P  ++QL +  
Sbjct: 267 --IGLC---SLMDLNLSGCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGISQLRI-- 319

Query: 461 LKLKKCSSFES---LPSRLYV 478
           L+L  C   ES   LPS L V
Sbjct: 320 LQLNHCKMLESITELPSSLRV 340



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 167/342 (48%), Gaps = 57/342 (16%)

Query: 239 PNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           PNL+ L +  C     +  +    +  + L+LK C + ES PS     +SL  L+I  C 
Sbjct: 2   PNLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSS-IELESLEVLDISGCS 60

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           NFE+ P+  GN++ L ++ ++ + I+ELP                        +SI  L+
Sbjct: 61  NFEKFPEIHGNMRHLRKIYLNQSGIKELP------------------------TSIEFLE 96

Query: 355 SVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV--------LKLNKCSKL 399
           S+E ++++NCSN + FPEI        +  + G+ I+ +PSS+        L L +C  L
Sbjct: 97  SLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNL 156

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-AL 458
             LPSS+C  + L  + +  C  LE  PD + ++E +  L + GT ++E+P S+  L  L
Sbjct: 157 RRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGL 216

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP---------DEIGNLEYLKVL 509
            +L L  C +  +LPS +   +SL  L + +C     LP         D IG L  L  L
Sbjct: 217 EELDLTNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMTLQCSDMIG-LCSLMDL 275

Query: 510 TIKGTAIR--EVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
            + G  +    +P  L  LSSL  L LS +N++ IP  ++QL
Sbjct: 276 NLSGCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGISQL 317



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 153/263 (58%), Gaps = 14/263 (5%)

Query: 309 LNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           L RL ++G T++R++   LG L  L+ L+LK+C +LE   SSI +L+S+E ++IS CSN 
Sbjct: 4   LERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSI-ELESLEVLDISGCSNF 62

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           + FPEI   + +   + +I      LN+ S ++ LP+S+   +SL  L++ +C   E+ P
Sbjct: 63  EKFPEI---HGNMRHLRKI-----YLNQ-SGIKELPTSIEFLESLEMLQLANCSNFEKFP 113

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           +   ++++L  L + GT I+E+P S+  L  L +L L +C +   LPS +   + L  + 
Sbjct: 114 EIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIY 173

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPES 545
           +  C N    PD I ++E +  L + GT+++E+P S+  L  LE L L++  NL  +P S
Sbjct: 174 LHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCENLVTLPSS 233

Query: 546 LNQLSSLVSLKLSN-NNLERIPE 567
           +  + SL  L L N + L+ +P+
Sbjct: 234 ICNIRSLERLVLQNCSKLQELPK 256



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 172/367 (46%), Gaps = 57/367 (15%)

Query: 66  NLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           NL  L + G + + ++   +  L  L  + LK  + L   P     ++LE+LD+  CS+ 
Sbjct: 3   NLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSIELESLEVLDISGCSNF 62

Query: 125 T---ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK---- 176
               E H ++++L K+ +        +  LPTSI   + L+ L L  CSN +  P+    
Sbjct: 63  EKFPEIHGNMRHLRKIYLNQ----SGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRD 118

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           M S H    L L G  I+ELPSSI  L+ + EL +Y CK L  + SSI +L+FL  I +H
Sbjct: 119 MKSLHW---LVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLH 175

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C NL+       +++     E   + LK         LP      K L  L++ +C N 
Sbjct: 176 GCSNLEAFPDIIKDMENIGRLELMGTSLK--------ELPPSIEHLKGLEELDLTNCENL 227

Query: 297 ERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             LP  + N+++L RL++   + ++ELP              KN   L+   S +  L S
Sbjct: 228 VTLPSSICNIRSLERLVLQNCSKLQELP--------------KNPMTLQ--CSDMIGLCS 271

Query: 356 VESIEISNCSNLKG-FPEIPFC-------NIDGSGIERIPSS-----VLKLNKCSKLES- 401
           +  + +S C+ + G  P   +C       N+ GS I  IPS      +L+LN C  LES 
Sbjct: 272 LMDLNLSGCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGISQLRILQLNHCKMLESI 331

Query: 402 --LPSSL 406
             LPSSL
Sbjct: 332 TELPSSL 338


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 204/400 (51%), Gaps = 58/400 (14%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--------GSGI 383
            L ++ L  C+ L  +  SI  LK +  + +  CS L+ FPE+   N++        G+ I
Sbjct: 682  LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 741

Query: 384  ERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
              +PSS+        L L  C KL SLP S+C   SL +L +  C KL++LPD+LG L+ 
Sbjct: 742  RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 801

Query: 436  LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS-KSLTSLEIIDCKNF 493
            L EL V+GTGI+EVP S+  L  L +L L  C  +ES    L  S  S  +LE       
Sbjct: 802  LVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGSWPTLEP------ 855

Query: 494  MRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSS 551
            +RLP  +  L  LK+L +    + E  +P  L  LSSLE L LS N+   IP +L+ LS 
Sbjct: 856  LRLP-RLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSR 914

Query: 552  LVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR--- 607
            L  L L    +L+ +PE   P SS++YL+            L +F  S PS  TS R   
Sbjct: 915  LHVLMLPYCKSLQSLPEL--P-SSIRYLNA------EACTSLETFSCS-PSACTSKRYGG 964

Query: 608  LSVDLRNCLKLDPNELSEIIKD------------GWMKQSVNGETYITKSMY---FPGNE 652
            L ++  NC +L  NE ++ +K              +++  + G      ++Y    PG+ 
Sbjct: 965  LRLEFSNCFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNLYDAIVPGSR 1024

Query: 653  IPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACS 691
            IP+WF  QSTGS+++++ P P  YN KLMG A C V+  +
Sbjct: 1025 IPEWFVDQSTGSSVTVELP-PHWYNTKLMGMAVCAVIGAT 1063



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 140/307 (45%), Gaps = 54/307 (17%)

Query: 11  NPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVS 69
           +PY  SK+   R  KF               P   LR   WH +PLK+L +I H + LV 
Sbjct: 594 SPYNDSKLHLSRDFKF---------------PSNNLRSLHWHGYPLKSLPSIFHPKKLVE 638

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L M  S + QLW+  +    LK I L +S+ LTK PD S A  L  + L  C+SL + H 
Sbjct: 639 LNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHP 698

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
           SI  L +L  L+L+ C  L   P           V++G  NL++L         S + L 
Sbjct: 699 SIGALKELIFLNLEGCSKLEKFPE----------VVQG--NLEDL---------SGISLE 737

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE---- 245
           G  I ELPSSI  L+ +  L + +CK+L ++  SI +L  L+++ +  C  L+ L     
Sbjct: 738 GTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLG 797

Query: 246 ----MPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCM-FKSLTSLEIID 292
               +   ++DGT  KE PSS        EL L  C   ES        F S  +LE + 
Sbjct: 798 RLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGSWPTLEPLR 857

Query: 293 CPNFERL 299
            P    L
Sbjct: 858 LPRLSGL 864



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 156/383 (40%), Gaps = 63/383 (16%)

Query: 7   EIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
           E+ ++   F+KM +LRLL+F  C         S E +  +    + W  +     N    
Sbjct: 542 ELNLSVDAFAKMNKLRLLRFYNCQFYGSSEYLSEEELIASTRDAWRWMGYDNSPYNDSKL 601

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
                 K P +          NL SL      +   L  LP +   + L  L++ Y S L
Sbjct: 602 HLSRDFKFPSN----------NLRSLHW----HGYPLKSLPSIFHPKKLVELNMCY-SLL 646

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
            +     +   KL+ + L   + LT  P    +  L+R++L GC++L             
Sbjct: 647 KQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLV------------ 694

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                     +L  SI  L  +  L +  C +LE         +F E ++     NL+  
Sbjct: 695 ----------KLHPSIGALKELIFLNLEGCSKLE---------KFPEVVQ----GNLE-- 729

Query: 245 EMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
           ++   +++GT  +E PSS         L L+ C +  SLP   C   SL +L +  C   
Sbjct: 730 DLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKL 789

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI-FKLKS 355
           ++LPD+LG LQ L  L +DGT I+E+P  +  L  L +L L  C   E  S ++ F   S
Sbjct: 790 KKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGS 849

Query: 356 VESIEISNCSNLKGFPEIPFCNI 378
             ++E      L G   +   N+
Sbjct: 850 WPTLEPLRLPRLSGLYSLKILNL 872


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 207/476 (43%), Gaps = 104/476 (21%)

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
           C+ L SLP S+ + +SL  L +  C KLE+ P+ +G++  L +L ++GT I EVP S A 
Sbjct: 465 CNCLRSLPGSIGL-ESLNVLVLSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFAN 523

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L+ L L+ C + E LPS +   K L +L++  C     LPD +G LE L+ L +  T
Sbjct: 524 LTGLTFLSLRNCKNLEKLPSNINSLKYLKNLDLFGCSKLKSLPDSLGYLECLEKLDLGKT 583

Query: 515 AIREVPESLGQLSSL-------------EW-------LVLSDNNLQIIPESLNQLSSLVS 554
           ++R+ P S+  L  L             +W         ++ + + +   SLN L SL  
Sbjct: 584 SVRQPPSSIRLLKYLKVLSFHGIGPIAWQWPYKILSIFGITHDAVGLSLPSLNGLLSLTE 643

Query: 555 LKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIP--------------------EYL 592
           L LS+ NL  + IP     LSSL+ L++  NN   IP                    + L
Sbjct: 644 LDLSDCNLSDKMIPADFYTLSSLEVLNIGRNNFVNIPASISQLPRLRFLYLDDCKNLKAL 703

Query: 593 RSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW----------MKQSVNGETYI 642
           R  PT+I          +   NC  L+     E+I D W           K +VN     
Sbjct: 704 RKLPTTIHE--------ISANNCTSLETLSSPEVIADKWNWPIFYFTNCSKLAVNQGNDS 755

Query: 643 TKSMYF--------------------------PGNEIPKWFRHQSTGSTISLKTPQPTGY 676
           T   +                           PG E+P WF HQ+ GS++ ++   P  Y
Sbjct: 756 TAFKFLRSHLQSLPMSQLQDASYTGCRFDVIVPGTEVPAWFSHQNVGSSLIIQL-TPKWY 814

Query: 677 N-KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY---LGKI 732
           N K  G A C+  A   +     + +  D       + C   +  Y S TSS+   + ++
Sbjct: 815 NEKFKGLAICLSFATHENPHLLPDGLSTD-----IAIYCKLEAVEYTS-TSSFKFLIYRV 868

Query: 733 SHVESDHVFLG--SSIFAGENSCKRSDEFF---FHIDRSCCEVKKCGIHFVHAQRQ 783
             ++S+H+++G  S I  G+++   +  +    F     C EVK CGI FV+ Q +
Sbjct: 869 PSLKSNHLWMGFHSRIGFGKSNWLNNCGYLKVSFESSVPCMEVKYCGIRFVYDQDE 924



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 194/406 (47%), Gaps = 53/406 (13%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEG---VPFTELRYFEWHQFPLKTL-NILHWENLVS 69
            F KM  LRLL   G+     +H L G     + +L+   W  +PLK L +  + + ++ 
Sbjct: 331 AFMKMKNLRLLDVHGAYGDRKIH-LSGDFEFLYYKLKCLCWEGYPLKYLPSNFNPKKIIM 389

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L+MP S + +LW     L  L+ IDL +S+ LT+ PD +   NLE L L  C+SL++ H 
Sbjct: 390 LEMPQSSIKRLWGGRLELKELQFIDLSHSQYLTETPDFTGVPNLETLILEGCTSLSKVHP 449

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS--CHLRSTLP 187
           SI  L KL +L+L  C  L SLP SI  + L  LVL GCS L+  P++     HL S L 
Sbjct: 450 SIGVLKKLILLNLKDCNCLRSLPGSIGLESLNVLVLSGCSKLEKFPEIVGDMAHL-SKLG 508

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ----- 242
           L G  I E+P S   L+ +  L + +CK LE + S+I  L++L+++ +  C  L+     
Sbjct: 509 LDGTAIAEVPHSFANLTGLTFLSLRNCKNLEKLPSNINSLKYLKNLDLFGCSKLKSLPDS 568

Query: 243 --FLEMPSCNIDGTRSKEQPSSELKLKKCPR----------------------------- 271
             +LE       G  S  QP S ++L K  +                             
Sbjct: 569 LGYLECLEKLDLGKTSVRQPPSSIRLLKYLKVLSFHGIGPIAWQWPYKILSIFGITHDAV 628

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERL-PDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
             SLPS   +  SLT L++ DC   +++ P +   L +L  L I       +P  + QL 
Sbjct: 629 GLSLPSLNGLL-SLTELDLSDCNLSDKMIPADFYTLSSLEVLNIGRNNFVNIPASISQLP 687

Query: 331 LLSKLELKNCSELEYISSSIFKL-KSVESIEISNCSNLKGF--PEI 373
            L  L L +C  L+    ++ KL  ++  I  +NC++L+    PE+
Sbjct: 688 RLRFLYLDDCKNLK----ALRKLPTTIHEISANNCTSLETLSSPEV 729


>gi|147792369|emb|CAN74711.1| hypothetical protein VITISV_009242 [Vitis vinifera]
          Length = 1354

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 194/408 (47%), Gaps = 36/408 (8%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L SLPSS+  FKSL +L    C +LE  P+ + ++E+L +L ++GT IRE+P S
Sbjct: 954  LRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMESLIKLYLDGTAIREIPSS 1013

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            + +L  L  L L +C +  +LP  +    S  +L +  C NF +LPD +G L+ L+ L I
Sbjct: 1014 IQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFI 1073

Query: 512  K--GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
                +   ++P SL  L SL  L+L   NL+ IP  +  LSSLV+L L  N+  RIP+ +
Sbjct: 1074 GYLDSMNFQLP-SLSGLCSLRILMLQACNLREIPSEIYYLSSLVTLYLMGNHFSRIPDGI 1132

Query: 570  DPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
              L +LK+ DL     L  IPE        +PS  T L    D  +C  L+       + 
Sbjct: 1133 SQLYNLKHFDLSHCKMLQHIPE--------LPSGLTYL----DAHHCTSLENLSSQSSLL 1180

Query: 629  DGW----MKQSVNG-ETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMG 681
                    K  + G E       + P  N IP+W  HQ +G  I+++ P     N   +G
Sbjct: 1181 WSSLFKCFKSQIQGVEVGAIVQTFIPQSNGIPEWISHQKSGFQITMELPWSWYENDDFLG 1240

Query: 682  FAFCVVVACSVSECCRHES------VEDDRKCNLFDVVCDRRSEG--YDSYTSSYLGKIS 733
            F  C +     ++  +H S       + D    L DV+  ++S    YD   S+    I 
Sbjct: 1241 FVLCSLHVPFDTDTAKHRSFNCKLNFDHDSASFLLDVIRFKQSCECCYDEDESNQGWLIY 1300

Query: 734  HVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
            + +S+   +     + E    ++  F+ H      +V++CG HF++A 
Sbjct: 1301 YSKSN---IPKKYHSNEWRTLKA-SFYGHSSNRPGKVERCGFHFLYAH 1344



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 157/374 (41%), Gaps = 89/374 (23%)

Query: 10  INPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LHW 64
           +N  +F +M  LRLLK    + K  +  H      F+  EL Y  W  +P + L +  H 
Sbjct: 437 LNRESFKEMNRLRLLKIRSPRRKLFLEDHLPRDFAFSSYELTYLYWDGYPSEYLPMNFHA 496

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NLV L +  S + QLW   +    LK IDL YS  L K+PD S   NLEI         
Sbjct: 497 KNLVELLLRTSNIKQLWRGNKLHEKLKVIDLSYSVHLIKIPDFSSVPNLEI--------- 547

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS--CH 181
                          L L+ C +L  LP  I+  K+L+ L   GCS L+  P++      
Sbjct: 548 ---------------LTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGK 592

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           LR  L L G  I +LPSSI  L+ +  LL+  C +L  I            I I    +L
Sbjct: 593 LR-VLDLSGTAIMDLPSSISHLNGLQTLLLEDCSKLHKI-----------PIHICHLSSL 640

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           + L++ +CNI                       +  G                    +P 
Sbjct: 641 EVLDLGNCNI-----------------------MEGG--------------------IPS 657

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++ +L +L +L ++G     +P  + QL+ L  L L +C+ LE I      L+ +++   
Sbjct: 658 DICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIPELPSSLRLLDA-HG 716

Query: 362 SNCSNLKGFPEIPF 375
           SNC++ +  P +P 
Sbjct: 717 SNCTSSRA-PFLPL 729



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 21/233 (9%)

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            G+ + E+P     L L S L L++C  L  + SSIF  KS+ ++  S CS L+ FPEI  
Sbjct: 934  GSDMNEVPIMENPLELDS-LCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 992

Query: 376  -------CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
                     +DG+ I  IPSS+        L L++C  L +LP S+C   S  +L +  C
Sbjct: 993  DMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 1052

Query: 421  KKLERLPDELGNLEALEELRVE--GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
                +LPD LG L++LE L +    +   ++P      +L  L L+ C +   +PS +Y 
Sbjct: 1053 PNFNKLPDNLGRLQSLEHLFIGYLDSMNFQLPSLSGLCSLRILMLQAC-NLREIPSEIYY 1111

Query: 479  SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLE 530
              SL +L ++   +F R+PD I  L  LK   +     ++ +PE    L+ L+
Sbjct: 1112 LSSLVTLYLMG-NHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYLD 1163



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 97/198 (48%), Gaps = 29/198 (14%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +L L  C  LE LP  +   K L +L    C KLER P+  GN+  L  L + GT I ++
Sbjct: 547 ILTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGTAIMDL 606

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S++ L                         L +L + DC    ++P  I +L  L+VL
Sbjct: 607 PSSISHL-----------------------NGLQTLLLEDCSKLHKIPIHICHLSSLEVL 643

Query: 510 TIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            +    I E  +P  +  LSSL+ L L   +   IP ++NQLS L +L LS+ NNLE+IP
Sbjct: 644 DLGNCNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIP 703

Query: 567 ERLDPLSSLKYLDLFENN 584
           E   P SSL+ LD   +N
Sbjct: 704 EL--P-SSLRLLDAHGSN 718



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 24/220 (10%)

Query: 136  KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVG 192
            +L+ L L  CK+LTSLP+SI   K L  L   GCS L++ P++    + S + L   G  
Sbjct: 948  ELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ-DMESLIKLYLDGTA 1006

Query: 193  IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
            I E+PSSI+ L  +  L +  CK L N+  SI  L   +++ + RCPN  F ++P  N+ 
Sbjct: 1007 IREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPN--FNKLPD-NLG 1063

Query: 253  GTRSKEQ------PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              +S E        S   +L          SG C  + L    ++   N   +P E+  L
Sbjct: 1064 RLQSLEHLFIGYLDSMNFQLPSL-------SGLCSLRIL----MLQACNLREIPSEIYYL 1112

Query: 307  QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
             +L  L + G     +P+G+ QL  L   +L +C  L++I
Sbjct: 1113 SSLVTLYLMGNHFSRIPDGISQLYNLKHFDLSHCKMLQHI 1152



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 17/228 (7%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C    SLPS    FKSL +L    C   E  P+ + ++++L +L +DGTAIRE+P  
Sbjct: 954  LRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMESLIKLYLDGTAIREIPSS 1013

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            + +L  L  L L  C  L  +  SI  L S +++ +S C N    P+          + R
Sbjct: 1014 IQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD---------NLGR 1064

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEG 443
            + S  L+      L+S+   L     L SL I+  +   L  +P E+  L +L  L + G
Sbjct: 1065 LQS--LEHLFIGYLDSMNFQLPSLSGLCSLRILMLQACNLREIPSEIYYLSSLVTLYLMG 1122

Query: 444  TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
                 +P  ++QL  L    L  C   + +P    +   LT L+   C
Sbjct: 1123 NHFSRIPDGISQLYNLKHFDLSHCKMLQHIPE---LPSGLTYLDAHHC 1167



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 2/139 (1%)

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            +G+ + EVP     L L  L L+ C +  SLPS ++  KSL +L    C      P+ + 
Sbjct: 933  KGSDMNEVPIMENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 992

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN- 559
            ++E L  L + GTAIRE+P S+ +L  L+ L LS   NL  +PES+  L+S  +L +S  
Sbjct: 993  DMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 1052

Query: 560  NNLERIPERLDPLSSLKYL 578
             N  ++P+ L  L SL++L
Sbjct: 1053 PNFNKLPDNLGRLQSLEHL 1071



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   E LP G    K L +L    C   ER P+  GN+  L  L + GTAI +LP
Sbjct: 548 LTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGTAIMDLP 607

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +  L  L  L L++CS+L  I   I  L S+E +++ NC+ ++G      C++     
Sbjct: 608 SSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCNIMEGGIPSDICHL----- 662

Query: 384 ERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
               SS+ KLN +      +P+++     L +L +  C  LE++P+
Sbjct: 663 ----SSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIPE 704



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 27/160 (16%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L  L L+ C + E LP  +Y  K L +L    C    R P+  GN+  L+VL + GTAI 
Sbjct: 545 LEILTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGTAIM 604

Query: 518 EVPESLGQLSSLEWLVLSD--------------NNLQI------------IPESLNQLSS 551
           ++P S+  L+ L+ L+L D              ++L++            IP  +  LSS
Sbjct: 605 DLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCNIMEGGIPSDICHLSS 664

Query: 552 LVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
           L  L L   +   IP  ++ LS LK L+L   NNL++IPE
Sbjct: 665 LQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIPE 704



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 30/155 (19%)

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTS- 179
            +++ E  SSIQ L  L+ L L +CK+L +LP SI +    K LV+  C N   LP     
Sbjct: 1005 TAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGR 1064

Query: 180  -------------------------CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC 214
                                     C LR  L L    + E+PS I  LS++  L +   
Sbjct: 1065 LQSLEHLFIGYLDSMNFQLPSLSGLCSLR-ILMLQACNLREIPSEIYYLSSLVTLYLMG- 1122

Query: 215  KRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
                 I   I +L  L+   +  C  LQ + E+PS
Sbjct: 1123 NHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPS 1157


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 252/526 (47%), Gaps = 89/526 (16%)

Query: 283  KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
            KS  +L+II+  N     + PD L  +  L  LI++G T++ E+   L     L  + L 
Sbjct: 633  KSAVNLKIINLSNSLNLSQTPD-LTGIPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLV 691

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV- 390
            NC  +  + +++ +++S+E   +  CS L+ FP+I           +D +GI ++ SS+ 
Sbjct: 692  NCKSIRILPNNL-EMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIH 750

Query: 391  -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                   L +N C  L+S+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE  V G
Sbjct: 751  YLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSG 810

Query: 444  TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            T IR+                       LP+ +++ K L  L +  CK  + LP  +  L
Sbjct: 811  TSIRQ-----------------------LPASVFLLKKLKVLSLDGCKRIVVLPS-LSGL 846

Query: 504  EYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-N 560
              L+VL ++   +RE  +PE +G LSSL  L LS NN   +P+S+N+LS L  L L +  
Sbjct: 847  CSLEVLGLRSCNLREGALPEDIGWLSSLRSLDLSQNNFVSLPKSINRLSELEMLVLEDCT 906

Query: 561  NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP 620
             LE +PE    + ++ YL+    +L  IP+ ++   +S  SEF  L       NC +L  
Sbjct: 907  MLESLPEVPSKVQTV-YLNGC-ISLKTIPDPIK-LSSSKRSEFICL-------NCWELYN 956

Query: 621  NELSEIIKDGWMKQSVNG--ETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK 678
            +   E +    +++ + G         +  PGNEIP WF HQS GS+I ++ P  +    
Sbjct: 957  HNGQESMGLFMLERYLQGLSNPRTRFGIAVPGNEIPGWFNHQSKGSSIRVEVPSWS---- 1012

Query: 679  LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE-- 736
             MGF  CV  +             + +  +LF   C  ++ G ++Y S      + ++  
Sbjct: 1013 -MGFVACVAFS------------SNGQSPSLF---CHFKANGRENYPSPMCISCNSIQVL 1056

Query: 737  SDHVFLGSSIF-------AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
            SDH++L    F         ++    + E  FH  R+  +VK CG+
Sbjct: 1057 SDHIWLFYLSFDYLKELQEWQHGSFSNIELSFHSSRTGVKVKNCGV 1102



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 198/387 (51%), Gaps = 31/387 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E + N   FSKM+ LRLLK     N  +    E +    LR+ EWH +P K+L   L  +
Sbjct: 558 EARWNMKAFSKMSRLRLLKI---DNVQLFEGPEDLS-NNLRFLEWHSYPSKSLPAGLQVD 613

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L++ PDL+   NL+ L L  C+SL+
Sbjct: 614 ELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLS 673

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  KL+ ++L  CKS+  LP ++  + L+   L GCS L+  P +  + +   
Sbjct: 674 EVHPSLAHHKKLQHVNLVNCKSIRILPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLM 733

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI  L  +G L + +CK L++I SSI  L+ L+ + +  C  L+++
Sbjct: 734 VLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYI 793

Query: 245 --------EMPSCNIDGTRSKEQPSSEL--------KLKKCPRPESLP--SGQCMFKSLT 286
                    +   ++ GT  ++ P+S           L  C R   LP  SG C   SL 
Sbjct: 794 PENLGKVESLEEFDVSGTSIRQLPASVFLLKKLKVLSLDGCKRIVVLPSLSGLC---SLE 850

Query: 287 SLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            L +  C   E  LP+++G L +L  L +       LP+ + +L+ L  L L++C+ LE 
Sbjct: 851 VLGLRSCNLREGALPEDIGWLSSLRSLDLSQNNFVSLPKSINRLSELEMLVLEDCTMLES 910

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPE 372
           +     K   V+++ ++ C +LK  P+
Sbjct: 911 LPEVPSK---VQTVYLNGCISLKTIPD 934


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 201/757 (26%), Positives = 316/757 (41%), Gaps = 192/757 (25%)

Query: 8    IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWEN 66
            IQ+    F KM  LRLL   G  N   +     +P  +L YF W  +PL+ L +  H EN
Sbjct: 554  IQLTAEAFRKMNRLRLLIVKG--NMVQLSQDFELPCHDLVYFHWDNYPLEYLPSNFHVEN 611

Query: 67   LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
            LV L +  S +  LW+   N+                      A+ L++++L Y   L  
Sbjct: 612  LVELNLWYSNIEHLWEG--NMT---------------------ARKLKVINLSYSMHLVG 648

Query: 127  THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC-SNLKNLPKMTSCHLRST 185
                                S++S P       L+ L+L+GC SNL  L K+        
Sbjct: 649  I------------------SSISSAPN------LEILILKGCTSNLNGLEKLD------- 677

Query: 186  LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
               LG                       CK L ++  SIF L  L+++ +  C  L  + 
Sbjct: 678  ---LGY----------------------CKNLLSLPDSIFSLSSLQTLNLFECSKL--VG 710

Query: 246  MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD-ELG 304
             P  NI   ++ E     L L  C   ESLP+    F SL +L ++ C   +  PD  +G
Sbjct: 711  FPGINIGSLKALEY----LDLSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIG 766

Query: 305  NLQALNRLIIDG-TAIRELPE-GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            +  +L+ L + G + ++  P+  +G L  L  L+   C  LE + ++I  L S+ ++ + 
Sbjct: 767  SFSSLHTLSLMGCSKLKGFPDINIGSLKALQLLDFSRCRNLESLPNNIGSLSSLHTLLLV 826

Query: 363  NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
             CS LKGFP+I F ++           +L  ++C  LESLP S+    SL +L I +C K
Sbjct: 827  GCSKLKGFPDINFGSLKA-------LQLLDFSRCRNLESLPMSIYNLSSLKTLRITNCPK 879

Query: 423  LERLPD-ELG-------------------------NLEALE---------ELRVEGTGIR 447
            LE + + ELG                         +LEAL+         EL V      
Sbjct: 880  LEEMLEIELGVDWPLPPTTSHISNSAIIWYDGCFSSLEALKQKCPLSSLVELSVRKFYGM 939

Query: 448  EVPKSLAQLALSKLKLKKCSSFESLPS----RLYVSKSLTSLEIIDCKNFMR-LPDEIGN 502
            E         LS LK+    +F S+      +++   SL  L +  CK     +P +I N
Sbjct: 940  EKDILSGSFHLSSLKILSLGNFPSMAGGILDKIFHLSSLVKLSLTKCKPTEEGIPSDIRN 999

Query: 503  LEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN- 559
            L  L+ L++    + E  +   +  L+SLE L L  N+   IP  +++LS+L +L LS+ 
Sbjct: 1000 LSPLQQLSLHDCNLMEGKILNHICHLTSLEELHLGWNHFSSIPAGISRLSNLKALDLSHC 1059

Query: 560  NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
             NL++IPE     SSL++LD   +  DRI     S P+ +P           + NC K  
Sbjct: 1060 KNLQQIPEL---PSSLRFLD--AHCSDRIS----SSPSLLPIH--------SMVNCFK-- 1100

Query: 620  PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIP----------KWFRHQSTGS-TISL 668
             +E+ + +              I +   F GN I           +W  +++ G   +++
Sbjct: 1101 -SEIEDCV-------------VIHRYSSFWGNGIGIVIPRSSGILEWITYRNMGGHKVTI 1146

Query: 669  KTPQPTGY--NKLMGFAFCVVV---ACSVSECCRHES 700
            + P P  Y  + L GFA C V    AC   +  ++ES
Sbjct: 1147 ELP-PNWYENDDLWGFALCCVYVAPACESEDESQYES 1182


>gi|227438191|gb|ACP30585.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1301

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 181/367 (49%), Gaps = 36/367 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVH---SLEGVPFTELRYFEWHQFPLKTL-NIL 62
           E+ ++   F  M  LR L+  G  N   +H   + + +P   LR   WH +P++ + +  
Sbjct: 548 ELHVHENAFKGMCNLRFLEIFGC-NVVRLHLPKNFDYLP-PSLRLLSWHGYPMRCMPSKF 605

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             ENL+ L M    + +LW+ V +L  LK IDL  S  L ++PDLS A NLE L L +CS
Sbjct: 606 QPENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPDLSKAMNLERLCLDFCS 665

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SSI+ L KL  L+++ C +L ++PT I+    +  VL GCS L+  P++ +   
Sbjct: 666 SLLELPSSIRNLKKLRDLEMNFCTNLETIPTGIYLNSFEGFVLSGCSRLRRFPEILT--- 722

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK--LQFLESIRIHRCPN 240
                     I E PS +       ++L  +  R EN+   + +     +  +++   P+
Sbjct: 723 ---------NISESPSYLTL-----DVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPS 768

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L  +E+PS   +  + K      L ++ C   E+LP+G    +SL  L +  C      P
Sbjct: 769 L--VELPSSFQNLNKLK-----WLDIRNCINLETLPTG-INLQSLEYLVLSGCSRLRSFP 820

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           +   N+Q L    +  +AI E+P  + + + L  L + NC+ L  IS +I KLK ++   
Sbjct: 821 NISRNIQYLK---LSFSAIEEVPWWVEKFSALKDLNMANCTNLRRISLNILKLKHLKVAL 877

Query: 361 ISNCSNL 367
            SNC  L
Sbjct: 878 FSNCGAL 884



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 197/452 (43%), Gaps = 64/452 (14%)

Query: 240 NLQFLEMPSCNIDGTRSKEQ----PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
           NL+FLE+  CN+      +     P S   L     P      +   ++L  L ++   N
Sbjct: 561 NLRFLEIFGCNVVRLHLPKNFDYLPPSLRLLSWHGYPMRCMPSKFQPENLIKL-VMRAGN 619

Query: 296 FERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            E+L + + +L  L  + +     ++E+P+ L +   L +L L  CS L  + SSI  LK
Sbjct: 620 LEKLWEGVASLTCLKEIDLTLSVNLKEIPD-LSKAMNLERLCLDFCSSLLELPSSIRNLK 678

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            +  +E++ C+NL+  P         +GI         L+ CS+L   P  L       S
Sbjct: 679 KLRDLEMNFCTNLETIP---------TGIYLNSFEGFVLSGCSRLRRFPEILTNISESPS 729

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
              +D   +  L  E  NL           G+++   +L    +++L+L +  S   LPS
Sbjct: 730 YLTLDVLNMTNLRSE--NL---------WEGVQQPFTTL----MTRLQLSEIPSLVELPS 774

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLV 533
                  L  L+I +C N   LP  I NL+ L+ L + G + +R  P       ++++L 
Sbjct: 775 SFQNLNKLKWLDIRNCINLETLPTGI-NLQSLEYLVLSGCSRLRSFPNI---SRNIQYLK 830

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFEN-------NL 585
           LS + ++ +P  + + S+L  L ++N  NL RI   +  L  LK + LF N       N 
Sbjct: 831 LSFSAIEEVPWWVEKFSALKDLNMANCTNLRRISLNILKLKHLK-VALFSNCGALTEANW 889

Query: 586 DRIPEYLR----SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY 641
           D  P  L     +  +S+P  + S+   +D   C  LD        KD + +Q+V     
Sbjct: 890 DDSPSILAIATDTIHSSLPDRYVSI-AHLDFTGCFNLDH-------KDLFQQQTVFMRVI 941

Query: 642 ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQP 673
           ++      G  +P +F H++ G++++   P P
Sbjct: 942 LS------GEVVPSYFTHRNNGTSLT-NIPLP 966


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 215/472 (45%), Gaps = 69/472 (14%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMV-HSLEGVPFTELRYFEWHQFPLKTL 59
            +SK    +  +   F +MT L+ L+     N      SL  +   ++R  EW+ FP+  L
Sbjct: 570  LSKAEERLHTSESAFERMTNLQFLRIGSGYNGLYFPQSLNSIS-RKIRLLEWNDFPMTCL 628

Query: 60   -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
             +    + LV L M GSK+ +LWD +Q L +LK +DL+ SK L K+PDLS A NL  L L
Sbjct: 629  PSNFSPQFLVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIPDLSTATNLTYLCL 688

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKM 177
              CSSL    SSI     L  LDL  C  L +LP+SI +   L+   L+ CS+L  LP  
Sbjct: 689  RGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSSLVELPLS 748

Query: 178  --TSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSI---FKLQFLE 231
               + +L+S L L G   +++LPSSI    N+  L +  C  L N+ SSI     LQ L+
Sbjct: 749  IGNAINLKS-LNLGGCSSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSSIENAINLQVLD 807

Query: 232  ----------SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK--------CPRPE 273
                       I I    NL++L++  C    +   E PSS  KL K        C + +
Sbjct: 808  LKYCSSLVELPIFIGNATNLRYLDLSGC----SSLVELPSSVGKLHKLPKLTMVGCSKLK 863

Query: 274  SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
             LP    M  SL  L++  C + ++ P+   N++ L+ +   GT+I E+P  +     L 
Sbjct: 864  VLPININMV-SLRELDLTGCSSLKKFPEISTNIKHLHLI---GTSIEEVPSSIKSXXHLE 919

Query: 334  KLELKNCSELEY--------------------ISSSIFKLKSVESIEISNCSNLKGFPEI 373
             L +     L+                     I S + +L  +  + +  C NL   P++
Sbjct: 920  HLRMSYSQNLKKSPHAXXTITELHITDTEXLDIGSWVKELSHLGRLVLYGCKNLVSLPQL 979

Query: 374  PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
            P   +D           L  + C  LE L SSL    S T+   I+C KL +
Sbjct: 980  PGSLLD-----------LDASNCESLERLDSSLHNLNS-TTFRFINCFKLNQ 1019



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 184/402 (45%), Gaps = 42/402 (10%)

Query: 284  SLTSLEIIDCPNFERLPDELGNL-QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +LT L +  C + E LP  +GN    LN  + D T +  LP  +     L   +LK+CS 
Sbjct: 682  NLTYLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSS 741

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLES 401
            L  +  SI    +++S+ +  CS+LK  P         S I   P+   L L+ CS L +
Sbjct: 742  LVELPLSIGNAINLKSLNLGGCSSLKDLP---------SSIGNAPNLQNLYLDYCSSLVN 792

Query: 402  LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALS 459
            LPSS+    +L  L++  C  L  LP  +GN   L  L + G + + E+P S+ +L  L 
Sbjct: 793  LPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHKLP 852

Query: 460  KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
            KL +  CS  + LP  + +  SL  L++  C +  + P+   N+++L ++   GT+I EV
Sbjct: 853  KLTMVGCSKLKVLPININMV-SLRELDLTGCSSLKKFPEISTNIKHLHLI---GTSIEEV 908

Query: 520  PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
            P S+     LE L +S +  Q + +S +   ++  L +++     I   +  LS L  L 
Sbjct: 909  PSSIKSXXHLEHLRMSYS--QNLKKSPHAXXTITELHITDTEXLDIGSWVKELSHLGRLV 966

Query: 580  LFE-NNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLR----------NCLKLDPNELSEII 627
            L+   NL  +P+   S      S   SL RL   L           NC KL+   +  I 
Sbjct: 967  LYGCKNLVSLPQLPGSLLDLDASNCESLERLDSSLHNLNSTTFRFINCFKLNQEAIHLI- 1025

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
                       +T        PG E+P  F +++ G+ ++++
Sbjct: 1026 ----------SQTPCRLVAVLPGGEVPACFTYRAFGNFVTVE 1057



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 205/416 (49%), Gaps = 41/416 (9%)

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
           L+ +G  ++ +    E+++    + QFL   R          E+ S +  GT S      
Sbjct: 516 LAQLGREIVRNVSTSEHLTREPGQRQFLVDAR-------DICEVLSDDTAGTSS----VI 564

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP---NFERLPDELGNLQALNRLI-IDGTA 318
            + LK     E L + +  F+ +T+L+ +      N    P  L ++    RL+  +   
Sbjct: 565 GINLKLSKAEERLHTSESAFERMTNLQFLRIGSGYNGLYFPQSLNSISRKIRLLEWNDFP 624

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP---- 374
           +  LP        L KL ++  S+L+ +   I  L++++ +++ +  NLK  P++     
Sbjct: 625 MTCLPSNFSP-QFLVKLCMQG-SKLKKLWDGIQPLRNLKWMDLRSSKNLKKIPDLSTATN 682

Query: 375 ---FCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
               C    S +E +PSS+        L L+ C++L +LPSS+    +L + ++ DC  L
Sbjct: 683 LTYLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSSL 742

Query: 424 ERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
             LP  +GN   L+ L + G + ++++P S+     L  L L  CSS  +LPS +  + +
Sbjct: 743 VELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSSIENAIN 802

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNL 539
           L  L++  C + + LP  IGN   L+ L + G +++ E+P S+G+L  L  L +   + L
Sbjct: 803 LQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHKLPKLTMVGCSKL 862

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
           +++P ++N + SL  L L+  ++L++ PE     +++K+L L   +++ +P  ++S
Sbjct: 863 KVLPININMV-SLRELDLTGCSSLKKFPE---ISTNIKHLHLIGTSIEEVPSSIKS 914


>gi|12597847|gb|AAG60157.1|AC074360_22 downy mildew resistance protein RPP5, putative [Arabidopsis
           thaliana]
          Length = 1202

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 200/412 (48%), Gaps = 29/412 (7%)

Query: 7   EIQINPYTFSKMTELRLL--KFCGSKNKCMVH---SLEGVPFTELRYFEWHQFPLKTLNI 61
           E+ ++   F  M+ LR L  K  G K   + H   S + +P T L+   W +FP++ +  
Sbjct: 543 ELDVHERAFKGMSNLRFLEIKNFGLKEDGL-HLPPSFDYLPRT-LKLLCWSKFPMRCMPF 600

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L+M  SK+ +LW+ V  L  LK +DL  S  L  +PDLS A NLEIL+L +
Sbjct: 601 GFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKF 660

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ LNKL  LD+  CKSL  LPT  + K L RL L  CS LK  PK ++ 
Sbjct: 661 CESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFSTN 720

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-FLESIRIHRCP 239
              S L L    IE+ PS++  L N+ E  I   +  E        L  FL  +      
Sbjct: 721 --ISVLNLNLTNIEDFPSNLH-LENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLT 777

Query: 240 NLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           +L    +PS  ++ T S +  +   +L +  C   E+LP+G    +SL  L    C    
Sbjct: 778 SLHLENLPSL-VELTSSFQNLNQLKDLIIINCINLETLPTG-INLQSLDYLCFSGCSQLR 835

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
             P+   N+     L +D TAI E+P  + + + L++L + +CS L+ +   + KLK ++
Sbjct: 836 SFPEISTNISV---LYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKLKHLK 892

Query: 358 SIEISNCSN-----LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCSKLE 400
                NC       L G+P     +   NID +    +P  VL    C  L+
Sbjct: 893 EALFRNCGTLTRVELSGYPSGMEVMKADNIDTAS-SSLPKVVLSFLDCFNLD 943



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 191/431 (44%), Gaps = 67/431 (15%)

Query: 259 QPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIID 315
           +P + +KL+ +  +   L  G      L  +++    N + +PD  E  NL+ LN    +
Sbjct: 603 RPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKFCE 662

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
             ++ ELP  +  L  L  L++ NC  L+ + +  F LKS++ + + +CS LK FP+   
Sbjct: 663 --SLVELPSSIRNLNKLLNLDMLNCKSLKILPTG-FNLKSLDRLNLYHCSKLKTFPKFS- 718

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            NI          SVL LN  + +E  PS+L + ++L    I   +  E+  +E   L  
Sbjct: 719 TNI----------SVLNLN-LTNIEDFPSNLHL-ENLVEFRISKEESDEKQWEEEKPLTP 766

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
              + +  T             L+ L L+   S   L S       L  L II+C N   
Sbjct: 767 FLAMMLSPT-------------LTSLHLENLPSLVELTSSFQNLNQLKDLIIINCINLET 813

Query: 496 LPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
           LP  I NL+ L  L   G + +R  PE    +S L    L +  ++ +P  + + S+L  
Sbjct: 814 LPTGI-NLQSLDYLCFSGCSQLRSFPEISTNISVL---YLDETAIEEVPWWIEKFSNLT- 868

Query: 555 LKLSNNNLERIPERLDPLSSLKYLD--LFEN--NLDRIPEYLRSFPT--------SIPSE 602
            +LS N+  R+      +S LK+L   LF N   L R+   L  +P+        +I + 
Sbjct: 869 -ELSMNSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRVE--LSGYPSGMEVMKADNIDTA 925

Query: 603 FTSL-RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE-IPKWFRHQ 660
            +SL ++ +   +C  LDP  +             + E+ I   M F G E +P +F ++
Sbjct: 926 SSSLPKVVLSFLDCFNLDPETVLH-----------HQESIIFNYMLFTGKEEVPSYFTYR 974

Query: 661 STGSTISLKTP 671
           +TGS+ SL  P
Sbjct: 975 TTGSS-SLTIP 984


>gi|186479099|ref|NP_001117396.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332193249|gb|AEE31370.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1161

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 200/412 (48%), Gaps = 29/412 (7%)

Query: 7   EIQINPYTFSKMTELRLL--KFCGSKNKCMVH---SLEGVPFTELRYFEWHQFPLKTLNI 61
           E+ ++   F  M+ LR L  K  G K   + H   S + +P T L+   W +FP++ +  
Sbjct: 543 ELDVHERAFKGMSNLRFLEIKNFGLKEDGL-HLPPSFDYLPRT-LKLLCWSKFPMRCMPF 600

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L+M  SK+ +LW+ V  L  LK +DL  S  L  +PDLS A NLEIL+L +
Sbjct: 601 GFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKF 660

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ LNKL  LD+  CKSL  LPT  + K L RL L  CS LK  PK ++ 
Sbjct: 661 CESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFSTN 720

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-FLESIRIHRCP 239
              S L L    IE+ PS++  L N+ E  I   +  E        L  FL  +      
Sbjct: 721 --ISVLNLNLTNIEDFPSNLH-LENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLT 777

Query: 240 NLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           +L    +PS  ++ T S +  +   +L +  C   E+LP+G    +SL  L    C    
Sbjct: 778 SLHLENLPSL-VELTSSFQNLNQLKDLIIINCINLETLPTG-INLQSLDYLCFSGCSQLR 835

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
             P+   N+     L +D TAI E+P  + + + L++L + +CS L+ +   + KLK ++
Sbjct: 836 SFPEISTNISV---LYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKLKHLK 892

Query: 358 SIEISNCSN-----LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCSKLE 400
                NC       L G+P     +   NID +    +P  VL    C  L+
Sbjct: 893 EALFRNCGTLTRVELSGYPSGMEVMKADNIDTAS-SSLPKVVLSFLDCFNLD 943



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 191/431 (44%), Gaps = 67/431 (15%)

Query: 259 QPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIID 315
           +P + +KL+ +  +   L  G      L  +++    N + +PD  E  NL+ LN    +
Sbjct: 603 RPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKFCE 662

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
             ++ ELP  +  L  L  L++ NC  L+ + +  F LKS++ + + +CS LK FP+   
Sbjct: 663 --SLVELPSSIRNLNKLLNLDMLNCKSLKILPTG-FNLKSLDRLNLYHCSKLKTFPKFS- 718

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            NI          SVL LN  + +E  PS+L + ++L    I   +  E+  +E   L  
Sbjct: 719 TNI----------SVLNLN-LTNIEDFPSNLHL-ENLVEFRISKEESDEKQWEEEKPLTP 766

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
              + +  T             L+ L L+   S   L S       L  L II+C N   
Sbjct: 767 FLAMMLSPT-------------LTSLHLENLPSLVELTSSFQNLNQLKDLIIINCINLET 813

Query: 496 LPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
           LP  I NL+ L  L   G + +R  PE    +S L    L +  ++ +P  + + S+L  
Sbjct: 814 LPTGI-NLQSLDYLCFSGCSQLRSFPEISTNISVL---YLDETAIEEVPWWIEKFSNLT- 868

Query: 555 LKLSNNNLERIPERLDPLSSLKYLD--LFEN--NLDRIPEYLRSFPT--------SIPSE 602
            +LS N+  R+      +S LK+L   LF N   L R+   L  +P+        +I + 
Sbjct: 869 -ELSMNSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRVE--LSGYPSGMEVMKADNIDTA 925

Query: 603 FTSL-RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE-IPKWFRHQ 660
            +SL ++ +   +C  LDP  +             + E+ I   M F G E +P +F ++
Sbjct: 926 SSSLPKVVLSFLDCFNLDPETVLH-----------HQESIIFNYMLFTGKEEVPSYFTYR 974

Query: 661 STGSTISLKTP 671
           +TGS+ SL  P
Sbjct: 975 TTGSS-SLTIP 984


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 179/379 (47%), Gaps = 26/379 (6%)

Query: 7    EIQINPYTFSKMTELRLLKFCGS-----------KNKCMVHSLEGVPF--TELRYFEWHQ 53
            EI      F+++ +LRLLK   S           K +C V+    + F   +LRY  W+ 
Sbjct: 671  EIHFTSEGFTRINKLRLLKVYKSHISKDSKCTFKKEECKVYFSHNLKFHSNDLRYLYWYG 730

Query: 54   FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
            + LK+L +  + E L+   MP S + QLW  ++ L  LK ++L +S+ L ++PDLS A N
Sbjct: 731  YSLKSLPDNFNPERLLEFNMPYSHIKQLWKGIKVLEKLKFMELSHSQCLVEIPDLSRASN 790

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
            LE L L  C  L   H S+  LNKL  L L  C +L   P SI  K L+  +L GCS L+
Sbjct: 791  LERLVLEGCIHLCAIHPSLGVLNKLIFLSLRDCINLRHFPNSIELKSLQIFILSGCSKLE 850

Query: 173  NLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
              P++     HL S L L G+GIEELPSSI+    +  L + +CK L ++ +SI  L+ L
Sbjct: 851  KFPEIRGYMEHL-SELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPNSICNLESL 909

Query: 231  ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL---KKCPRPESLPSGQCMFKSLTS 287
            +++ +  C  L+ L      +   R     +    L   K     + L       +SL  
Sbjct: 910  KTLLLSDCSKLESLPQNFGKLKQLRKLYNQTFAFPLLLWKSSNSLDFLLPPLSTLRSLQD 969

Query: 288  LEIIDCPNFERLPDELGNLQALNRLI--IDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            L + DC N    P        L+     + G     LP  + QL  L+ L+L NC  L+ 
Sbjct: 970  LNLSDC-NIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQLTVLKLLNCRRLQA 1028

Query: 346  ISSSIFKLKSVESIEISNC 364
            I      L S+E I   NC
Sbjct: 1029 IPE---LLSSIEVINAHNC 1044



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 29/249 (11%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C      P+     KSL    +  C   E+ P+  G ++ L+ L +DG  I ELP
Sbjct: 818  LSLRDCINLRHFPNS-IELKSLQIFILSGCSKLEKFPEIRGYMEHLSELFLDGIGIEELP 876

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
              +     L  L+L NC EL  + +SI  L+S++++ +S+CS L                
Sbjct: 877  SSIEYAIGLVVLDLTNCKELRSLPNSICNLESLKTLLLSDCSKL---------------- 920

Query: 384  ERIPSSVLKLNKCSKL--ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            E +P +  KL +  KL  ++    L ++KS  SL+ +       LP  L  L +L++L +
Sbjct: 921  ESLPQNFGKLKQLRKLYNQTFAFPLLLWKSSNSLDFL-------LP-PLSTLRSLQDLNL 972

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCS--SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
                I + P+      +  LK    +  +F SLPS +     LT L++++C+    +P+ 
Sbjct: 973  SDCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQLTVLKLLNCRRLQAIPEL 1032

Query: 500  IGNLEYLKV 508
            + ++E +  
Sbjct: 1033 LSSIEVINA 1041



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 54/273 (19%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C  L   P+S+ + KSL    +  C KLE+ P+  G +E L EL ++G GI E  
Sbjct: 818  LSLRDCINLRHFPNSIEL-KSLQIFILSGCSKLEKFPEIRGYMEHLSELFLDGIGIEE-- 874

Query: 451  KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                                 LPS +  +  L  L++ +CK    LP+ I NLE LK L 
Sbjct: 875  ---------------------LPSSIEYAIGLVVLDLTNCKELRSLPNSICNLESLKTLL 913

Query: 511  IKG-TAIREVPESLGQLSSLEWLV-----------LSDNNLQIIPESLNQLSSLVSLKLS 558
            +   + +  +P++ G+L  L  L             S N+L  +   L+ L SL  L LS
Sbjct: 914  LSDCSKLESLPQNFGKLKQLRKLYNQTFAFPLLLWKSSNSLDFLLPPLSTLRSLQDLNLS 973

Query: 559  NNNLERIPE--RLDPLSSLKYLDLFENNLDRIPEYLRSFP-------------TSIPSEF 603
            + N+   P+   L  + SLK L+L  NN   +P  +   P              +IP   
Sbjct: 974  DCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQLTVLKLLNCRRLQAIPELL 1033

Query: 604  TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
            +S+ + ++  NC+ L+   +S      W++ ++
Sbjct: 1034 SSIEV-INAHNCIPLE--TISNQWHHTWLRHAI 1063


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 193/397 (48%), Gaps = 59/397 (14%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIE 384
            L +L LK C+ L  +   I  L+S+ +  +S CS LK  PEI          ++DG+ IE
Sbjct: 664  LEQLILKGCTSLSAVPDDI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIE 722

Query: 385  RIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNL 433
             +P+S+        L L  C  L SLP  +C   SLTSL+I++   C  L  LP+ LG+L
Sbjct: 723  ELPTSIKHLTGLTLLNLRDCKNLLSLPDVICT--SLTSLQILNVSGCSNLNELPENLGSL 780

Query: 434  EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID--- 489
            E L+EL    T I+E+P S+  L  L+ L L++C +  +LP    +  +LTSL+I++   
Sbjct: 781  ECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPD--VICTNLTSLQILNLSG 838

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
            C N   LP+ +G+L+ LK L    TAI +VPES+ QLS LE LVL         +  + L
Sbjct: 839  CSNLNELPENLGSLKCLKDLYASRTAISQVPESISQLSQLEELVL---------DGCSML 889

Query: 550  SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             SL  L  S         R+  + +   L    +N       +  +P++    F   + +
Sbjct: 890  QSLPGLPFSI--------RVVSVQNCPLLQGAHSN------KITVWPSAAGFSFLGRQGN 935

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVN-GETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
             D+     L    L       + + ++  GE +      +  NEIP W   +ST STI++
Sbjct: 936  NDIGQAFWLPDKHLLWPFYQTFFEGAIQRGEMF---EYGYRSNEIPAWLSRRSTESTITI 992

Query: 669  KTPQP-TGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
              P    G NK +  A C V  C  ++  + +S+ED+
Sbjct: 993  PLPHDLDGKNKWIKLALCFV--CEAAQ--KDDSLEDE 1025



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 174/378 (46%), Gaps = 56/378 (14%)

Query: 15  FSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMP 73
           FS M  LRLLK     N     SLE +   EL   EWH+ PLK+L +    + LV L   
Sbjct: 568 FSNMDNLRLLKI---YNVEFSGSLEYLS-DELSLLEWHKCPLKSLPSSFEPDKLVEL--- 620

Query: 74  GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
                          +L   +++      + P     + L +L+L  C  L +T      
Sbjct: 621 ---------------NLSESEIEELWEEIERP----LEKLAVLNLSDCQKLIKT-PDFDK 660

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGV 191
           +  LE L L  C SL+++P  I+ + L   +L GCS LK LP++      LR  L L G 
Sbjct: 661 VPNLEQLILKGCTSLSAVPDDINLRSLTNFILSGCSKLKKLPEIGEDMKQLRK-LHLDGT 719

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSI-FKLQFLESIRIHRCPNLQFLE----- 245
            IEELP+SIK L+ +  L +  CK L ++   I   L  L+ + +  C NL  L      
Sbjct: 720 AIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGS 779

Query: 246 ---MPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSLEIID-- 292
              +       T  +E P+S         L L++C    +LP   C   +LTSL+I++  
Sbjct: 780 LECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICT--NLTSLQILNLS 837

Query: 293 -CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C N   LP+ LG+L+ L  L    TAI ++PE + QL+ L +L L  CS L+ +    F
Sbjct: 838 GCSNLNELPENLGSLKCLKDLYASRTAISQVPESISQLSQLEELVLDGCSMLQSLPGLPF 897

Query: 352 KLKSVESIEISNCSNLKG 369
              S+  + + NC  L+G
Sbjct: 898 ---SIRVVSVQNCPLLQG 912



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 59/243 (24%)

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
            + L  L + DC+KL + PD                   +VP       L +L LK C+S
Sbjct: 638 LEKLAVLNLSDCQKLIKTPD-----------------FDKVPN------LEQLILKGCTS 674

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
             ++P  + + +SLT+  +  C    +LP+   +++ L+ L + GTAI E+P S+  L+ 
Sbjct: 675 LSAVPDDINL-RSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTG 733

Query: 529 LEWLVLSD--------------------------NNLQIIPESLNQLSSLVSLKLSNNNL 562
           L  L L D                          +NL  +PE+L  L  L  L  S   +
Sbjct: 734 LTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTAI 793

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
           + +P  +  L+ L  L+L      R  + L + P  I +  TSL++ ++L  C  L  NE
Sbjct: 794 QELPTSIKHLTDLTLLNL------RECKNLLTLPDVICTNLTSLQI-LNLSGCSNL--NE 844

Query: 623 LSE 625
           L E
Sbjct: 845 LPE 847


>gi|168063474|ref|XP_001783696.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664761|gb|EDQ51468.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 412

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 202/430 (46%), Gaps = 30/430 (6%)

Query: 89  SLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKS 147
           SL  +D+     L  LP+ L   ++L  L+L +C  LT   + +  L+ L  LD  +C+S
Sbjct: 2   SLTTLDMSKCSRLASLPNELDNLKSLTFLNLSWCWKLTSLPNELGNLSSLTTLDTSKCQS 61

Query: 148 LTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           L SLP  + +   L  L L GC  LK+LP      L +   L+   + E PS I   + +
Sbjct: 62  LASLPNELGNFTSLTSLNLSGCWELKSLPN----ELGNLTSLVSFNLSECPSLITLPNEL 117

Query: 207 GELL------IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQP 260
           G L+      +  C  L ++ + +  L  L S  +  C +L  L     N+    S    
Sbjct: 118 GNLISLTFLNLSECSFLISLPNELGNLTSLLSFNLSECSSLITLPNELGNLTSLTS---- 173

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAI 319
              L L  C +  SLP+      SLTSL + +C +   LP+ELGNL +L  L + +   +
Sbjct: 174 ---LNLSGCWKLISLPNKLGNLTSLTSLNVCECLDLITLPNELGNLTSLTSLNVCECLNL 230

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
             LP  L  L+ LS L++  C  L  + S +  L S+ S+ +S C  L   P       +
Sbjct: 231 ITLPNELRNLSSLSALDMSMCRSLTSLISELGNLTSLTSLNLSGCWKLISLPN------E 284

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              +    S  L L  CS+L SLP+ L    SLTSL +  C  L  LP+ELGNL +L  L
Sbjct: 285 LGNLTSFNS--LNLCDCSRLASLPNELGNLTSLTSLNLSGCSSLISLPNELGNLLSLTTL 342

Query: 440 RVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            +     +  +P  L  L +L+ L L  C   +SL + L    SL S  + +C +++ L 
Sbjct: 343 DMSKCRSLALLPNELGNLTSLTSLNLSGCWELKSLRNELGNLTSLVSFNLSECPSYIILL 402

Query: 498 DEIGNLEYLK 507
           +E+GNL  L 
Sbjct: 403 NELGNLTSLT 412



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 209/449 (46%), Gaps = 44/449 (9%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  LD+  CS L    + +  L  L  L+L  C  LTSLP  +              NL 
Sbjct: 3   LTTLDMSKCSRLASLPNELDNLKSLTFLNLSWCWKLTSLPNELG-------------NLS 49

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           +L  + +   +S        +  LP+ +   +++  L +  C  L+++ + +  L  L S
Sbjct: 50  SLTTLDTSKCQS--------LASLPNELGNFTSLTSLNLSGCWELKSLPNELGNLTSLVS 101

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
             +  CP+L  L     N+          + L L +C    SLP+      SL S  + +
Sbjct: 102 FNLSECPSLITLPNELGNLISL-------TFLNLSECSFLISLPNELGNLTSLLSFNLSE 154

Query: 293 CPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C +   LP+ELGNL +L  L + G   +  LP  LG L  L+ L +  C +L  + + + 
Sbjct: 155 CSSLITLPNELGNLTSLTSLNLSGCWKLISLPNKLGNLTSLTSLNVCECLDLITLPNELG 214

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFK 410
            L S+ S+ +  C NL   P           +  + S S L ++ C  L SL S L    
Sbjct: 215 NLTSLTSLNVCECLNLITLPN---------ELRNLSSLSALDMSMCRSLTSLISELGNLT 265

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSS 468
           SLTSL +  C KL  LP+ELGNL +   L + + + +  +P  L  L +L+ L L  CSS
Sbjct: 266 SLTSLNLSGCWKLISLPNELGNLTSFNSLNLCDCSRLASLPNELGNLTSLTSLNLSGCSS 325

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLS 527
             SLP+ L    SLT+L++  C++   LP+E+GNL  L  L + G   ++ +   LG L+
Sbjct: 326 LISLPNELGNLLSLTTLDMSKCRSLALLPNELGNLTSLTSLNLSGCWELKSLRNELGNLT 385

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
           SL    LS+    II   LN+L +L SL 
Sbjct: 386 SLVSFNLSECPSYIIL--LNELGNLTSLT 412



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 27/304 (8%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L+ L++  CS L  + + +  LKS+  + +S C  L   P       +   +  +  + L
Sbjct: 3   LTTLDMSKCSRLASLPNELDNLKSLTFLNLSWCWKLTSLPN------ELGNLSSL--TTL 54

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVP 450
             +KC  L SLP+ L  F SLTSL +  C +L+ LP+ELGNL +L    + E   +  +P
Sbjct: 55  DTSKCQSLASLPNELGNFTSLTSLNLSGCWELKSLPNELGNLTSLVSFNLSECPSLITLP 114

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             L  L +L+ L L +CS   SLP+ L    SL S  + +C + + LP+E+GNL  L  L
Sbjct: 115 NELGNLISLTFLNLSECSFLISLPNELGNLTSLLSFNLSECSSLITLPNELGNLTSLTSL 174

Query: 510 TIKGT-AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNN-NLERIP 566
            + G   +  +P  LG L+SL  L + +  +L  +P  L  L+SL SL +    NL  +P
Sbjct: 175 NLSGCWKLISLPNKLGNLTSLTSLNVCECLDLITLPNELGNLTSLTSLNVCECLNLITLP 234

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR--LSVDLRNCLKLD--PNE 622
             L  LSSL  LD+            RS  TS+ SE  +L    S++L  C KL   PNE
Sbjct: 235 NELRNLSSLSALDM---------SMCRSL-TSLISELGNLTSLTSLNLSGCWKLISLPNE 284

Query: 623 LSEI 626
           L  +
Sbjct: 285 LGNL 288


>gi|12322541|gb|AAG51270.1|AC027135_11 disease resistance gene, putative [Arabidopsis thaliana]
          Length = 1198

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 200/412 (48%), Gaps = 29/412 (7%)

Query: 7   EIQINPYTFSKMTELRLL--KFCGSKNKCMVH---SLEGVPFTELRYFEWHQFPLKTLNI 61
           E+ ++   F  M+ LR L  K  G K   + H   S + +P T L+   W +FP++ +  
Sbjct: 543 ELDVHERAFKGMSNLRFLEIKNFGLKEDGL-HLPPSFDYLPRT-LKLLCWSKFPMRCMPF 600

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L+M  SK+ +LW+ V  L  LK +DL  S  L  +PDLS A NLEIL+L +
Sbjct: 601 GFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKF 660

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ LNKL  LD+  CKSL  LPT  + K L RL L  CS LK  PK ++ 
Sbjct: 661 CESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFSTN 720

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-FLESIRIHRCP 239
              S L L    IE+ PS++  L N+ E  I   +  E        L  FL  +      
Sbjct: 721 --ISVLNLNLTNIEDFPSNLH-LENLVEFRISKEESDEKQWEEEKPLTPFLAMMLSPTLT 777

Query: 240 NLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           +L    +PS  ++ T S +  +   +L +  C   E+LP+G    +SL  L    C    
Sbjct: 778 SLHLENLPSL-VELTSSFQNLNQLKDLIIINCINLETLPTG-INLQSLDYLCFSGCSQLR 835

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
             P+   N+     L +D TAI E+P  + + + L++L + +CS L+ +   + KLK ++
Sbjct: 836 SFPEISTNISV---LYLDETAIEEVPWWIEKFSNLTELSMNSCSRLKCVFLHMSKLKHLK 892

Query: 358 SIEISNCSN-----LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCSKLE 400
                NC       L G+P     +   NID +    +P  VL    C  L+
Sbjct: 893 EALFRNCGTLTRVELSGYPSGMEVMKADNIDTAS-SSLPKVVLSFLDCFNLD 943



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 191/431 (44%), Gaps = 67/431 (15%)

Query: 259 QPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIID 315
           +P + +KL+ +  +   L  G      L  +++    N + +PD  E  NL+ LN    +
Sbjct: 603 RPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKFCE 662

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
             ++ ELP  +  L  L  L++ NC  L+ + +  F LKS++ + + +CS LK FP+   
Sbjct: 663 --SLVELPSSIRNLNKLLNLDMLNCKSLKILPTG-FNLKSLDRLNLYHCSKLKTFPKFS- 718

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            NI          SVL LN  + +E  PS+L + ++L    I   +  E+  +E   L  
Sbjct: 719 TNI----------SVLNLN-LTNIEDFPSNLHL-ENLVEFRISKEESDEKQWEEEKPLTP 766

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
              + +  T             L+ L L+   S   L S       L  L II+C N   
Sbjct: 767 FLAMMLSPT-------------LTSLHLENLPSLVELTSSFQNLNQLKDLIIINCINLET 813

Query: 496 LPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
           LP  I NL+ L  L   G + +R  PE    +S L    L +  ++ +P  + + S+L  
Sbjct: 814 LPTGI-NLQSLDYLCFSGCSQLRSFPEISTNISVL---YLDETAIEEVPWWIEKFSNLT- 868

Query: 555 LKLSNNNLERIPERLDPLSSLKYLD--LFEN--NLDRIPEYLRSFPT--------SIPSE 602
            +LS N+  R+      +S LK+L   LF N   L R+   L  +P+        +I + 
Sbjct: 869 -ELSMNSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRVE--LSGYPSGMEVMKADNIDTA 925

Query: 603 FTSL-RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE-IPKWFRHQ 660
            +SL ++ +   +C  LDP  +             + E+ I   M F G E +P +F ++
Sbjct: 926 SSSLPKVVLSFLDCFNLDPETVLH-----------HQESIIFNYMLFTGKEEVPSYFTYR 974

Query: 661 STGSTISLKTP 671
           +TGS+ SL  P
Sbjct: 975 TTGSS-SLTIP 984


>gi|297819854|ref|XP_002877810.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323648|gb|EFH54069.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1251

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 245/520 (47%), Gaps = 70/520 (13%)

Query: 10  INPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHW 64
           +NP  F  M  LR LK   S   N   +H  +GV     ELR   W QFPL +L    + 
Sbjct: 509 VNPLAFENMYNLRYLKIFSSNPGNHSALHLPKGVKSLPEELRLLHWEQFPLLSLPQDFNT 568

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
            NLV L M  SK+ +LW+  + L  LKRI L +S+ L  + +L  A+N+E++DL  C+ L
Sbjct: 569 RNLVILNMCYSKIQRLWEGTKELGMLKRIMLCHSQQLVDIQELQNARNIEVIDLQGCARL 628

Query: 125 TETHSSIQYLNKLEVLDLDRC---KSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS-C 180
            +   +  +   L V++L  C   KS   +P +I   YLK+  LR    +   P+  S  
Sbjct: 629 -QRFIATGHFQHLRVINLSGCIKIKSFPEVPPNIEELYLKQTGLRSIPTVIFSPQDNSFI 687

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           +       L     E+ S  + LS    +++Y              L++L+ + +  C  
Sbjct: 688 YDHQDHKFLN---REVSSESQSLS----IMVY--------------LKYLKVLDLSHCLG 726

Query: 241 LQFLEMPSCNI-----DGTRSKEQPS----SEL---KLKKCPRPESLPSGQCMFKSLTSL 288
           L+ +     N+      GT  +E PS    SEL    L+ C R E LP G     +L+SL
Sbjct: 727 LEDIHGIPKNLRKLYLGGTAIQELPSLMHLSELVVLDLENCKRLEKLPMG---IGNLSSL 783

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +++      L D  G  + L  L + GTAI+E+P  +  L+ L  L+L+NC  L ++  
Sbjct: 784 AVLNLSGCSELEDIQGIPRNLEELYLAGTAIQEVPSSIKHLSELVVLDLQNCKRLRHLPM 843

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL-------NKCSKLES 401
            I  LKS+ ++++++ S +    E+   +I  +GI  I  S L         N   + E 
Sbjct: 844 EIGNLKSLVTLKLTDPSGMS-IREVS-TSIIQNGISEINISNLNYLLFTVNENADQRREH 901

Query: 402 LP------SSLC----MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           LP      SSL      F +L SL + +   L  +P+E+ +L ++  L +   G  ++P+
Sbjct: 902 LPQPRLPSSSLHGLVPRFYALVSLSLFNA-SLMHIPEEICSLPSVVLLDLGRNGFSKIPE 960

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           S+ QL+ L  L+L+ C +  SLP    + +SL  L +  C
Sbjct: 961 SIKQLSKLHSLRLRHCRNLISLP---VLPQSLKLLNVHGC 997



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 145/314 (46%), Gaps = 72/314 (22%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIPS-------S 389
           SE + +S  ++ LK ++ +++S+C  L+    IP       + G+ I+ +PS        
Sbjct: 702 SESQSLSIMVY-LKYLKVLDLSHCLGLEDIHGIPKNLRKLYLGGTAIQELPSLMHLSELV 760

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           VL L  C +LE LP  +    SL  L +  C +LE   D  G    LEEL + GT I+EV
Sbjct: 761 VLDLENCKRLEKLPMGIGNLSSLAVLNLSGCSELE---DIQGIPRNLEELYLAGTAIQEV 817

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S+  L+                        L  L++ +CK    LP EIGNL+ L  L
Sbjct: 818 PSSIKHLS-----------------------ELVVLDLQNCKRLRHLPMEIGNLKSLVTL 854

Query: 510 TI---KGTAIREVPESLGQ-------LSSLEWLVL-----SDNNLQIIPE------SLNQ 548
            +    G +IREV  S+ Q       +S+L +L+      +D   + +P+      SL+ 
Sbjct: 855 KLTDPSGMSIREVSTSIIQNGISEINISNLNYLLFTVNENADQRREHLPQPRLPSSSLHG 914

Query: 549 L----SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFT 604
           L     +LVSL L N +L  IPE +  L S+  LDL  N   +IPE ++       S+  
Sbjct: 915 LVPRFYALVSLSLFNASLMHIPEEICSLPSVVLLDLGRNGFSKIPESIKQL-----SKLH 969

Query: 605 SLRLSVDLRNCLKL 618
           SLR    LR+C  L
Sbjct: 970 SLR----LRHCRNL 979



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 26/245 (10%)

Query: 335 LELKNCSELE-YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID-----GSGIERIPS 388
           ++L+ C+ L+ +I++  F+   +  I +S C  +K FPE+P  NI+      +G+  IP+
Sbjct: 620 IDLQGCARLQRFIATGHFQ--HLRVINLSGCIKIKSFPEVP-PNIEELYLKQTGLRSIPT 676

Query: 389 SVLKLNKCS-------------KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            +      S             ++ S   SL +   L  L+++D      L D  G  + 
Sbjct: 677 VIFSPQDNSFIYDHQDHKFLNREVSSESQSLSIMVYLKYLKVLDLSHCLGLEDIHGIPKN 736

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           L +L + GT I+E+P  +    L  L L+ C   E LP  +    +L+SL +++      
Sbjct: 737 LRKLYLGGTAIQELPSLMHLSELVVLDLENCKRLEKLPMGI---GNLSSLAVLNLSGCSE 793

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVS 554
           L D  G    L+ L + GTAI+EVP S+  LS L  L L +   L+ +P  +  L SLV+
Sbjct: 794 LEDIQGIPRNLEELYLAGTAIQEVPSSIKHLSELVVLDLQNCKRLRHLPMEIGNLKSLVT 853

Query: 555 LKLSN 559
           LKL++
Sbjct: 854 LKLTD 858


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 192/408 (47%), Gaps = 36/408 (8%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L SLPSS+  FKSL +L    C +LE  P+ + ++E L +L ++GT IRE+P S
Sbjct: 901  LRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAIREIPSS 960

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            + +L  L  L L +C +  +LP  +    S  +L +  C NF +LPD +G L+ L+ L +
Sbjct: 961  IQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFV 1020

Query: 512  K--GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
                +   ++P SL  L SL  L+L   NL+  P  +  LSSLV L L  N+  RIP+ +
Sbjct: 1021 GYLDSMNFQLP-SLSGLCSLRILMLQACNLREFPSEIYYLSSLVMLYLGGNHFSRIPDGI 1079

Query: 570  DPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
              L +LK+ DL     L  IPE        +PS  T L    D  +C  L+       + 
Sbjct: 1080 SQLYNLKHFDLSHCKMLQHIPE--------LPSGLTYL----DAHHCTSLENLSSQSSLL 1127

Query: 629  DGW----MKQSVNG-ETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMG 681
                   +K  + G E       + P  N IP+W  HQ +G  I+++ P     N   +G
Sbjct: 1128 WSSLFKCLKSQIQGVEVGAIVQTFIPESNGIPEWISHQKSGFQITMELPWSWYENDDFLG 1187

Query: 682  FAFCVVVACSVSECCRHES------VEDDRKCNLFDVVCDRRSEG--YDSYTSSYLGKIS 733
            F  C +     +E  +H S       + D    L DV+  ++S    YD   S+    I 
Sbjct: 1188 FVLCSLHVPLDTETAKHRSFNCKLNFDHDSASFLLDVIRFKQSCECCYDEDESNQGWLIY 1247

Query: 734  HVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
            + +S+   +     + E    ++  F+ H      +V++CG HF++A 
Sbjct: 1248 YSKSN---IPKKYHSNEWRTLKA-SFYGHSSNKPGKVERCGFHFLYAH 1291



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 21/233 (9%)

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            G+ + E+P     L L S L L++C  L  + SSIF  KS+ ++  S CS L+ FPEI  
Sbjct: 881  GSDMNEVPIMENPLELDS-LCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 939

Query: 376  -------CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
                     +DG+ I  IPSS+        L L++C  L +LP S+C   S  +L +  C
Sbjct: 940  DMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 999

Query: 421  KKLERLPDELGNLEALEELRVE--GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
                +LPD LG L++LE L V    +   ++P      +L  L L+ C +    PS +Y 
Sbjct: 1000 PNFNKLPDNLGRLQSLEHLFVGYLDSMNFQLPSLSGLCSLRILMLQAC-NLREFPSEIYY 1058

Query: 479  SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLE 530
              SL  L  +   +F R+PD I  L  LK   +     ++ +PE    L+ L+
Sbjct: 1059 LSSLVML-YLGGNHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYLD 1110



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 10/213 (4%)

Query: 136  KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGVGI 193
            +L+ L L  CK+LTSLP+SI   K L  L   GCS L++ P++     R   L L G  I
Sbjct: 895  ELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAI 954

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
             E+PSSI+ L  +  L +  CK L N+  SI  L   +++ + RCPN  F ++P  N+  
Sbjct: 955  REIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPN--FNKLPD-NLGR 1011

Query: 254  TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
             +S E            +  SL SG C  + L    ++   N    P E+  L +L  L 
Sbjct: 1012 LQSLEHLFVGYLDSMNFQLPSL-SGLCSLRIL----MLQACNLREFPSEIYYLSSLVMLY 1066

Query: 314  IDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            + G     +P+G+ QL  L   +L +C  L++I
Sbjct: 1067 LGGNHFSRIPDGISQLYNLKHFDLSHCKMLQHI 1099



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 17/228 (7%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C    SLPS    FKSL +L    C   E  P+ + +++ L +L +DGTAIRE+P  
Sbjct: 901  LRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAIREIPSS 960

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            + +L  L  L L  C  L  +  SI  L S +++ +S C N    P+          + R
Sbjct: 961  IQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD---------NLGR 1011

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEG 443
            + S  L+      L+S+   L     L SL I+  +   L   P E+  L +L  L + G
Sbjct: 1012 LQS--LEHLFVGYLDSMNFQLPSLSGLCSLRILMLQACNLREFPSEIYYLSSLVMLYLGG 1069

Query: 444  TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
                 +P  ++QL  L    L  C   + +P    +   LT L+   C
Sbjct: 1070 NHFSRIPDGISQLYNLKHFDLSHCKMLQHIPE---LPSGLTYLDAHHC 1114



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 2/139 (1%)

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            +G+ + EVP     L L  L L+ C +  SLPS ++  KSL +L    C      P+ + 
Sbjct: 880  KGSDMNEVPIMENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 939

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN- 559
            ++E L+ L + GTAIRE+P S+ +L  L+ L LS   NL  +PES+  L+S  +L +S  
Sbjct: 940  DMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 999

Query: 560  NNLERIPERLDPLSSLKYL 578
             N  ++P+ L  L SL++L
Sbjct: 1000 PNFNKLPDNLGRLQSLEHL 1018



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 45  ELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           EL Y  W  +PL+ L +  H +NLV L +  + + QLW   +    LK IDL YS  L K
Sbjct: 582 ELTYLYWDGYPLEYLPMNFHAKNLVELLLRNNNIKQLWRGNKLHKKLKVIDLSYSVHLIK 641

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHS 129
           +PD S   NLEIL L  C++  E  S
Sbjct: 642 IPDFSSVPNLEILTLEGCTTDWERTS 667



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 32/170 (18%)

Query: 109  LAQNLEILDLGYC--SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVL 165
            + Q++E L   Y   +++ E  SSIQ L  L+ L L +CK+L +LP SI +    K LV+
Sbjct: 937  IVQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVV 996

Query: 166  RGCSNLKNLPKMTS--------------------------CHLRSTLPLLGVGIEELPSS 199
              C N   LP                              C LR  L L    + E PS 
Sbjct: 997  SRCPNFNKLPDNLGRLQSLEHLFVGYLDSMNFQLPSLSGLCSLR-ILMLQACNLREFPSE 1055

Query: 200  IKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
            I  LS++  +L         I   I +L  L+   +  C  LQ + E+PS
Sbjct: 1056 IYYLSSL-VMLYLGGNHFSRIPDGISQLYNLKHFDLSHCKMLQHIPELPS 1104


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 189/395 (47%), Gaps = 56/395 (14%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIE 384
            L +L LK C+ L  +   I  L+S+ +  +S CS LK  PEI          ++DG+ IE
Sbjct: 664  LEQLILKGCTSLSAVPDDI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIE 722

Query: 385  RIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNL 433
             +P+S+        L L  C  L SLP  +C   SLTSL+I++   C  L  LP+ LG+L
Sbjct: 723  ELPTSIKHLTGLILLNLRDCKNLLSLPDVICT--SLTSLQILNVSGCSNLNELPENLGSL 780

Query: 434  EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID--- 489
            E L+EL    T I+E+P S+  L  L+ L L++C +  +LP    +  +LTSL+I++   
Sbjct: 781  ECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPD--VICTNLTSLQILNLSG 838

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
            C N   LP+ +G+LE L+ L   GTAI ++PES+ QLS L  LVL         +  ++L
Sbjct: 839  CSNLNELPENLGSLECLQELYASGTAISQIPESISQLSQLGELVL---------DGCSKL 889

Query: 550  SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             SL  L  S   +  +     PL    +     N +   P     F       F + +  
Sbjct: 890  QSLPRLPFS---IRAVSVHNCPLLQGAH----SNKITVWPSAAAGF------SFLNRQRH 936

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
             D+     L    L       + + ++  +        +  NEIP W   +ST STI++ 
Sbjct: 937  DDIAQAFWLPDKHLLWPFYQTFFEDAIRRDERFEYG--YRSNEIPAWLSRRSTESTITIP 994

Query: 670  TPQPT-GYNKLMGFAFCVVVACSVSECCRHESVED 703
             P    G +K +  A C +  C  ++  +H+S+ED
Sbjct: 995  LPHDVDGKSKWIKLALCFI--CEAAQ--KHDSLED 1025



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 177/378 (46%), Gaps = 56/378 (14%)

Query: 15  FSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMP 73
           FS M  LRLLK     N     SLE +   EL   EWH+ PLK+L +    + LV L   
Sbjct: 568 FSNMDNLRLLKI---YNVEFSGSLEYLS-DELSLLEWHKCPLKSLPSSFEPDKLVEL--- 620

Query: 74  GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
                          +L   +++      + P     + L +L+L  C  L +T      
Sbjct: 621 ---------------NLSESEIEELWEEIERP----LEKLAVLNLSDCQKLIKT-PDFDK 660

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGV 191
           +  LE L L  C SL+++P  I+ + L   +L GCS LK LP++      LR  L L G 
Sbjct: 661 VPNLEQLILKGCTSLSAVPDDINLRSLTNFILSGCSKLKKLPEIGEDMKQLRK-LHLDGT 719

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSI-FKLQFLESIRIHRCPNLQFLE----- 245
            IEELP+SIK L+ +  L +  CK L ++   I   L  L+ + +  C NL  L      
Sbjct: 720 AIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGS 779

Query: 246 ---MPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSLEIID-- 292
              +       T  +E P+S         L L++C    +LP   C   +LTSL+I++  
Sbjct: 780 LECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICT--NLTSLQILNLS 837

Query: 293 -CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C N   LP+ LG+L+ L  L   GTAI ++PE + QL+ L +L L  CS+L+ +    F
Sbjct: 838 GCSNLNELPENLGSLECLQELYASGTAISQIPESISQLSQLGELVLDGCSKLQSLPRLPF 897

Query: 352 KLKSVESIEISNCSNLKG 369
              S+ ++ + NC  L+G
Sbjct: 898 ---SIRAVSVHNCPLLQG 912


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 201/438 (45%), Gaps = 37/438 (8%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILH-WENLVSLKM 72
            FSK ++L+LL  C  +   +   L  +P + L+   W   PLKTL + +  + +V LK+
Sbjct: 554 AFSKTSQLKLLMLCDMQ---LPRGLNCLP-SSLKVLHWRGCPLKTLPLNNKLDEVVDLKL 609

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
           P S++ QLW   + L  LK I+L +SK L + PD   A NLE L L  C+SLTE H S+ 
Sbjct: 610 PHSRIEQLWRGTKLLEKLKSINLSFSKNLKQSPDFGGAPNLESLVLEGCTSLTEVHPSLV 669

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLG 190
              KL +++L  CK L +LP+ +    LK L L GCS  K LP+      HL S L L G
Sbjct: 670 RHKKLAMMNLKDCKRLKTLPSKMEMSSLKDLNLSGCSEFKYLPEFGESMEHL-SVLSLEG 728

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL------ 244
             I +LPSS+ CL  +  L + +CK L  +  +   L  L  + +  C  L  L      
Sbjct: 729 TAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGCSKLGCLPEGLKE 788

Query: 245 --EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPSGQCMFKSLTSLEIIDCP 294
              +   +  GT  +E PSS   L+         C +P S      +            P
Sbjct: 789 IKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPVSNSVSGFLLPFQWVFGNQQTP 848

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELEYISSSIFK 352
              RLP    NL +L R+ +    + E   P+G   L+ L  L+L   +    + S I  
Sbjct: 849 TAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSSLQFLDLTG-NNFVTLPSCISN 907

Query: 353 LKSVESIEISNCSNLKGFPEIP--FCNIDGSGIERIPSSVLKLNK-CSKLESLPSSLCMF 409
           L  +E + ++ C  LK  PE+P    ++D S    + +S    +K CS   S PS+    
Sbjct: 908 LTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTSLETSKFNPSKPCSLFASSPSNFHFS 967

Query: 410 KSLTSLEIIDCKKLERLP 427
           + L        + LE LP
Sbjct: 968 RELI-------RYLEELP 978



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 197/458 (43%), Gaps = 58/458 (12%)

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQL 329
            R E L  G  + + L S+ +    N ++ PD  G    L  L+++G T++ E+   L + 
Sbjct: 613  RIEQLWRGTKLLEKLKSINLSFSKNLKQSPD-FGGAPNLESLVLEGCTSLTEVHPSLVRH 671

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSG 382
              L+ + LK+C  L+ + S + ++ S++ + +S CS  K  PE       +   +++G+ 
Sbjct: 672  KKLAMMNLKDCKRLKTLPSKM-EMSSLKDLNLSGCSEFKYLPEFGESMEHLSVLSLEGTA 730

Query: 383  IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
            I ++PSS+        L L  C  L  LP +     SL  L +  C KL  LP+ L  ++
Sbjct: 731  IAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGCSKLGCLPEGLKEIK 790

Query: 435  ALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEII----D 489
            +LEEL   GT I+E+P S+  L  L  +    C      P    VS  L   + +     
Sbjct: 791  SLEELDASGTAIQELPSSVFYLENLKSISFAGCKK----PVSNSVSGFLLPFQWVFGNQQ 846

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLN 547
                 RLP    NL  L  + +    + E   P+    LSSL++L L+ NN   +P  ++
Sbjct: 847  TPTAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSSLQFLDLTGNNFVTLPSCIS 906

Query: 548  QLSSL----VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEF 603
             L+ L    ++L      L  +P R+  L +     L  +  +  P    S   S PS F
Sbjct: 907  NLTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTSLETSKFN--PSKPCSLFASSPSNF 964

Query: 604  TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG 663
               R                 E+I+  ++++     T     M  PG+EIP WF  Q   
Sbjct: 965  HFSR-----------------ELIR--YLEELPLPRTRF--EMLIPGSEIPSWFVPQKCV 1003

Query: 664  STISLKTPQPTGYNKLMGFAFCVVVACSVS--ECCRHE 699
            S   +  P     N+ +GFA C ++    +  E C HE
Sbjct: 1004 SLAKIPVPHNCPVNEWVGFALCFLLVSYANPPEACHHE 1041



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 83   DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
            D++ L  LK IDL +SK L + PD   A NLE L L  C+SLTE H S+    K  +++L
Sbjct: 1161 DIKLLEKLKSIDLSFSKNLKQSPDFDGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMNL 1220

Query: 143  DRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRSTLPLLGVGIEELPSSIK 201
            + CK L +LP+ +    LK L L GCS  + LP+   S    S L L    I +LPSS+ 
Sbjct: 1221 EDCKRLKTLPSKMEMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSLG 1280

Query: 202  CLSNIGEL 209
            CL  +  L
Sbjct: 1281 CLVGLAHL 1288



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 408  MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALS-KLKLKK 465
            + + L S+++   K L++ PD  G    LE L +EG T + EV  SL +      + L+ 
Sbjct: 1164 LLEKLKSIDLSFSKNLKQSPDFDGA-PNLESLVLEGCTSLTEVHPSLVRHKKPVMMNLED 1222

Query: 466  CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
            C   ++LPS++ +S SL  L +  C  F  LP+   ++E + VL ++ T I ++P SLG 
Sbjct: 1223 CKRLKTLPSKMEMS-SLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSLGC 1281

Query: 526  LSSLEWL 532
            L  L  L
Sbjct: 1282 LVGLAHL 1288



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239  PNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            PNL+ L +  C     +  +  + +    + L+ C R ++LPS   M  SL  L +  C 
Sbjct: 1189 PNLESLVLEGCTSLTEVHPSLVRHKKPVMMNLEDCKRLKTLPSKMEM-SSLKYLSLSGCS 1247

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
             FE LP+   +++ ++ L ++ T I +LP  LG L  L+ L+
Sbjct: 1248 EFEYLPEFGESMEQMSVLNLEETPITKLPSSLGCLVGLAHLD 1289


>gi|357468519|ref|XP_003604544.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505599|gb|AES86741.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1087

 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/255 (37%), Positives = 143/255 (56%), Gaps = 17/255 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNK----CMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
           +++++P TF+ M  L+ L    + ++     +   L  +P  ELRY  W  +PLK+L + 
Sbjct: 590 KLKLSPSTFANMRNLQFLYVPSTCDQDGFDLLPQGLHSLP-PELRYLSWMHYPLKSLPDE 648

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              E LV L +  S+V +LW  VQNL++LK + L +S+ L +LPD S A NLE+LD+ +C
Sbjct: 649 FSAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLFFSRYLKELPDFSKALNLEVLDIHFC 708

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           S LT  H SI  L KLE LDL  C SLT L +  H+  L+ L L+ C N++    +TS +
Sbjct: 709 SQLTSVHPSILSLEKLEKLDLSHCTSLTELTSDTHTSSLRYLNLKFCKNIRKFS-VTSVN 767

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS---SIFKLQFLESIRIHRC 238
           + + L L    +  LP+S  C S +  L + +C  +EN  S   ++ KLQ+LE   +  C
Sbjct: 768 M-TELDLRYTQVNTLPASFGCQSKLEILHLGNCS-IENFPSCFKNLIKLQYLE---VRYC 822

Query: 239 PNLQFLEM--PSCNI 251
             LQ L +  PS  I
Sbjct: 823 QKLQNLPVLPPSLEI 837



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 203/472 (43%), Gaps = 78/472 (16%)

Query: 337  LKNCSELEYISSSIFKLKSVESIEIS-----NCSNLKGFPEIP-FCNIDG-----SGIER 385
            LKN +  E I S   +L ++  +++S     N  NL+ F  +P  C+ DG      G+  
Sbjct: 569  LKNDTGTEAIRSIWMQLPTLRKLKLSPSTFANMRNLQ-FLYVPSTCDQDGFDLLPQGLHS 627

Query: 386  IPSSVLKLNKCSK-LESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVE 442
            +P  +  L+     L+SLP       S   L I+D    ++E+L   + NL  L+E+++ 
Sbjct: 628  LPPELRYLSWMHYPLKSLPDEF----SAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLF 683

Query: 443  GTG-IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI- 500
             +  ++E+P     L L  L +  CS   S+   +   + L  L++  C +   L  +  
Sbjct: 684  FSRYLKELPDFSKALNLEVLDIHFCSQLTSVHPSILSLEKLEKLDLSHCTSLTELTSDTH 743

Query: 501  -GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
              +L YL +   K   IR+   +   ++ L+   L    +  +P S    S L  L L N
Sbjct: 744  TSSLRYLNLKFCKN--IRKFSVTSVNMTELD---LRYTQVNTLPASFGCQSKLEILHLGN 798

Query: 560  NNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLRS-------------FPTSIPSE 602
             ++E  P     L  L+YL++       NL  +P  L               FP SI  +
Sbjct: 799  CSIENFPSCFKNLIKLQYLEVRYCQKLQNLPVLPPSLEILLAQECTALKTVLFP-SIAEQ 857

Query: 603  FTSLRLSVDLRNCLKLDPNELSEII--------KDGWMKQSVNGETYITK---------- 644
            F   R  V   NCLKLD + L+ I+        K  +   S + + +  K          
Sbjct: 858  FKENRKRVVFANCLKLDEHSLANIVFNAQINITKFAYQHVSASRDEFHNKFNNYNEDDSH 917

Query: 645  -SMY-FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVE 702
             ++Y +PG+ +P WF +++T   +++  P  T +++ +G+ FC V+  +         + 
Sbjct: 918  QALYVYPGSCVPDWFEYKTTTDYVAIDLPSSTSHSRFLGYIFCFVLGGN-------RLIV 970

Query: 703  DDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH-VESDHVFLGSSIFAGENSC 753
            D  K N+   +C       + Y   Y+ + S  + SDHVF+   I+  + SC
Sbjct: 971  DMLKFNI--TLCVEGQGKEEDYFELYISRPSSIIVSDHVFM---IYDQQCSC 1017


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 46/345 (13%)

Query: 49  FEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
           + W  FP    +I   + LV L++  + +  LW + ++L SL+R+DL +SK L + PD +
Sbjct: 584 YPWESFP----SIFELKMLVHLQLRHNSLPHLWTETKHLPSLRRLDLSWSKRLMRTPDFT 639

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
              NLE +DL  CS+L E H S+   +KL  L L+ CKSL   P  ++ + LK L ++GC
Sbjct: 640 GMPNLEYVDLYQCSNLEEVHHSLGCCSKLIQLILNGCKSLKKFP-RVNVESLKYLTVQGC 698

Query: 169 SNLKNLPKMTSCHLRS----TLPLLGVGIEELPSSI-KCLSNIGELLIYSCKRLENISSS 223
           S L+ +P++   H R      + +LG GI ELPSSI +  ++I +LL ++ K L  + SS
Sbjct: 699 SRLEKIPEI---HGRMKPEIQIHMLGSGIRELPSSITQYQTHITKLLSWNMKNLVALPSS 755

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ--------PSSELKLKKCPRPESL 275
           I +L+ L S+ +  C  L+ L     ++D  R  +         PSS ++L K       
Sbjct: 756 ICRLKSLVSLSVPGCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKLI----- 810

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL------IIDGTAIRELPEGLGQL 329
                MF         D  NFE  P   G L++L  L      +IDG     LPE +G L
Sbjct: 811 ---ILMFGGFK-----DVVNFEFPPVAEG-LRSLEHLDLTCCNLIDGG----LPEDIGSL 857

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           + L KL+L   +  E++  SI +L ++ S+++ +C  L   PE+P
Sbjct: 858 SSLKKLDLSR-NNFEHLPPSIAQLGALRSLDLKDCQRLTQLPELP 901



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 196/448 (43%), Gaps = 71/448 (15%)

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERL---PDELG--NLQALNRLIIDGTAIRELPEG 325
            R  SLP      K L SL  +D    +RL   PD  G  NL+ ++  +   + + E+   
Sbjct: 604  RHNSLPHLWTETKHLPSLRRLDLSWSKRLMRTPDFTGMPNLEYVD--LYQCSNLEEVHHS 661

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-----PFCNID- 379
            LG  + L +L L  C  L+        ++S++ + +  CS L+  PEI     P   I  
Sbjct: 662  LGCCSKLIQLILNGCKSLKKFPR--VNVESLKYLTVQGCSRLEKIPEIHGRMKPEIQIHM 719

Query: 380  -GSGIERIPSSVLKLN---------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
             GSGI  +PSS+ +               L +LPSS+C  KSL SL +  C KLE LP+E
Sbjct: 720  LGSGIRELPSSITQYQTHITKLLSWNMKNLVALPSSICRLKSLVSLSVPGCSKLESLPEE 779

Query: 430  LGNLEALEELRVEGTGIREVPKSLAQL----ALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            +G+L+ L  L    T I   P S+ +L     L     K   +FE  P    V++ L SL
Sbjct: 780  IGDLDNLRVLDARDTLILRPPSSIVRLNKLIILMFGGFKDVVNFEFPP----VAEGLRSL 835

Query: 486  EIID--CKNFMR--LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
            E +D  C N +   LP++IG+L  LK L +       +P S+ QL +L  L L D   L 
Sbjct: 836  EHLDLTCCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPPSIAQLGALRSLDLKDCQRLT 895

Query: 541  IIPESLNQLSSL-VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
             +PE   +LS L V   ++   +  +  +   L  LK  D   + +  +      F  ++
Sbjct: 896  QLPELPPELSELRVDCHMALKFIHDLVTKRKKLGRLKLDDAHNDTIYNL------FAHAL 949

Query: 600  PSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
                +S+R  +   + L L               +   G+ Y+ K        IP WF H
Sbjct: 950  FQNISSMRHDISASDSLSL---------------RVFTGQLYLVK--------IPSWFHH 986

Query: 660  QSTGSTISLKTPQPTGY--NKLMGFAFC 685
            Q   S++ +  P    Y  +K +GFA C
Sbjct: 987  QGWDSSVLVNLP-GNWYIPDKFLGFAVC 1013


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 200/412 (48%), Gaps = 60/412 (14%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N  TFSKM +L+LL          +H+L    G  F    LR+  W  +P K+L  
Sbjct: 550 EADWNLETFSKMCKLKLL---------YIHNLRLSVGPKFLPNALRFLNWSWYPSKSLPP 600

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+  + L +LK IDL YS  LT+ PD ++  NLE L L  
Sbjct: 601 CFQPDELTELSLVHSNIDHLWNGKKYLRNLKSIDLSYSINLTRTPDFTVFPNLEKLVLEG 660

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 661 CTNLVKIHPSIALLKRLKLCNFRNCKSIKSLPSELNMEFLETFDISGCSKLKKIPEFVGQ 720

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI                 E++S S+ +L  L  I I   P
Sbjct: 721 TKRLSKLCLGGTAVEKLPSSI-----------------EHLSESLVELD-LSGIVIREQP 762

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
           +  F +         ++    S  L  +K P P   L +    F SLT L++ DC   E 
Sbjct: 763 HSLFFK---------QNFRVSSFGLFPRKSPHPLIPLLASLKQFSSLTELKLNDCNLCEG 813

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY---ISSSIFKLK 354
            +P+++G+L +L +L + G     LP  +  L+ L  + ++NC+ L+    + +S + L 
Sbjct: 814 EIPNDIGSLSSLRKLELRGNNFVSLPASIHLLSKLEVITVENCTRLQQLPELPASDYIL- 872

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
               ++  NC++L+ FP+ P        + RI +  L    CS LE+   SL
Sbjct: 873 ----VKTDNCTSLQVFPDPP-------DLCRIGNFELTCMNCSSLETHRRSL 913



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 224/491 (45%), Gaps = 75/491 (15%)

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-FCNIDGS 381
            P+ L +L+L+        S ++++ +    L++++SI++S   NL   P+   F N++  
Sbjct: 604  PDELTELSLVH-------SNIDHLWNGKKYLRNLKSIDLSYSINLTRTPDFTVFPNLEK- 655

Query: 382  GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                     L L  C+ L  +  S+ + K L      +CK ++ LP EL N+E LE   +
Sbjct: 656  ---------LVLEGCTNLVKIHPSIALLKRLKLCNFRNCKSIKSLPSEL-NMEFLETFDI 705

Query: 442  EG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL-YVSKSLTSLEIIDCKNFMRLPD 498
             G + ++++P+ + Q   LSKL L   ++ E LPS + ++S+SL  L++         P 
Sbjct: 706  SGCSKLKKIPEFVGQTKRLSKLCLGG-TAVEKLPSSIEHLSESLVELDLSGIV-IREQPH 763

Query: 499  EIGNLEYLKVLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL--QIIPESLNQL 549
             +   +  +V +  G   R+ P        SL Q SSL  L L+D NL    IP  +  L
Sbjct: 764  SLFFKQNFRVSSF-GLFPRKSPHPLIPLLASLKQFSSLTELKLNDCNLCEGEIPNDIGSL 822

Query: 550  SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSLR 607
            SSL  L+L  NN   +P  +  LS L+ + + EN   L ++PE        +P+   S  
Sbjct: 823  SSLRKLELRGNNFVSLPASIHLLSKLEVITV-ENCTRLQQLPE--------LPA---SDY 870

Query: 608  LSVDLRNCLKL----DPNELSEIIKDGWMKQSVNGETYITK-------SMYFPGNEIPKW 656
            + V   NC  L    DP +L  I    +    +N  +  T            PG EIP+W
Sbjct: 871  ILVKTDNCTSLQVFPDPPDLCRI--GNFELTCMNCSSLETHRRSLECLEFVIPGREIPEW 928

Query: 657  FRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHES-VEDDRKCNLFDVVCD 715
            F +QS G +++ K P     +K +GFA C ++    +     E+ + D   C    + C 
Sbjct: 929  FNNQSVGDSVTEKLPSDACNSKCIGFAVCALIVPQDNPSAFPENPLLDPDTCR---IGCH 985

Query: 716  RRSEGYDSYTSSYLGKISHVESDH--VFLGSSIFAGENSCKRSDEFFFHIDRS-----CC 768
              + G  S   ++  ++    SDH  +F+  S+F      +    F F I R+     C 
Sbjct: 986  WNNYGVYSLCQNF--RVRQFVSDHLWLFVLRSLFWKLEK-RLEVNFVFKITRAVGNNRCI 1042

Query: 769  EVKKCGIHFVH 779
            +VKKCG+  ++
Sbjct: 1043 KVKKCGVRALY 1053


>gi|297850934|ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339190|gb|EFH69607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 182/672 (27%), Positives = 281/672 (41%), Gaps = 136/672 (20%)

Query: 101  LTKLPDLSLAQNLEILDLGYCS-SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
            L  LP   LA+ L +LDL        +T  S +    L+V++L  C SL ++P   +   
Sbjct: 735  LENLPPDILARQLGVLDLSESGVRRVQTLRSKKGDENLKVVNLRGCHSLEAIPDLSNHIA 794

Query: 160  LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
            L++LVL  C    NL  +   H                   + + N+G+LL    +R  +
Sbjct: 795  LEKLVLERC----NL--LVKVH-------------------RSVGNLGKLLQLDLRRCSS 829

Query: 220  ISS---SIFKLQFLESIRIHRCPNLQFL-----EMPSCN---IDGTRSKEQPSSELKLKK 268
            +S     +  L+ LE + +  C NL  L      MP      +DGT     P S  +L+K
Sbjct: 830  LSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELLLDGTAISNLPDSIFRLQK 889

Query: 269  CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
                            L  L ++ C + + LP  +G L +L  L +D TA+R LP  +G 
Sbjct: 890  ----------------LEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTALRNLPISIGD 933

Query: 329  LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF------CNIDGSG 382
            L  L KL L  C+ L  I  SI KL S++ + I    N     E+P       C  D S 
Sbjct: 934  LKNLQKLHLMRCTSLSKIPDSINKLISLKELFI----NGSAVEELPLDTGSLLCLKDLSA 989

Query: 383  -----IERIPSSV-------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
                 ++++PSS+             + +E+LP  +     +  LE+I+CK L+RLP+ +
Sbjct: 990  GDCKFLKQVPSSIGGLNSLLQLQLNGTPIEALPKEIGALHFIRKLELINCKFLKRLPNSI 1049

Query: 431  GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
            G+++ L  L + G+ I E+P+   +L  L +L++  C   + LP      KSL  L + +
Sbjct: 1050 GDMDTLYSLNLVGSNIEELPEDFGKLENLVELRMSNCKMLKRLPKSFGDLKSLHRLYMQE 1109

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIR-----------------EVPESLGQLSSLEWL 532
              +   LPD  GNL  L VL +    +R                 E+P S   L SLE L
Sbjct: 1110 T-SVAELPDNFGNLSNLMVLKMLKKPLRRSSESEAPGTSEEPRFVELPHSFSNLLSLEEL 1168

Query: 533  VLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDR 587
                  +   + + L +LSSL+ L L NN    +P  L  LS+LK L L +      L  
Sbjct: 1169 DARSWRISGKMRDDLEKLSSLMILNLGNNYFHSLPSSLVGLSNLKELLLCDCRELKGLPP 1228

Query: 588  IPEYLRSFPT----SIPSEFTSLRLSV----DLRNCLKL-DPNELSEI--IKDGWM---- 632
            +P  L         S+ S F   +L +    +L NC+K+ D   L  +  +K  +M    
Sbjct: 1229 LPWKLEQLNLENCFSLDSIFDLSKLKILHELNLTNCVKVVDIPGLEHLTALKKLYMSGCN 1288

Query: 633  ---------------KQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN 677
                           K+       + +++  PGN +P WF   S G       P      
Sbjct: 1289 SSCSFPREDFIHNVKKRLSKASLKMLRNLSLPGNRVPDWF---SQGPVTFSAQPN----R 1341

Query: 678  KLMGFAFCVVVA 689
            +L G    VVVA
Sbjct: 1342 ELRGVILAVVVA 1353



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 201/435 (46%), Gaps = 23/435 (5%)

Query: 160  LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPS--SIKCLSNIGELLIYSCKRL 217
            LK +  +GC  L+NLP          L L   G+  + +  S K   N+  + +  C  L
Sbjct: 725  LKWIQWKGCP-LENLPPDILARQLGVLDLSESGVRRVQTLRSKKGDENLKVVNLRGCHSL 783

Query: 218  ENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
            E I      +  LE + + RC  L  +     N+           +L L++C        
Sbjct: 784  EAIPDLSNHIA-LEKLVLERCNLLVKVHRSVGNLGKLL-------QLDLRRCSSLSEFLV 835

Query: 278  GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
                 K L  L +  C N   LP+ +G++  L  L++DGTAI  LP+ + +L  L KL L
Sbjct: 836  DVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELLLDGTAISNLPDSIFRLQKLEKLSL 895

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
              C  ++ + S I KL S+E + + + +       +P    D   +++     L L +C+
Sbjct: 896  MGCRSIQELPSCIGKLTSLEDLYLDDTA----LRNLPISIGDLKNLQK-----LHLMRCT 946

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL 456
             L  +P S+    SL  L  I+   +E LP + G+L  L++L   +   +++VP S+  L
Sbjct: 947  SLSKIPDSINKLISLKEL-FINGSAVEELPLDTGSLLCLKDLSAGDCKFLKQVPSSIGGL 1005

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
                      +  E+LP  +     +  LE+I+CK   RLP+ IG+++ L  L + G+ I
Sbjct: 1006 NSLLQLQLNGTPIEALPKEIGALHFIRKLELINCKFLKRLPNSIGDMDTLYSLNLVGSNI 1065

Query: 517  REVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
             E+PE  G+L +L  L +S+   L+ +P+S   L SL  L +   ++  +P+    LS+L
Sbjct: 1066 EELPEDFGKLENLVELRMSNCKMLKRLPKSFGDLKSLHRLYMQETSVAELPDNFGNLSNL 1125

Query: 576  KYLDLFENNLDRIPE 590
              L + +  L R  E
Sbjct: 1126 MVLKMLKKPLRRSSE 1140


>gi|297800420|ref|XP_002868094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313930|gb|EFH44353.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1247

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 196/432 (45%), Gaps = 55/432 (12%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILH 63
            + E+ I+      M  L+ L      N  +   +   P  +L    W++FPLK L +   
Sbjct: 670  SGELLIDSKPLEGMRNLQYLSVLNWSNMDLPQGIVHFPH-KLISLRWYEFPLKCLPSNFK 728

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             E LV L M  SK+ +LW+  Q L SLK ++L  SK L ++PDLS A NLE ++L  CSS
Sbjct: 729  AEYLVELIMVNSKLEKLWERNQPLGSLKTMNLSNSKYLKEIPDLSNAINLEEVELSGCSS 788

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
            L    SSIQ   KL  LD+  C+ L S PT ++ K L+ L L GC NL+N P +   +L 
Sbjct: 789  LVALPSSIQNAIKLNYLDMSECRKLESFPTHLNLKSLEYLDLTGCLNLRNFPAIQMGNLY 848

Query: 184  STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
               PL                                  SIF+++  +       P L +
Sbjct: 849  G-FPL---------------------------------DSIFEIEVKDCFWNKNLPGLNY 874

Query: 244  LEMPSCNIDGTRSKEQPSSELKLK-KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            L+   C +     K  P   + L  +  + E L  G     SL  + + +C N   +PD 
Sbjct: 875  LD---CLMGCMPCKFSPEYLVSLDVRGNKLEKLWEGVQSLGSLEWMNLSECENLTEIPD- 930

Query: 303  LGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            L     L R  ++G  ++  LP  +  L  L  LE+K C+ LE + + +  L S++ +++
Sbjct: 931  LSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTRLEVLPTDV-NLSSLDILDL 989

Query: 362  SNCSNLKGFP----EIPFCNIDGSGIERIPS--------SVLKLNKCSKLESLPSSLCMF 409
            S CS+L+ FP     I +  +D + I  +P         +VL +  C  L+++  ++   
Sbjct: 990  SGCSSLRSFPLISWNIKWLYLDNTAIVEVPCCIENFSRLTVLMMYCCQSLKNIHPNIFRL 1049

Query: 410  KSLTSLEIIDCK 421
             SL  ++  DC+
Sbjct: 1050 TSLMLVDFTDCR 1061



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 250/537 (46%), Gaps = 47/537 (8%)

Query: 8    IQINPYTFSKMTELRLLK-FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
            + I+  +F  M  L+ L  F  S N  +   L  +P+ +LR  EW  FPLK+L +    +
Sbjct: 534  LSIDEKSFKGMDNLQYLSVFNCSINIKLPRGLFFLPY-KLRLLEWENFPLKSLPSTFKAK 592

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
             LV L M  SK+ +LW+  Q L  LK++++  SK L ++PDLS A NLE LDL  CSSL 
Sbjct: 593  YLVELIMVDSKLEKLWEGTQPLGRLKKMNMCGSKYLKEIPDLSKAINLEKLDLYGCSSLV 652

Query: 126  ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK--MTSCHLR 183
               SSIQ   KL  L+      + S P     + L+ L +   SN+ +LP+  +   H  
Sbjct: 653  TLPSSIQNAIKLRKLNCSGELLIDSKPLE-GMRNLQYLSVLNWSNM-DLPQGIVHFPHKL 710

Query: 184  STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             +L      ++ LPS+ K    + EL++ + K LE +     + Q L S++     N ++
Sbjct: 711  ISLRWYEFPLKCLPSNFKA-EYLVELIMVNSK-LEKLWE---RNQPLGSLKTMNLSNSKY 765

Query: 244  L-EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            L E+P        S      E++L  C    +LPS       L  L++ +C   E  P  
Sbjct: 766  LKEIPDL------SNAINLEEVELSGCSSLVALPSSIQNAIKLNYLDMSECRKLESFPTH 819

Query: 303  LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            L NL++L  L + G                  L L+N   ++  +   F L S+  IE+ 
Sbjct: 820  L-NLKSLEYLDLTGC-----------------LNLRNFPAIQMGNLYGFPLDSIFEIEVK 861

Query: 363  NCSNLKGFPEIPF--CNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIID 419
            +C   K  P + +  C +     +  P  ++ L+ + +KLE L   +    SL  + + +
Sbjct: 862  DCFWNKNLPGLNYLDCLMGCMPCKFSPEYLVSLDVRGNKLEKLWEGVQSLGSLEWMNLSE 921

Query: 420  CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
            C+ L  +PD L     L+   + G   +  +P ++  L  L  L++K C+  E LP+ + 
Sbjct: 922  CENLTEIPD-LSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTRLEVLPTDVN 980

Query: 478  VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            +S SL  L++  C +    P    N+++   L +  TAI EVP  +   S L  L++
Sbjct: 981  LS-SLDILDLSGCSSLRSFPLISWNIKW---LYLDNTAIVEVPCCIENFSRLTVLMM 1033



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 209/467 (44%), Gaps = 80/467 (17%)

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
           Y  KRL +I    FK             NLQ+L + +C+I+    +       KL+    
Sbjct: 528 YGEKRLLSIDEKSFK----------GMDNLQYLSVFNCSINIKLPRGLFFLPYKLRLLEW 577

Query: 272 P----ESLPSGQCMFKSLTSLEIIDCPN-FERLPDELGNLQALNRLIIDGTA-IRELPEG 325
                +SLPS    FK+   +E+I   +  E+L +    L  L ++ + G+  ++E+P+ 
Sbjct: 578 ENFPLKSLPS---TFKAKYLVELIMVDSKLEKLWEGTQPLGRLKKMNMCGSKYLKEIPD- 633

Query: 326 LGQLALLSKLELKNCSELEYISSSI---FKLKS--------VESIEISNCSNLKGFPEIP 374
           L +   L KL+L  CS L  + SSI    KL+         ++S  +    NL+    + 
Sbjct: 634 LSKAINLEKLDLYGCSSLVTLPSSIQNAIKLRKLNCSGELLIDSKPLEGMRNLQYLSVLN 693

Query: 375 FCNID-GSGIERIPSSVLKLN------KC-----------------SKLESLPSSLCMFK 410
           + N+D   GI   P  ++ L       KC                 SKLE L        
Sbjct: 694 WSNMDLPQGIVHFPHKLISLRWYEFPLKCLPSNFKAEYLVELIMVNSKLEKLWERNQPLG 753

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ-LALSKLKLKKCSS 468
           SL ++ + + K L+ +PD L N   LEE+ + G + +  +P S+   + L+ L + +C  
Sbjct: 754 SLKTMNLSNSKYLKEIPD-LSNAINLEEVELSGCSSLVALPSSIQNAIKLNYLDMSECRK 812

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPD-EIGNLEYLKVLTIKGTAIREVPESLGQLS 527
            ES P+ L + KSL  L++  C N    P  ++GNL    + +I    +++   +   L 
Sbjct: 813 LESFPTHLNL-KSLEYLDLTGCLNLRNFPAIQMGNLYGFPLDSIFEIEVKDCFWN-KNLP 870

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLD 586
            L +L   D  +  +P   +    LVSL +  N LE++ E +  L SL++++L E  NL 
Sbjct: 871 GLNYL---DCLMGCMPCKFSP-EYLVSLDVRGNKLEKLWEGVQSLGSLEWMNLSECENLT 926

Query: 587 RIPEY-----LRSFP-------TSIPSEFTSLR--LSVDLRNCLKLD 619
            IP+      L+ F         ++PS   +L+  L ++++ C +L+
Sbjct: 927 EIPDLSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTRLE 973



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 43/236 (18%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLA 457
           L+SLPS+    K L  L ++D  KLE+L +    L  L+++ + G+  ++E+P     + 
Sbjct: 582 LKSLPSTF-KAKYLVELIMVD-SKLEKLWEGTQPLGRLKKMNMCGSKYLKEIPDLSKAIN 639

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLE-----IIDCKNFMRLPDEIGNLEYLKVLTIK 512
           L KL L  CSS  +LPS +  +  L  L      +ID K      + + NL+YL VL   
Sbjct: 640 LEKLDLYGCSSLVTLPSSIQNAIKLRKLNCSGELLIDSKPL----EGMRNLQYLSVLNWS 695

Query: 513 GTAIREVPESL----GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
                ++P+ +     +L SL W       L+ +P +  +   LV L + N+ LE++ ER
Sbjct: 696 NM---DLPQGIVHFPHKLISLRWYEFP---LKCLPSNF-KAEYLVELIMVNSKLEKLWER 748

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
             PL SLK ++L  +      +YL+  P              DL N + L+  ELS
Sbjct: 749 NQPLGSLKTMNLSNS------KYLKEIP--------------DLSNAINLEEVELS 784


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 193/385 (50%), Gaps = 31/385 (8%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            ++R  +WH++    L +  + E L+ L M  SK+ +LW+  + L +LK + L YS  L +
Sbjct: 663  KIRSLKWHRYQNICLPSTFNPEFLIELDMRYSKLQKLWEGTKQLRNLKWMSLSYSIDLKE 722

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            LP+LS A NLE L L  CSSL E  SSI+ L  L++LDL  C SL  LP+  ++  L+ L
Sbjct: 723  LPNLSTATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSCSSLVELPSFGNATKLEIL 782

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISS 222
             L  CS+L  LP   + +    L L     + ELP SI   +N+ +L +  C  L  + S
Sbjct: 783  DLDYCSSLVKLPPSINANNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVKLPS 842

Query: 223  SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            SI  +  LE + +  C NL  +E+PS     +    Q    L +  C + E+LP      
Sbjct: 843  SIGDITDLEVLDLSNCSNL--VELPS-----SIGNLQKLIVLTMHGCSKLETLPIN-INL 894

Query: 283  KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            K+L++L + DC   +R P+   N++    L + GTAI+E+P  +   + L++  +   S 
Sbjct: 895  KALSTLYLTDCSRLKRFPEISTNIKY---LWLTGTAIKEVPLSIMSWSRLAEFRI---SY 948

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLES 401
             E +         +  +++S     K   E+P        ++R+    VL LN C+ L S
Sbjct: 949  FESLKEFPHAFDIITKLQLS-----KDIQEVP------PWVKRMSRLRVLSLNNCNNLVS 997

Query: 402  LPSSLCMFKSLTSLEIIDCKKLERL 426
            LP    +  SL  +   +CK LE+L
Sbjct: 998  LPQ---LSDSLDYIHADNCKSLEKL 1019



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 64/407 (15%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP------- 371
            ++ELP  L     L +L+L NCS L  + SSI KL S++ +++ +CS+L   P       
Sbjct: 720  LKELP-NLSTATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSCSSLVELPSFGNATK 778

Query: 372  ----EIPFCNIDGSGIERIPSSV-------LKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
                ++ +C    S + ++P S+       L L  CS+L  LP S+    +L  L +  C
Sbjct: 779  LEILDLDYC----SSLVKLPPSINANNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGC 834

Query: 421  KKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYV 478
              L +LP  +G++  LE L +   + + E+P S+  L  L  L +  CS  E+LP  + +
Sbjct: 835  SSLVKLPSSIGDITDLEVLDLSNCSNLVELPSSIGNLQKLIVLTMHGCSKLETLPININL 894

Query: 479  SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL-EWLVLSDN 537
             K+L++L + DC    R P+   N++YL    + GTAI+EVP S+   S L E+ +    
Sbjct: 895  -KALSTLYLTDCSRLKRFPEISTNIKYL---WLTGTAIKEVPLSIMSWSRLAEFRISYFE 950

Query: 538  NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFP 596
            +L+  P + + ++ L   +LS + ++ +P  +  +S L+ L L   NNL  +P+   S  
Sbjct: 951  SLKEFPHAFDIITKL---QLSKD-IQEVPPWVKRMSRLRVLSLNNCNNLVSLPQLSDSLD 1006

Query: 597  TSIPSEFTSLR----------LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
                    SL           + ++  NC KL+  E  ++I            T      
Sbjct: 1007 YIHADNCKSLEKLDCCFNNPDIRLNFPNCFKLN-QEARDLIM----------HTSPCIDA 1055

Query: 647  YFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFAFCVVVA 689
              PG ++P  F H++T G  + +K   +P PT     + F  C+++ 
Sbjct: 1056 MLPGTQVPACFNHRATSGDYLKIKLKESPFPTT----LRFKACIMLV 1098



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 185/393 (47%), Gaps = 98/393 (24%)

Query: 151  LPTSIHSKYLKRLVLR---------GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIK 201
            LP++ + ++L  L +R         G   L+NL  M+  +         + ++ELP+ + 
Sbjct: 677  LPSTFNPEFLIELDMRYSKLQKLWEGTKQLRNLKWMSLSY--------SIDLKELPN-LS 727

Query: 202  CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS 261
              +N+ EL + +C  L  + SSI KL  L+ + +  C +L  +E+PS             
Sbjct: 728  TATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSCSSL--VELPS------------- 772

Query: 262  SELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELG--NLQALNRLIIDG 316
                                F + T LEI+D   C +  +LP  +   NLQ L+  + + 
Sbjct: 773  --------------------FGNATKLEILDLDYCSSLVKLPPSINANNLQELS--LRNC 810

Query: 317  TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
            + + ELP  +G    L KL +K CS L  + SSI  +  +E +++SNCSNL   P     
Sbjct: 811  SRLIELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDLEVLDLSNCSNLVELP----- 865

Query: 377  NIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                S I  +    VL ++ CSKLE+LP ++ + K+L++L + DC +L+R P+   N++ 
Sbjct: 866  ----SSIGNLQKLIVLTMHGCSKLETLPININL-KALSTLYLTDCSRLKRFPEISTNIKY 920

Query: 436  LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP---------SRLYVSKS----- 481
            L    + GT I+EVP S+  ++ S+L   + S FESL          ++L +SK      
Sbjct: 921  L---WLTGTAIKEVPLSI--MSWSRLAEFRISYFESLKEFPHAFDIITKLQLSKDIQEVP 975

Query: 482  --------LTSLEIIDCKNFMRLPDEIGNLEYL 506
                    L  L + +C N + LP    +L+Y+
Sbjct: 976  PWVKRMSRLRVLSLNNCNNLVSLPQLSDSLDYI 1008


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 244/542 (45%), Gaps = 95/542 (17%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           ++V L +  +++T L  ++  L SL+ + L  ++L +   ++    +L  L+L   + LT
Sbjct: 208 SMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLN-GNQLT 266

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS 184
              + +  L  L+ L L     LTS+P  I     L+RL L G        ++TS     
Sbjct: 267 SVPAEVVQLTSLDTLRLG-GNQLTSVPADIGQLTSLRRLFLYGN-------QLTSV---- 314

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                       P+ I  L+++ EL  Y+ + L ++ + I +L  LE   + +    +  
Sbjct: 315 ------------PAEIAQLTSLRELGFYNSQ-LTSVPAEIGQLTSLEKWDLGKN---ELA 358

Query: 245 EMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +P+    +   R       EL+L    R  SLP+      SL  L ++ C     LP +
Sbjct: 359 SVPAEIGQLTALR-------ELRLDGN-RLTSLPAEIGQLASLKKL-LLGCNQLTSLPAD 409

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G L +L  L +DG  +  +P  +GQL  L KL+L + ++L  + + I +L S+  +   
Sbjct: 410 IGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSD-NQLTSVPTEIGQLTSLTEL--- 465

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSL 415
                          ++G+ +  +P+ + +L          S+L S+P+ +     LTSL
Sbjct: 466 --------------YLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQ---LTSL 508

Query: 416 EIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
           E  D  K  L  +P E+G L AL ELR++G  +  +P  + QLA     LKK        
Sbjct: 509 EKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA----SLKKL------- 557

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
                        ++ C     LP +IG L  L  L + G  +  VP  +GQL+SLE L 
Sbjct: 558 -------------LLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLD 604

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
           LSDN L  +P  + QL+SL  L L+ N L  +P  +  LS L+ L L  N L  +P  +R
Sbjct: 605 LSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIR 664

Query: 594 SF 595
             
Sbjct: 665 EL 666



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 167/355 (47%), Gaps = 59/355 (16%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L +L  L +D   +  +P  +GQL  L++L L N ++L  + + + +L S+++
Sbjct: 222 LPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNL-NGNQLTSVPAEVVQLTSLDT 280

Query: 359 IEISNC------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSS 405
           + +         +++     +    + G+ +  +P+ + +L          S+L S+P+ 
Sbjct: 281 LRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAE 340

Query: 406 LCMFKSLTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
           +     LTSLE  D  K  L  +P E+G L AL ELR++G  +  +P  + QLA     L
Sbjct: 341 IGQ---LTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA----SL 393

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           KK                     ++ C     LP +IG L  L  L + G  +  VP  +
Sbjct: 394 KKL--------------------LLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEI 433

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL+SLE L LSDN L  +P  + QL+SL  L L+ N L  +P  +  L+SL+ L  + +
Sbjct: 434 GQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNS 493

Query: 584 NLDRIPEYLRSFPT------------SIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
            L  +P  +    +            S+P+E   L     LR  L+LD N L+ +
Sbjct: 494 QLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQL---TALRE-LRLDGNRLTSL 544



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 15/138 (10%)

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           LE+ D      +P EIG L  +  L++    +  +P  +GQL+SL  L L +N L  +P 
Sbjct: 188 LELEDFDLTGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPA 247

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP-------- 596
            + QL+SL  L L+ N L  +P  +  L+SL  L L  N L  +P  +            
Sbjct: 248 EIGQLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLY 307

Query: 597 ----TSIPSE---FTSLR 607
               TS+P+E    TSLR
Sbjct: 308 GNQLTSVPAEIAQLTSLR 325


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 182/373 (48%), Gaps = 23/373 (6%)

Query: 244 LEMPSC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
           +E PS  N+    +KEQ   EL L      E LPS      SLT L  ++      LP+ 
Sbjct: 1   MERPSVQNLIAQAAKEQ-WKELNLSGMDLSE-LPSEIGNLTSLTDL-YLNRNQLSTLPEA 57

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            GNL +L  L +    +  LPE  G L  L  L+L N +++  +  SI  L S+ S+++S
Sbjct: 58  FGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNN-NQINALPESIGNLTSLTSLDLS 116

Query: 363 NCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCM 408
             + L   PE       + F +++ + +  +P SV  L          ++L++LP S   
Sbjct: 117 -ANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGN 175

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
             SLT L++ +  +L  LP+  GNL +L  L + G  I  +P+S+  L   +      + 
Sbjct: 176 LTSLTFLDLSE-NQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQ 234

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
             +LP  +    +LT L + + +    LP+  GNL  L  L + G  +  +PE+ G LSS
Sbjct: 235 LNTLPESIVNLTNLTDLYLSENQ-LNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSS 293

Query: 529 LEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           L +L L+ N L  +PES+ QL+ L  L L +N L  +P+ L  L+ LK LD+  N+L  +
Sbjct: 294 LTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGEL 353

Query: 589 -PEYLRSFPTSIP 600
            PE  R +    P
Sbjct: 354 PPEVKRKYTQPAP 366



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 42/319 (13%)

Query: 377 NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           N+ G  +  +PS +        L LN+ ++L +LP +     SLT L  +   +L  LP+
Sbjct: 22  NLSGMDLSELPSEIGNLTSLTDLYLNR-NQLSTLPEAFGNLTSLTHL-YLSANQLNALPE 79

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
             GNL +L  L++    I  +P+S+  L +L+ L L   +   +LP       +LTSL  
Sbjct: 80  AFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLS-ANQLNALPEAF---GNLTSLTF 135

Query: 488 IDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
           +D  +     LPD +GNL  LK L +    ++ +P+S G L+SL +L LS+N L  +PE+
Sbjct: 136 LDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEA 195

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
              LSSL  L LS N +  +PE +  L++L+YL L+ N L+ +PE + +      +  T 
Sbjct: 196 FGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNL-----TNLTD 250

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE---IPKWFRHQST 662
           L LS +  N L      LS +                   +Y  GN+   +P+ F + S+
Sbjct: 251 LYLSENQLNALPETFGNLSSLT-----------------DLYLSGNQLNALPETFGNLSS 293

Query: 663 GSTISLKTPQPTGYNKLMG 681
            + + L + Q TG  + +G
Sbjct: 294 LTYLYLNSNQLTGLPESIG 312



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 42/297 (14%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           LK+  +++  L + + NL SL  +DL  ++ L  LP+            G  +SLT    
Sbjct: 90  LKLNNNQINALPESIGNLTSLTSLDLSANQ-LNALPEA----------FGNLTSLT---- 134

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
                     LDL+    LT LP S+ +   LK L L   + LK LP   S    ++L  
Sbjct: 135 ---------FLDLN-SNPLTGLPDSVGNLTSLKHLYLNN-NQLKALPD--SAGNLTSLTF 181

Query: 189 LGVGIEELPSSIKCLSNIGEL--LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
           L +   +L +  +   N+  L  L  S  ++  +  SI  L  L  + +    N Q   +
Sbjct: 182 LDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLW---NNQLNTL 238

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           P   ++ T   +   SE +L       +LP       SLT L  +       LP+  GNL
Sbjct: 239 PESIVNLTNLTDLYLSENQLN------ALPETFGNLSSLTDL-YLSGNQLNALPETFGNL 291

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
            +L  L ++   +  LPE +GQL  L +L L + ++L  +   + KL  ++ ++I N
Sbjct: 292 SSLTYLYLNSNQLTGLPESIGQLNKLKELILYD-NKLLTLPQELTKLTQLKKLDIRN 347


>gi|227438255|gb|ACP30617.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1297

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 192/380 (50%), Gaps = 39/380 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC-------MVHSLEGVPFTELRYFEWHQFPLKTL 59
           E+Q++   F  M  L  L+   +K +        +  S + +P  +L+   W  +P++ +
Sbjct: 630 ELQVHETAFKGMRNLHFLEIYSNKVRVVNGDKLKLPKSFDWLP-PKLKLLCWSGYPMRCM 688

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            + L  + LV LKM  SK+ +LW  V +L  L  +DL  S  L ++PDL+ A NLE L+L
Sbjct: 689 PSTLCTDRLVKLKMRNSKLERLWKGVMSLTCLIEMDLCGSHDLKEIPDLTTATNLETLNL 748

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
             C SL E  SSI+ LNKL  LD+  CK L +LPT I+ K L  + L  CS L+  PK++
Sbjct: 749 QSCRSLVELPSSIRNLNKLIKLDMQFCKKLKTLPTGINLKSLDHINLSFCSQLRTFPKIS 808

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK---------LQF 229
           +    S L L    + E P+++  L N+ +L  +  K   N    +F+            
Sbjct: 809 TN--ISYLFLEETSVVEFPTNLH-LKNLVKL--HMSKVTTNKQWKMFQPLTPFMPMLSPT 863

Query: 230 LESIRIHRCPNLQFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
           L  + +   P+L  +E+PS   N++  R       +LK+ +C   E+LP+G    KSL S
Sbjct: 864 LTELYLFNIPSL--VELPSSFRNLNKLR-------DLKISRCTNLETLPTG-INLKSLES 913

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L+   C      P+   N+  LN   +  TAI E+P  +   + L  L ++ CS+LEY+ 
Sbjct: 914 LDFTKCSRLMTFPNISTNISVLN---LSYTAIEEVPWWVEIFSKLKNLNMECCSKLEYVH 970

Query: 348 SSIFKLKSVESIEISNCSNL 367
            +I KL  + +++ S+C  L
Sbjct: 971 PNISKLPRL-AVDFSHCEAL 989



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 184/437 (42%), Gaps = 88/437 (20%)

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            G  +R +P  L    L+ KL+++N S+LE +   +  L  +  +++    +LK  P++  
Sbjct: 682  GYPMRCMPSTLCTDRLV-KLKMRN-SKLERLWKGVMSLTCLIEMDLCGSHDLKEIPDL-- 737

Query: 376  CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                 + +E      L L  C  L  LPSS+     L  L++  CKKL+ LP  + NL++
Sbjct: 738  --TTATNLE-----TLNLQSCRSLVELPSSIRNLNKLIKLDMQFCKKLKTLPTGI-NLKS 789

Query: 436  LEELR---------------------VEGTGIREVPKSLAQLALSKLKLKKCSS------ 468
            L+ +                      +E T + E P +L    L KL + K ++      
Sbjct: 790  LDHINLSFCSQLRTFPKISTNISYLFLEETSVVEFPTNLHLKNLVKLHMSKVTTNKQWKM 849

Query: 469  FESL-PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQL 526
            F+ L P    +S +LT L + +  + + LP    NL  L+ L I + T +  +P  +  L
Sbjct: 850  FQPLTPFMPMLSPTLTELYLFNIPSLVELPSSFRNLNKLRDLKISRCTNLETLPTGI-NL 908

Query: 527  SSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
             SLE L  +  + L   P   N  +++  L LS   +E +P  ++  S LK L++     
Sbjct: 909  KSLESLDFTKCSRLMTFP---NISTNISVLNLSYTAIEEVPWWVEIFSKLKNLNM---EC 962

Query: 586  DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNEL------SEIIKDGWMKQSVNGE 639
                EY+    + +P      RL+VD  +C  L+  +L      SE+I D     +V+ E
Sbjct: 963  CSKLEYVHPNISKLP------RLAVDFSHCEALNIADLSSRTSSSELITDASNSDTVSEE 1016

Query: 640  T----------YIT-----------------KSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            +          +I                  KSM F G  +P +F H +T S++++    
Sbjct: 1017 SSSDKFIPKVGFINYFKFNQDVLLQQLSVGFKSMTFLGEAVPSYFTHHTTESSLTIPLLD 1076

Query: 673  PTGYNKLMGFAFCVVVA 689
             +       F  C VV 
Sbjct: 1077 TSLTQTFFRFKVCAVVV 1093


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 194/385 (50%), Gaps = 27/385 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 389 EAQWNMEAFSKMSRLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPASLQVD 444

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ ++LK I+L  S  L+K P+L+   NLE L L  C+SL+
Sbjct: 445 ELVELHMANSSIEQLWYGCKSAINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLS 504

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+    KL+ ++L  CKS+  LP ++  + LK   L GCS L+  P +  + +   
Sbjct: 505 EVHPSLALHKKLQHVNLVNCKSIRILPNNLEMESLKVCTLDGCSKLEKFPDIIGNMNCLM 564

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    I +LPSSI  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+ +
Sbjct: 565 VLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCI 624

Query: 245 --------EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPSGQCMFKSLTSL 288
                    +   ++ GT  ++ P+S   LK         C R   +        SL  L
Sbjct: 625 PENLGKVESLEEFDVSGTLIRQLPASIFLLKNLEVLSMDGCKRI-VMLPSLSSLCSLEVL 683

Query: 289 EIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
            +  C   E  LP+++G+L +L  L +       LP+ + QL+ L  L L++C+ L  + 
Sbjct: 684 GLRACNLREGALPEDIGHLSSLRSLDLSQNKFVSLPKAINQLSELEMLVLEDCTMLASLP 743

Query: 348 SSIFKLKSVESIEISNCSNLKGFPE 372
               K   V+++ ++ C +LK  P+
Sbjct: 744 EVPSK---VQTVNLNGCRSLKKIPD 765



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 246/525 (46%), Gaps = 88/525 (16%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L+II+  N     + P+ L  +  L  LI++G T++ E+   L     L  + L 
Sbjct: 464 KSAINLKIINLSNSLNLSKTPN-LTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLV 522

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV- 390
           NC  +  + +++ +++S++   +  CS L+ FP+I           +D + I ++PSS+ 
Sbjct: 523 NCKSIRILPNNL-EMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIH 581

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                  L +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE  V G
Sbjct: 582 HLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDVSG 641

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
           T IR+                       LP+ +++ K+L  L +  CK  + +   + +L
Sbjct: 642 TLIRQ-----------------------LPASIFLLKNLEVLSMDGCKRIV-MLPSLSSL 677

Query: 504 EYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-N 560
             L+VL ++   +RE  +PE +G LSSL  L LS N    +P+++NQLS L  L L +  
Sbjct: 678 CSLEVLGLRACNLREGALPEDIGHLSSLRSLDLSQNKFVSLPKAINQLSELEMLVLEDCT 737

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP 620
            L  +PE    + ++        +L +IP+ ++   +S  SEF  L       NC +L  
Sbjct: 738 MLASLPEVPSKVQTVNLNGC--RSLKKIPDPIK-LSSSKRSEFLCL-------NCWELYK 787

Query: 621 NELSEIIKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK 678
           +   E +    +++ + G +       +  PGNEIP WF H+S GS+IS++ P       
Sbjct: 788 HNGRESMGSTMLERYLQGLSNPRPGFGIAVPGNEIPGWFNHRSKGSSISVQVPSGR---- 843

Query: 679 LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY-LGKISHVES 737
            MGF  CV                +D   +LF   C  ++ G ++Y S   +    H+ S
Sbjct: 844 -MGFFACVAFNA------------NDESPSLF---CHFKANGRENYPSPMCINFEGHLFS 887

Query: 738 DHVFLGSSIF-------AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
           DH++L    F         ++    + E  FH      +V  CG+
Sbjct: 888 DHIWLFYLSFDYLKELQEWQHESFSNIELSFHSYEQGVKVNNCGV 932


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 145/268 (54%), Gaps = 13/268 (4%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
            E Q N  +FSKM+ LRLLK     N  +    E +   +L++ EWH +PLK+L + L  +
Sbjct: 870  ESQWNMESFSKMSRLRLLKI---NNVQLSEGPEDIS-NKLQFLEWHSYPLKSLPVGLQVD 925

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
             LV L M  S + QLW   ++ V+LK I+L  S  L K PD +   NL+ L L  C+SL+
Sbjct: 926  QLVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDFTGIPNLKNLILEGCTSLS 985

Query: 126  ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
            E H S+ +  KL+ ++L  CKS+  LP ++    LK  +L GCS L+  P +  + +  +
Sbjct: 986  EVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCSKLEKFPDIVGNMNCLT 1045

Query: 185  TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
             L L G GI +L SS+  L  +G L + +CK LE+I SSI  L+ L+ + +  C  L++ 
Sbjct: 1046 VLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKY- 1104

Query: 245  EMPSCNIDGTRSKEQPSSELKLKKCPRP 272
                  I     K +   EL  +  PRP
Sbjct: 1105 ------IPEKLGKVESLEELDCRSNPRP 1126



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 33/210 (15%)

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
             SL +I  P+F  +P+       L  LI++G T++ E+   L     L  + L NC  + 
Sbjct: 957  NSLNLIKTPDFTGIPN-------LKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIR 1009

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV------- 390
             + +++ ++ S++   +  CS L+ FP+I           +DG+GI ++ SS+       
Sbjct: 1010 ILPNNL-EMGSLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLG 1068

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-----GT 444
             L +N C  LES+PSS+   KSL  L++  C +L+ +P++LG +E+LEEL        G 
Sbjct: 1069 LLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGKVESLEELDCRSNPRPGF 1128

Query: 445  GI----REVPKSLAQLALSKLKLKKCSSFE 470
            GI     E+P       L + K    S+ E
Sbjct: 1129 GIAVPGNEIPGWFNHQKLKEWKHGSFSNIE 1158



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 48/295 (16%)

Query: 282  FKSLTSLEIIDCPNFE--RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            F  ++ L ++   N +    P+++ N   L  L      ++ LP GL Q+  L +L + N
Sbjct: 878  FSKMSRLRLLKINNVQLSEGPEDISN--KLQFLEWHSYPLKSLPVGL-QVDQLVELHMAN 934

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
             S    I    +  KS  +++I N SN     + P    D +GI  + + +L+   C+ L
Sbjct: 935  SS----IEQLWYGYKSAVNLKIINLSNSLNLIKTP----DFTGIPNLKNLILE--GCTSL 984

Query: 400  ESLPSSLCMFKSLTSLEIIDCK-----------------------KLERLPDELGNLEAL 436
              +  SL   K L  + +++CK                       KLE+ PD +GN+  L
Sbjct: 985  SEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMGSLKVCILDGCSKLEKFPDIVGNMNCL 1044

Query: 437  EELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
              LR++GTGI ++  S+  L  L  L +  C + ES+PS +   KSL  L++  C     
Sbjct: 1045 TVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKY 1104

Query: 496  LPDEIGNLEYLKVLTIK-------GTAI--REVPESLGQLSSLEWLVLSDNNLQI 541
            +P+++G +E L+ L  +       G A+   E+P         EW   S +N+++
Sbjct: 1105 IPEKLGKVESLEELDCRSNPRPGFGIAVPGNEIPGWFNHQKLKEWKHGSFSNIEL 1159



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 17/206 (8%)

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
            LK+LP          L +    IE+L    K   N+         ++ N+S+S   L  +
Sbjct: 915  LKSLPVGLQVDQLVELHMANSSIEQLWYGYKSAVNL---------KIINLSNS---LNLI 962

Query: 231  ESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
            ++      PNL+ L +  C     +  + +  +    + L  C     LP+   M  SL 
Sbjct: 963  KTPDFTGIPNLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEM-GSLK 1021

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
               +  C   E+ PD +GN+  L  L +DGT I +L   +  L  L  L + NC  LE I
Sbjct: 1022 VCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESI 1081

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPE 372
             SSI  LKS++ +++S CS LK  PE
Sbjct: 1082 PSSIGCLKSLKKLDLSGCSELKYIPE 1107



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 110/258 (42%), Gaps = 63/258 (24%)

Query: 409  FKSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKL 463
            +KS  +L+II+      L + PD  G +  L+ L +EG T + EV  SLA    L  + L
Sbjct: 944  YKSAVNLKIINLSNSLNLIKTPDFTG-IPNLKNLILEGCTSLSEVHPSLAHHKKLQYMNL 1002

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              C S   LP+ L +  SL    +  C    + PD +GN+  L VL + GT I ++  S+
Sbjct: 1003 VNCKSIRILPNNLEMG-SLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSM 1061

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE- 582
              L  L   +LS NN +                    NLE IP  +  L SLK LDL   
Sbjct: 1062 HHLIGLG--LLSMNNCK--------------------NLESIPSSIGCLKSLKKLDLSGC 1099

Query: 583  NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            + L  IPE L         +  SL   +D R+    +P       + G+           
Sbjct: 1100 SELKYIPEKL--------GKVESLE-ELDCRS----NP-------RPGF----------- 1128

Query: 643  TKSMYFPGNEIPKWFRHQ 660
               +  PGNEIP WF HQ
Sbjct: 1129 --GIAVPGNEIPGWFNHQ 1144


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 22/289 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EW+ +P K+L      +
Sbjct: 473 EAQWNMKAFSKMSRLRLLKI---HNVQLSEGPEALS-NELRFLEWNSYPSKSLPACFQMD 528

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L K PDL+   NLE L L  C+SL+
Sbjct: 529 ELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLTGILNLESLILEGCTSLS 588

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  KL+ ++L +CKS+  LP ++  + LK   L GCS L+  P +  + +  +
Sbjct: 589 EVHPSLAHHKKLQYVNLVKCKSIRILPNNLEMESLKVCTLDGCSKLEKFPDIVGNMNCLT 648

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+++
Sbjct: 649 VLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYI 708

Query: 245 --------EMPSCNIDGTRSKEQPSSELKLKK--------CPRPESLPS 277
                    +   ++ GT  ++ P+S   LK         C R   LPS
Sbjct: 709 PENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPS 757



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 24/214 (11%)

Query: 282 FKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
           +KS  +L+II+  N     + PD  G L  L  LI++G T++ E+   L     L  + L
Sbjct: 547 YKSAVNLKIINLSNSLNLIKTPDLTGILN-LESLILEGCTSLSEVHPSLAHHKKLQYVNL 605

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGIERIPSS 389
             C  +  + +++ +++S++   +  CS L+ FP+I          C +D +GI ++ SS
Sbjct: 606 VKCKSIRILPNNL-EMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLC-LDETGITKLCSS 663

Query: 390 V--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           +        L +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE  V
Sbjct: 664 IHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDV 723

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            GT IR++P S+  L  L  L    C     LPS
Sbjct: 724 SGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPS 757



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 4/155 (2%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L KC  +  LP++L M +SL    +  C KLE+ PD +GN+  L  L ++ TGI ++ 
Sbjct: 603 VNLVKCKSIRILPNNLEM-ESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLC 661

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+  L  L  L +  C + ES+PS +   KSL  L++  C     +P+ +G +E L+  
Sbjct: 662 SSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEF 721

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
            + GT+IR++P S+  L +L+  VLS +  + I +
Sbjct: 722 DVSGTSIRQLPASIFLLKNLK--VLSSDGCERIAK 754



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 117/259 (45%), Gaps = 28/259 (10%)

Query: 409 FKSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKL 463
           +KS  +L+II+      L + PD  G L  LE L +EG T + EV  SLA    L  + L
Sbjct: 547 YKSAVNLKIINLSNSLNLIKTPDLTGILN-LESLILEGCTSLSEVHPSLAHHKKLQYVNL 605

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            KC S   LP+ L + +SL    +  C    + PD +GN+  L VL +  T I ++  S+
Sbjct: 606 VKCKSIRILPNNLEM-ESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSI 664

Query: 524 GQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLF 581
             L  L  L ++   NL+ IP S+  L SL  L LS  + L+ IPE L  + SL+  D+ 
Sbjct: 665 HHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVS 724

Query: 582 ENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY 641
             ++       R  P SI            L+N   L  +    I K        N    
Sbjct: 725 GTSI-------RQLPASI----------FLLKNLKVLSSDGCERIAKLPSYSGLSNPRPG 767

Query: 642 ITKSMYFPGNEIPKWFRHQ 660
               +  PGNEIP WF HQ
Sbjct: 768 F--GIAIPGNEIPGWFNHQ 784



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           + L KC     LP+   M +SL    +  C   E+ PD +GN+  L  L +D T I +L 
Sbjct: 603 VNLVKCKSIRILPNNLEM-ESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLC 661

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +  L  L  L + +C  LE I SSI  LKS++ +++S CS LK  PE          +
Sbjct: 662 SSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPE---------NL 712

Query: 384 ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
            ++ S        + +  LP+S+ + K+L  L    C+++ +LP   G
Sbjct: 713 GKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPSYSG 760


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1177

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 204/430 (47%), Gaps = 50/430 (11%)

Query: 4   INSEIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKT 58
           I   I I+   F +M  L+ L+F    G +   +++  +G+     +LR   W ++PL  
Sbjct: 567 IEGVINISERAFERMCNLQFLRFHHPYGDRCHDILYLPQGLSNISRKLRLLHWERYPLTC 626

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +  + E LV + M  S + +LW+  + + +LK +DL +   L +LPD S A NL+ L 
Sbjct: 627 LPSKFNPEFLVKINMRDSMLEKLWEGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELR 686

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
           L  C SL E  SSI  +  L  LDL  C SL  LP+SI +   LK+L L  CS+L     
Sbjct: 687 LVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLV---- 742

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
                             +LPSSI  ++++ EL +  C  L  I SSI     L+ +   
Sbjct: 743 ------------------QLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKLYAD 784

Query: 237 RCPNLQFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            C +L  +E+PS   NI   R       EL+L  C      PS       L  L +  C 
Sbjct: 785 GCSSL--VELPSSVGNIANLR-------ELQLMNCSSLIEFPSSILKLTRLKDLNLSGCS 835

Query: 295 NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           +  +LP  +GN+  L  L + G +++ ELP  +     L  L L  CS+L  + SSI+ +
Sbjct: 836 SLVKLP-SIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDLLELPSSIWNI 894

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            +++S+ ++ CS+LK  P +      G+ I       L L  CS +  LPSS+    +L+
Sbjct: 895 TNLQSLYLNGCSSLKELPSLV-----GNAINL---QSLSLMNCSSMVELPSSIWNATNLS 946

Query: 414 SLEIIDCKKL 423
            L++  C  L
Sbjct: 947 YLDVSSCSSL 956



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 200/452 (44%), Gaps = 77/452 (17%)

Query: 240  NLQFLEMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            NL+++++  C       KE P         EL+L  C     LPS      +L  L++I 
Sbjct: 658  NLKWMDLSFC----VNLKELPDFSTATNLQELRLVDCLSLVELPSSIGNVTNLLELDLIG 713

Query: 293  CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C +  +LP  +GNL  L +L ++  +++ +LP  +G +  L +L L  CS L  I SSI 
Sbjct: 714  CSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLPSSIGNVTSLKELNLSGCSSLLEIPSSIG 773

Query: 352  KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFK 410
               +++ +    CS+L   P         S +  I +   L+L  CS L   PSS+    
Sbjct: 774  NTTNLKKLYADGCSSLVELP---------SSVGNIANLRELQLMNCSSLIEFPSSILKLT 824

Query: 411  SLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSS 468
             L  L +  C  L +LP  +GN+  L+ L + G + + E+P S+     L  L L  CS 
Sbjct: 825  RLKDLNLSGCSSLVKLP-SIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSD 883

Query: 469  FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLS 527
               LPS ++   +L SL +  C +   LP  +GN   L+ L++   +++ E+P S+   +
Sbjct: 884  LLELPSSIWNITNLQSLYLNGCSSLKELPSLVGNAINLQSLSLMNCSSMVELPSSIWNAT 943

Query: 528  SLEWLVLSDNNLQI---IPESLNQLSSLVS-------LKLSNNNLERIPERLDPLSSLKY 577
            +L +L +S  +  +   I   LNQ   LVS       L L   + E + ERLD       
Sbjct: 944  NLSYLDVSSCSSLVGLNIKLELNQCRKLVSHPVVPDSLILDAGDCESLVERLD------- 996

Query: 578  LDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVN 637
                                     F + ++ ++  NC KL+      II          
Sbjct: 997  -----------------------CSFQNPKIVLNFANCFKLNQEARDLII---------- 1023

Query: 638  GETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
             +T   ++   PG ++P +F +++TG ++++K
Sbjct: 1024 -QTSTCRNAILPGGKVPAYFTYRATGDSLTVK 1054



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 7/200 (3%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR-VEGT 444
           P  ++K+N + S LE L       ++L  +++  C  L+ LPD       L+ELR V+  
Sbjct: 633 PEFLVKINMRDSMLEKLWEGNEPIRNLKWMDLSFCVNLKELPD-FSTATNLQELRLVDCL 691

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + E+P S+  +  L +L L  CSS   LPS +    +L  L +  C + ++LP  IGN+
Sbjct: 692 SLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLPSSIGNV 751

Query: 504 EYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-N 560
             LK L + G +++ E+P S+G  ++L+ L     ++L  +P S+  +++L  L+L N +
Sbjct: 752 TSLKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANLRELQLMNCS 811

Query: 561 NLERIPERLDPLSSLKYLDL 580
           +L   P  +  L+ LK L+L
Sbjct: 812 SLIEFPSSILKLTRLKDLNL 831


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 259/556 (46%), Gaps = 98/556 (17%)

Query: 283  KSLTSLEIIDCPNFERLPDELGNLQA--LNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
            K+   L  +D    + L +  G L+A  L RL ++          + Q+  L  L L++C
Sbjct: 633  KNTGELRWVDLSYSKELMNLTGLLEARKLERLNLENCTSLTKCSAIRQMDSLVSLNLRDC 692

Query: 341  SELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPSS------- 389
              L+ +   I  LKS++ + +S CS LK FP     I    +DG+ ++R+P S       
Sbjct: 693  INLKSLPKRI-SLKSLKFVILSGCSKLKKFPTISENIESLYLDGTAVKRVPESIENLQKL 751

Query: 390  -VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
             VL L KCS+L  LP++LC  KSL  L +  C KLE  PD   ++E+LE L ++ T I++
Sbjct: 752  TVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDINEDMESLEILLMDDTAIKQ 811

Query: 449  VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
             P+   ++ +S LKL     F    S+++    LT LE++      RL D          
Sbjct: 812  TPR---KMDMSNLKL-----FSFGGSKVH---DLTCLELLPFSGCSRLSD---------- 850

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
            + +    + ++P+S   LS L+ L LS NN++ +P S+ +L  L SL L +   L  +P 
Sbjct: 851  MYLTDCNLYKLPDSFSCLSLLQTLCLSRNNIKNLPGSIKKLHHLKSLYLKHCQQLVSLP- 909

Query: 568  RLDPLSSLKYLDLFEN-NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
             + P S+L+YLD     +L+ + + +     +  ++ T +       +C KL+ +    I
Sbjct: 910  -VLP-SNLQYLDAHGCISLETVAKPMTLLVVAERNQSTFV-----FTDCFKLNRDAQESI 962

Query: 627  IKDGWMKQSVNGETYITK-----------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
            +    +K  + G   + +           S  FPGN++P WFRHQ  GS++    P    
Sbjct: 963  VAHTQLKSQILGNGSLQRNHKGLVSEPLASASFPGNDLPLWFRHQRMGSSMETHLPPHWC 1022

Query: 676  YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV--CDRRSEGYD--SYTSSYLG- 730
             +K +G + CVVV+         + V+   K N F V+  C  R+E  D  S+T +  G 
Sbjct: 1023 DDKFIGLSLCVVVSFK-------DYVD---KTNRFSVICKCKFRNEDGDCISFTCNLGGW 1072

Query: 731  ------------KISHVESDHVFLG-SSIFAGENS------CKRSDEF-FFHIDR----- 765
                        +   + SDHVF+  ++ F  + S      C  +  F FF  D      
Sbjct: 1073 KEQCGSSSSREEEPRKLTSDHVFISYNNCFHAKKSHDLNRCCNTTASFKFFVTDGVSKRK 1132

Query: 766  -SCCEVKKCGIHFVHA 780
              CCEV KCG+  ++A
Sbjct: 1133 LDCCEVVKCGMSLLYA 1148



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 185/372 (49%), Gaps = 36/372 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS------KNKCMVHSLEGVPF--TELRYFEWH 52
           MS ++S ++++   F++M  L+ LKF  S      +N C +   +G+     EL Y  W 
Sbjct: 541 MSNVDS-MKLSADIFARMWNLKFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQ 599

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            +PL+ L +  + + LV L +  S + QL +D +N   L+ +DL YSK L  L  L  A+
Sbjct: 600 GYPLEYLPSNFNPKKLVYLNLRYSNIMQLCEDEKNTGELRWVDLSYSKELMNLTGLLEAR 659

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
            LE L+L  C+SLT+  S+I+ ++ L  L+L  C +L SLP  I  K LK ++L GCS L
Sbjct: 660 KLERLNLENCTSLTKC-SAIRQMDSLVSLNLRDCINLKSLPKRISLKSLKFVILSGCSKL 718

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K  P ++  ++ S L L G  ++ +P SI+ L  +  L +  C RL ++ +++ KL+ L+
Sbjct: 719 KKFPTISE-NIES-LYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLK 776

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS------GQCMFKSL 285
            + +  C  L+    P  N D    +     +  +K+ PR   + +      G      L
Sbjct: 777 ELLLSGCSKLE--SFPDINEDMESLEILLMDDTAIKQTPRKMDMSNLKLFSFGGSKVHDL 834

Query: 286 TSLEII--------------DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
           T LE++              DC N  +LPD    L  L  L +    I+ LP  + +L  
Sbjct: 835 TCLELLPFSGCSRLSDMYLTDC-NLYKLPDSFSCLSLLQTLCLSRNNIKNLPGSIKKLHH 893

Query: 332 LSKLELKNCSEL 343
           L  L LK+C +L
Sbjct: 894 LKSLYLKHCQQL 905



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 27/230 (11%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   +SLP  +   KSL  + +  C   ++ P    N+++L    +DGTA++ +P
Sbjct: 687 LNLRDCINLKSLPK-RISLKSLKFVILSGCSKLKKFPTISENIESL---YLDGTAVKRVP 742

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFC 376
           E +  L  L+ L LK CS L ++ +++ KLKS++ + +S CS L+ FP+I          
Sbjct: 743 ESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDINEDMESLEIL 802

Query: 377 NIDGSGIERIPSSV------------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
            +D + I++ P  +             K++  + LE LP S C    L+ + + DC  L 
Sbjct: 803 LMDDTAIKQTPRKMDMSNLKLFSFGGSKVHDLTCLELLPFSGC--SRLSDMYLTDC-NLY 859

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
           +LPD    L  L+ L +    I+ +P S+ +L  L  L LK C    SLP
Sbjct: 860 KLPDSFSCLSLLQTLCLSRNNIKNLPGSIKKLHHLKSLYLKHCQQLVSLP 909



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 30/210 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           EN+ SL + G+ V ++ + ++NL  L  ++LK    L  LP            L    S 
Sbjct: 726 ENIESLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSK 785

Query: 125 TETHSSI-QYLNKLEVL--------------DLDRCKSLTSLPTSIHS-KYLKRLVLRGC 168
            E+   I + +  LE+L              D+   K  +   + +H    L+ L   GC
Sbjct: 786 LESFPDINEDMESLEILLMDDTAIKQTPRKMDMSNLKLFSFGGSKVHDLTCLELLPFSGC 845

Query: 169 S----------NLKNLPKMTSC-HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
           S          NL  LP   SC  L  TL L    I+ LP SIK L ++  L +  C++L
Sbjct: 846 SRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRNNIKNLPGSIKKLHHLKSLYLKHCQQL 905

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
            ++      LQ+L++   H C +L+ +  P
Sbjct: 906 VSLPVLPSNLQYLDA---HGCISLETVAKP 932


>gi|21655195|gb|AAM28912.1| NBS/LRR [Pinus taeda]
          Length = 363

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 164/332 (49%), Gaps = 25/332 (7%)

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP 270
           + +C+ LE +  +   L   + I + RC  L+ L     N+   +        + +++C 
Sbjct: 37  VXACEELEQLPDAFGNLANXQHINMSRCWXLKQLPDDLGNLANMQX-------IDMRQCW 89

Query: 271 RPESLPSGQCMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGL 326
             + LP    +F +L +L+ I    C   E+LPD  GNL  L  + +     +++LP+G 
Sbjct: 90  GLKQLPD---VFGNLANLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPDGF 146

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
           G LA L  + + +C  L+ +      L +++ I++S+CS LK  P+  F N+  + ++ I
Sbjct: 147 GNLANLQHIHMSHCWALKQLPDGFGNLANLQHIDMSDCSELKKLPD-DFGNL--ANLQHI 203

Query: 387 PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TG 445
                 ++ C +LE L +      +L  +++ DC  L++LPD  GNL  L+ + +   +G
Sbjct: 204 -----NMSGCWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSG 258

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           ++++P     LA L  + + KC   E LP       +L  + +  C    +LPD  GNL 
Sbjct: 259 LKQLPDGFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLA 318

Query: 505 YLKVLTIKGT-AIREVPESLGQLSSLEWLVLS 535
            L+ + +     ++++P+  G L++L+ + +S
Sbjct: 319 NLQHINMSHCPGLKQLPDGFGNLANLQHIDMS 350



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 161/332 (48%), Gaps = 14/332 (4%)

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
           R     ++   +  C   E LP       +   + +  C   ++LPD+LGNL  +  + +
Sbjct: 26  RQSSTSATHXHVXACEELEQLPDAFGNLANXQHINMSRCWXLKQLPDDLGNLANMQXIDM 85

Query: 315 -DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
                +++LP+  G LA L  + +  C  LE +      L +++ I +S C  LK  P+ 
Sbjct: 86  RQCWGLKQLPDVFGNLANLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPD- 144

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
            F N+  + ++ I      ++ C  L+ LP       +L  +++ DC +L++LPD+ GNL
Sbjct: 145 GFGNL--ANLQHI-----HMSHCWALKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNL 197

Query: 434 EALEELRVEGTG-IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
             L+ + + G   + ++      LA L  + +  C   + LP       +L  + +  C 
Sbjct: 198 ANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCS 257

Query: 492 NFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQL 549
              +LPD  GNL  L+ + + K   + ++P+  G L++L+ + +S    L+ +P+    L
Sbjct: 258 GLKQLPDGFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNL 317

Query: 550 SSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           ++L  + +S+   L+++P+    L++L+++D+
Sbjct: 318 ANLQHINMSHCPGLKQLPDGFGNLANLQHIDM 349



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 150/324 (46%), Gaps = 30/324 (9%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC-------------P 239
           +E+LP +   L+N   + +  C  L+ +   +  L  ++ I + +C              
Sbjct: 43  LEQLPDAFGNLANXQHINMSRCWXLKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFGNLA 102

Query: 240 NLQFLEMPSCNI-----DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           NLQ + M  C       DG  +       + + +C R + LP G     +L  + +  C 
Sbjct: 103 NLQHIXMSGCXGLEQLPDGFGNLAN-LQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCW 161

Query: 295 NFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
             ++LPD  GNL  L  + + D + +++LP+  G LA L  + +  C  LE +++    L
Sbjct: 162 ALKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNL 221

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            +++ I++S+C  LK  P+  F N+  + ++ I      ++ CS L+ LP       +L 
Sbjct: 222 ANLQHIDMSDCWGLKQLPD-GFGNL--ANLQHI-----HMSHCSGLKQLPDGFGNLANLQ 273

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLA-LSKLKLKKCSSFES 471
            +++  C+ LE+LPD  GNL  L+ + +    G++++P     LA L  + +  C   + 
Sbjct: 274 HIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHINMSHCPGLKQ 333

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMR 495
           LP       +L  +++  C  F+R
Sbjct: 334 LPDGFGNLANLQHIDMSGCSGFLR 357



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 47/341 (13%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C  L +   +   L   + +++ RC  L  LP                 +L NL  M   
Sbjct: 40  CEELEQLPDAFGNLANXQHINMSRCWXLKQLP----------------DDLGNLANMQXI 83

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            +R        G+++LP     L+N+  + +  C  LE +      L  L+ I + RC  
Sbjct: 84  DMRQCW-----GLKQLPDVFGNLANLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWR 138

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L+ L     N+   +        + +  C   + LP G     +L  +++ DC   ++LP
Sbjct: 139 LKQLPDGFGNLANLQ-------HIHMSHCWALKQLPDGFGNLANLQHIDMSDCSELKKLP 191

Query: 301 DELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           D+ GNL  L  + + G   + +L  G G LA L  +++ +C  L+ +      L +++ I
Sbjct: 192 DDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGFGNLANLQHI 251

Query: 360 EISNCSNLKGFPEIPFCN------IDGS---GIERIPSSV--------LKLNKCSKLESL 402
            +S+CS LK  P+  F N      ID S   G+E++P           + ++ C  L+ L
Sbjct: 252 HMSHCSGLKQLPD-GFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQL 310

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
           P       +L  + +  C  L++LPD  GNL  L+ + + G
Sbjct: 311 PDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHIDMSG 351



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 40/310 (12%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL--SLAQNLEILDLGYCSSLTETHSSIQYL 134
           + QL DD+ NL +++ ID++    L +LPD+  +LA NL+ + +  C  L +       L
Sbjct: 67  LKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFGNLA-NLQHIXMSGCXGLEQLPDGFGNL 125

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK------------MTSCH 181
             L+ + + RC  L  LP    +   L+ + +  C  LK LP             M+ C 
Sbjct: 126 ANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWALKQLPDGFGNLANLQHIDMSDC- 184

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                      +++LP     L+N+  + +  C RLE +++    L  L+ I +  C  L
Sbjct: 185 ---------SELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDCWGL 235

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFER 298
           + L     N+   +        + +  C   + LP G   F +L +L+ ID   C   E+
Sbjct: 236 KQLPDGFGNLANLQ-------HIHMSHCSGLKQLPDG---FGNLANLQHIDMSKCRGLEQ 285

Query: 299 LPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           LPD  GNL  L  + +     +++LP+G G LA L  + + +C  L+ +      L +++
Sbjct: 286 LPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQ 345

Query: 358 SIEISNCSNL 367
            I++S CS  
Sbjct: 346 HIDMSGCSGF 355



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 32/266 (12%)

Query: 66  NLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSS 123
           NL  + M G   + QL D   NL +L+ I +     L +LPD      NL+ + + +C +
Sbjct: 103 NLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWA 162

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGC----------SNLK 172
           L +       L  L+ +D+  C  L  LP    +   L+ + + GC           NL 
Sbjct: 163 LKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLA 222

Query: 173 NLPK--MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           NL    M+ C           G+++LP     L+N+  + +  C  L+ +      L  L
Sbjct: 223 NLQHIDMSDC----------WGLKQLPDGFGNLANLQHIHMSHCSGLKQLPDGFGNLANL 272

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           + I + +C  L+ L     N+   +        + +  CP  + LP G     +L  + +
Sbjct: 273 QHIDMSKCRGLEQLPDGFGNLANLQ-------HINMSHCPGLKQLPDGFGNLANLQHINM 325

Query: 291 IDCPNFERLPDELGNLQALNRLIIDG 316
             CP  ++LPD  GNL  L  + + G
Sbjct: 326 SHCPGLKQLPDGFGNLANLQHIDMSG 351



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 35/226 (15%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           + QL D   NL +L+ ID+     L KLPD      NL+ +++  C  L +  +    L 
Sbjct: 163 LKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLA 222

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
            L+ +D+  C  L  LP              G  NL NL  +   H          G+++
Sbjct: 223 NLQHIDMSDCWGLKQLPD-------------GFGNLANLQHIHMSHCS--------GLKQ 261

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP     L+N+  + +  C+ LE +      L  L+ I +  CP L+ L     N+   +
Sbjct: 262 LPDGFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQ 321

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFER 298
                   + +  CP  + LP G   F +L +L+ ID   C  F R
Sbjct: 322 -------HINMSHCPGLKQLPDG---FGNLANLQHIDMSGCSGFLR 357


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 254/554 (45%), Gaps = 75/554 (13%)

Query: 101 LTKLPD-LSLAQNLEILDLG----------------------YCSSLTETHSSIQYLNKL 137
           + +LPD ++  QNLEIL+L                        C +  +   SI  +  L
Sbjct: 429 IKRLPDTITELQNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASL 488

Query: 138 EVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL----KNLPKMTSCHLRSTLPLLGVG 192
            +L    C++L+SLP+ +   K LK LVL  C +L    +N+  + S  +   L +  + 
Sbjct: 489 RILSCKSCRNLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRV---LRVRNIR 545

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR---IHRCPN-------LQ 242
           + ELPSS + L+N+  +L  +   L  +  S+  + +   I+   +  C +       L 
Sbjct: 546 LTELPSSFENLTNL-RVLDLASNELSVLPDSLGNVVYSRDIKNNNVIECKSGLVSLRTLN 604

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
               P  +I       +    L L       SLP       +L  L+I D  N ++LP++
Sbjct: 605 LYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDA-NIQQLPED 663

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF---KLKSVESI 359
            G LQ+L +L I    + + PE    +A L +LE++N        +++F    L ++E +
Sbjct: 664 FGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTK-----VATLFGFENLVNLEFL 718

Query: 360 EISNCSNLKGFPEIPFCN--------IDGSGIERIPSSVLKLNKCS-------KLESLPS 404
            +S   NL+  PE  F N        I  S I  +P ++  L   +       K+  LP 
Sbjct: 719 RLSGNKNLETLPE-NFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPG 777

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
           S    +SL  L + DC K+  LPD  G L+ L  LR+    I  +P +  +L      L 
Sbjct: 778 SFGELESLMEL-VADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLT----NLS 832

Query: 465 KCSSFESLPSRLYVS-KSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           +C    ++ +RL  S  +L SL ++  K      LPD   +L  L+ L +    ++++PE
Sbjct: 833 ECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPE 892

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            +G L +L    L+ N+L+IIP+S+ +L  L  L ++NN ++R+P  +  L  L  L+L 
Sbjct: 893 KIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKRLPYCMGNLRKLMELNLN 952

Query: 582 ENNLDRIPEYLRSF 595
            N LD +P+ +++ 
Sbjct: 953 SNKLDNLPDSMKNL 966



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 270/590 (45%), Gaps = 75/590 (12%)

Query: 61  ILHWE-NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           ++H++ NL  L +  +K+TQ+   +  LV+LK ++L+ +K+          + L++L L 
Sbjct: 272 LIHFQKNLTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLS 331

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
               L    S I  L  L++L    CK + S+P  I     L+ L+L G + +  LPK  
Sbjct: 332 LNQQLGHFPSQILNLKSLKILLASFCK-IESIPREISELTNLEVLILNG-NKIPALPKSI 389

Query: 179 SCHLRSTLPLLGVG---------------------------IEELPSSIKCLSNIGELLI 211
             HL + L +LG+G                           I+ LP +I  L N+ E+L 
Sbjct: 390 K-HL-AKLRILGLGRFGPENISDCEEYSRNESKKISDDRNRIKRLPDTITELQNL-EILN 446

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
                +E +  +I +LQ ++ + I  C N + L    C I   R        L  K C  
Sbjct: 447 LDGVEIEILPENIGRLQKMKKL-ILNCGNFKQLPESICQIASLRI-------LSCKSCRN 498

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
             SLPSG  + K+L  L +  C +   L   +G++++L  L +    + ELP     L  
Sbjct: 499 LSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTN 558

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK-GFPEIPFCNIDGSGIERIPSSV 390
           L  L+L + +EL  +  S+  +     I+ +N    K G   +   N+  + I  I  +V
Sbjct: 559 LRVLDLAS-NELSVLPDSLGNVVYSRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADNV 617

Query: 391 --------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                   L L     L SLP +     +L  L+I D   +++LP++ G L++LE+L+++
Sbjct: 618 GNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDA-NIQQLPEDFGKLQSLEQLQIK 676

Query: 443 GTGIREVPKS------LAQLALSKLKLKKCSSFESLPS----RLYVSKSLTSLE------ 486
              + + P+S      L +L +   K+     FE+L +    RL  +K+L +L       
Sbjct: 677 SVKLEKFPESCKNMANLKRLEVRNTKVATLFGFENLVNLEFLRLSGNKNLETLPENFDNL 736

Query: 487 ------IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
                 +I       LP+ IGNL+ L +L ++   I  +P S G+L SL  LV   N + 
Sbjct: 737 INLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIP 796

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           ++P+S  +L +L  L+L++N +  +P+    L++L    +  N L R+PE
Sbjct: 797 LLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRLPE 846



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 51/298 (17%)

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP- 374
           G ++  LP G+ +   L  L L + ++L  +  SI +L  ++ + +  C+ L+  PE P 
Sbjct: 29  GLSLHSLPIGILKFKNLIVLSL-SSNQLNKLPKSIAELSHLKCLNLQ-CNMLEAVPEFPP 86

Query: 375 ---FCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLE 424
                N++ + I+ IP S+  L    KL       + LP S+    +L  L +    +L 
Sbjct: 87  SIRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSM-QGNQLI 145

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            LPD L  L  L  L V    I+E+P+   +LA    +    +  +S+ S          
Sbjct: 146 ELPD-LSGLPDLRHLDVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCS---------- 194

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
                            +L YLK L + G  I+ +P  +G L+S+E L L  NN+  +P 
Sbjct: 195 ----------------PSLSYLKKLDLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPR 238

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY----------LDLFENNLDRIPEYL 592
           S+  L +L  L L +N + ++P RL   +   Y          LDL  N + +IP+Y+
Sbjct: 239 SIFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLIHFQKNLTVLDLSNNKITQIPKYI 296



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 171/394 (43%), Gaps = 103/394 (26%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           + C   E +P+   +++ LN   ++   I+ +P+ +  L  + KL L N + ++++  SI
Sbjct: 73  LQCNMLEAVPEFPPSIRTLN---LNKNLIKAIPKSIFNLKSIEKLYLNN-NLIDFLPDSI 128

Query: 351 -----FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIP-------SSVLKLNKCSK 398
                 KL S++  ++    +L G P++   ++  + I+ +P       +   + N  +K
Sbjct: 129 AELSTLKLLSMQGNQLIELPDLSGLPDLRHLDVAFNRIKELPRLSPKLATLTARFNSIAK 188

Query: 399 LESLPS-SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
           ++S+ S SL   K L  L      +++ +P E+GNL ++E L ++   I EVP+S+  L 
Sbjct: 189 IDSMCSPSLSYLKKLDLL----GNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFSLK 244

Query: 458 -LSKLKLKKCSSFESLPSRL----------YVSKSLTSLEIIDCK--------------- 491
            L +L L   +    LP+RL          +  K+LT L++ + K               
Sbjct: 245 NLKQLHLG-SNKISKLPARLTGKAKKSYLIHFQKNLTVLDLSNNKITQIPKYITELVNLK 303

Query: 492 --------------NFMRL-----------------PDEIGNLEYLKVLTIKGTAIREVP 520
                         +F ++                 P +I NL+ LK+L      I  +P
Sbjct: 304 VLNLRSNKIALLRGSFKKMKGLKVLKLSLNQQLGHFPSQILNLKSLKILLASFCKIESIP 363

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS---------------------- 558
             + +L++LE L+L+ N +  +P+S+  L+ L  L L                       
Sbjct: 364 REISELTNLEVLILNGNKIPALPKSIKHLAKLRILGLGRFGPENISDCEEYSRNESKKIS 423

Query: 559 --NNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
              N ++R+P+ +  L +L+ L+L    ++ +PE
Sbjct: 424 DDRNRIKRLPDTITELQNLEILNLDGVEIEILPE 457


>gi|296089531|emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 133/241 (55%), Gaps = 9/241 (3%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+  +   F+KM  LRLLK C   N  +  SL  +   E  Y  WH +PLK+  +  H E
Sbjct: 443 ELNFSIDAFTKMKRLRLLKIC---NVQIDRSLGYLSKKEDLY--WHGYPLKSFPSNFHPE 497

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S++ Q W+  +    LK I L +S+ LTK+PD S   NL  L L  C+SL 
Sbjct: 498 KLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSGVPNLRRLILKGCTSLV 557

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST 185
           E H SI  L KL  L+L+ CK L S  +SIH + L+ L L GCS LK  P++   ++ S 
Sbjct: 558 EVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKKFPEIQE-NMESL 616

Query: 186 LPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           + L   G GI ELPSSI CL+ +  L + +CK+L ++  S  +L  L ++ +  C  L+ 
Sbjct: 617 MELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKD 676

Query: 244 L 244
           L
Sbjct: 677 L 677



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 19/202 (9%)

Query: 259 QPSSELKLKKC-PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG- 316
            P   ++L  C  R +    G+  F+ L S+++    +  ++PD  G +  L RLI+ G 
Sbjct: 495 HPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSG-VPNLRRLILKGC 553

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF- 375
           T++ E+   +G L  L  L L+ C +L+  SSSI  ++S++ + +S CS LK FPEI   
Sbjct: 554 TSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEIQEN 612

Query: 376 ------CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
                   +DGSGI  +PSS+        L L  C KL SLP S C   SL +L +  C 
Sbjct: 613 MESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCS 672

Query: 422 KLERLPDELGNLEALEELRVEG 443
           +L+ LPD LG+L+ L EL  +G
Sbjct: 673 ELKDLPDNLGSLQCLTELNADG 694



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 2/124 (1%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L  C KL+S  SS+ M +SL  L +  C KL++ P+   N+E+L EL ++G+GI E+P
Sbjct: 572 LNLEGCKKLKSFSSSIHM-ESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELP 630

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+  L  L  L LK C    SLP       SL +L +  C     LPD +G+L+ L  L
Sbjct: 631 SSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTEL 690

Query: 510 TIKG 513
              G
Sbjct: 691 NADG 694



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 7/198 (3%)

Query: 387 PSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++LN C S+L+        F+ L S+++   + L ++PD  G +  L  L ++G T
Sbjct: 496 PEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSG-VPNLRRLILKGCT 554

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + EV  S+  L  L  L L+ C   +S  S +++ +SL  L +  C    + P+   N+
Sbjct: 555 SLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHM-ESLQILTLSGCSKLKKFPEIQENM 613

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NN 561
           E L  L + G+ I E+P S+G L+ L +L L +   L  +P+S  +L+SL +L L   + 
Sbjct: 614 ESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSE 673

Query: 562 LERIPERLDPLSSLKYLD 579
           L+ +P+ L  L  L  L+
Sbjct: 674 LKDLPDNLGSLQCLTELN 691


>gi|399920226|gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
          Length = 2242

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 61/384 (15%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
            E + NP  FSKM  L+LL          +H+L    G  F    LR  +W  +P K+L  
Sbjct: 1699 EAEWNPKAFSKMCNLKLL---------YIHNLRLSLGPKFLPDALRILKWSGYPSKSLPP 1749

Query: 62   -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                + L  L +  S +  LW+ +++LV+LK IDL YS+ L + P+ +   NL  L L  
Sbjct: 1750 DFQPDELTKLSLVHSNIDHLWNGIKSLVNLKSIDLSYSRSLRRTPNFTGIPNLGKLVLEG 1809

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            C++L E H SI  L +L++ +   CKS+ SLP++++ ++L+   + GCS LK +P+    
Sbjct: 1810 CTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSAVNMEFLETFDVSGCSKLKKIPEFVGQ 1869

Query: 181  HLR-STLPLLGVGIEELPSSIKCLS-NIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
              R S L L G  +E+LPSSI+ LS ++ EL +    + +      F L   +++R+   
Sbjct: 1870 TKRLSKLYLDGTAVEKLPSSIEHLSESLVELDLSGIVKRDQ----PFSLFVKQNLRVS-- 1923

Query: 239  PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM--FKSLTSLEIIDCPNF 296
                                  S  L  +K P P  +P    +  F SLT L + DC   
Sbjct: 1924 ----------------------SFGLFPRKSPHP-LIPVLASLKHFSSLTKLNLNDCNLC 1960

Query: 297  E-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY-----ISSSI 350
            E  +P+++G L +L  L + G     LP  +  L+ L++++++NC  L+      +S S+
Sbjct: 1961 EGEIPNDIGTLSSLEILKLRGNNFVSLPASIHLLSKLTQIDVENCKRLQQLPELPVSRSL 2020

Query: 351  FKLKSVESIEISNCSNLKGFPEIP 374
            +       +   NC++L+ FP+ P
Sbjct: 2021 W-------VTTDNCTSLQVFPDPP 2037



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 239/523 (45%), Gaps = 75/523 (14%)

Query: 294  PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
            P F  LPD      AL  L   G   + LP    Q   L+KL L + S ++++ + I  L
Sbjct: 1727 PKF--LPD------ALRILKWSGYPSKSLPPDF-QPDELTKLSLVH-SNIDHLWNGIKSL 1776

Query: 354  KSVESIEIS------NCSNLKGFPEIPFCNIDGSG--IERIPS-------SVLKLNKCSK 398
             +++SI++S         N  G P +    ++G    +E  PS        +     C  
Sbjct: 1777 VNLKSIDLSYSRSLRRTPNFTGIPNLGKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCKS 1836

Query: 399  LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
            ++SLPS++ M + L + ++  C KL+++P+ +G  + L +L ++GT + ++P S+  L+ 
Sbjct: 1837 IKSLPSAVNM-EFLETFDVSGCSKLKKIPEFVGQTKRLSKLYLDGTAVEKLPSSIEHLSE 1895

Query: 459  SKLKLKKCSSFE-SLPSRLYVSKSL--TSLEIIDCKNFMRLPDEIGNLEYLKVLT----- 510
            S ++L      +   P  L+V ++L  +S  +   K+   L   + +L++   LT     
Sbjct: 1896 SLVELDLSGIVKRDQPFSLFVKQNLRVSSFGLFPRKSPHPLIPVLASLKHFSSLTKLNLN 1955

Query: 511  ----IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
                 +G    E+P  +G LSSLE L L  NN   +P S++ LS L  + + N   L+++
Sbjct: 1956 DCNLCEG----EIPNDIGTLSSLEILKLRGNNFVSLPASIHLLSKLTQIDVENCKRLQQL 2011

Query: 566  PERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLRNCLKLDPNELS 624
            PE    L   + L +  +N       L+ FP   P +   L    V   NC  +  N+ +
Sbjct: 2012 PE----LPVSRSLWVTTDNCTS----LQVFPD--PPDLCRLSAFWVSCVNCSSMVGNQDA 2061

Query: 625  EIIKDGWMKQSVNGETYITKSMYF---PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
                   +K+ +  ET  +   Y    PG+EIP+WF +QS G  ++ K P     +K +G
Sbjct: 2062 SYFLYSVLKRLLE-ETLCSFRYYLFLVPGSEIPEWFNNQSVGDRVTEKLPSDACNSKWIG 2120

Query: 682  FAFCVVVACSVSECCRHES-VEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
            FA C ++    +     E+ + D   C    + C   + G+ S    +  ++    SDH+
Sbjct: 2121 FAVCALIVPQDNPSAFPENPLLDPDTCR---IGC-HWNNGFYSLGQKF--RVRQFVSDHL 2174

Query: 741  F---LGSSIFAGENSCKRSDEFFFHIDRS-----CCEVKKCGI 775
            +   L S  +  E   + +  F F + R+     C +VKKCG+
Sbjct: 2175 WLFVLRSHFWKLEKRLEVN--FVFEVTRAVGSNICIKVKKCGV 2215



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 36/237 (15%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
             + C   +SLPS   M + L + ++  C   +++P+ +G  + L++L +DGTA+ +LP  
Sbjct: 1831 FRNCKSIKSLPSAVNM-EFLETFDVSGCSKLKKIPEFVGQTKRLSKLYLDGTAVEKLP-- 1887

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF--PEIPFCNIDGSGI 383
                           S +E++S S+ +L            +L G    + PF       +
Sbjct: 1888 ---------------SSIEHLSESLVEL------------DLSGIVKRDQPFSLFVKQNL 1920

Query: 384  ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVE 442
                  +        L  + +SL  F SLT L + DC   E  +P+++G L +LE L++ 
Sbjct: 1921 RVSSFGLFPRKSPHPLIPVLASLKHFSSLTKLNLNDCNLCEGEIPNDIGTLSSLEILKLR 1980

Query: 443  GTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            G     +P S+  L+ L+++ ++ C   + LP  L VS+SL  +   +C +    PD
Sbjct: 1981 GNNFVSLPASIHLLSKLTQIDVENCKRLQQLPE-LPVSRSLW-VTTDNCTSLQVFPD 2035


>gi|357513933|ref|XP_003627255.1| NBS resistance protein [Medicago truncatula]
 gi|355521277|gb|AET01731.1| NBS resistance protein [Medicago truncatula]
          Length = 1079

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 150/282 (53%), Gaps = 35/282 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCG--SKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NI 61
           E+Q++P  F+KM++L+ L      SKN+  +    G+ F   ELRY  W  +PL++L + 
Sbjct: 571 ELQLSPRVFAKMSKLKFLDIYTKESKNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSK 630

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L +P S++ +LW  V++LV+L  + L  S LLT+LPD S A +L +LDL +C
Sbjct: 631 FSAENLVRLSLPYSRLKKLWHGVKDLVNLNVLILHSSTLLTELPDFSKATSLAVLDLQFC 690

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH---------------------SKYL 160
             LT  H S+  L  LE LDL  C SLTSL ++ H                     SK++
Sbjct: 691 VGLTSVHPSVFSLKNLEKLDLSGCISLTSLQSNTHLSSLSYLSLYNCTALKEFSVTSKHM 750

Query: 161 KRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLIYSCKRL 217
             L L G S +K LP  +S  L+S L  L +G   IE LP SIK L+ + +L  + C+ L
Sbjct: 751 SVLNLDGTS-IKELP--SSIGLQSKLTFLNLGRTHIESLPKSIKNLTRLRQLGFFYCREL 807

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ 259
           + +       Q LE + +  C +LQ +E  S   +  + K +
Sbjct: 808 KTLPELP---QSLEMLAVVGCVSLQNVEFRSTASEQLKEKRK 846



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 168/406 (41%), Gaps = 71/406 (17%)

Query: 382 GIERIPSSVLKLN-KCSKLESLPSSLCMFKSLT-SLEIIDCKKLERLPDELGNLEALEEL 439
           G+E +P+ +  L  +   LESLPS       +  SL     KKL     +L NL  L  +
Sbjct: 606 GLEFLPNELRYLRWEYYPLESLPSKFSAENLVRLSLPYSRLKKLWHGVKDLVNLNVL--I 663

Query: 440 RVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
               T + E+P      +L+ L L+ C    S+   ++  K+L  L++  C +   L   
Sbjct: 664 LHSSTLLTELPDFSKATSLAVLDLQFCVGLTSVHPSVFSLKNLEKLDLSGCISLTSLQSN 723

Query: 500 IGNL--------------------EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL 539
                                   +++ VL + GT+I+E+P S+G  S L +L L   ++
Sbjct: 724 THLSSLSYLSLYNCTALKEFSVTSKHMSVLNLDGTSIKELPSSIGLQSKLTFLNLGRTHI 783

Query: 540 QIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           + +P+S+  L+ L  L          L  +P+ L+ L+ +  + L   N++        F
Sbjct: 784 ESLPKSIKNLTRLRQLGFFYCRELKTLPELPQSLEMLAVVGCVSL--QNVE--------F 833

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWM----------------KQSVNGE 639
            ++   +    R  V   NCLKL+   L  I  +  +                 +  + +
Sbjct: 834 RSTASEQLKEKRKKVAFWNCLKLNEPSLKAIELNAQINMISFSYRHISELDHDNRDQDHD 893

Query: 640 TYITKSMY-FPGNEIPKWFRHQSTG-STISLKTPQPTGYNKLMGFAFCVVVACSVSECCR 697
             +  SMY +PG++IP+W  + +T    I++       ++KL GF    ++  + SE   
Sbjct: 894 QNLNHSMYLYPGSKIPEWLEYSTTTHDYITIDLFSAPYFSKL-GFILAFIIPTTTSEGST 952

Query: 698 HESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH-VESDHVFL 742
            +   +D + +          EG       YL +  H +ESDHV+L
Sbjct: 953 LKFEINDGEDD---------GEG----IKVYLRRPRHGIESDHVYL 985



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 38/168 (22%)

Query: 305 NLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS- 362
           +L  LN LI+   T + ELP+   +   L+ L+L+ C  L  +  S+F LK++E +++S 
Sbjct: 655 DLVNLNVLILHSSTLLTELPD-FSKATSLAVLDLQFCVGLTSVHPSVFSLKNLEKLDLSG 713

Query: 363 ----------------------NCSNLKGF----PEIPFCNIDGSGIERIPSSV------ 390
                                 NC+ LK F      +   N+DG+ I+ +PSS+      
Sbjct: 714 CISLTSLQSNTHLSSLSYLSLYNCTALKEFSVTSKHMSVLNLDGTSIKELPSSIGLQSKL 773

Query: 391 --LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             L L + + +ESLP S+     L  L    C++L+ LP+   +LE L
Sbjct: 774 TFLNLGR-THIESLPKSIKNLTRLRQLGFFYCRELKTLPELPQSLEML 820


>gi|297744796|emb|CBI38064.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 169/357 (47%), Gaps = 73/357 (20%)

Query: 30  KNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQN 86
           +  C +H    + F    LR   WH++PLK+L +  H + LV L M  S++ QLW   ++
Sbjct: 166 QTDCKLHLSGDLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSSRLEQLWKGDKS 225

Query: 87  LVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
              LK I L +S+ LT+ PD S A NLE L L  C+S+ + H SI  L KL  L+L+ CK
Sbjct: 226 FEKLKFIKLSHSQYLTRTPDFSGAPNLERLILEGCTSMVKVHPSIGALQKLIFLNLEGCK 285

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLS 204
           +L S  +SIH   L+ L L GCS LK  P+M   +++S   LL     + ELPSSI  L+
Sbjct: 286 NLKSFASSIHMNSLQILTLSGCSKLKKFPEMLE-NMKSLRQLLLDETALRELPSSIGRLN 344

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL 264
            +  L + +CK+L ++  S+ KL            +LQ L +  C+              
Sbjct: 345 GLVLLNLTNCKKLVSLPQSLCKLT-----------SLQILTLAGCS-------------- 379

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           +LKK P                              DELG+L+ L  L  DG+ I+E+P 
Sbjct: 380 ELKKLP------------------------------DELGSLRCLVNLNADGSGIQEVPP 409

Query: 325 GLGQLALLSKLELKNCSELEYISS------------SIFKLKSVESIEISNCSNLKG 369
            +  L  L  L L  C +   + S            S+  L SV+++ +S+C+  +G
Sbjct: 410 SITLLTNLQVLSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDCNLSEG 466



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 2/146 (1%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L  C  L+S  SS+ M  SL  L +  C KL++ P+ L N+++L +L ++ T +RE+P
Sbjct: 279 LNLEGCKNLKSFASSIHM-NSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETALRELP 337

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+ +L  L  L L  C    SLP  L    SL  L +  C    +LPDE+G+L  L  L
Sbjct: 338 SSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNL 397

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLS 535
              G+ I+EVP S+  L++L+ L L+
Sbjct: 398 NADGSGIQEVPPSITLLTNLQVLSLA 423



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 38/217 (17%)

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEI 290
            PNL+ L +  C    +  K  PS         L L+ C   +S  S   M  SL  L +
Sbjct: 249 APNLERLILEGCT---SMVKVHPSIGALQKLIFLNLEGCKNLKSFASSIHM-NSLQILTL 304

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   ++ P+ L N+++L +L++D TA+RELP  +G+L  L  L L NC +L  +  S+
Sbjct: 305 SGCSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSL 364

Query: 351 FKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS--------VLKLNK 395
            KL S++ + ++ CS LK  P+       +   N DGSGI+ +P S        VL L  
Sbjct: 365 CKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAG 424

Query: 396 CSK------LESLPS------SLCMFKSLTSLEIIDC 420
           C K      L S P+      SL    S+ +L + DC
Sbjct: 425 CKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDC 461


>gi|13517472|gb|AAK28808.1|AF310961_1 resistance-like protein P3-A [Linum usitatissimum]
          Length = 1110

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 218/468 (46%), Gaps = 63/468 (13%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------PF-------TELRYFEWHQ 53
            E+ +    F  M  L  LKF   + K   + L+ V      P+         LR+ +W  
Sbjct: 579  EMCLKANAFEGMNSLTFLKFESPEIKYPHYPLKNVKTKIHLPYYGLNSLPEGLRWLQWDG 638

Query: 54   FPLKTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +P K+L    + ++LV L + GS + + W+  D   LV+L  +DL+Y   L  +PD+S +
Sbjct: 639  YPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDLRYCANLIAIPDISSS 698

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
             NLE L L  C SL E    +QYL KL  LD++ CK+L  LP  + SK LK +       
Sbjct: 699  LNLEELLLCRCVSLVEVPFHVQYLTKLVTLDINYCKNLKRLPPKLDSKLLKHV------R 752

Query: 171  LKNL-----PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS------------ 213
            +KNL     P++ S  L     L G  + ELPS+I  +   G L ++             
Sbjct: 753  MKNLEVTCCPEIDSRELEE-FDLSGTSLGELPSAIYNVKQNGVLRLHGKNITKFPGITTI 811

Query: 214  CKRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPSCNIDGTRSKE--------QPSSEL 264
             KR +   +SI ++   +  + H+  +   L +  + ++ G R  E          S EL
Sbjct: 812  LKRFKLSGTSIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSIWNMISEEL 871

Query: 265  KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
             +   P  ESLP       +LTSL +  C +   +P  + NL++L  L +  T I+ LP 
Sbjct: 872  FICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPS 931

Query: 325  GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
             + +L  L  ++L++C  LE I +SI KL  + ++ +S C  +   PE+P          
Sbjct: 932  SIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELP---------- 981

Query: 385  RIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
              P+   L ++ C  L++LPS+ C    L ++    C +L++ +P E 
Sbjct: 982  --PNLKTLNVSGCKSLQALPSNTCKLLYLNTIHFDGCPQLDQAIPGEF 1027



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 190/442 (42%), Gaps = 53/442 (11%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q    +L  L++  C N   +PD   +L     L+    ++ E+P  +  L  L  L++ 
Sbjct: 672  QPQLVNLIVLDLRYCANLIAIPDISSSLNLEELLLCRCVSLVEVPFHVQYLTKLVTLDIN 731

Query: 339  NCSELEYI----SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
             C  L+ +     S + K   ++++E++ C  +    E+   ++ G+ +  +PS++  + 
Sbjct: 732  YCKNLKRLPPKLDSKLLKHVRMKNLEVTCCPEIDS-RELEEFDLSGTSLGELPSAIYNVK 790

Query: 395  K----------CSKLESLPSSLCMFK----SLTSLEIIDCKKLERLPDELGNLEALEELR 440
            +           +K   + + L  FK    S+  +++ D  +  +  D L  L     L 
Sbjct: 791  QNGVLRLHGKNITKFPGITTILKRFKLSGTSIREIDLADYHQQHQTSDGLL-LPKFHNLS 849

Query: 441  VEGTGIREV-PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
            + G    EV P S+  +   +L +      ESLP       +LTSL +  C++   +P  
Sbjct: 850  LTGNRQLEVLPNSIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTS 909

Query: 500  IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
            I NL  L  L +  T I+ +P S+ +L  L  + L D  +L+ IP S+++LS LV+L +S
Sbjct: 910  ISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMS 969

Query: 559  N----NNLERIPERLDPL--SSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDL 612
                  +L  +P  L  L  S  K L    +N  ++  YL                ++  
Sbjct: 970  GCEIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLL-YLN---------------TIHF 1013

Query: 613  RNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG----STISL 668
              C +LD     E + +  +  S++      + +   G+E+PKWF ++S      ST+ +
Sbjct: 1014 DGCPQLDQAIPGEFVANFLVHASLSPS--YERQVRCSGSELPKWFSYRSMEDEDCSTVKV 1071

Query: 669  KTP---QPTGYNKLMGFAFCVV 687
            + P       +  + G AF  V
Sbjct: 1072 ELPLANDSPDHPMIKGIAFGCV 1093


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 132/395 (33%), Positives = 191/395 (48%), Gaps = 36/395 (9%)

Query: 6    SEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWHQFPLK 57
            + I I    F+ M  LRLLK             NK  +      P  ELRY  WH +PL+
Sbjct: 751  TRIHITTEAFAMMKNLRLLKIHWDLESASTREDNKVKLSKDFEFPSHELRYLHWHGYPLE 810

Query: 58   TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEI 115
            +L +  + E+LV L M  S + +LW+    L  L  I +  S+ L ++PD+++ A NLE 
Sbjct: 811  SLPLGFYAEDLVELDMCYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLEK 870

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            L L  CSSL E H SI  LNKL +L+L  CK L   P+ I  K L+ L   GCS LK  P
Sbjct: 871  LILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFP 930

Query: 176  KMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
             +   ++ + L L      IEELPSSI  L+ +  L +  CK L+++ +SI KL+ LE++
Sbjct: 931  NIQG-NMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENL 989

Query: 234  RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
             +  C  L+     + N+D  +       EL L   P  E LPS     K L  L +  C
Sbjct: 990  SLSGCSQLESFPEVTENMDNLK-------ELLLDGTP-IEVLPSSIERLKGLVLLNLRKC 1041

Query: 294  PNFERLPDELGNLQAL-------------NRLIIDGTAIR-ELPEGLGQLALLSKLELKN 339
             N   L + + N   L             N  I D   I   +P G+  L  L KL+L  
Sbjct: 1042 KNLLSLSNGISNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSR 1101

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             + L  I + I +L +++ + ++ C +L G PE+P
Sbjct: 1102 NNFLS-IPAGISELTNLKDLRLAQCQSLTGIPELP 1135



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 189/484 (39%), Gaps = 126/484 (26%)

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C KL   PS + M K+L  L    C  L++ P+  GN+E L EL +  T I E+P S+  
Sbjct: 900  CKKLICFPSIIDM-KALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGH 958

Query: 456  L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
            L  L  L LK C + +SLP+ +   KSL +L +  C      P+   N++ LK L + GT
Sbjct: 959  LTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSQLESFPEVTENMDNLKELLLDGT 1018

Query: 515  AIREVPESLGQLSSLEWLVLSD-----------------------------NNLQI---- 541
             I  +P S+ +L  L  L L                               +NL I    
Sbjct: 1019 PIEVLPSSIERLKGLVLLNLRKCKNLLSLSNGISNGIGLRLPSSFSSFRSLSNLDISDCK 1078

Query: 542  -----IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
                 IP  +  L SL  L LS NN   IP  +  L++LK L L +  +L  IPE     
Sbjct: 1079 LIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLAQCQSLTGIPE----L 1134

Query: 596  PTSIPSEFTSLRLSVDLRNCLKLDPNELS------------------------------E 625
            P S+          +D  NC  L P   S                              +
Sbjct: 1135 PPSVR--------DIDAHNCTSLLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQ 1186

Query: 626  IIKDGWMKQSVNGETYITK-------------SMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            I    ++  + +  +  T              S+ FPG  IP+W  HQ+ GS+I ++ P 
Sbjct: 1187 IFPHIYVSSTASDSSVTTSPVMMQKLLENIAFSIVFPGTGIPEWIWHQNVGSSIKIQLPT 1246

Query: 673  PTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVV---CDRRSEGYDSYTSSYL 729
                +  +GFA C V+          E + +   C+L   V    D +  G+D +   + 
Sbjct: 1247 NWYSDDFLGFALCSVL----------EHLPERIICHLNSDVFNYGDLKDFGHDFH---WT 1293

Query: 730  GKISHVESDHVFLGSS--------IFAGENSCKRSDEFFFHIDR----SCCEVKKCGIHF 777
            G I  V S+HV+LG           F   N     +  F    R    +   VKKCG+  
Sbjct: 1294 GNI--VGSEHVWLGYQPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCL 1351

Query: 778  VHAQ 781
            ++A+
Sbjct: 1352 IYAE 1355



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 133/257 (51%), Gaps = 32/257 (12%)

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             K+L  L    C   ++ P+  GN++ L  L +  TAI ELP  +G L  L  L+LK C 
Sbjct: 912  MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 971

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--FCN-----IDGSGIERIPSSV---- 390
             L+ + +SI KLKS+E++ +S CS L+ FPE+     N     +DG+ IE +PSS+    
Sbjct: 972  NLKSLPTSICKLKSLENLSLSGCSQLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLK 1031

Query: 391  ----LKLNKCSKLES------------LPSSLCMFKSLTSLEIIDCKKLE-RLPDELGNL 433
                L L KC  L S            LPSS   F+SL++L+I DCK +E  +P+ + +L
Sbjct: 1032 GLVLLNLRKCKNLLSLSNGISNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSL 1091

Query: 434  EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
             +L++L +       +P  +++L  L  L+L +C S   +P    +  S+  ++  +C +
Sbjct: 1092 ISLKKLDLSRNNFLSIPAGISELTNLKDLRLAQCQSLTGIPE---LPPSVRDIDAHNCTS 1148

Query: 493  FMRLPDEIGNLEYLKVL 509
             +     +  L+ L+ L
Sbjct: 1149 LLPGSSSVSTLQGLQFL 1165


>gi|356558721|ref|XP_003547651.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1054

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/253 (36%), Positives = 139/253 (54%), Gaps = 16/253 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC----------MVHSLEGVPFTELRYFEWHQFPL 56
           ++++NP  F+KM +L  L F    +            +   LE +P  ELRY  W  +PL
Sbjct: 570 QLRLNPQVFTKMNKLHFLNFYSVWSSSTFLQDPWGLYLSQGLESLP-NELRYLRWTHYPL 628

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           ++L +    ENLV L +P S+V +LW  V +LV+LK + L  S  + +LPDLS A NLEI
Sbjct: 629 ESLPSKFSAENLVELHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEI 688

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           + L +C  LT  H S+  L KLE LDL  C SLTSL ++IH + L+ L L GC  LK+  
Sbjct: 689 IGLRFCVGLTRVHPSVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFS 748

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
            ++   ++  L L    I++LP SI   S + ++L  +   +E + +SI  L  L  + +
Sbjct: 749 VISKNLVKLNLEL--TSIKQLPLSIGSQSML-KMLRLAYTYIETLPTSIKHLTRLRHLDL 805

Query: 236 HRCPNLQFL-EMP 247
             C  L+ L E+P
Sbjct: 806 RYCAGLRTLPELP 818



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 53/311 (17%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLEALEELRVEGTGI 446
           VLKL+  + ++ LP       + T+LEII    C  L R+   + +L+ LE         
Sbjct: 665 VLKLHSSAHVKELPD----LSTATNLEIIGLRFCVGLTRVHPSVFSLKKLE--------- 711

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
                        KL L  C+S  SL S +++ +SL  L +  C   + L D     + L
Sbjct: 712 -------------KLDLGGCTSLTSLRSNIHM-QSLRYLSLHGC---LELKDFSVISKNL 754

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
             L ++ T+I+++P S+G  S L+ L L+   ++ +P S+  L+ L  L L     L  +
Sbjct: 755 VKLNLELTSIKQLPLSIGSQSMLKMLRLAYTYIETLPTSIKHLTRLRHLDLRYCAGLRTL 814

Query: 566 PERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
           PE L P  SL+ LD+ E  +L+ +      FP SIP +    +  V   NCL+LD   L 
Sbjct: 815 PE-LPP--SLETLDVRECVSLETV-----MFP-SIPQQRKENKKKVCFWNCLQLDEYSLM 865

Query: 625 EIIKDGWMKQSVNGETYITK------SMYFPGNEIPKWFRHQST-GSTISLKTPQPTGYN 677
            I  +  +        +++       +  +PG+++P+W  H++  G      T  P  ++
Sbjct: 866 AIEMNAQINMVKFAHQHLSTFRDAQGTYVYPGSDVPQWLDHKTRHGYDDDYVTIAP--HS 923

Query: 678 KLMGFAFCVVV 688
             +GF F  +V
Sbjct: 924 SHLGFIFGFIV 934


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 137/439 (31%), Positives = 199/439 (45%), Gaps = 74/439 (16%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCMV-HSLEGVPFTELRYFEWHQFPLKTLN 60
           ++I  ++ ++   F  M+ L+ L+  G+ N   + H LE +   +LR  +W  FP+  L 
Sbjct: 591 NRIKEKLHLSERAFQGMSNLQFLRVKGNNNTIHLPHGLEYIS-RKLRLLDWTYFPMTCLP 649

Query: 61  -ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
            I + + LV L M  SK+ +LW+ ++ L +LKR+DL  S LL +LPDLS A NL  L+L 
Sbjct: 650 PIFNTDFLVELDMRCSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTATNLRTLNLR 709

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
           YCSSL    SSI     LE+L L  C SL  LP+SI              NL NL ++  
Sbjct: 710 YCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSI-------------GNLINLKELDL 756

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             L   +        ELP SI  L N+  L + S   L  +  SI     LE + + +C 
Sbjct: 757 SSLSCLV--------ELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQCS 808

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           NL  L     N+       Q    L L+ C + E LP+      SL SL++ DC   +R 
Sbjct: 809 NLVKLPFSIGNL-------QKLQTLNLRGCSKLEVLPA-NIKLGSLWSLDLTDCILLKRF 860

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P+   N   +  + + GT I E+P                        SSI        +
Sbjct: 861 PEISTN---VGFIWLIGTTIEEVP------------------------SSIKSWSRPNEV 893

Query: 360 EISNCSNLKGFPE----IPFCNIDGSGIERIPS--------SVLKLNKCSKLESLPSSLC 407
            +S   NLK FP     I    +  + I+ +P         +VLKL  C KL SLP    
Sbjct: 894 HMSYSENLKNFPHAFDIITRLQVTNTEIQEVPPWVNKFSRLTVLKLKGCKKLVSLPQ--- 950

Query: 408 MFKSLTSLEIIDCKKLERL 426
           +  S++ ++  DC+ LERL
Sbjct: 951 IPDSISDIDAEDCESLERL 969



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 214/504 (42%), Gaps = 104/504 (20%)

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV 390
             L +L+++ CS+LE +   I  L +++ +++S+   LK  P++                 
Sbjct: 656  FLVELDMR-CSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTAT---------NLRT 705

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREV 449
            L L  CS L +LPSS+    +L  L +  C  L  LP  +GNL  L+EL +     + E+
Sbjct: 706  LNLRYCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLVEL 765

Query: 450  PKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P S+  L  L  L L   S    LP  +  + +L  L +  C N ++LP  IGNL+ L+ 
Sbjct: 766  PFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQT 825

Query: 509  LTIKGTAIREVPES---LGQLSSLE--------------------WLVLSDNNLQIIPES 545
            L ++G +  EV  +   LG L SL+                    WL+     ++ +P S
Sbjct: 826  LNLRGCSKLEVLPANIKLGSLWSLDLTDCILLKRFPEISTNVGFIWLI--GTTIEEVPSS 883

Query: 546  LNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFT 604
            +   S    + +S + NL+  P   D ++ L+  +     +  +P ++  F     S  T
Sbjct: 884  IKSWSRPNEVHMSYSENLKNFPHAFDIITRLQVTN---TEIQEVPPWVNKF-----SRLT 935

Query: 605  SLRL-----------------SVDLRNCLKLDPNELSEIIKDGWMKQS----VNGE---- 639
             L+L                  +D  +C  L+  + S    + W+K +    +N E    
Sbjct: 936  VLKLKGCKKLVSLPQIPDSISDIDAEDCESLERLDCSFHNPNIWLKFAKCFKLNQEARDL 995

Query: 640  ---TYITKSMYFPGNEIPKWFRHQS-TGSTISLK---TPQPTGYNKLMGFAFCVVVACSV 692
               T  +KS   PG E+P +F HQS TG ++++K    P PT     M F  C+++   V
Sbjct: 996  IIQTPTSKSAVLPGREVPAYFTHQSTTGGSLTIKLNEKPLPTS----MRFKACILL---V 1048

Query: 693  SECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENS 752
             +    E+  D   C +F   C +  +            +  V  +HV+    +F  E  
Sbjct: 1049 HKGDNEENWMDKNDCYVF---CKKSRQ-----------HLYPVLEEHVY----VFEVEAD 1090

Query: 753  CKRSDEFF-FHIDRSCCEVKKCGI 775
               S+  F F I     ++K+CG+
Sbjct: 1091 VTSSELVFEFKIRSKNWKIKECGV 1114


>gi|297794601|ref|XP_002865185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311020|gb|EFH41444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1185

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 196/376 (52%), Gaps = 20/376 (5%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF----CGSKNKCMVHSLEGVPF--TELRYFEWHQF 54
           M +I+ E+ I+   F  M  L  LKF       KN+   H  EG  +   +LR      +
Sbjct: 541 MDEID-ELHIHENAFKGMRNLIFLKFYTKKWDQKNEVRWHLPEGFNYLPHKLRLLRLDGY 599

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P++ + +    ENLV L MPGSK+ +LW+ VQ L  LK I+L  SK L ++P+LS+A NL
Sbjct: 600 PMRHMPSNFRTENLVELHMPGSKLERLWEGVQELKGLKTINLHRSKNLKEIPNLSMATNL 659

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           E L LG CSSL E  SS+QYLNKL+ L +  C +L  LPT I+ + L  L L+GCS LK 
Sbjct: 660 EELHLGDCSSLVELSSSVQYLNKLKSLVMSGCINLEILPTGINLQSLFSLNLKGCSGLKI 719

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK-RLENISSSIFKLQFLES 232
            P +++    S L L    IEE PS+++  + +   +   C+ + + +      L  L +
Sbjct: 720 FPNISTN--ISWLILDETSIEEFPSNLRLDNLLLLSM---CRMKSQKLWDRKQPLTPLMA 774

Query: 233 IRIHRCPNLQFLEMPS-CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           +  H    L   ++PS  +I  +         L ++ C   E+LP+G   F  L SL + 
Sbjct: 775 MLPHSLEELFLSDIPSLVDIPSSIQNFTHLDCLGIEDCINLETLPTG-INFHHLESLNLS 833

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C   +  P+   N++   +L +  T I E+P  + +   L  + ++ C+ L  +S +I+
Sbjct: 834 GCSRLKTFPNISTNIE---QLYLQRTGIEEVPWWIEKFTKLDYITMEKCNNLIRVSLNIY 890

Query: 352 KLKSVESIEISNCSNL 367
           KLK +  ++ S+C +L
Sbjct: 891 KLKRL-MVDFSDCGSL 905



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 198/536 (36%), Gaps = 137/536 (25%)

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            H    L L G  +  +PS+ +   N+ EL +   K LE +   + +L+ L++I +HR  N
Sbjct: 589  HKLRLLRLDGYPMRHMPSNFRT-ENLVELHMPGSK-LERLWEGVQELKGLKTINLHRSKN 646

Query: 241  LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            L+  E+P+ +                              M  +L  L + DC +   L 
Sbjct: 647  LK--EIPNLS------------------------------MATNLEELHLGDCSSLVELS 674

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
              +  L  L  L++ G                       C  LE + + I  L+S+ S+ 
Sbjct: 675  SSVQYLNKLKSLVMSG-----------------------CINLEILPTGI-NLQSLFSLN 710

Query: 361  ISNCSNLKGFPEIP----FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
            +  CS LK FP I     +  +D + IE  PS++           L  S+C  KS     
Sbjct: 711  LKGCSGLKIFPNISTNISWLILDETSIEEFPSNL------RLDNLLLLSMCRMKS----- 759

Query: 417  IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
                +KL      L  L A+            +P SL +L LS +      S   +PS +
Sbjct: 760  ----QKLWDRKQPLTPLMAM------------LPHSLEELFLSDI-----PSLVDIPSSI 798

Query: 477  YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG---------------------TA 515
                 L  L I DC N   LP  I N  +L+ L + G                     T 
Sbjct: 799  QNFTHLDCLGIEDCINLETLPTGI-NFHHLESLNLSGCSRLKTFPNISTNIEQLYLQRTG 857

Query: 516  IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            I EVP  + + + L+++ +   NNL  +  ++ +L  L+       +L        P   
Sbjct: 858  IEEVPWWIEKFTKLDYITMEKCNNLIRVSLNIYKLKRLMVDFSDCGSLTEASWNGSPSEV 917

Query: 575  LKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
                D   +    + E   S P S P EF          + L LDP  L        ++Q
Sbjct: 918  AMVTDNIHSKFPVLEEAFYSDPDSTPPEFWF------NFHFLNLDPEAL--------LRQ 963

Query: 635  SVNGETYITKSMYFPGNEIPKWFRHQSTG-STISLKTPQPTGYNKLMGFAFCVVVA 689
                  +I  S+   G E+P +F HQ+T  S  S+   QP+   +   F  C VV+
Sbjct: 964  R-----FIFNSITLSGEEVPSYFTHQTTEISLTSIPLLQPSLSQQFFKFKACAVVS 1014


>gi|357449525|ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
 gi|355484087|gb|AES65290.1| TMV resistance protein N [Medicago truncatula]
          Length = 1128

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 170/337 (50%), Gaps = 24/337 (7%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL 59
           SKI  ++ ++  +F  M  LRLL      N   VH  EG+ +   +LRY  W  FPL++L
Sbjct: 551 SKI-GDVYLSSRSFESMINLRLLHIANECNN--VHLQEGLEWLSDKLRYLHWESFPLESL 607

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            +    +NLV L M  SK+ +LWD +Q L +L  I L  S+ L ++PDLS A NL+IL L
Sbjct: 608 PSTFCAQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSL 667

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
            YC SL + H SI    KL  L L  CK + SL T IHSK L+RL L  CS+L     +T
Sbjct: 668 AYCVSLHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFC-VT 726

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI--- 235
           S  ++  L L G  I E  S +   S +  L +  CK+L  +   +   + LES+ I   
Sbjct: 727 SEEMK-WLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNL 785

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG--QCMFKSLTSLEIIDC 293
             C  +  L M S  +D  R  +     L L+ C   E+LP     C+   L SL +  C
Sbjct: 786 SGCTQINTLSM-SFILDSARFLKY----LNLRNCCNLETLPDNIQNCLM--LRSLHLDGC 838

Query: 294 PNFE---RLPDELGNLQALNRLIIDGTAI-RELPEGL 326
            N     +LP  L  L A+N   +D  +I RE+ E +
Sbjct: 839 INLNSLPKLPASLEELSAINCTYLDTNSIQREMLENM 875



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 54/266 (20%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            S ++I+ P+  R P    NL+ L+  +    ++ +L   +     L +L LK C ++E 
Sbjct: 646 NSEDLIEIPDLSRAP----NLKILS--LAYCVSLHQLHPSIFSAPKLRELCLKGCKKIES 699

Query: 346 ISSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           + + I   KS++ +++++CS+L  F     E+ + ++ G+ I    S +L+ +K      
Sbjct: 700 LVTDIHS-KSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIHEFSSLMLRNSK------ 752

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGN---LEALEELRVEG-TGIREVPKSL---A 454
                     L  L++ DCKKL  +  +L N   LE+L  L + G T I  +  S    +
Sbjct: 753 ----------LDYLDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDS 802

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
              L  L L+ C + E+LP  +     L SL +  C N   LP                 
Sbjct: 803 ARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLP----------------- 845

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQ 540
              ++P SL +LS++    L  N++Q
Sbjct: 846 ---KLPASLEELSAINCTYLDTNSIQ 868



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 44/274 (16%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKL 399
           S+L  +   I KL ++  I++ N  +L   P++           R P+  +L L  C  L
Sbjct: 624 SKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLS----------RAPNLKILSLAYCVSL 673

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
             L  S+     L  L +  CKK+E L  ++ + ++L+ L +          SL Q  ++
Sbjct: 674 HQLHPSIFSAPKLRELCLKGCKKIESLVTDIHS-KSLQRLDLTDCS------SLVQFCVT 726

Query: 460 KLKLK----KCSSFESLPSRLYVSKSLTSLEIIDCK--NFM--RLPDEIGNLEYLKVLTI 511
             ++K    + ++     S +  +  L  L++ DCK  NF+  +L ++ G LE L +L +
Sbjct: 727 SEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRG-LESLSILNL 785

Query: 512 KG-TAIREVPES--LGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN----NNLE 563
            G T I  +  S  L     L++L L +  NL+ +P+++     L SL L      N+L 
Sbjct: 786 SGCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLP 845

Query: 564 RIPERLDPLSSLK--YLD-------LFENNLDRI 588
           ++P  L+ LS++   YLD       + EN L R+
Sbjct: 846 KLPASLEELSAINCTYLDTNSIQREMLENMLYRL 879


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 171/349 (48%), Gaps = 46/349 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N   FSKM +L+LL          +H+L    G  F    LR+  W  +P K+L  
Sbjct: 528 EADWNLEAFSKMCKLKLL---------YIHNLRLSVGPKFLPNALRFLNWSWYPSKSLPP 578

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + LV L +P SK+  LW+  + L +LK IDL YS  LT+ PD +   NLE L L  
Sbjct: 579 CFQPDELVELSLPYSKIDHLWNGKKCLDNLKSIDLSYSINLTRTPDFTGIPNLEKLILEG 638

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTS 179
           C++L + H SI  L +L++ +L  C+S+ SLP+ ++ ++L+ L + GCS LK +PK M  
Sbjct: 639 CTNLVDIHPSIALLKRLKIWNLRNCQSIKSLPSEVYMEFLETLDVTGCSKLKMIPKFMQK 698

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
               S L L G  +E+LPS                  +E +S S+ +L     +R  R P
Sbjct: 699 TKRLSKLSLSGTAVEKLPS------------------IEQLSESLVELDLSGVVRRER-P 739

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+     I G       S  L  +K P P   L +    F SLT L + DC   E 
Sbjct: 740 YSLFLQ----QILGV-----SSFGLFPRKSPHPLIPLLASLKHFSSLTELYLNDCNLSEG 790

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            LP+++G+L +L RL + G     LP  +  L+ L +  ++NC  L+ +
Sbjct: 791 ELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNVENCKRLQQL 839



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 214/480 (44%), Gaps = 76/480 (15%)

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
            L +++SI++S   NL   P       D +GI  +   +L+   C+ L  +  S+ + K L
Sbjct: 605  LDNLKSIDLSYSINLTRTP-------DFTGIPNLEKLILE--GCTNLVDIHPSIALLKRL 655

Query: 413  TSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFE 470
                + +C+ ++ LP E+  +E LE L V G + ++ +PK + +   LSKL L   ++ E
Sbjct: 656  KIWNLRNCQSIKSLPSEV-YMEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSG-TAVE 713

Query: 471  SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE-------SL 523
             LPS   +S+SL  L++       R P  +   + L V +  G   R+ P        SL
Sbjct: 714  KLPSIEQLSESLVELDLSGVVRRER-PYSLFLQQILGVSSF-GLFPRKSPHPLIPLLASL 771

Query: 524  GQLSSLEWLVLSDNNLQI--IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
               SSL  L L+D NL    +P  +  LSSLV L+L  NN   +P  +  LS L+  ++ 
Sbjct: 772  KHFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNV- 830

Query: 582  EN--NLDRIPEYLRSFPTSIPSEFTSLRL---------SVDLRNCLKLDPNE-----LSE 625
            EN   L ++PE   +   S     TSL+L          ++  NCL +  N+     L  
Sbjct: 831  ENCKRLQQLPELWANDVLSRTDNCTSLQLFFGRITTHFWLNCVNCLSMVGNQDVSYLLYS 890

Query: 626  IIKDGWMKQSVNGETYITKSM-------------YFPGNEIPKWFRHQSTGSTISLK-TP 671
            ++K  W++  V     +T  M               PG+EIP+WF +QS G  ++ K  P
Sbjct: 891  VLKR-WIEIQVLSRCDMTVHMQETHRRPLEYLDFVIPGSEIPEWFNNQSVGDRVTEKLLP 949

Query: 672  QPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGK 731
                 +K +GFA C ++    +     E    D    L  + C+       +Y  + LG 
Sbjct: 950  WDACNSKWIGFAVCALIVPQDNPSAVPEDPLLDPDTCL--ISCNW------NYYGTKLGG 1001

Query: 732  IS----HVESDH---VFLGSSIFAGENSCKRSDEFFFHI----DRSCCEVKKCGIHFVHA 780
            +        SDH   V L S +   EN C  ++  F  I     + C +VKKCG+  ++ 
Sbjct: 1002 VGICVKQFVSDHLSLVVLPSPLRTPEN-CLEANFVFKFIRAVGSKRCMKVKKCGVRALYG 1060



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 48/247 (19%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           + L +G+    +L S+++    N  R PD  G +  L +LI++G T + ++   +  L  
Sbjct: 596 DHLWNGKKCLDNLKSIDLSYSINLTRTPDFTG-IPNLEKLILEGCTNLVDIHPSIALLKR 654

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIE 384
           L    L+NC  ++ + S ++ ++ +E+++++ CS LK  P+       +   ++ G+ +E
Sbjct: 655 LKIWNLRNCQSIKSLPSEVY-MEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSGTAVE 713

Query: 385 RIPS------SVLKLN-------------------KCSKLESLP-----------SSLCM 408
           ++PS      S+++L+                     S     P           +SL  
Sbjct: 714 KLPSIEQLSESLVELDLSGVVRRERPYSLFLQQILGVSSFGLFPRKSPHPLIPLLASLKH 773

Query: 409 FKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
           F SLT L + DC   E  LP+++G+L +L  L + G     +P S+  L+ L +  ++ C
Sbjct: 774 FSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNVENC 833

Query: 467 SSFESLP 473
              + LP
Sbjct: 834 KRLQQLP 840


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 203/431 (47%), Gaps = 46/431 (10%)

Query: 4   INSEIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKT 58
           I   I I+   F +M  L+ L+F    G +   +++  +G+     +LR   W ++PL  
Sbjct: 567 IEGVINISERAFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTC 626

Query: 59  LN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L    + E LV + M  S + +LWD  + + +LK +DL +   L +LPD S A NL+ L 
Sbjct: 627 LPPKFNPEFLVKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELR 686

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
           L  C SL E  SSI  +  L  LDL  C SL  LP+SI +   LK+L L  CS+L     
Sbjct: 687 LINCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLV---- 742

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
                             +LPSS   ++++ EL +  C  L  I SSI  +  L+ +   
Sbjct: 743 ------------------KLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKLYAD 784

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C +L  +++PS   + T  K     EL L  C      PS       L  L +  C + 
Sbjct: 785 GCSSL--VQLPSSIGNNTNLK-----ELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSL 837

Query: 297 ERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +LP  +GN+  L  L + D +++ ELP  +     L  L L  CS L  + SSI+ + +
Sbjct: 838 VKLP-SIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITN 896

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++S+ ++ CS+LK  P +    I+           L L KCS L  LPSS+    +L+ L
Sbjct: 897 LQSLYLNGCSSLKELPSLVENAINLQS--------LSLMKCSSLVELPSSIWRISNLSYL 948

Query: 416 EIIDCKKLERL 426
           ++ +C  L  L
Sbjct: 949 DVSNCSSLVEL 959



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 230/517 (44%), Gaps = 86/517 (16%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L +I+C +   LP  +GN+  L  L +ID +++ +LP  +G L  L KL L  CS 
Sbjct: 681  NLQELRLINCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSS 740

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLES 401
            L  + SS   + S++ + +S CS+L    EIP      S I  I +   L  + CS L  
Sbjct: 741  LVKLPSSFGNVTSLKELNLSGCSSLL---EIP------SSIGNIVNLKKLYADGCSSLVQ 791

Query: 402  LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSK 460
            LPSS+    +L  L +++C  L   P  + NL  LE+L + G   + ++P     + L  
Sbjct: 792  LPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQS 851

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREV 519
            L L  CSS   LP  +  + +L +L +  C N + LP  I N+  L+ L + G ++++E+
Sbjct: 852  LYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKEL 911

Query: 520  PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
            P             L +N + +   SL + SSLV L          P  +  +S+L YLD
Sbjct: 912  PS------------LVENAINLQSLSLMKCSSLVEL----------PSSIWRISNLSYLD 949

Query: 580  ------LFENNLDR---IPEYL-------RSFPTSIPSEFTSLRLSVDLRNCLKLDPNEL 623
                  L E NL     +P+ L        S    +   F + ++ ++  NC KL+    
Sbjct: 950  VSNCSSLVELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVLNFANCFKLNQEAR 1009

Query: 624  SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFA 683
              II           +T   ++   PG ++P +F +++TG ++++K  Q      L  F 
Sbjct: 1010 DLII-----------QTSACRNAILPGEKVPAYFTYRATGDSLTVKLNQKYLLQSLR-FK 1057

Query: 684  FCVVVACSVSECCRHESVEDDRKCNLF--DVVCDRRSEGYDS-YTSSYLGKISHVESDHV 740
             C+++            VE   K   +  ++V  R  +G+   YT S     SH++   +
Sbjct: 1058 ACLLL------------VEGQNKWPNWGMNLVTSREPDGHIVLYTPS-----SHLQGPLL 1100

Query: 741  FLGSSIFAGENSCKRSDEFF--FHIDRSCCEVKKCGI 775
                  F  E     S EF   F  DR  C V +CG+
Sbjct: 1101 MENLYTFEFE-LVVTSSEFVLEFRADRYKCAVSECGL 1136



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC 145
           NL  L+ ++L     L KLP +    NL+ L L  CSSL E   +I+    L+ L LD C
Sbjct: 822 NLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGC 881

Query: 146 KSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLS 204
            +L  LP+SI +   L+ L L GCS+LK                      ELPS ++   
Sbjct: 882 SNLLELPSSIWNITNLQSLYLNGCSSLK----------------------ELPSLVENAI 919

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           N+  L +  C  L  + SSI+++  L  + +  C +L  L + S
Sbjct: 920 NLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLVELNLVS 963



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 3/141 (2%)

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             ++E+P       L +L+L  C S   LPS +    +L  L++IDC + ++LP  IGNL
Sbjct: 668 VNLKELPDFSTATNLQELRLINCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNL 727

Query: 504 EYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-N 560
             LK L + + +++ ++P S G ++SL+ L LS  ++L  IP S+  + +L  L     +
Sbjct: 728 TNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKLYADGCS 787

Query: 561 NLERIPERLDPLSSLKYLDLF 581
           +L ++P  +   ++LK L L 
Sbjct: 788 SLVQLPSSIGNNTNLKELHLL 808



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 66  NLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL-SLAQNLEILDLGYCSS 123
           NL +L + G S + +L   + N+ +L+ + L     L +LP L   A NL+ L L  CSS
Sbjct: 872 NLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSS 931

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
           L E  SSI  ++ L  LD+  C SL  L    H      L+L
Sbjct: 932 LVELPSSIWRISNLSYLDVSNCSSLVELNLVSHPVVPDSLIL 973


>gi|13517477|gb|AAK28810.1|AF310964_1 resistance-like protein P4-B [Linum usitatissimum]
          Length = 1202

 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 208/454 (45%), Gaps = 46/454 (10%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------PFTEL-------RYFEWHQ 53
            E+ +    F  M  L  LKF   + K   H L+ V      P+  L       R+  W  
Sbjct: 595  EMYLKANAFEGMNSLTFLKFESPEMKYPHHRLKNVKMKIHLPYDGLNSLPEGLRWLHWDA 654

Query: 54   FPLKTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +P K+L    + ++LV L +  S + + W+  D   LV+L  +DL Y   L  +PD+S +
Sbjct: 655  YPSKSLPAKFYPQHLVHLIIRRSPIRRCWEGYDQPQLVNLIVLDLCYCANLITIPDISSS 714

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
             NLE L L  C SL E  S +QYL KL  LD+  C++L  LP  + SK LK + ++    
Sbjct: 715  LNLEELLLLRCVSLVEVPSHVQYLTKLVTLDISHCENLKPLPPKLDSKLLKHVRMKNLE- 773

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY------------SCKRLE 218
            +   P++ S  L     L G  + ELPS+I  +   G L ++            + +R  
Sbjct: 774  ITRCPEIDSRELEE-FDLSGTSLGELPSAIYNVKQNGYLHLHGKNITKFPGITTTLERFT 832

Query: 219  NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
               +SI ++ F +  + H+  NL   +     +         S +L +   P  ESLP  
Sbjct: 833  LSGTSIREIDFADYHQQHQ--NLWLTDNRQLEVLPNGIWNMISEQLWIGWSPLIESLPEI 890

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
                 +LTSL +  C +   +P  + NL++L  L +  T I+ LP  + +L  L   EL+
Sbjct: 891  SEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSETGIKSLPSSIQELRQLHFFELR 950

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCS 397
             C  LE I +SI KL  + ++ +S C  +   PE+P            P+   L +++C 
Sbjct: 951  YCESLESIPNSIHKLSKLVTLSMSGCEIIISLPELP------------PNLKELDVSRCK 998

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
             L++LPS+ C    L  +    C +L++ +P E 
Sbjct: 999  SLQALPSNTCKLLYLNLIHFEGCPQLDQAIPAEF 1032



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 184/426 (43%), Gaps = 67/426 (15%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q    +L  L++  C N   +PD   +L     L++   ++ E+P  +  L  L  L++ 
Sbjct: 688  QPQLVNLIVLDLCYCANLITIPDISSSLNLEELLLLRCVSLVEVPSHVQYLTKLVTLDIS 747

Query: 339  NCSELE----YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
            +C  L+     + S + K   ++++EI+ C  +    E+   ++ G+ +  +PS++  + 
Sbjct: 748  HCENLKPLPPKLDSKLLKHVRMKNLEITRCPEIDS-RELEEFDLSGTSLGELPSAIYNVK 806

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV----- 449
            +   L     ++  F  +T+                     LE   + GT IRE+     
Sbjct: 807  QNGYLHLHGKNITKFPGITT--------------------TLERFTLSGTSIREIDFADY 846

Query: 450  ------------------PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
                              P  +  +   +L +      ESLP       +LTSL +  C+
Sbjct: 847  HQQHQNLWLTDNRQLEVLPNGIWNMISEQLWIGWSPLIESLPEISEPMNTLTSLHVYCCR 906

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
            +   +P  I NL  L  L +  T I+ +P S+ +L  L +  L    +L+ IP S+++LS
Sbjct: 907  SLTSIPTSISNLRSLGSLCLSETGIKSLPSSIQELRQLHFFELRYCESLESIPNSIHKLS 966

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             LV+L +S    +  +PE L P  +LK LD+         + L++ P++   +   L L 
Sbjct: 967  KLVTLSMSGCEIIISLPE-LPP--NLKELDVSR------CKSLQALPSNT-CKLLYLNL- 1015

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG----ST 665
            +    C +LD    +E + +  +  S++      + +   G+E+P+WF ++S      ST
Sbjct: 1016 IHFEGCPQLDQAIPAEFVANFLVHASLSPSH--DRQVRCSGSELPEWFSYRSMEDEDCST 1073

Query: 666  ISLKTP 671
            + ++ P
Sbjct: 1074 VKVELP 1079


>gi|227438245|gb|ACP30612.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 886

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 49/290 (16%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCG-----SKNKCMVHSLEGVPFTELRYFEWHQFP 55
           MSKIN ++ I+   F +M  L+ L+        S   C+ H L+ +P  +LR   W  +P
Sbjct: 551 MSKINDDVCISEKAFDRMHNLQFLRLYTNFQDESFKLCLPHGLDRLPH-KLRLLHWDSYP 609

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           +K + +    E LV L M  SK+ +LW+ +Q L SLK++DL  S  +  +P+LS A NLE
Sbjct: 610 IKCMPSRFRPEFLVELSMRDSKLEKLWEGIQPLTSLKQMDLSASTKIKDIPNLSKATNLE 669

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            L L +C +L    SS+Q LNKL+VLD+  C  L +LPT+++ + L  L ++GCS L+  
Sbjct: 670 KLYLRFCKALASVPSSLQNLNKLKVLDMSSCVRLNALPTNMNLESLSVLNMKGCSKLRIF 729

Query: 175 P--------------------------------KMTSCHLRSTLPLL----------GVG 192
           P                                +M+ C    T P L            G
Sbjct: 730 PEISSQVKFMSVGETAIEEVPLSISLWPQLISLEMSGCKKLKTFPKLPASVEVLDLSSTG 789

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
           IEE+P  I+  S +  + + +CK+L+ +  SI+K++ LE + +  C  L+
Sbjct: 790 IEEIPWGIENASQLLIMCMANCKKLKCVPPSIYKMKHLEDVDLSGCSELR 839



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 17/208 (8%)

Query: 296 FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            E+L + +  L +L ++ +   T I+++P  L +   L KL L+ C  L  + SS+  L 
Sbjct: 632 LEKLWEGIQPLTSLKQMDLSASTKIKDIP-NLSKATNLEKLYLRFCKALASVPSSLQNLN 690

Query: 355 SVESIEISNCSNLKGFP------EIPFCNIDGSGIERI---PSSVLKLNKC--SKLESLP 403
            ++ +++S+C  L   P       +   N+ G    RI    SS +K      + +E +P
Sbjct: 691 KLKVLDMSSCVRLNALPTNMNLESLSVLNMKGCSKLRIFPEISSQVKFMSVGETAIEEVP 750

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
            S+ ++  L SLE+  CKKL+  P    ++E L+   +  TGI E+P  +   + L  + 
Sbjct: 751 LSISLWPQLISLEMSGCKKLKTFPKLPASVEVLD---LSSTGIEEIPWGIENASQLLIMC 807

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           +  C   + +P  +Y  K L  +++  C
Sbjct: 808 MANCKKLKCVPPSIYKMKHLEDVDLSGC 835



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 10/171 (5%)

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           KLE+L + +  L +L+++ +   T I+++P       L KL L+ C +  S+PS L    
Sbjct: 631 KLEKLWEGIQPLTSLKQMDLSASTKIKDIPNLSKATNLEKLYLRFCKALASVPSSLQNLN 690

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNL 539
            L  L++  C     LP  + NLE L VL +KG + +R  PE   Q   ++++ + +  +
Sbjct: 691 KLKVLDMSSCVRLNALPTNM-NLESLSVLNMKGCSKLRIFPEISSQ---VKFMSVGETAI 746

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + +P S++    L+SL++S    L+  P+   P +S++ LDL    ++ IP
Sbjct: 747 EEVPLSISLWPQLISLEMSGCKKLKTFPKL--P-ASVEVLDLSSTGIEEIP 794


>gi|13517483|gb|AAK28812.1|AF310968_1 resistance-like protein PH-B [Linum usitatissimum]
          Length = 1202

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 213/462 (46%), Gaps = 62/462 (13%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------PFTEL-------RYFEWHQ 53
            E+ +    F  M  L  LKF   + +   + L+ V      P+  L       R+ +W  
Sbjct: 595  EMYLKANAFEGMNSLTFLKFESPEIEYPYYRLKNVKMKIHLPYDGLNSLPEGLRWLQWDG 654

Query: 54   FPLKTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +P K+L    + ++LV L +  S + + W+  D   LV+L  +DL Y   +  +PD+S +
Sbjct: 655  YPSKSLPAKFYPQHLVHLIIRRSPIRRCWEGYDQPQLVNLIVLDLCYCANIIAIPDISSS 714

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
             N+E L L  C SL E    +QYL KL  LD+  C++L  LP  + SK LK +       
Sbjct: 715  LNIEELLLFGCKSLVEVPFHVQYLTKLVTLDISHCENLKPLPPKLDSKLLKHV------R 768

Query: 171  LKNL-----PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS---- 221
            +KNL     P++ S  L     L G  + ELPS+I  +   G L ++     +NI+    
Sbjct: 769  MKNLEVTCCPEIDSRELEE-FDLSGTSLGELPSAIYNIKQNGVLHLHG----KNITKFPG 823

Query: 222  -SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE----------QPSSELKLKKCP 270
             ++I KL  L    I R  +L        N+  T +++            S +L +   P
Sbjct: 824  ITTILKLFSLSETSI-REIDLADYHQQHQNLWLTDNRQLEVLPNGIWNMISEQLWIGWSP 882

Query: 271  RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
              ESLP       +LTSL +  C +   +P  + NL++L  L +  T I+ LP  + +L 
Sbjct: 883  LIESLPEISEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSETGIKSLPSSIQELR 942

Query: 331  LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-S 389
             L  +EL+ C  LE I +SI KL  + +  +S C  +   PE+P            P+  
Sbjct: 943  QLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELP------------PNLK 990

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
             L +++C  L++LPS+ C    L ++    C +L++ +P E 
Sbjct: 991  ELDVSRCKSLQALPSNTCKLLYLNTIHFEGCPQLDQAIPAEF 1032



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 156/380 (41%), Gaps = 65/380 (17%)

Query: 150 SLPTSIHSKYLKRLVLRGCS-----------NLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
           SLP   + ++L  L++R               L NL  +  C+  +      + I ++ S
Sbjct: 659 SLPAKFYPQHLVHLIIRRSPIRRCWEGYDQPQLVNLIVLDLCYCANI-----IAIPDISS 713

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE 258
           S+    NI ELL++ CK L  +   +  L  L ++ I  C NL+                
Sbjct: 714 SL----NIEELLLFGCKSLVEVPFHVQYLTKLVTLDISHCENLK---------------- 753

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
                      P P  L S       + +LE+  CP  +         + L    + GT+
Sbjct: 754 -----------PLPPKLDSKLLKHVRMKNLEVTCCPEIDS--------RELEEFDLSGTS 794

Query: 319 IRELPEGLGQLALLSKLEL--KNCSELEYISS--SIFKLKSVESIEISNCSNLKGFPEIP 374
           + ELP  +  +     L L  KN ++   I++   +F L      EI      +    + 
Sbjct: 795 LGELPSAIYNIKQNGVLHLHGKNITKFPGITTILKLFSLSETSIREIDLADYHQQHQNLW 854

Query: 375 FCN-----IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
             +     +  +GI  + S  L +     +ESLP       +LTSL +  C+ L  +P  
Sbjct: 855 LTDNRQLEVLPNGIWNMISEQLWIGWSPLIESLPEISEPMNTLTSLHVYCCRSLTSIPTS 914

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           + NL +L  L +  TGI+ +P S+ +L  L  ++L+ C S ES+P+ ++    L +  + 
Sbjct: 915 ISNLRSLGSLCLSETGIKSLPSSIQELRQLHMIELRYCESLESIPNSIHKLSKLVTFSMS 974

Query: 489 DCKNFMRLPDEIGNLEYLKV 508
            C+  + LP+   NL+ L V
Sbjct: 975 GCEIIISLPELPPNLKELDV 994



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 92/427 (21%), Positives = 188/427 (44%), Gaps = 34/427 (7%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q    +L  L++  C N   +PD   +L     L+    ++ E+P  +  L  L  L++ 
Sbjct: 688  QPQLVNLIVLDLCYCANIIAIPDISSSLNIEELLLFGCKSLVEVPFHVQYLTKLVTLDIS 747

Query: 339  NCSELE----YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
            +C  L+     + S + K   ++++E++ C  +    E+   ++ G+ +  +PS++  + 
Sbjct: 748  HCENLKPLPPKLDSKLLKHVRMKNLEVTCCPEIDS-RELEEFDLSGTSLGELPSAIYNIK 806

Query: 395  KCSKLESLPSSLCMFKSLTS-LEIIDCKKLERLPDELGNLEALEE--LRVEGTGIREVPK 451
            +   L     ++  F  +T+ L++    +      +L +     +     +   +  +P 
Sbjct: 807  QNGVLHLHGKNITKFPGITTILKLFSLSETSIREIDLADYHQQHQNLWLTDNRQLEVLPN 866

Query: 452  SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
             +  +   +L +      ESLP       +LTSL +  C++   +P  I NL  L  L +
Sbjct: 867  GIWNMISEQLWIGWSPLIESLPEISEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCL 926

Query: 512  KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
              T I+ +P S+ +L  L  + L    +L+ IP S+++LS LV+  +S    +  +PE L
Sbjct: 927  SETGIKSLPSSIQELRQLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPE-L 985

Query: 570  DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL--SVDLRNCLKLDPNELSEII 627
             P  +LK LD+            +S   ++PS    L    ++    C +LD    +E +
Sbjct: 986  PP--NLKELDV---------SRCKSL-QALPSNTCKLLYLNTIHFEGCPQLDQAIPAEFV 1033

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG----STISLKTP---QPTGYNKLM 680
             +  +  S++      + +   G+E+P+WF ++S      ST+ ++ P       +  + 
Sbjct: 1034 ANFLVHASLSPSH--DRQVRCSGSELPEWFSYRSMEDEDCSTVKVELPLANDSPDHPMIK 1091

Query: 681  GFAFCVV 687
            G AF  V
Sbjct: 1092 GIAFGCV 1098


>gi|42569093|ref|NP_179297.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251486|gb|AEC06580.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1355

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 179/722 (24%), Positives = 305/722 (42%), Gaps = 148/722 (20%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGS-----KNKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
           N +  + P  F  M  LR LK   S     +      +L+ +P  ELR   W  +PL++L
Sbjct: 371 NLKFFVKPDAFKSMHNLRFLKIYSSNPGKHQRIRFREALQSLP-NELRLLHWEDYPLQSL 429

Query: 60  NILHWE--NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
              H++  +LV L MP SK+ +LW   +NL  LK + L +S+ L ++ +L  ++N+E   
Sbjct: 430 P-QHFDPTHLVELNMPYSKLQKLWGGTKNLEMLKMVRLSHSQDLVEIEELIKSKNIE--- 485

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
                                V+DL  C  + S P + H ++L+ + L GC         
Sbjct: 486 ---------------------VIDLQGCTKIQSFPATRHLQHLRVINLSGC--------- 515

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
               ++ST       +EE     +   N+ EL + S   +  ++SSI             
Sbjct: 516 --VEIKST------QLEEFQGFPR---NLKELYL-SGTGIREVTSSI------------- 550

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
             +L  LE+                 L L  C R ++LP G+    SL  L +  C   +
Sbjct: 551 --HLSSLEV-----------------LDLSNCKRLQNLPMGKGNLASLIKLMLSGCSKLQ 591

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            + D   NL+    L + GT+IRE+P  +  L  L   + +NC +L+ +   +  L S+ 
Sbjct: 592 NIQDLPTNLK---ELYLAGTSIREVPSSICHLTQLVVFDAENCKKLQDLPMGMGNLISLT 648

Query: 358 SIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSV--------LKLNKCSKLESLPSS 405
            + +S CS L+  P++P      N+  + I+++PSS         L LN C +L+ L   
Sbjct: 649 MLILSGCSELRSIPDLPRNLRHLNLAETPIKKLPSSFEDLTKLVSLDLNHCERLQHL--Q 706

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELG-NLEALEELRVEGTG---IREVPKSLAQLALSKL 461
           +  F+S+  +++  C +L+ +   LG +L+ + +L  +GT    +   P     L L   
Sbjct: 707 MESFESVVRVDLSGCLELKYI---LGFSLQDITQLHEDGTDKVMLHGTPPCNVTLILETW 763

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR---E 518
           + +  +  E   S+ Y    L  +  +      +L   +    Y  V      A      
Sbjct: 764 RTRHVTPMEKSGSKFY----LKLMPFVTTPYRSKLQSSLVFRMYAMVSLFLSKAYLLDIH 819

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY 577
           +P+ +  L SL+ L LS NN   +PES+ Q  +L SL L +  NLE +PE   P  SL++
Sbjct: 820 IPQEICNLLSLKTLDLSGNNFGKLPESIKQFRNLESLILCHCKNLESLPEL--P-QSLEF 876

Query: 578 LDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK-------- 628
           L+      L  I    + FP                 NC ++ P+ + EI++        
Sbjct: 877 LNAHGCVCLKNIHRSFQQFPR-----------HCTFSNCFEISPDIVREILEARVAQMVI 925

Query: 629 DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK-TPQPTGYNKLMGFAFCVV 687
           D  +++ +    +   S   P    P +  H + GS++ ++ TP       L+GF   V 
Sbjct: 926 DHTLQKLIEAPAF---SFSVPAFRDPNYIFHLNRGSSVMIRLTP---SIETLLGFQISVA 979

Query: 688 VA 689
           VA
Sbjct: 980 VA 981


>gi|124359513|gb|ABN05946.1| TIR [Medicago truncatula]
          Length = 1230

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 170/337 (50%), Gaps = 24/337 (7%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL 59
           SKI  ++ ++  +F  M  LRLL      N   VH  EG+ +   +LRY  W  FPL++L
Sbjct: 653 SKI-GDVYLSSRSFESMINLRLLHIANECNN--VHLQEGLEWLSDKLRYLHWESFPLESL 709

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            +    +NLV L M  SK+ +LWD +Q L +L  I L  S+ L ++PDLS A NL+IL L
Sbjct: 710 PSTFCAQNLVQLSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILSL 769

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
            YC SL + H SI    KL  L L  CK + SL T IHSK L+RL L  CS+L     +T
Sbjct: 770 AYCVSLHQLHPSIFSAPKLRELCLKGCKKIESLVTDIHSKSLQRLDLTDCSSLVQFC-VT 828

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI--- 235
           S  ++  L L G  I E  S +   S +  L +  CK+L  +   +   + LES+ I   
Sbjct: 829 SEEMK-WLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRGLESLSILNL 887

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG--QCMFKSLTSLEIIDC 293
             C  +  L M S  +D  R  +     L L+ C   E+LP     C+   L SL +  C
Sbjct: 888 SGCTQINTLSM-SFILDSARFLKY----LNLRNCCNLETLPDNIQNCLM--LRSLHLDGC 940

Query: 294 PNFE---RLPDELGNLQALNRLIIDGTAI-RELPEGL 326
            N     +LP  L  L A+N   +D  +I RE+ E +
Sbjct: 941 INLNSLPKLPASLEELSAINCTYLDTNSIQREMLENM 977



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 54/266 (20%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            S ++I+ P+  R P    NL+ L+  +    ++ +L   +     L +L LK C ++E 
Sbjct: 748 NSEDLIEIPDLSRAP----NLKILS--LAYCVSLHQLHPSIFSAPKLRELCLKGCKKIES 801

Query: 346 ISSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           + + I   KS++ +++++CS+L  F     E+ + ++ G+ I    S +L+ +K      
Sbjct: 802 LVTDIHS-KSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIHEFSSLMLRNSK------ 854

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGN---LEALEELRVEG-TGIREVPKSL---A 454
                     L  L++ DCKKL  +  +L N   LE+L  L + G T I  +  S    +
Sbjct: 855 ----------LDYLDLGDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDS 904

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
              L  L L+ C + E+LP  +     L SL +  C N   LP                 
Sbjct: 905 ARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLP----------------- 947

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQ 540
              ++P SL +LS++    L  N++Q
Sbjct: 948 ---KLPASLEELSAINCTYLDTNSIQ 970



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 35/264 (13%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKL 399
           S+L  +   I KL ++  I++ N  +L   P++           R P+  +L L  C  L
Sbjct: 726 SKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDL----------SRAPNLKILSLAYCVSL 775

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
             L  S+     L  L +  CKK+E L  ++ + ++L+ L +          SL Q  ++
Sbjct: 776 HQLHPSIFSAPKLRELCLKGCKKIESLVTDIHS-KSLQRLDLTDCS------SLVQFCVT 828

Query: 460 KLKLK----KCSSFESLPSRLYVSKSLTSLEIIDCK--NFM--RLPDEIGNLEYLKVLTI 511
             ++K    + ++     S +  +  L  L++ DCK  NF+  +L ++ G LE L +L +
Sbjct: 829 SEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDLGDCKKLNFVGKKLSNDRG-LESLSILNL 887

Query: 512 KG-TAIREVPES--LGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN----NNLE 563
            G T I  +  S  L     L++L L +  NL+ +P+++     L SL L      N+L 
Sbjct: 888 SGCTQINTLSMSFILDSARFLKYLNLRNCCNLETLPDNIQNCLMLRSLHLDGCINLNSLP 947

Query: 564 RIPERLDPLSSLKYLDLFENNLDR 587
           ++P  L+ LS++    L  N++ R
Sbjct: 948 KLPASLEELSAINCTYLDTNSIQR 971


>gi|13517474|gb|AAK28809.1|AF310962_1 resistance-like protein P3-B [Linum usitatissimum]
          Length = 1188

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 203/455 (44%), Gaps = 47/455 (10%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------PFTEL-------RYFEWHQ 53
            E+ +    F  M  L  LKF   + K   + L+ V      P+  L       R+ +W  
Sbjct: 580  EMYLKANAFEGMNSLTFLKFESPEIKYPRYRLKNVKTKIHLPYDGLNSLPEGLRWLQWDG 639

Query: 54   FPLKTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +P K+L    + ++LV L +  S + + W+  D   LV+L  +DL Y   L  +PD+S +
Sbjct: 640  YPSKSLPAKFYPQHLVHLIIRDSPIQRCWEGYDQPQLVNLIVLDLCYCANLIAIPDISSS 699

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
             N+E L L  C SL E    +QYL KL  LD+  C++L  LP  + SK LK + ++    
Sbjct: 700  LNIEELLLFGCKSLVEVPFHVQYLTKLVTLDISYCENLKPLPPKLDSKLLKHVRMKYL-E 758

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY------------SCKRLE 218
            +   P++ S  L     L G  + ELPS+I  +   G L ++            + KR  
Sbjct: 759  ITLCPEIDSRELEE-FDLSGTSLGELPSAIYNVKQNGVLYLHGKNITKFPPITTTLKRFT 817

Query: 219  NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
               +SI ++  L      +  NL   +     +         S  L +   P  ESLP  
Sbjct: 818  LNGTSIREIDHLADYH-QQHQNLWLTDNRQLEVLPNSIWNMVSGRLIIGLSPLIESLPEI 876

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
                 +LTSL +  C +   +P  + NL++L  L +  T I+ LP  + +L  L  +EL+
Sbjct: 877  SEPMNTLTSLRVCCCRSLTSIPTSISNLRSLGSLCLSKTGIKSLPSSIQELRQLHMIELR 936

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--FCNIDGSGIERIPSSVLKLNKC 396
             C  LE I +SI KL  + +  +S C  +   PE+P     +D SG             C
Sbjct: 937  YCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSG-------------C 983

Query: 397  SKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
              L++LPS+ C    L ++    C +L++ +P E 
Sbjct: 984  KSLQALPSNTCKLLYLNTIHFEGCPQLDQAIPAEF 1018



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 188/430 (43%), Gaps = 39/430 (9%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q    +L  L++  C N   +PD   +L     L+    ++ E+P  +  L  L  L++ 
Sbjct: 673  QPQLVNLIVLDLCYCANLIAIPDISSSLNIEELLLFGCKSLVEVPFHVQYLTKLVTLDIS 732

Query: 339  NCSELE----YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
             C  L+     + S + K   ++ +EI+ C  +    E+   ++ G+ +  +PS++  + 
Sbjct: 733  YCENLKPLPPKLDSKLLKHVRMKYLEITLCPEIDS-RELEEFDLSGTSLGELPSAIYNVK 791

Query: 395  KCSKLESLPSSLCMFKSLTS------LEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
            +   L     ++  F  +T+      L     ++++ L D     + L     +   +  
Sbjct: 792  QNGVLYLHGKNITKFPPITTTLKRFTLNGTSIREIDHLADYHQQHQNL--WLTDNRQLEV 849

Query: 449  VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            +P S+  +   +L +      ESLP       +LTSL +  C++   +P  I NL  L  
Sbjct: 850  LPNSIWNMVSGRLIIGLSPLIESLPEISEPMNTLTSLRVCCCRSLTSIPTSISNLRSLGS 909

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            L +  T I+ +P S+ +L  L  + L    +L+ IP S+++LS LV+  +S    +  +P
Sbjct: 910  LCLSKTGIKSLPSSIQELRQLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLP 969

Query: 567  ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL--SVDLRNCLKLDPNELS 624
            E L P  +LK LD+            +S   ++PS    L    ++    C +LD    +
Sbjct: 970  E-LPP--NLKELDV---------SGCKSL-QALPSNTCKLLYLNTIHFEGCPQLDQAIPA 1016

Query: 625  EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG----STISLKTP---QPTGYN 677
            E + +  +  S++      + +   G+E+P+WF ++S      ST+ ++ P       + 
Sbjct: 1017 EFVANFLVHASLSPS--YERQVRCSGSELPEWFSYRSMEDEDCSTVKVELPLANDSPDHP 1074

Query: 678  KLMGFAFCVV 687
             + G AF  V
Sbjct: 1075 TIKGIAFGCV 1084


>gi|215261578|gb|ACJ64858.1| disease resistance protein RPP1-like protein R4 [Arabidopsis
            thaliana]
          Length = 1363

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 186/397 (46%), Gaps = 54/397 (13%)

Query: 46   LRYFEWHQFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
            +R  +W+ +   +L    + E LV L M  SK+ +LW+  + L +LK +DL  S  L +L
Sbjct: 786  IRSLKWYSYQNMSLPCTFNPEFLVELDMSSSKLRKLWEGTKQLRNLKWMDLSDSIDLKEL 845

Query: 105  PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
            P+LS A NLE L+L  CSSL E  SSI+ L  L+ LDL  C SL  LP SI++  L  L 
Sbjct: 846  PNLSTATNLEELELRNCSSLMELPSSIEKLTSLQRLDLCDCSSLVKLPPSINANNLWELS 905

Query: 165  LRGCSNLKNLPKMTSCHLRSTLPLLGV-GIEELPSSIKCLSN--IGELLIYSCKRLENIS 221
            L  CS +  LP + +      L L     + ELP SI    N  + EL I  C  L  + 
Sbjct: 906  LINCSRVVELPAIENATNLWELNLQNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLP 965

Query: 222  SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
            SSI  +  LE   +  C NL  +E+PS     +    Q   EL ++ C + E+LP+    
Sbjct: 966  SSIGDMTNLEEFDLSNCSNL--VELPS-----SIGNLQNLCELIMRGCSKLEALPTN-IN 1017

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             KSL +L++ DC   +  P+   N   ++ L + GTAI+E+P                  
Sbjct: 1018 LKSLYTLDLTDCSQLKSFPEISTN---ISELWLKGTAIKEVP------------------ 1056

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV------- 390
                   SI     +   +IS   +LK FP     I    +  S I+ +P  V       
Sbjct: 1057 ------LSIMSWSPLVDFQISYFESLKEFPHALDIITGLWLSKSDIQEVPPWVKRMSRLR 1110

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
             L LN C+ L SLP    +  SL  L   +CK LERL
Sbjct: 1111 ELTLNNCNNLVSLPQ---LPDSLAYLYADNCKSLERL 1144



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 201/425 (47%), Gaps = 65/425 (15%)

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            +L NL+ ++  + D   ++ELP  L     L +LEL+NCS L  + SSI KL S++ +++
Sbjct: 827  QLRNLKWMD--LSDSIDLKELP-NLSTATNLEELELRNCSSLMELPSSIEKLTSLQRLDL 883

Query: 362  SNCSNLKGFPEIPFCN-------IDGSGIERIPS-------SVLKLNKCSKLESLPSSLC 407
             +CS+L   P     N       I+ S +  +P+         L L  CS L  LP S+ 
Sbjct: 884  CDCSSLVKLPPSINANNLWELSLINCSRVVELPAIENATNLWELNLQNCSSLIELPLSIG 943

Query: 408  MFKSL--TSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKL 463
              ++L    L I  C  L +LP  +G++  LEE  +   + + E+P S+  L  L +L +
Sbjct: 944  TARNLFLKELNISGCSSLVKLPSSIGDMTNLEEFDLSNCSNLVELPSSIGNLQNLCELIM 1003

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            + CS  E+LP+ + + KSL +L++ DC      P+   N+  L    +KGTAI+EVP   
Sbjct: 1004 RGCSKLEALPTNINL-KSLYTLDLTDCSQLKSFPEISTNISEL---WLKGTAIKEVP--- 1056

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQ----LSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
              LS + W  L D  +    ESL +    L  +  L LS ++++ +P  +  +S L+ L 
Sbjct: 1057 --LSIMSWSPLVDFQISYF-ESLKEFPHALDIITGLWLSKSDIQEVPPWVKRMSRLRELT 1113

Query: 580  LFE-NNLDRIPEYLRSFPTSIPSE----------FTSLRLSVDLRNCLKLDPNELSEIIK 628
            L   NNL  +P+   S                  F +  +S+    C KL+  E  ++I 
Sbjct: 1114 LNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPEISLYFPKCFKLN-QEARDLIM 1172

Query: 629  DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFAF 684
                +Q V            PG ++P  F H++T G ++ +K   +P PT     + F  
Sbjct: 1173 HTSTRQCV----------MLPGTQVPACFNHRATSGDSLKIKLKESPLPTT----LRFKA 1218

Query: 685  CVVVA 689
            C+++ 
Sbjct: 1219 CIMLV 1223



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 166/369 (44%), Gaps = 78/369 (21%)

Query: 162  RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            R +  G   L+NL  M             + ++ELP+ +   +N+ EL + +C  L  + 
Sbjct: 819  RKLWEGTKQLRNLKWMDLSD--------SIDLKELPN-LSTATNLEELELRNCSSLMELP 869

Query: 222  SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
            SSI KL  L+ + +  C +L  L  PS N +          EL L  C R   LP+ +  
Sbjct: 870  SSIEKLTSLQRLDLCDCSSLVKLP-PSINANNLW-------ELSLINCSRVVELPAIENA 921

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
              +L  L + +C +   LP  +G  + L                      L +L +  CS
Sbjct: 922  -TNLWELNLQNCSSLIELPLSIGTARNL---------------------FLKELNISGCS 959

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLE 400
             L  + SSI  + ++E  ++SNCSNL   P         S I  + +   L +  CSKLE
Sbjct: 960  SLVKLPSSIGDMTNLEEFDLSNCSNLVELP---------SSIGNLQNLCELIMRGCSKLE 1010

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK 460
            +LP+++ + KSL +L++ DC +L+  P+   N+    EL ++GT I+EVP S+  ++ S 
Sbjct: 1011 ALPTNINL-KSLYTLDLTDCSQLKSFPEISTNIS---ELWLKGTAIKEVPLSI--MSWSP 1064

Query: 461  LKLKKCSSFESLP---------SRLYVSKS--------------LTSLEIIDCKNFMRLP 497
            L   + S FESL          + L++SKS              L  L + +C N + LP
Sbjct: 1065 LVDFQISYFESLKEFPHALDIITGLWLSKSDIQEVPPWVKRMSRLRELTLNNCNNLVSLP 1124

Query: 498  DEIGNLEYL 506
                +L YL
Sbjct: 1125 QLPDSLAYL 1133



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 5/113 (4%)

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           E L   +Y S  + SL+    +N M LP    N E+L  L +  + +R++ E   QL +L
Sbjct: 774 ERLQDLIYQSPRIRSLKWYSYQN-MSLPCTF-NPEFLVELDMSSSKLRKLWEGTKQLRNL 831

Query: 530 EWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           +W+ LSD+ +L+ +P +L+  ++L  L+L N ++L  +P  ++ L+SL+ LDL
Sbjct: 832 KWMDLSDSIDLKELP-NLSTATNLEELELRNCSSLMELPSSIEKLTSLQRLDL 883


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 202/431 (46%), Gaps = 46/431 (10%)

Query: 4   INSEIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKT 58
           I   I I+   F +M  L+ L+F    G +   +++  +G+     +LR   W ++PL  
Sbjct: 567 IEGVINISERAFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTC 626

Query: 59  LN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L    + E LV + M  S + +LWD  + + +LK +DL +   L +LPD S A NL+ L 
Sbjct: 627 LPPKFNPEFLVKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELR 686

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
           L  C SL E  SSI     L  LDL  C SL  LP+SI +   LK+L L  CS+L     
Sbjct: 687 LINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLV---- 742

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
                             +LPSS   ++++ EL +  C  L  I SSI  +  L+ +   
Sbjct: 743 ------------------KLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYAD 784

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C +L  +++PS   + T  K     EL L  C      PS       L  L +  C + 
Sbjct: 785 GCSSL--VQLPSSIGNNTNLK-----ELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSL 837

Query: 297 ERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +LP  +GN+  L  L + D +++ ELP  +     L  L L  CS L  + SSI+ + +
Sbjct: 838 VKLP-SIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITN 896

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++S+ ++ CS+LK  P +    I+           L L KCS L  LPSS+    +L+ L
Sbjct: 897 LQSLYLNGCSSLKELPSLVENAINLQS--------LSLMKCSSLVELPSSIWRISNLSYL 948

Query: 416 EIIDCKKLERL 426
           ++ +C  L  L
Sbjct: 949 DVSNCSSLLEL 959



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 230/516 (44%), Gaps = 84/516 (16%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L +I+C +   LP  +GN   L  L +ID +++ +LP  +G L  L KL L  CS 
Sbjct: 681  NLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSS 740

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            L  + SS   + S++ + +S CS+L    EIP    +   ++++ +     + CS L  L
Sbjct: 741  LVKLPSSFGNVTSLKELNLSGCSSLL---EIPSSIGNIVNLKKVYA-----DGCSSLVQL 792

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKL 461
            PSS+    +L  L +++C  L   P  + NL  LE+L + G   + ++P     + L  L
Sbjct: 793  PSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSL 852

Query: 462  KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVP 520
             L  CSS   LP  +  + +L +L +  C N + LP  I N+  L+ L + G ++++E+P
Sbjct: 853  YLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELP 912

Query: 521  ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD- 579
                         L +N + +   SL + SSLV L          P  +  +S+L YLD 
Sbjct: 913  S------------LVENAINLQSLSLMKCSSLVEL----------PSSIWRISNLSYLDV 950

Query: 580  -----LFENNLDR---IPEYL-------RSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
                 L E NL     +P+ L        S    +   F + ++ ++  NC KL+     
Sbjct: 951  SNCSSLLELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVLNFANCFKLNQEARD 1010

Query: 625  EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
             II           +T   ++   PG ++P +F +++TG ++++K  Q      L  F  
Sbjct: 1011 LII-----------QTSACRNAILPGEKVPAYFTYRATGDSLTVKLNQKYLLQSLR-FKA 1058

Query: 685  CVVVACSVSECCRHESVEDDRKCNLF--DVVCDRRSEGYDS-YTSSYLGKISHVESDHVF 741
            C+++            VE   K   +  ++V  R  +G+   YT S     SH++   + 
Sbjct: 1059 CLLL------------VEGQNKWPNWGMNLVTSREPDGHIVLYTPS-----SHLQGPLLM 1101

Query: 742  LGSSIFAGENSCKRSDEFF--FHIDRSCCEVKKCGI 775
                 F  E     S EF   F  DR  C V +CG+
Sbjct: 1102 ENLYTFEFE-LVVTSSEFVLEFRADRYKCAVSECGL 1136



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 46/344 (13%)

Query: 158 KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKR 216
           + LK + L  C NLK LP  ++      L L+  + + ELPSSI   +N+ EL +  C  
Sbjct: 657 RNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSS 716

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L  + SSI  L  L+ + ++RC +L                                 LP
Sbjct: 717 LVKLPSSIGNLTNLKKLFLNRCSSLV-------------------------------KLP 745

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           S      SL  L +  C +   +P  +GN+  L ++  DG +++ +LP  +G    L +L
Sbjct: 746 SSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKEL 805

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
            L NCS L    SS+  L  +E + +S C +L   P I   N+       I    L L+ 
Sbjct: 806 HLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIG--NV-------INLQSLYLSD 856

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLA 454
           CS L  LP ++    +L +L +  C  L  LP  + N+  L+ L + G + ++E+P SL 
Sbjct: 857 CSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELP-SLV 915

Query: 455 QLA--LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           + A  L  L L KCSS   LPS ++   +L+ L++ +C + + L
Sbjct: 916 ENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLEL 959



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC 145
           NL  L+ ++L     L KLP +    NL+ L L  CSSL E   +I+    L+ L LD C
Sbjct: 822 NLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGC 881

Query: 146 KSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLS 204
            +L  LP+SI +   L+ L L GCS+LK                      ELPS ++   
Sbjct: 882 SNLLELPSSIWNITNLQSLYLNGCSSLK----------------------ELPSLVENAI 919

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           N+  L +  C  L  + SSI+++  L  + +  C +L  L + S
Sbjct: 920 NLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLELNLVS 963



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             ++E+P       L +L+L  C S   LPS +  + +L  L++IDC + ++LP  IGNL
Sbjct: 668 VNLKELPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNL 727

Query: 504 EYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-N 560
             LK L + + +++ ++P S G ++SL+ L LS  ++L  IP S+  + +L  +     +
Sbjct: 728 TNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCS 787

Query: 561 NLERIPERLDPLSSLKYLDLF 581
           +L ++P  +   ++LK L L 
Sbjct: 788 SLVQLPSSIGNNTNLKELHLL 808


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 183/385 (47%), Gaps = 50/385 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N   FSKM +L+LL          +H+L    G  +    LR+  W  +P K+L  
Sbjct: 498 EADWNLEAFSKMCKLKLL---------YIHNLRLSLGPIYLPNALRFLNWSWYPSKSLPP 548

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+ ++   +LK IDL YS  LT+ PD +   NLE L L  
Sbjct: 549 CFQSDKLTELSLVHSNIDHLWNGIKYSRNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEG 608

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L E H S   L KL +L+L  CKS+ SLP+ +H ++L+   + GCS LK +P+    
Sbjct: 609 CTNLVEVHQSTGLLQKLRILNLRNCKSIKSLPSEVHMEFLETFDVSGCSKLKMIPEFVGQ 668

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPS                  +E++S S+ +L  L  I I   P
Sbjct: 669 MKRLSRLSLSGTAVEKLPS------------------IEHLSESLVELD-LSGIVIREQP 709

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+         ++    S  L  +K P P   L +    F SLT+L++ DC   E 
Sbjct: 710 YSLFLK---------QNLIVSSFGLFPRKSPHPLIPLLASLKHFSSLTTLKLNDCNLCEG 760

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP+++G+L +L  L + G     LP  +  L+ L  + ++NC  L+ +         V 
Sbjct: 761 ELPNDIGSLSSLEWLYLGGNNFSTLPASIHLLSKLRYINVENCKRLQQLPE--LSANDVL 818

Query: 358 SIEISNCSNLKGFPEIP-FCNIDGS 381
           S    NC++L+ FP+ P  C I  S
Sbjct: 819 S-RTDNCTSLQLFPDPPDLCRITTS 842



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 215/480 (44%), Gaps = 78/480 (16%)

Query: 353  LKSVE---SIEISNCSNLKGFPEIPFCNIDG-SGIERIPSS--------VLKLNKCSKLE 400
            LKS++   SI ++   +  G P +    ++G + +  +  S        +L L  C  ++
Sbjct: 578  LKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVEVHQSTGLLQKLRILNLRNCKSIK 637

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP------KSLA 454
            SLPS + M + L + ++  C KL+ +P+ +G ++ L  L + GT + ++P      +SL 
Sbjct: 638  SLPSEVHM-EFLETFDVSGCSKLKMIPEFVGQMKRLSRLSLSGTAVEKLPSIEHLSESLV 696

Query: 455  QLALSKLKLKKCSSFESLPSRLYVSKSL--TSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
            +L LS + +++       P  L++ ++L  +S  +   K+   L   + +L++   LT  
Sbjct: 697  ELDLSGIVIRE------QPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLASLKHFSSLTTL 750

Query: 513  -----GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
                      E+P  +G LSSLEWL L  NN   +P S++ LS L  + + N   L+++P
Sbjct: 751  KLNDCNLCEGELPNDIGSLSSLEWLYLGGNNFSTLPASIHLLSKLRYINVENCKRLQQLP 810

Query: 567  ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR--NCLKLDPNE-- 622
            E    LS+   L   +N        L+ FP   P +   +  S  L   NCL +  N+  
Sbjct: 811  E----LSANDVLSRTDNCTS-----LQLFPD--PPDLCRITTSFWLNCVNCLSMVGNQDA 859

Query: 623  ---LSEIIKDGWMKQSVNGETYITKSM-------------YFPGNEIPKWFRHQSTGSTI 666
               L  ++K  W++  V     +T  M               PG+EIP+WF +QS G  +
Sbjct: 860  SYFLYSVLKR-WIEIQVLTRCDMTVHMQETHRRPLESLKVVIPGSEIPEWFNNQSVGDRV 918

Query: 667  SLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTS 726
            + K P    Y+KL+GFA C ++    +     E       C++      R    Y    +
Sbjct: 919  TEKLPSDECYSKLIGFAVCALIVPQDNPSAVPEESNLPDTCHIV-----RLWNNYGFDIA 973

Query: 727  SYLGKISHVESDHVFLGSSI--FAGENSCKRSDEFFFHIDRSC-----CEVKKCGIHFVH 779
            S    +    SDH++L   +  F    +C    EF F I R+       +VKKCG+  ++
Sbjct: 974  SVGIPVKQFVSDHLYLLVLLNPFRKPENCLEF-EFSFEIRRAVGNNRGMKVKKCGVRALY 1032


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 143/297 (48%), Gaps = 42/297 (14%)

Query: 7   EIQINPYTFSKMTELRLLKFCG------------------------------SKNKCMVH 36
           E+  +   F+KM  LRLLK C                               ++NK  ++
Sbjct: 368 ELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLY 427

Query: 37  SLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDL 95
                    LR   WH +PLK+  +  H E LV L M  S++ QLW+  +    LK I L
Sbjct: 428 EDSKFLSNNLRDLYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKL 487

Query: 96  KYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
            +S+ LTK PD S   NL  L L  C+SL E H SI  L KL  L+L+ CK L S  +SI
Sbjct: 488 SHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI 547

Query: 156 HSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYS 213
           H + L+ L L GCS LK  P++   ++ S + L   G GI ELPSSI CL+ +  L + +
Sbjct: 548 HMESLQILTLSGCSKLKKFPEIQE-NMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKN 606

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLE--------MPSCNIDGTRSKEQPSS 262
           CK+L ++  S  +L  L ++ +  C  L+ L         +   N DG+  +E P S
Sbjct: 607 CKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPS 663



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 20/234 (8%)

Query: 256 SKEQPSSELKLKKC-PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
           S   P   ++L  C  R + L  G+  F+ L S+++    +  + PD  G +  L RLI+
Sbjct: 452 SNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSG-VPNLRRLIL 510

Query: 315 DG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
            G T++ E+   +G L  L  L L+ C +L+  SSSI  ++S++ + +S CS LK FPEI
Sbjct: 511 KGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEI 569

Query: 374 PF-------CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEII 418
                      +DGSGI  +PSS+        L L  C KL SLP S C   SL +L + 
Sbjct: 570 QENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLC 629

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFES 471
            C +L+ LPD+LG+L+ L EL  +G+GI+EVP S+  L  L KL L  C   +S
Sbjct: 630 GCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDS 683



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 14/197 (7%)

Query: 352 KLKSVE---SIEISNCSNLKGFPEIPFCNIDG--SGIERIPSS-------VLKLNKCSKL 399
           KLKS++   S  ++   +  G P +    + G  S +E  PS         L L  C KL
Sbjct: 481 KLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKL 540

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-AL 458
           +S  SS+ M +SL  L +  C KL++ P+   N+E+L EL ++G+GI E+P S+  L  L
Sbjct: 541 KSFSSSIHM-ESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGL 599

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
             L LK C    SLP       SL +L +  C     LPD++G+L+ L  L   G+ I+E
Sbjct: 600 VFLNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQE 659

Query: 519 VPESLGQLSSLEWLVLS 535
           VP S+  L++L+ L L+
Sbjct: 660 VPPSITLLTNLQKLSLA 676



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 7/208 (3%)

Query: 387 PSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++LN C S+L+ L      F+ L S+++   + L + PD  G +  L  L ++G T
Sbjct: 456 PEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSG-VPNLRRLILKGCT 514

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + EV  S+  L  L  L L+ C   +S  S +++ +SL  L +  C    + P+   N+
Sbjct: 515 SLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHM-ESLQILTLSGCSKLKKFPEIQENM 573

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NN 561
           E L  L + G+ I E+P S+G L+ L +L L +   L  +P+S  +L+SL +L L   + 
Sbjct: 574 ESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGCSE 633

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIP 589
           L+ +P+ L  L  L  L+   + +  +P
Sbjct: 634 LKELPDDLGSLQCLAELNADGSGIQEVP 661


>gi|15242937|ref|NP_197661.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178243|dbj|BAB11675.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332005681|gb|AED93064.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/246 (39%), Positives = 136/246 (55%), Gaps = 11/246 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF---CGSKNK-CMVHSLEGVPF---TELRYFEWHQ 53
           MS+I  E+ I+   F +M  LR L+F    G ++K   +H  EG       +L+   W  
Sbjct: 540 MSEI-EELHIHKRAFKRMPNLRFLRFYKKLGKQSKEARLHLQEGFDKFFPPKLKLLSWDD 598

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           +P++ + +  H   LV L+M  SK+ +LW  VQ L  L+ + L  SK L ++PDLSLA N
Sbjct: 599 YPMRRMPSNFHAGYLVVLRMQHSKLEKLWQGVQPLTCLREMQLWGSKKLKEIPDLSLATN 658

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           LE L L  CSSL E  SSI+ LNKL  L +  C+ L  LPT I+ K L RL L  CS LK
Sbjct: 659 LETLYLNDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPTDINLKSLYRLDLGRCSRLK 718

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           + P ++S    S L L    IEE+P  I+  S +  L +  CK+L+ IS +I KL+ LE 
Sbjct: 719 SFPDISSN--ISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEM 776

Query: 233 IRIHRC 238
           +    C
Sbjct: 777 LDFSNC 782



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 162/373 (43%), Gaps = 53/373 (14%)

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           + R+P    +   L  LR++ + + ++ + +  L  L +++L      + +P  L ++ +
Sbjct: 601 MRRMPSNF-HAGYLVVLRMQHSKLEKLWQGVQPLTCLREMQLWGSKKLKEIPD-LSLATN 658

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
           L +L + DC + + LP  I NL  L  L +KG    E+  +   L SL  L L   + L+
Sbjct: 659 LETLYLNDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPTDINLKSLYRLDLGRCSRLK 718

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP 600
             P+  + +S L    L+   +E +P  +   S LK L +      R  + L+    +I 
Sbjct: 719 SFPDISSNISELY---LNRTAIEEVPWWIQKFSRLKRLRM------RECKKLKCISPNI- 768

Query: 601 SEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
           S+   L + +D  NC+     E            ++  +  + K + FPG ++P +F +Q
Sbjct: 769 SKLKHLEM-LDFSNCIATTEEE------------ALVQQQSVLKYLIFPGGQVPLYFTYQ 815

Query: 661 STGST--ISLKTPQPTGYNKLMGFAFCVVV----------ACSVSECCRHESVEDDRKCN 708
           +TGS+  I L   Q +   +L+GF  CVV+             +  CCR       ++ N
Sbjct: 816 ATGSSLAIPLSLHQSSLSQQLLGFRACVVLDAESMSSELYVIDIKVCCRLSG----KRSN 871

Query: 709 LFDVVCDRRSEGYDSYTSSYLGKIS---HVESDHVFLGSSIFAGENSCKRSDEFFFHIDR 765
           LFD   D R   +     S+L        +  D+V L     A  N+ K   EF F    
Sbjct: 872 LFD-SADCRDAFFTPQMDSHLVIFDCCFPLNQDNVRL-----AELNNDKVVTEFHF-TSI 924

Query: 766 SCCEVKKCGIHFV 778
           S C++   G+ F+
Sbjct: 925 SRCKITGVGVRFL 937



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 12/172 (6%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +E+L   ++ L+ + E+ ++  K+L+ I         LE++ ++ C +L  +E+PS    
Sbjct: 623 LEKLWQGVQPLTCLREMQLWGSKKLKEIPDLSLATN-LETLYLNDCSSL--VELPS---- 675

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
            +        +L +K C + E LP+     KSL  L++  C   +  PD   N+   + L
Sbjct: 676 -SIKNLNKLWDLGMKGCEKLELLPT-DINLKSLYRLDLGRCSRLKSFPDISSNI---SEL 730

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            ++ TAI E+P  + + + L +L ++ C +L+ IS +I KLK +E ++ SNC
Sbjct: 731 YLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEMLDFSNC 782



 Score = 42.7 bits (99), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           D   +R +P        L  L +++ S+LE +   +  L  +  +++     LK  P++ 
Sbjct: 597 DDYPMRRMPSNF-HAGYLVVLRMQH-SKLEKLWQGVQPLTCLREMQLWGSKKLKEIPDLS 654

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
                 + +E      L LN CS L  LPSS+     L  L +  C+KLE LP ++ NL+
Sbjct: 655 L----ATNLE-----TLYLNDCSSLVELPSSIKNLNKLWDLGMKGCEKLELLPTDI-NLK 704

Query: 435 AL---------------------EELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESL 472
           +L                      EL +  T I EVP  + + + L +L++++C   + +
Sbjct: 705 SLYRLDLGRCSRLKSFPDISSNISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCI 764

Query: 473 PSRLYVSKSLTSLEIIDC 490
              +   K L  L+  +C
Sbjct: 765 SPNISKLKHLEMLDFSNC 782


>gi|399920218|gb|AFP55565.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1024

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 184/376 (48%), Gaps = 52/376 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   NP  FSKM  L+LL          +H+L    G  F    LR  +W  +P K+L  
Sbjct: 499 EADWNPKAFSKMCNLKLL---------YIHNLRLSLGPKFLPDALRILKWSGYPSKSLPP 549

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+ +++LV+LK IDL YS+ L + P+ +   NLE L L  
Sbjct: 550 DFQPDELTELSLVHSNIDHLWNGIKSLVNLKSIDLSYSRNLRRTPNFTGIPNLEKLVLEG 609

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L E H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 610 CTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKIIPEFVGQ 669

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI                 E++S S+ +L  L  I I   P
Sbjct: 670 MKRLSKLYLNGTAVEKLPSSI-----------------EHLSESLVELD-LSGIVIREQP 711

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+         ++    S  L  +K P P   L +    F SL  L++ DC   E 
Sbjct: 712 YSLFLK---------QNLVVSSFGLFPRKSPHPLIPLLASLKHFSSLMQLKLNDCNLCEG 762

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS--SSIFKLKS 355
            +P+++G+L +L RL + G     LP  +  L+ L  + ++NC  L+ +   S+I  L  
Sbjct: 763 DIPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVENCKRLQQLPELSAIGVLSR 822

Query: 356 VESIEISNCSNLKGFP 371
            +     NC++L+ FP
Sbjct: 823 TD-----NCTSLQLFP 833



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 71/384 (18%)

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK------GFPEIPFC 376
           P+ L +L+L+        S ++++ + I  L +++SI++S   NL+      G P +   
Sbjct: 553 PDELTELSLVH-------SNIDHLWNGIKSLVNLKSIDLSYSRNLRRTPNFTGIPNLEKL 605

Query: 377 NIDGSG--IERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
            ++G    +E  PS        +     C  ++SLPS + M + L + ++  C KL+ +P
Sbjct: 606 VLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSEVNM-EFLETFDVSGCSKLKIIP 664

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS-SFESLPSRLYVSKSLTSLE 486
           + +G ++ L +L + GT + ++P S+  L+ S ++L          P  L++ ++L    
Sbjct: 665 EFVGQMKRLSKLYLNGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNL---- 720

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL 539
                                V++  G   R+ P        SL   SSL  L L+D NL
Sbjct: 721 ---------------------VVSSFGLFPRKSPHPLIPLLASLKHFSSLMQLKLNDCNL 759

Query: 540 --QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPEYLRSF 595
               IP  +  LSSL  L+L  NN   +P  +  LS L+Y+++ EN   L ++PE     
Sbjct: 760 CEGDIPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINV-ENCKRLQQLPELSAIG 818

Query: 596 PTSIPSEFTSLRL-SVDLR----NCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYF-- 648
             S     TSL+L    LR    NCL +  N+ +  +    +K+ +  +    + + F  
Sbjct: 819 VLSRTDNCTSLQLFPTGLRQNCVNCLSMVGNQDASYLLYSVLKRWIEIQETHRRPLEFLW 878

Query: 649 ---PGNEIPKWFRHQSTGSTISLK 669
              PG+EIP+WF +QS G  ++ K
Sbjct: 879 FVIPGSEIPEWFNNQSVGDRVTEK 902


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 204/431 (47%), Gaps = 46/431 (10%)

Query: 4   INSEIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKT 58
           I   I I+   F +M  L+ L+F    G +   +++  +G+     +LR   W ++PL  
Sbjct: 567 IEGVINISERAFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTC 626

Query: 59  LN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L    + E LV + M  S + +LWD  + + +LK +DL +   L +LPD S A NL+ L 
Sbjct: 627 LPPKFNPEFLVKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELR 686

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
           L  C SL E  SSI     L  LDL  C SL  LP+SI +   LK+L L  CS+L     
Sbjct: 687 LINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLV---- 742

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
                             +LPSS   ++++ EL +  C  L  I SSI  +  L+ +   
Sbjct: 743 ------------------KLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYAD 784

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C +L  +++PS   + T  K     EL L  C      PS       L  L +  C + 
Sbjct: 785 GCSSL--VQLPSSIGNNTNLK-----ELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSL 837

Query: 297 ERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +LP  +GN+  L  L + D +++ ELP  +     L  L L  CS L  + SSI+ + +
Sbjct: 838 VKLP-SIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITN 896

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++S+ ++ CS+LK  P +    ++ +    I    L L KCS L  LPSS+    +L+ L
Sbjct: 897 LQSLYLNGCSSLKELPSL----VENA----INLQSLSLMKCSSLVELPSSIWRISNLSYL 948

Query: 416 EIIDCKKLERL 426
           ++ +C  L  L
Sbjct: 949 DVSNCSSLLEL 959



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 60/408 (14%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L +I+C +   LP  +GN   L  L +ID +++ +LP  +G L  L KL L  CS 
Sbjct: 681  NLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSS 740

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            L  + SS   + S++ + +S CS+L    EIP    +   ++++ +     + CS L  L
Sbjct: 741  LVKLPSSFGNVTSLKELNLSGCSSLL---EIPSSIGNIVNLKKVYA-----DGCSSLVQL 792

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKL 461
            PSS+    +L  L +++C  L   P  + NL  LE+L + G   + ++P     + L  L
Sbjct: 793  PSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSL 852

Query: 462  KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVP 520
             L  CSS   LP  +  + +L +L +  C N + LP  I N+  L+ L + G ++++E+P
Sbjct: 853  YLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELP 912

Query: 521  ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD- 579
                         L +N + +   SL + SSLV L          P  +  +S+L YLD 
Sbjct: 913  S------------LVENAINLQSLSLMKCSSLVEL----------PSSIWRISNLSYLDV 950

Query: 580  -----LFENNLDR---IPEYL-------RSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
                 L E NL     +P+ L        S    +   F + ++ ++  NC KL+     
Sbjct: 951  SNCSSLLELNLVSHPVVPDSLILDAGDCESLVQRLDCFFQNPKIVLNFANCFKLNQEARD 1010

Query: 625  EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
             II           +T   ++   PG ++P +F +++TG ++++K  Q
Sbjct: 1011 LII-----------QTSACRNAILPGEKVPAYFTYRATGDSLTVKLNQ 1047



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 46/344 (13%)

Query: 158 KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKR 216
           + LK + L  C NLK LP  ++      L L+  + + ELPSSI   +N+ EL +  C  
Sbjct: 657 RNLKWMDLSFCVNLKELPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSS 716

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L  + SSI  L  L+ + ++RC +L                                 LP
Sbjct: 717 LVKLPSSIGNLTNLKKLFLNRCSSLV-------------------------------KLP 745

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           S      SL  L +  C +   +P  +GN+  L ++  DG +++ +LP  +G    L +L
Sbjct: 746 SSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKEL 805

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
            L NCS L    SS+  L  +E + +S C +L   P I   N+       I    L L+ 
Sbjct: 806 HLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIG--NV-------INLQSLYLSD 856

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLA 454
           CS L  LP ++    +L +L +  C  L  LP  + N+  L+ L + G + ++E+P SL 
Sbjct: 857 CSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELP-SLV 915

Query: 455 QLA--LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           + A  L  L L KCSS   LPS ++   +L+ L++ +C + + L
Sbjct: 916 ENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLEL 959



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC 145
           NL  L+ ++L     L KLP +    NL+ L L  CSSL E   +I+    L+ L LD C
Sbjct: 822 NLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGC 881

Query: 146 KSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLS 204
            +L  LP+SI +   L+ L L GCS+LK                      ELPS ++   
Sbjct: 882 SNLLELPSSIWNITNLQSLYLNGCSSLK----------------------ELPSLVENAI 919

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           N+  L +  C  L  + SSI+++  L  + +  C +L  L + S
Sbjct: 920 NLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLELNLVS 963



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             ++E+P       L +L+L  C S   LPS +  + +L  L++IDC + ++LP  IGNL
Sbjct: 668 VNLKELPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNL 727

Query: 504 EYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-N 560
             LK L + + +++ ++P S G ++SL+ L LS  ++L  IP S+  + +L  +     +
Sbjct: 728 TNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCS 787

Query: 561 NLERIPERLDPLSSLKYLDLF 581
           +L ++P  +   ++LK L L 
Sbjct: 788 SLVQLPSSIGNNTNLKELHLL 808


>gi|297791233|ref|XP_002863501.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309336|gb|EFH39760.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1064

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 54/435 (12%)

Query: 9   QINPYTFSKMTELRLLKF-CG-SKNK---CMVHSLEGVPFTELRYFEWHQFPLKTLNILH 63
           +++P  F +   LRLLK  C  S+N+   C+   L  +P  ELR   W  +PL++L    
Sbjct: 367 ELSPTIFDRTYRLRLLKLHCAISENRGTICLPRGLYSLP-DELRLLHWESYPLRSL---- 421

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
                                +NL  LK+I L +S+ L K+P LS A NLE +DL  C+S
Sbjct: 422 -------------------PRENLEKLKKIILSHSRQLIKIPRLSKALNLEHIDLEGCTS 462

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L +  SSI +L+KL  L+L  C  L +LP  IH + L+ L L GCS+LK +    S +L+
Sbjct: 463 LVKVSSSIHHLDKLVFLNLKDCSRLRTLPVMIHLESLEVLNLSGCSDLKEIQDF-SPNLK 521

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             L L G  I ELPSSI+ L+ +  L + +C +L+ +   +  L+ + ++++  C NL+ 
Sbjct: 522 E-LYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKAMVTLKLSGCSNLK- 579

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
             +P+ +    R  +  ++E+ ++       +P       S+    +  C   ++L  +L
Sbjct: 580 -SLPNLDAIYLRGTQHLNTEITME-------VPKSLVHHSSIHQSRLDHCETLDKLIPDL 631

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV---ESIE 360
               A  +  +  +  R++     +    S ++L+  S   +++S ++ L S+    +  
Sbjct: 632 CLKNAAIQKSLAASVYRQIAGIRQENWQWSTIKLQPLSIFHFLASRLYALVSLCLSNACL 691

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSL 412
           +     + G P +   ++ G+G  +IP S+        L+L  C  L+SLP    + +SL
Sbjct: 692 VDLPKEICGLPSVNILDLGGNGFSKIPESIKLLPKLHSLRLRHCKNLKSLPE---LPQSL 748

Query: 413 TSLEIIDCKKLERLP 427
             L +  C  ++ +P
Sbjct: 749 VLLNVHGCVSMKSVP 763



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 116/495 (23%), Positives = 198/495 (40%), Gaps = 91/495 (18%)

Query: 71  KMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
           K PG K ++LWD  ++ N+++          +   + DL+   +  I D  Y   L + H
Sbjct: 327 KEPG-KRSRLWDANEIANVLTSNSGTEAVEGIFLDMSDLTCELSPTIFDRTYRLRLLKLH 385

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPKMTSCHLRSTL 186
            +I        L     + L SLP  +   + +   LR     NL+ L K+   H R  +
Sbjct: 386 CAISENRGTICLP----RGLYSLPDELRLLHWESYPLRSLPRENLEKLKKIILSHSRQLI 441

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
                   ++P   K L N+  + +  C  L  +SSSI           H    L FL  
Sbjct: 442 --------KIPRLSKAL-NLEHIDLEGCTSLVKVSSSI-----------HHLDKLVFL-- 479

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
                              LK C R  +LP      +SL  L +  C + + + D   NL
Sbjct: 480 ------------------NLKDCSRLRTLPV-MIHLESLEVLNLSGCSDLKEIQDFSPNL 520

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +    L + GTAIRELP  + +L  L  L+L NC++L+ +   +  LK++ ++++S CSN
Sbjct: 521 K---ELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKAMVTLKLSGCSN 577

Query: 367 LKGFPEIPFCNIDGSG------IERIPSSVL--------KLNKCSKLESLPSSLCM---- 408
           LK  P +    + G+          +P S++        +L+ C  L+ L   LC+    
Sbjct: 578 LKSLPNLDAIYLRGTQHLNTEITMEVPKSLVHHSSIHQSRLDHCETLDKLIPDLCLKNAA 637

Query: 409 ---------FKSLTSLE-------IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
                    ++ +  +         I  + L         L AL  L +    + ++PK 
Sbjct: 638 IQKSLAASVYRQIAGIRQENWQWSTIKLQPLSIFHFLASRLYALVSLCLSNACLVDLPKE 697

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           +  L    +     + F  +P  + +   L SL +  CKN   LP+     + L +L + 
Sbjct: 698 ICGLPSVNILDLGGNGFSKIPESIKLLPKLHSLRLRHCKNLKSLPELP---QSLVLLNVH 754

Query: 513 G-TAIREVPESLGQL 526
           G  +++ VP S  +L
Sbjct: 755 GCVSMKSVPWSFERL 769



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 153/373 (41%), Gaps = 91/373 (24%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LPDEL  L        +   +R LP     L  L K+ L +  +L  I   + K  ++E 
Sbjct: 404 LPDELRLLHW------ESYPLRSLPRE--NLEKLKKIILSHSRQLIKIPR-LSKALNLEH 454

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEI 417
           I++  C++L             S I  +   V L L  CS+L +LP  +   +SL  L +
Sbjct: 455 IDLEGCTSLVKV---------SSSIHHLDKLVFLNLKDCSRLRTLPV-MIHLESLEVLNL 504

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
             C  L+ + D   NL+   EL + GT IRE+P S+ +L  L  L L  C+  + LP  +
Sbjct: 505 SGCSDLKEIQDFSPNLK---ELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGM 561

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA------IREVPESLGQLSSL- 529
              K++ +L++  C N   LP+       L  + ++GT         EVP+SL   SS+ 
Sbjct: 562 SNLKAMVTLKLSGCSNLKSLPN-------LDAIYLRGTQHLNTEITMEVPKSLVHHSSIH 614

Query: 530 --------------------------------------------EWLVLSDNNLQIIPES 545
                                                       +W  +    L I    
Sbjct: 615 QSRLDHCETLDKLIPDLCLKNAAIQKSLAASVYRQIAGIRQENWQWSTIKLQPLSIFHFL 674

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
            ++L +LVSL LSN  L  +P+ +  L S+  LDL  N   +IPE ++  P     +  S
Sbjct: 675 ASRLYALVSLCLSNACLVDLPKEICGLPSVNILDLGGNGFSKIPESIKLLP-----KLHS 729

Query: 606 LRLSVDLRNCLKL 618
           LR    LR+C  L
Sbjct: 730 LR----LRHCKNL 738


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 189/395 (47%), Gaps = 56/395 (14%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIE 384
            L +L L+ C+ L  +  +I  L+S+ +  +S CS LK  PEI          ++DG+ IE
Sbjct: 662  LEQLILQGCTSLSAVPDNI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIE 720

Query: 385  RIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNL 433
             +P+S+        L L  C  L SLP  +C   SLTSL+I++   C  L  LP+ LG+L
Sbjct: 721  ELPTSINHLNGLTLLNLRDCKSLLSLPDVICT--SLTSLQILNVSGCSNLNELPENLGSL 778

Query: 434  EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID--- 489
            E L+EL    T I+ +P S   L  L+ L L++C +  +LP    +  +LTSL+I++   
Sbjct: 779  ECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLPD--VICTNLTSLQILNLSG 836

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
            C N   LP+ +G+LE L+ L   GTAI +VPES+ QLS LE LV          +  ++L
Sbjct: 837  CSNLNELPENLGSLESLQELYASGTAISQVPESISQLSQLEELVF---------DGCSKL 887

Query: 550  SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
             SL  L  S   +  +     PL  L+  D   N +   P     F       F + +  
Sbjct: 888  QSLPRLPFS---IRAVSVHNCPL--LQGAD--SNKITVWPSAAAGF------SFLNRQRH 934

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
             D+     L    L       + + ++  +        +  NEIP W   +ST STI++ 
Sbjct: 935  DDIAQAFWLPDKHLLWPFYQTFFEGAIRRDERFEYG--YRSNEIPAWLSRRSTESTITIP 992

Query: 670  TPQPT-GYNKLMGFAFCVVVACSVSECCRHESVED 703
             P    G  K +  A C +  C  ++  +H+S+ED
Sbjct: 993  LPHDVDGKTKWIKLALCFI--CEAAQ--KHDSLED 1023



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 179/380 (47%), Gaps = 60/380 (15%)

Query: 15  FSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMP 73
           FS M  LRLLK    +    +  L      EL   EWH+ PLK+L +    + LV L   
Sbjct: 566 FSNMDNLRLLKIYNVEFSGCLEYLSD----ELSLLEWHKCPLKSLPSSFEPDKLVEL--- 618

Query: 74  GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
                          +L   +++      + P     + L +L+L  C  L +T      
Sbjct: 619 ---------------NLSESEIEELWEEIERP----LEKLAVLNLSDCQKLIKT-PDFDK 658

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGV 191
           +  LE L L  C SL+++P +I+ + L   +L GCS LK LP++      LR  L + G 
Sbjct: 659 VPNLEQLILQGCTSLSAVPDNINLRSLTNFILSGCSKLKKLPEIGEDMKQLRK-LHVDGT 717

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSI-FKLQFLESIRIHRCPNLQFLEMPS-- 248
            IEELP+SI  L+ +  L +  CK L ++   I   L  L+ + +  C NL   E+P   
Sbjct: 718 AIEELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGCSNLN--ELPENL 775

Query: 249 ----C--NIDGTRSKEQ--PSSE--------LKLKKCPRPESLPSGQCMFKSLTSLEIID 292
               C   +  +R+  Q  P+S         L L++C    +LP   C   +LTSL+I++
Sbjct: 776 GSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLPDVICT--NLTSLQILN 833

Query: 293 ---CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
              C N   LP+ LG+L++L  L   GTAI ++PE + QL+ L +L    CS+L+ +   
Sbjct: 834 LSGCSNLNELPENLGSLESLQELYASGTAISQVPESISQLSQLEELVFDGCSKLQSLPRL 893

Query: 350 IFKLKSVESIEISNCSNLKG 369
            F   S+ ++ + NC  L+G
Sbjct: 894 PF---SIRAVSVHNCPLLQG 910


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 182/377 (48%), Gaps = 48/377 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
           E   N   FSKM +L+LL          +H+L    G  +    LR+ +W  +P  +L  
Sbjct: 559 EADWNLEAFSKMCKLKLL---------YIHNLRLSLGPKYLPNALRFLKWSWYPSISLPP 609

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                 L  L +P S +  LW  ++ L +LK IDL YS  LT+ PD +    LE L L  
Sbjct: 610 GFQPAELAELSLPYSNIDHLWIGIKYLSNLKSIDLSYSTNLTRTPDFTGIPYLEKLILEG 669

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL + H SI  L +L++ +   CKS+ SLP  +  ++L+   + GCS LK +P+    
Sbjct: 670 CISLVKIHPSIASLKRLKIWNFRNCKSIKSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQ 729

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPS                  +E++S S+ +L  L  I I   P
Sbjct: 730 TKRLSRLCLGGTAVEKLPS------------------IEHLSESLVELD-LSGIVIREQP 770

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES-LPSGQCMFKSLTSLEIIDCPNFE- 297
             +FL+    N+  +      S  L  +K P P + L +    F SLT L++ DC   E 
Sbjct: 771 YSRFLKQ---NLIAS------SLGLFPRKSPHPLTPLLASLKHFSSLTELKLNDCNLCEG 821

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP+++G+L +L RL + G     LP  +  L+ L  + ++NC  L+ +       +   
Sbjct: 822 ELPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVENCKRLQQLPEP--SARGYL 879

Query: 358 SIEISNCSNLKGFPEIP 374
           S+  +NC++L+ FP++P
Sbjct: 880 SVNTNNCTSLQVFPDLP 896



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 193/410 (47%), Gaps = 62/410 (15%)

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP G  Q A L++L L   S ++++   I  L +++SI++S  +NL   P       D +
Sbjct: 607 LPPGF-QPAELAELSLPY-SNIDHLWIGIKYLSNLKSIDLSYSTNLTRTP-------DFT 657

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           GI  +    L L  C  L  +  S+   K L      +CK ++ LP E+ ++E LE   V
Sbjct: 658 GIPYLEK--LILEGCISLVKIHPSIASLKRLKIWNFRNCKSIKSLPGEV-DMEFLETFDV 714

Query: 442 EG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLE----IIDCKNFMR 495
            G + ++ +P+ + Q   LS+L L   ++ E LPS  ++S+SL  L+    +I  + + R
Sbjct: 715 SGCSKLKMIPEFVGQTKRLSRLCLGG-TAVEKLPSIEHLSESLVELDLSGIVIREQPYSR 773

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL--QIIPESL 546
              +  NL    + +  G   R+ P        SL   SSL  L L+D NL    +P  +
Sbjct: 774 FLKQ--NL----IASSLGLFPRKSPHPLTPLLASLKHFSSLTELKLNDCNLCEGELPNDI 827

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPE-YLRSFPTSIPSEF 603
             LSSL  L+L  NN   +P  +  LS L+Y+++ EN   L ++PE   R + +   +  
Sbjct: 828 GSLSSLRRLELRGNNFVSLPASIHLLSKLRYINV-ENCKRLQQLPEPSARGYLSVNTNNC 886

Query: 604 TSLRLSVDL-------------RNCLKLDPNE---------LSEIIKDGWM-KQSVNGET 640
           TSL++  DL              NCL    N+         L  +++ G M         
Sbjct: 887 TSLQVFPDLPGLCRLLAFRLCCSNCLSTVGNQDASYFIYSVLKRLVEVGMMVHMPETPRC 946

Query: 641 YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPT-GYNKLMGFAFCVVVA 689
           +    +  PG+EIP+WF +QS G +++ K P     Y+K +GFA C ++ 
Sbjct: 947 FPLPELLIPGSEIPEWFNNQSVGDSVTEKLPSDACNYSKWIGFAVCALIG 996


>gi|297804202|ref|XP_002869985.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315821|gb|EFH46244.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1122

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 135/239 (56%), Gaps = 7/239 (2%)

Query: 9    QINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILH 63
            +++P  F KM  LRLLKF    S+N+C ++  +G+     ELR   W  +PL+ L +  +
Sbjct: 871  ELSPTVFGKMYNLRLLKFYCSTSENECKLNLPQGLDTLPDELRLLHWENYPLEYLPHKFN 930

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             ENLV + MP S + +LW+  +NL  LK I L +S+ LT +  LS A NLE +DL  C+S
Sbjct: 931  PENLVEIHMPYSNMEKLWEGKKNLEKLKNIKLSHSRKLTDILMLSEALNLEHIDLEGCTS 990

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
            L +  +SI++L KL  L++  C  L +LP+ ++   LKRL   GCS L  +         
Sbjct: 991  LIDVSTSIRHLGKLVSLNMKDCSRLQTLPSMVNLTSLKRLNFSGCSELDEIQDFAPN--L 1048

Query: 184  STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L G  I E+P SI+ L+ +  L + +C+RL+ +   I  L+ +  +++  C +LQ
Sbjct: 1049 EELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSLQ 1107



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 240  NLQFLEMPSCN--IDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
            NL+ +++  C   ID + S         L +K C R ++LPS      SL  L    C  
Sbjct: 979  NLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKDCSRLQTLPS-MVNLTSLKRLNFSGCSE 1037

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             + + D   NL+    L + GTAIRE+P  +  L  L  L+L+NC  L+ +   I  LKS
Sbjct: 1038 LDEIQDFAPNLE---ELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKS 1094

Query: 356  VESIEISNCSNLKGFPEI 373
            +  +++S C++L+ FP++
Sbjct: 1095 IVELKLSGCTSLQSFPKL 1112



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 10/164 (6%)

Query: 410  KSLTSLEIIDCKKLERLPDELGNLEAL--EELRVEG-TGIREVPKSLAQLA-LSKLKLKK 465
            K+L  L+ I      +L D L   EAL  E + +EG T + +V  S+  L  L  L +K 
Sbjct: 952  KNLEKLKNIKLSHSRKLTDILMLSEALNLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKD 1011

Query: 466  CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
            CS  ++LPS + ++ SL  L    C     + D   NLE L    + GTAIRE+P S+  
Sbjct: 1012 CSRLQTLPSMVNLT-SLKRLNFSGCSELDEIQDFAPNLEEL---YLAGTAIREIPLSIEN 1067

Query: 526  LSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
            L+ L  L L +   LQ +P  ++ L S+V LKLS   +L+  P+
Sbjct: 1068 LTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSLQSFPK 1111



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)

Query: 60   NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
            +I H   LVSL M      Q    + NL SLKR++      L ++ D   A NLE L L 
Sbjct: 997  SIRHLGKLVSLNMKDCSRLQTLPSMVNLTSLKRLNFSGCSELDEIQDF--APNLEELYLA 1054

Query: 120  YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
              +++ E   SI+ L +L  LDL+ C+ L  LP  I S K +  L L GC++L++ PK+ 
Sbjct: 1055 -GTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSLQSFPKLK 1113

Query: 179  S 179
            +
Sbjct: 1114 A 1114



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 355  SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN--KCSKLESLPSSLCMFKSL 412
            ++E I++  C++L          ID S   R    ++ LN   CS+L++LPS +    SL
Sbjct: 979  NLEHIDLEGCTSL----------IDVSTSIRHLGKLVSLNMKDCSRLQTLPS-MVNLTSL 1027

Query: 413  TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFES 471
              L    C +L+ + D   NLE   EL + GT IRE+P S+  L  L  L L+ C   + 
Sbjct: 1028 KRLNFSGCSELDEIQDFAPNLE---ELYLAGTAIREIPLSIENLTELVTLDLENCRRLQK 1084

Query: 472  LPSRLYVSKSLTSLEIIDCKNFMRLP 497
            LP  +   KS+  L++  C +    P
Sbjct: 1085 LPMGISSLKSIVELKLSGCTSLQSFP 1110



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 25/177 (14%)

Query: 283  KSLTSLEIIDCPNFERLPDELGNLQALNRLIID---GTAIRELPEGLGQLALLSKLELKN 339
            K+L  L+ I   +  +L D L   +ALN   ID    T++ ++   +  L  L  L +K+
Sbjct: 952  KNLEKLKNIKLSHSRKLTDILMLSEALNLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKD 1011

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIPSSVLKLNK 395
            CS L+ + S +  L S++ +  S CS L       P +    + G+ I  IP S+  L +
Sbjct: 1012 CSRLQTLPSMV-NLTSLKRLNFSGCSELDEIQDFAPNLEELYLAGTAIREIPLSIENLTE 1070

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK 451
                            L +L++ +C++L++LP  + +L+++ EL++ G T ++  PK
Sbjct: 1071 ----------------LVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSLQSFPK 1111


>gi|224143578|ref|XP_002336058.1| predicted protein [Populus trichocarpa]
 gi|222869691|gb|EEF06822.1| predicted protein [Populus trichocarpa]
          Length = 722

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 174/351 (49%), Gaps = 34/351 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF----CGSKNKCMVH-SLEGVPF--TELRYFEWHQ 53
           MS+++ +I +    F+ M  LR +KF        NK  +H    G+ +   +LRY  W  
Sbjct: 197 MSRLSRQIHLKSDAFAMMDGLRFIKFFFGHLSQDNKDKMHLPPTGLEYLSNKLRYLHWDG 256

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           FP K+L ++   E LV L +  SKV +LW  VQ++ ++++  L YS  LT+LPDLS A+N
Sbjct: 257 FPSKSLPHVFCAEYLVELNLSRSKVEKLWTRVQDVGNVQKFVLSYSPYLTELPDLSKARN 316

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  L L  C SLTE   S+QYL+KLE LDL+ C +L S P  + SK LK L +  C ++ 
Sbjct: 317 LVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPM-LDSKVLKVLSISRCLDMT 375

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKC-LSNIGELLIYSCKRLENIS--SSIFKLQF 229
             P ++      +L L    I+E+P SI   L N+G   ++ C ++      S   K  +
Sbjct: 376 KCPTISQN--MKSLYLEETSIKEVPQSITSKLENLG---LHGCSKITKFPEISGDVKTLY 430

Query: 230 LESIRIHRCP-NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           L    I   P ++QFL    C +D             +  C + ES P      KSL  L
Sbjct: 431 LSGTAIKEVPSSIQFLTR-LCVLD-------------MSGCSKLESFPEIAVPMKSLVDL 476

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA-LLSKLELK 338
            +      + +P     + +L  L +DGT I ELP  +  +  L++ + LK
Sbjct: 477 NLSKT-GIKEIPSSFKQMISLRSLGLDGTPIEELPLSIKDMKPLIAAMHLK 526



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 202/476 (42%), Gaps = 106/476 (22%)

Query: 369 GFPE--IP--FC-------NIDGSGIERIPSSVLKLNKCSK--------LESLPSSLCMF 409
           GFP   +P  FC       N+  S +E++ + V  +    K        L  LP  L   
Sbjct: 256 GFPSKSLPHVFCAEYLVELNLSRSKVEKLWTRVQDVGNVQKFVLSYSPYLTELPD-LSKA 314

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP----KSLAQLALSK-LKL 463
           ++L SL ++DC  L  +P  L  L+ LEEL +     +R  P    K L  L++S+ L +
Sbjct: 315 RNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDSKVLKVLSISRCLDM 374

Query: 464 KKCSSFESLPSRLY--------VSKSLTS----LEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            KC +       LY        V +S+TS    L +  C    + P+  G++   K L +
Sbjct: 375 TKCPTISQNMKSLYLEETSIKEVPQSITSKLENLGLHGCSKITKFPEISGDV---KTLYL 431

Query: 512 KGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
            GTAI+EVP S+  L+ L  L +S  + L+  PE    + SLV L LS   ++ IP    
Sbjct: 432 SGTAIKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFK 491

Query: 571 PLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG 630
            + SL+ L      LD  P  +   P SI                      ++  +I   
Sbjct: 492 QMISLRSL-----GLDGTP--IEELPLSI---------------------KDMKPLIAAM 523

Query: 631 WMK-QSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
            +K QS +   Y    M  PG+EIP+WF  +  GS+++++   PT  ++L G AFC+V  
Sbjct: 524 HLKIQSGDKIPYDRIQMVLPGSEIPEWFSDKGIGSSLTIQL--PTNCHQLKGIAFCLVFL 581

Query: 690 CSVS------ECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTS----SYLGKISHVESDH 739
             +       E   H  V     C++     +   +  + + S    S    +   +SDH
Sbjct: 582 LPLPSHEMLYEFDDHPEVRVYFDCHVKSKKGEHDGDDEEVFVSKKSYSIFNFLKTCDSDH 641

Query: 740 VFLGSSI--------FAG-ENSCKRSDEFFFHID----------RSCCEVKKCGIH 776
           +FL   +        ++G E +CK    F+  +D          R  CE+K CG++
Sbjct: 642 MFLHYELELVNHFRKYSGNEVTCK----FYHEVDNGSTKVGHEIRKPCELKSCGVY 693



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 52/281 (18%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++GN+Q    ++     + ELP+ L +   L  L L +C  L  +  S+  L  +E +++
Sbjct: 290 DVGNVQKF--VLSYSPYLTELPD-LSKARNLVSLRLVDCPSLTEVPFSLQYLDKLEELDL 346

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC--------------SKLESLPSSLC 407
           + C NL+ FP +    +    I R     L + KC              + ++ +P S+ 
Sbjct: 347 NFCYNLRSFPMLDSKVLKVLSISR----CLDMTKCPTISQNMKSLYLEETSIKEVPQSIT 402

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
               L +L +  C K+ + P+  G+++ L    + GT I+EVP S+  L  L  L +  C
Sbjct: 403 --SKLENLGLHGCSKITKFPEISGDVKTL---YLSGTAIKEVPSSIQFLTRLCVLDMSGC 457

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
           S  ES P      KSL  L                         +  T I+E+P S  Q+
Sbjct: 458 SKLESFPEIAVPMKSLVDL------------------------NLSKTGIKEIPSSFKQM 493

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLV-SLKLSNNNLERIP 566
            SL  L L    ++ +P S+  +  L+ ++ L   + ++IP
Sbjct: 494 ISLRSLGLDGTPIEELPLSIKDMKPLIAAMHLKIQSGDKIP 534



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 37/195 (18%)

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP----EGLGQLALLSKLEL 337
           ++L SL ++DCP+   +P  L  L  L  L ++    +R  P    + L  L++   L++
Sbjct: 315 RNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDSKVLKVLSISRCLDM 374

Query: 338 KNCSELEYISSSIF----KLKSV--------ESIEISNCSNLKGFPEI----PFCNIDGS 381
             C  +     S++     +K V        E++ +  CS +  FPEI        + G+
Sbjct: 375 TKCPTISQNMKSLYLEETSIKEVPQSITSKLENLGLHGCSKITKFPEISGDVKTLYLSGT 434

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            I+ +PSS+  L +          LC+      L++  C KLE  P+    +++L +L +
Sbjct: 435 AIKEVPSSIQFLTR----------LCV------LDMSGCSKLESFPEIAVPMKSLVDLNL 478

Query: 442 EGTGIREVPKSLAQL 456
             TGI+E+P S  Q+
Sbjct: 479 SKTGIKEIPSSFKQM 493


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 140/253 (55%), Gaps = 17/253 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF---------TELRYFEWHQFPLK 57
           ++Q+NP  F+KM++L  L F  +K  C     +G  +          ELRY  W  +PL+
Sbjct: 581 QLQLNPQVFAKMSKLYFLDFY-NKGSCSCLREQGGLYLPQGLESLSNELRYLRWTHYPLE 639

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L +    ENLV L +P S+V +LW  V +LV+++ + L  S  L +LPDLS A NL+++
Sbjct: 640 SLPSKFSAENLVELNLPYSRVKKLWQAVPDLVNMRILILHSSTQLKELPDLSKATNLKVM 699

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           DL +C  LT  H S+  L KLE L L  C SL SL ++IH   L+ L L GC +LK    
Sbjct: 700 DLRFCVGLTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNIHLDSLRYLSLYGCMSLKYFSV 759

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL-LIYSCKRLENISSSIFKLQFLESIRI 235
            +   +R  L L    I++LPSSI   S + +L L Y+   +EN+ +SI  L  L  + +
Sbjct: 760 TSKNMVRLNLEL--TSIKQLPSSIGLQSKLEKLRLAYTY--IENLPTSIKHLTKLRHLDV 815

Query: 236 HRCPNLQFL-EMP 247
             C  L+ L E+P
Sbjct: 816 RHCRELRTLPELP 828



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 155/379 (40%), Gaps = 58/379 (15%)

Query: 399 LESLPSSLCMFKSLTSLEI--IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           LESLPS     ++L  L +     KKL +   +L N+  L  +    T ++E+P      
Sbjct: 638 LESLPSKFSA-ENLVELNLPYSRVKKLWQAVPDLVNMRIL--ILHSSTQLKELPDLSKAT 694

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
            L  + L+ C    S+   ++  K L  L +  C +   L   I +L+ L+ L++ G   
Sbjct: 695 NLKVMDLRFCVGLTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNI-HLDSLRYLSLYGCM- 752

Query: 517 REVPESLGQLS----SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
                SL   S    ++  L L   +++ +P S+   S L  L+L+   +E +P  +  L
Sbjct: 753 -----SLKYFSVTSKNMVRLNLELTSIKQLPSSIGLQSKLEKLRLAYTYIENLPTSIKHL 807

Query: 573 SSLKYLDLFE----NNLDRIPEYLRS-------------FPTSIPSEFTSLRLSVDLRNC 615
           + L++LD+        L  +P  L +             FP++   +    +  V   NC
Sbjct: 808 TKLRHLDVRHCRELRTLPELPPSLETLDARGCVSLETVMFPSTAGEQLKENKKRVAFWNC 867

Query: 616 LKLDPNELSEI--------IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH---QSTGS 664
           LKLD + L  I        +K      S  G+ +    +Y PG+++P+W  H   Q    
Sbjct: 868 LKLDEHSLKAIELNAQINMMKFAHQHLSTFGDAHQGTYVY-PGSKVPEWLVHKTIQRDYV 926

Query: 665 TISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSY 724
           TI L        +  +GF F  VV    +E              + +       EG  S 
Sbjct: 927 TIDLSFVLAPHSSDHLGFIFGFVVPEVPNEGL------------VLEFKISTGGEGEGSN 974

Query: 725 TSSYLGKISH-VESDHVFL 742
            + YL +  H ++SDHV+L
Sbjct: 975 INVYLDRPRHGIKSDHVYL 993


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 257/566 (45%), Gaps = 96/566 (16%)

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP----KMT 178
           LT   + I  L  LEVLDL     LTS+P  I     L  L L G + L ++P    ++T
Sbjct: 18  LTSVPAEIGQLTSLEVLDL-YNNQLTSVPAEIGQLTSLTELYLFG-NQLTSVPAEIGQLT 75

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI----- 233
           S    + L L G  +  +P+ +  L+++ EL +++  RL ++ + I +L  LE +     
Sbjct: 76  SL---TGLDLSGNQLTSVPAEVGQLTSLRELHLWN-NRLTSVPAEIGQLTSLEELCLDDN 131

Query: 234 RIHRCPN--LQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFK 283
           R+   P    Q   +    + G +    P+         EL LK   +  S+P+      
Sbjct: 132 RLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSN-QLTSVPAEIGQLA 190

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL  L + +      +P E+G L +L  L ++G  +  +P  +GQL  L +L L++ ++L
Sbjct: 191 SLEKLNL-NGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRD-NQL 248

Query: 344 EYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
             + + I +L S+E +            EI   ++L+G        +D + +  +P+ + 
Sbjct: 249 TSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGL------ELDDNQLTSVPAEIW 302

Query: 392 KLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           +L          ++L S+P+ +    SLT L  +   +L  +P E+G L  L+EL +   
Sbjct: 303 QLTSLRVLYLDDNQLTSVPAEIGQLTSLTEL-YLSGNQLTSVPAEIGRLTELKELGLRDN 361

Query: 445 GIREVPKSLAQL------------------------ALSKLKLKKCSSFESLPSRLYVSK 480
            +  VP+ + QL                        +L +L L++ +   S+P+ ++   
Sbjct: 362 QLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLER-NELTSVPAEIWQLT 420

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
           SLT L  + C     +P EIG L  L  L + GT +  VP  +GQL+SL  L L  N L 
Sbjct: 421 SLTEL-YLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLT 479

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP 600
            +P  + QL+SL  L L+   L  +P  +  L+ LK LDL +N L  +PE +        
Sbjct: 480 SLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIW------- 532

Query: 601 SEFTSLRLSVDLRNCLKLDPNELSEI 626
            + TSLR        L LD N+L+ +
Sbjct: 533 -QLTSLR-------VLYLDDNQLTSV 550



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 261/546 (47%), Gaps = 57/546 (10%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           +L  L + G+++T +  ++  L SL  +DL  ++L +   ++    +L  L L + + LT
Sbjct: 53  SLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHL-WNNRLT 111

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS 184
              + I  L  LE L LD  + LTS+P  I     L+RL L G        ++TS     
Sbjct: 112 SVPAEIGQLTSLEELCLDDNR-LTSVPAEIGQLTSLERLYLGGN-------QLTSV---- 159

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                       P+ I  L+++ EL + S  +L ++ + I +L  LE + ++     Q  
Sbjct: 160 ------------PAEIGRLTSLEELNLKS-NQLTSVPAEIGQLASLEKLNLNGN---QLT 203

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            +P+     T  KE   +  +L       S+P+       L  L + D      +P E+G
Sbjct: 204 SVPAEIGQLTSLKELDLNGNQLT------SVPADIGQLTDLKELGLRDN-QLTSVPAEIG 256

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            L +L +L + G  +  +P  +GQL  L  LEL + ++L  + + I++L S+  + + + 
Sbjct: 257 QLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDD-NQLTSVPAEIWQLTSLRVLYLDD- 314

Query: 365 SNLKGFP-EIPFCN------IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFK 410
           + L   P EI          + G+ +  +P+ + +L +        ++L S+P  +    
Sbjct: 315 NQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLT 374

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           SL  L  +D   L+ LP E+G L +LEEL +E   +  VP  + QL +L++L L  C+  
Sbjct: 375 SLRVL-YLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLG-CNQL 432

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            S+P+ +    SLT L +   K    +P EIG L  L+VL + G  +  +P  +GQL+SL
Sbjct: 433 TSVPAEIGQLTSLTKLYLSGTK-LTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASL 491

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             L L+   L  +P  + QL+ L  L L +N L  +PE +  L+SL+ L L +N L  +P
Sbjct: 492 RELYLNGKQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVP 551

Query: 590 EYLRSF 595
             +R  
Sbjct: 552 AAIREL 557



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 58/366 (15%)

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI----------- 359
            L +DG  +  +P  +GQL  L  L+L N ++L  + + I +L S+  +           
Sbjct: 10  ELALDGNELTSVPAEIGQLTSLEVLDLYN-NQLTSVPAEIGQLTSLTELYLFGNQLTSVP 68

Query: 360 -EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKS 411
            EI   ++L G       ++ G+ +  +P+ V +L          ++L S+P+ +    S
Sbjct: 69  AEIGQLTSLTGL------DLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTS 122

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
           L  L  +D  +L  +P E+G L +LE L + G  +  VP  + +L +L +L L K +   
Sbjct: 123 LEEL-CLDDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNL-KSNQLT 180

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           S+P+ +    SL  L  ++      +P EIG L  LK L + G  +  VP  +GQL+ L+
Sbjct: 181 SVPAEIGQLASLEKLN-LNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLK 239

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L L DN L  +P  + QL+SL  L +  N L  +P  +  L+SL+ L+L +N L     
Sbjct: 240 ELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQL----- 294

Query: 591 YLRSFPTSIPSE---FTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY 647
                 TS+P+E    TSLR        L LD N+L+ +  +      +   T +T+ +Y
Sbjct: 295 ------TSVPAEIWQLTSLR-------VLYLDDNQLTSVPAE------IGQLTSLTE-LY 334

Query: 648 FPGNEI 653
             GN++
Sbjct: 335 LSGNQL 340



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 254/571 (44%), Gaps = 87/571 (15%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSL-EGVPFTELRYFEWHQFPLKTLNILHWENLVSL 70
           P    ++T L +L    ++   +   + +    TEL  F  +Q       I    +L  L
Sbjct: 22  PAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLF-GNQLTSVPAEIGQLTSLTGL 80

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKL---------LTKLPDLSLAQN--------- 112
            + G+++T +  +V  L SL+ + L  ++L         LT L +L L  N         
Sbjct: 81  DLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEI 140

Query: 113 -----LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLR 166
                LE L LG  + LT   + I  L  LE L+L +   LTS+P  I     L++L L 
Sbjct: 141 GQLTSLERLYLG-GNQLTSVPAEIGRLTSLEELNL-KSNQLTSVPAEIGQLASLEKLNLN 198

Query: 167 GCSNLKNLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
           G + L ++P    ++TS      L L G  +  +P+ I  L+++ EL +    +L ++ +
Sbjct: 199 G-NQLTSVPAEIGQLTSLK---ELDLNGNQLTSVPADIGQLTDLKELGLRD-NQLTSVPA 253

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPS-----CNIDGTRSKEQPSSELKLKKCPRPESLPS 277
            I +L  LE + +      Q   +P+      +++G    +      +L   P       
Sbjct: 254 EIGQLASLEKLYVGGN---QLTSVPAEIGQLTSLEGLELDDN-----QLTSVP------- 298

Query: 278 GQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                  LTSL ++  D      +P E+G L +L  L + G  +  +P  +G+L  L +L
Sbjct: 299 --AEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKEL 356

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-----FCNIDGSGIER----- 385
            L++ ++L  +   I++L S+  + + +  NL    E+P       +++  G+ER     
Sbjct: 357 GLRD-NQLTSVPEEIWQLTSLRVLYLDD--NL--LDELPAEIGQLTSLEELGLERNELTS 411

Query: 386 IPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           +P+ + +L         C++L S+P+ +    SLT L  +   KL  +P E+G L +L  
Sbjct: 412 VPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKL-YLSGTKLTSVPAEIGQLTSLRV 470

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           L + G  +  +P  + QLA L +L L       S+P+ +     L  L++ D K    +P
Sbjct: 471 LYLYGNQLTSLPAEIGQLASLRELYLN-GKQLTSVPAEIGQLTELKELDLRDNK-LTSVP 528

Query: 498 DEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
           +EI  L  L+VL +    +  VP ++ +L +
Sbjct: 529 EEIWQLTSLRVLYLDDNQLTSVPAAIRELKA 559


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 235/516 (45%), Gaps = 80/516 (15%)

Query: 10  INPYTFSKMTELRLLKFCGSK--NKCMVH---SLEGVPFTELRYFEWHQFPLKTL-NILH 63
           +NP  F KM  LR LK C SK  +   +H    L+ +P  ELR   W  FPL +L     
Sbjct: 505 LNPMAFEKMYNLRYLKICSSKPGSYSTIHLPKGLKSLP-DELRLLHWENFPLLSLPQGFD 563

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             NLV L M  SK+ +LW+  + L  LKRI L +S+ L  + +L  A+N+E++DL  C+ 
Sbjct: 564 PRNLVILNMCSSKLQRLWEGTKELEMLKRIKLCHSRKLVDIQELQNARNIEVIDLQGCTR 623

Query: 124 LTETHSSIQYLNKLEVLDLDRC---KSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           L E      + + L V++L  C   K    +P  I   YLK+  +R      ++P +T  
Sbjct: 624 L-ERFIDTGHFHHLRVINLSGCINIKVFPKVPPKIEELYLKQTAIR------SIPNVTLS 676

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF-KLQFLESIRIHRCP 239
              ++      G + L                    LE+ S SI   L+ L+ + + RC 
Sbjct: 677 SKDNSFSYDHGGHKFLD-------------------LEDSSESIMVYLEQLKVLDLSRCI 717

Query: 240 NLQFLEMPSCN-----IDGTRSKEQPS----SE---LKLKKCPRPESLPSGQCMFKSLTS 287
            L+ +++   N     + GT  +E PS    SE   L L+ C + + +P       SL  
Sbjct: 718 ELEDIQVIPNNLKKLYLGGTSIQELPSLVHLSELVVLDLENCKQLQKIPLRLSTLTSLAV 777

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L +  C   E + D L   + L  L + GTAI+E+P  +  L+ L  L+L+NC  L  + 
Sbjct: 778 LNLSGCSELEDIED-LNLPRNLEELYLAGTAIQEVPSSITYLSELVILDLQNCKRLRRLP 836

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
             I  LKS+ ++++     ++            +G+  + S+    N C + + LP    
Sbjct: 837 MEISNLKSLVTLKLPRLFTVE------------TGMSNLISA-FNENVCQRQDYLPQPRL 883

Query: 408 M------------FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
           +            F +L SL + +   L  +P+E+ +L  +  L +   G R++P+S+ Q
Sbjct: 884 LPSSRLLHGLVPRFYALVSLSLCNA-SLMHIPEEICSLATVTVLDLSRNGFRKIPESIKQ 942

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           L  L  L+L+ C +  SLP    + +SL  L +  C
Sbjct: 943 LCKLHSLRLRHCRNLRSLPE---LPQSLKILNVHGC 975



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 160/372 (43%), Gaps = 84/372 (22%)

Query: 264 LKLKKCPRPES-LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           + L+ C R E  + +G   F  L  + +  C N +  P     ++    L +  TAIR +
Sbjct: 616 IDLQGCTRLERFIDTGH--FHHLRVINLSGCINIKVFPKVPPKIE---ELYLKQTAIRSI 670

Query: 323 PEGLGQLALLSK-------------LELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
           P     + L SK             L+L++ SE     S +  L+ ++ +++S C  L+ 
Sbjct: 671 P----NVTLSSKDNSFSYDHGGHKFLDLEDSSE-----SIMVYLEQLKVLDLSRCIELED 721

Query: 370 FPEIPF----CNIDGSGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
              IP       + G+ I+ +PS        VL L  C +L+ +P  L    SL  L + 
Sbjct: 722 IQVIPNNLKKLYLGGTSIQELPSLVHLSELVVLDLENCKQLQKIPLRLSTLTSLAVLNLS 781

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
            C +LE + D L     LEEL + GT I+EVP S+  L+                     
Sbjct: 782 GCSELEDIED-LNLPRNLEELYLAGTAIQEVPSSITYLS--------------------- 819

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
              L  L++ +CK   RLP EI NL+ L  +T+K   +  V   +  L S      ++N 
Sbjct: 820 --ELVILDLQNCKRLRRLPMEISNLKSL--VTLKLPRLFTVETGMSNLIS----AFNENV 871

Query: 539 LQ---------IIPES------LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            Q         ++P S      + +  +LVSL L N +L  IPE +  L+++  LDL  N
Sbjct: 872 CQRQDYLPQPRLLPSSRLLHGLVPRFYALVSLSLCNASLMHIPEEICSLATVTVLDLSRN 931

Query: 584 NLDRIPEYLRSF 595
              +IPE ++  
Sbjct: 932 GFRKIPESIKQL 943


>gi|20198191|gb|AAD25848.3| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 554

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 136/426 (31%), Positives = 209/426 (49%), Gaps = 55/426 (12%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           K+ +LW+++Q L +LKR+DL  SK L +LPDLS A NLE+L+L  CSSL E   SI    
Sbjct: 1   KLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLNGCSSLVELPFSIGNAT 60

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
           KL  L+L  C SL  LP+SI +   L+ +    C NL                       
Sbjct: 61  KLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLV---------------------- 98

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
           ELPSSI   +N+ EL +  C  L+ + SSI     L+ + +  C +L+  E+PS   + T
Sbjct: 99  ELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLK--ELPSSIGNCT 156

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG---NLQALNR 311
             K     EL L  C     LPS      +L  L +  C +   LP  +G   NL+ LN 
Sbjct: 157 NLK-----ELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNL 211

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
             +  + + ELP  +G L  LS+L L+ C +L+ + ++I  L+ +  +++++C  LK FP
Sbjct: 212 GYL--SCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NLEFLNELDLTDCILLKTFP 268

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
            I       + I+R+        + +++E +PSSL  +  L  L+++  + L      L 
Sbjct: 269 VI------STNIKRLHL------RGTQIEEVPSSLRSWPRLEDLQMLYSENLSEFSHVLE 316

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            +  LE   +    IRE+   L ++  L +LKL  C    SLP    +S SL  L+  +C
Sbjct: 317 RITVLE---LSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQ---LSDSLIILDAENC 370

Query: 491 KNFMRL 496
            +  RL
Sbjct: 371 GSLERL 376



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 246/561 (43%), Gaps = 104/561 (18%)

Query: 282 FKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
            ++L  +++    N + LPD     NL+ LN   ++G +++ ELP  +G    L KLEL 
Sbjct: 12  LRNLKRMDLFSSKNLKELPDLSSATNLEVLN---LNGCSSLVELPFSIGNATKLLKLELS 68

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFP------------EIPFCNIDGSGIERI 386
            CS L  + SSI    ++++I+ S+C NL   P            ++  C    S ++ +
Sbjct: 69  GCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCC----SSLKEL 124

Query: 387 PSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           PSS+        L L  CS L+ LPSS+    +L  L +  C  L +LP  +GN   LE+
Sbjct: 125 PSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEK 184

Query: 439 LRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           L + G   + E+P  + +   L  L L   S    LPS +     L+ L +  CK    L
Sbjct: 185 LILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVL 244

Query: 497 PDEIGNLEYL---------------------KVLTIKGTAIREVPESLGQLSSLEWL-VL 534
           P  I NLE+L                     K L ++GT I EVP SL     LE L +L
Sbjct: 245 PTNI-NLEFLNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSLRSWPRLEDLQML 303

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLR 593
              NL    E  + L  +  L+LS+ N+  +   L+ ++ L+ L L     L  +P+   
Sbjct: 304 YSENLS---EFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSD 360

Query: 594 SFPTSIPSEFTSL-RLS----------VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
           S          SL RL           +D  NCLKLD      II+      S+      
Sbjct: 361 SLIILDAENCGSLERLGCSFNNPNIKCLDFTNCLKLDKEARDLIIQATARHYSI------ 414

Query: 643 TKSMYFPGNEIPKWFRHQSTGSTISLKTPQ---PTGYNKLMGFAFCVVVACSVSECCRHE 699
                 P  E+ ++  +++ GS++++K  Q   PT     M F  C+V+A +        
Sbjct: 415 -----LPSREVHEYITNRAIGSSLTVKLNQRALPTS----MRFKACIVLADNGG-----R 460

Query: 700 SVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGE---NSCKRS 756
              ++ +  ++  + +R++   D  TS+Y+  ++H+  +  FL   ++  E   +    S
Sbjct: 461 EAGNEGRMEVYMTIMERQN---DFITSTYVS-LNHIFPE--FLREHMYTVEVLVDVEVTS 514

Query: 757 DE--FFFHIDRSCCEVKKCGI 775
           DE  F F ++    E+ +CG+
Sbjct: 515 DELVFDFQLNSEKWEIGECGV 535



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 159/329 (48%), Gaps = 41/329 (12%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLE 114
           L+T++  H ENLV L  P S        + N  +LK +DL     L +LP  +    NL+
Sbjct: 86  LQTIDFSHCENLVEL--PSS--------IGNATNLKELDLSCCSSLKELPSSIGNCTNLK 135

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKN 173
            L L  CSSL E  SSI     L+ L L  C SL  LP+SI +   L++L+L GC +L  
Sbjct: 136 KLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVE 195

Query: 174 LPKMTSCHLRSTLPLLGVG----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           LP        + L +L +G    + ELPS I  L  + EL +  CK+L+ + ++I  L+F
Sbjct: 196 LPSFIG--KATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNI-NLEF 252

Query: 230 LESIRIHRCPNLQFLEMPSCNID-----GTRSKEQPSSELKLKKCPR--------PESLP 276
           L  + +  C  L+   + S NI      GT+ +E PSS   L+  PR         E+L 
Sbjct: 253 LNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSS---LRSWPRLEDLQMLYSENLS 309

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKL 335
               + + +T LE+ D  N   +   L  +  L RL + G   +  LP+    L +   L
Sbjct: 310 EFSHVLERITVLELSDI-NIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSDSLII---L 365

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNC 364
           + +NC  LE +  S F   +++ ++ +NC
Sbjct: 366 DAENCGSLERLGCS-FNNPNIKCLDFTNC 393


>gi|224112118|ref|XP_002332830.1| predicted protein [Populus trichocarpa]
 gi|222870202|gb|EEF07333.1| predicted protein [Populus trichocarpa]
          Length = 330

 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 174/333 (52%), Gaps = 20/333 (6%)

Query: 18  MTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSK 76
           M++LRLLK     N  +    E +   +LR+ EWH +P K+L   L  + LV L M  S 
Sbjct: 1   MSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVDELVELHMANSS 56

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           + QLW   ++ V LK I+L  S  L+K PDL+   NLE L L  C SL+E H S+    K
Sbjct: 57  IEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLESLILEGCISLSEVHPSLGRHKK 116

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT---SCHLRSTLPLLGVGI 193
           L+ ++L  C+S+  LP+++  + LK   L GCS L+N P +    +C ++  L L   GI
Sbjct: 117 LQYVNLINCRSIRILPSNLEMESLKFFTLDGCSKLENFPDIVGNMNCLMK--LCLDRTGI 174

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            EL  SI+ +  +  L + +CK+LE+IS SI  L+ L+ + +  C  L+       NI G
Sbjct: 175 AELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELK-------NIPG 227

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT--SLEIIDCPNFERLPDELGNLQALNR 311
              K +   E  +        LP+   + K+L   SL+ +   N   LP+++G L +L  
Sbjct: 228 NLEKVESLEEFDVSGT-SIRQLPASIFLLKNLAVLSLDGLRACNLRALPEDIGCLSSLKS 286

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L +       LP  + QL+ L KL L++C+ LE
Sbjct: 287 LDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLE 319



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 20/279 (7%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N S  +L Y   S  KLK +    S+ +S   +L G P + 
Sbjct: 36  KSLPAGL-QVDELVELHMANSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLE 94

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C  +  LPS+L M +SL    +  C KLE 
Sbjct: 95  SLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLEM-ESLKFFTLDGCSKLEN 153

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L +L ++ TGI E+  S+  +  L  L +  C   ES+   +   KSL  
Sbjct: 154 FPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKK 213

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD---NNLQI 541
           L++  C     +P  +  +E L+   + GT+IR++P S+  L +L  L L      NL+ 
Sbjct: 214 LDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGLRACNLRA 273

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           +PE +  LSSL SL LS NN   +P  ++ LS L+ L L
Sbjct: 274 LPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVL 312



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 30/269 (11%)

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC----NIDGTRSKEQPSSELKLKKCPR 271
           ++ N+S+S++     +S  +   PNL+ L +  C     +  +  + +    + L  C  
Sbjct: 71  KIINLSNSLY---LSKSPDLTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRS 127

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
              LPS   M +SL    +  C   E  PD +GN+  L +L +D T I EL   +  +  
Sbjct: 128 IRILPSNLEM-ESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIG 186

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIE 384
           L  L + NC +LE IS SI  LKS++ +++S CS LK  P        +   ++ G+ I 
Sbjct: 187 LEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIR 246

Query: 385 RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           ++P+S+  L   + L              SL+ +    L  LP+++G L +L+ L +   
Sbjct: 247 QLPASIFLLKNLAVL--------------SLDGLRACNLRALPEDIGCLSSLKSLDLSRN 292

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESL 472
               +P+S+ QL+ L KL L+ C+  ESL
Sbjct: 293 NFVSLPRSINQLSGLEKLVLEDCTMLESL 321



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 52/268 (19%)

Query: 282 FKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
           +KS   L+II+  N     + PD L  +  L  LI++G  ++ E+   LG+   L  + L
Sbjct: 64  YKSAVKLKIINLSNSLYLSKSPD-LTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNL 122

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIERIPSS 389
            NC  +  + S++ +++S++   +  CS L+ FP+I          C +D +GI  +  S
Sbjct: 123 INCRSIRILPSNL-EMESLKFFTLDGCSKLENFPDIVGNMNCLMKLC-LDRTGIAELSPS 180

Query: 390 --------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                   VL +N C KLES+  S+   KSL  L++  C +L+ +P  L  +E+LEE  V
Sbjct: 181 IRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDV 240

Query: 442 EGTGIREVPKS---LAQLALSKLK-LKKCS----------------------SFESLPSR 475
            GT IR++P S   L  LA+  L  L+ C+                      +F SLP  
Sbjct: 241 SGTSIRQLPASIFLLKNLAVLSLDGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRS 300

Query: 476 LYVSKSLTSLEIIDC---KNFMRLPDEI 500
           +     L  L + DC   ++ + +P ++
Sbjct: 301 INQLSGLEKLVLEDCTMLESLLEVPSKV 328


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 279/577 (48%), Gaps = 76/577 (13%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           T L   +QN + ++ +DL+Y KL T LP ++   QNL+ LDL + +SLT     I  L  
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQKL-TILPKEIGQLQNLQRLDLSF-NSLTTLPKEIGQLRN 95

Query: 137 LEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIE 194
           L+ LDL    SLT+LP  +   + L+RL L     L  LPK +        L L    + 
Sbjct: 96  LQELDLS-FNSLTTLPKEVGQLENLQRLNL-NSQKLTTLPKEIGQLKNLQLLILYYNQLT 153

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP  I  L N+ ++L  +  +L  + + I +L+           NLQ L++ +  +   
Sbjct: 154 ALPKEIGQLKNL-KVLFLNNNQLTTLPTEIRQLK-----------NLQMLDLGNNQLT-- 199

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL--EIIDCPNFERL----------PDE 302
                    +  K+  + ++L      +  LT L  EI    N +RL          P E
Sbjct: 200 ---------ILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKE 250

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G L+ L  L +   ++  LP+ +GQL  L +L+L + + L  +   I +LK+++ +++ 
Sbjct: 251 IGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDL-HQNRLATLPMEIGQLKNLQELDL- 308

Query: 363 NCSNLKGFP-EI-PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
           N + L   P EI    N+    + R           ++L +LP  +   ++L +L +I  
Sbjct: 309 NSNKLTTLPKEIRQLRNLQELDLHR-----------NQLTTLPKEIGQLQNLKTLNLI-V 356

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
            +L  LP E+G L+ L+ L +  T +  +PK + +L  L  L L   +   +LP  +   
Sbjct: 357 TQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLI-VTQLTTLPKEIGEL 415

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL 539
           ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+WL L  N L
Sbjct: 416 QNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQL 474

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
             +P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN L           T++
Sbjct: 475 TTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL-----------TTL 523

Query: 600 PSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 524 PKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 556



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 260/555 (46%), Gaps = 68/555 (12%)

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
           +L +   K+T L  ++  L +L+R+DL ++ L T   ++   +NL+ LDL + +SLT   
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSF-NSLTTLP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTL 186
             +  L  L+ L+L+  K LT+LP  I   K L+ L+L   + L  LPK +        L
Sbjct: 111 KEVGQLENLQRLNLNSQK-LTTLPKEIGQLKNLQLLILY-YNQLTALPKEIGQLKNLKVL 168

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------R 234
            L    +  LP+ I+ L N+ ++L     +L  +   I +LQ L+ +             
Sbjct: 169 FLNNNQLTTLPTEIRQLKNL-QMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKE 227

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           I +  NLQ L     N++  +    P      K+  +  +L      F SLT+L      
Sbjct: 228 IGQLENLQRL-----NLNSQKLTTLP------KEIGQLRNLQWLDLSFNSLTTL------ 270

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
                P E+G L+ L RL +    +  LP  +GQL  L +L+L N ++L  +   I +L+
Sbjct: 271 -----PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLR 324

Query: 355 SVESI------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK------- 395
           +++ +            EI    NLK        N+  + +  +P  + +L         
Sbjct: 325 NLQELDLHRNQLTTLPKEIGQLQNLKTL------NLIVTQLTTLPKEIGELQNLKTLNLI 378

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            ++L +LP  +   ++L +L +I   +L  LP E+G L+ L+ L +    +  +PK + +
Sbjct: 379 VTQLTTLPKEIGELQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGE 437

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
           L   ++ + + +   +LP  +   ++L  L +        LP EIG L+ L+ L +    
Sbjct: 438 LQNLEILVLRENRITALPKEIGQLQNLQWLGL-HQNQLTTLPKEIGQLQNLQRLDLHQNQ 496

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +  +P+ +GQL +L+ L L +N L  +P+ + QL +L  L L NN L  +P+ +  L SL
Sbjct: 497 LTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSL 556

Query: 576 KYLDLFENNLDRIPE 590
           + L L  N L  +P+
Sbjct: 557 QVLALGSNRLSTLPK 571



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 253/550 (46%), Gaps = 60/550 (10%)

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYC 121
             ENL  L +   K+T L  ++  L +L+ + L Y++L T LP ++   +NL++L L   
Sbjct: 115 QLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQL-TALPKEIGQLKNLKVLFLN-N 172

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTS 179
           + LT   + I+ L  L++LDL   + LT LP  I   + L+ L L   + L  LPK +  
Sbjct: 173 NQLTTLPTEIRQLKNLQMLDLGNNQ-LTILPKEIGQLQNLQELYL-SYNQLTILPKEIGQ 230

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR-- 237
                 L L    +  LP  I  L N+ + L  S   L  +   + +L+ L+ + +H+  
Sbjct: 231 LENLQRLNLNSQKLTTLPKEIGQLRNL-QWLDLSFNSLTTLPKEVGQLENLQRLDLHQNR 289

Query: 238 ----------CPNLQFLEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFK 283
                       NLQ L++ S  +  T  KE    +   EL L +  +  +LP      +
Sbjct: 290 LATLPMEIGQLKNLQELDLNSNKLT-TLPKEIRQLRNLQELDLHRN-QLTTLPKEIGQLQ 347

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L +L +I       LP E+G LQ L  L +  T +  LP+ +G        EL+N   L
Sbjct: 348 NLKTLNLI-VTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIG--------ELQNLKTL 398

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC------- 396
             I + +  L      EI    NLK        N+  + +  +P  + +L          
Sbjct: 399 NLIVTQLTTLPK----EIGELQNLKTL------NLLDNQLTTLPKEIGELQNLEILVLRE 448

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           +++ +LP  +   ++L  L +    +L  LP E+G L+ L+ L +    +  +PK + QL
Sbjct: 449 NRITALPKEIGQLQNLQWLGL-HQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQL 507

Query: 457 A-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKG 513
             L +L L + +   +LP  +   + L +L ++D  N     LP E+  L+ L+VL +  
Sbjct: 508 QNLQELCLDE-NQLTTLPKEI---EQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 563

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             +  +P+ +GQL +L+ L L  N L  +P+ + QL +L  L L  N L   P+ +  L 
Sbjct: 564 NRLSTLPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK 623

Query: 574 SLKYLDLFEN 583
           +L+ L L+ N
Sbjct: 624 NLQELHLYLN 633


>gi|357468515|ref|XP_003604542.1| Resistance protein [Medicago truncatula]
 gi|355505597|gb|AES86739.1| Resistance protein [Medicago truncatula]
          Length = 1088

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 134/243 (55%), Gaps = 8/243 (3%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKN-KCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
           +++++P+ F+KMT LR L F G  + + +   L+  P T+LRY  W  +PLK+       
Sbjct: 587 KLKLSPHVFAKMTNLRYLDFIGKYDLELLPQGLQSFP-TDLRYICWIHYPLKSFPKKFSG 645

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NLV L    S+V  LW  VQ+LV+LK + L  S+ L +LPD S A NL++L++  C SL
Sbjct: 646 KNLVILDFSHSRVENLWCGVQDLVNLKEVRLTSSRFLKELPDFSKATNLKVLNITDCLSL 705

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
              H SI  L KL  LDL  C SLT+  ++ H   L  L L  C +L+     T+  ++ 
Sbjct: 706 ESVHPSIFSLEKLVQLDLSHCFSLTTFTSNSHLSSLLYLNLGSCISLRTFSVTTNNLIK- 764

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L  +GI ELPS  +C S + E+L+     +E I SSI  L  L  + I  C  L+ L
Sbjct: 765 -LDLTDIGINELPSLFRCQSKL-EILVLRKSEIEIIPSSIQNLTRLRKLDIRYC--LKLL 820

Query: 245 EMP 247
            +P
Sbjct: 821 ALP 823



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 42/292 (14%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALEELRVEGTGIREVPKSLA 454
           S++E+L   +    +L  + +   + L+ LPD  +  NL+ L     +   +  V  S+ 
Sbjct: 656 SRVENLWCGVQDLVNLKEVRLTSSRFLKELPDFSKATNLKVLN--ITDCLSLESVHPSIF 713

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L  L +L L  C S  +  S  ++S SL  L +  C +         NL  L +  I  
Sbjct: 714 SLEKLVQLDLSHCFSLTTFTSNSHLS-SLLYLNLGSCISLRTFSVTTNNLIKLDLTDI-- 770

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             I E+P      S LE LVL  + ++IIP S+  L+ L  L +    L+ +   + PLS
Sbjct: 771 -GINELPSLFRCQSKLEILVLRKSEIEIIPSSIQNLTRLRKLDI-RYCLKLLALPVLPLS 828

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI------- 626
               L      ++ I      FP++I  +F   +  ++  NC  LD + L  I       
Sbjct: 829 VETLL------VECISLKTVLFPSTISEQFKENKKRIEFWNCFNLDEHSLVNIGFNMKIN 882

Query: 627 -IK---------------DGWMKQSVNGETYITKSMY-FPGNEIPKWFRHQS 661
            IK               D +     N  +Y  +++Y +PG+ +P+W  +++
Sbjct: 883 LIKFAYQHLLTLEHDDYVDSYADYEYNHSSY--QALYVYPGSSVPEWLEYKT 932


>gi|168016438|ref|XP_001760756.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688116|gb|EDQ74495.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 511

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 234/516 (45%), Gaps = 51/516 (9%)

Query: 101 LTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
           L  LP DL+   +L  LDL  CSSLT   + +  L+ L  LD   C SLTSL   + +  
Sbjct: 2   LISLPNDLANLSSLTRLDLSDCSSLTSLSNDLTNLSSLTRLDFSGCSSLTSLTNDLTNLS 61

Query: 159 YLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKR 216
            L RL   GCS+L +L   +T+    + L   G   +  LP+    LS++  L   S  R
Sbjct: 62  SLTRLDFSGCSSLTSLTNDLTNLSSLTILYFCGCSSLTSLPNDFANLSSLTTLYFSSFSR 121

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L ++ + +  L  L ++    C +L  L   S N+          + L    C    SL 
Sbjct: 122 LISLPNDLKNLSSLTTLNFSGCSSLISLPNDSANLSSL-------TTLYFSGCLYLTSLT 174

Query: 277 SGQCMFKSLTSLEIID-CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSK 334
           +      SL  L +   C     LP++L NL  L  L   G +++  LP  L  L+ L+ 
Sbjct: 175 NDLINLASLIKLHLSGCCSRLLSLPNDLKNLSFLTTLNFSGSSSLISLPNDLANLSSLTT 234

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
           L   +CS L  + +    L S+ S+ +S C NL   P       D + +    S+ L  +
Sbjct: 235 LYFSSCSRLITLRNDFVNLFSLRSLYLSGCLNLTSLPN------DLANLSS--STTLYFS 286

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSL 453
            CS+L SL + L    S TSL      +L  L ++L NL + + L   G + +  +P  L
Sbjct: 287 SCSRLISLTNDLANLSSWTSLYFSGFSRLISLTNDLKNLSSWKTLNFSGSSSLISLPNDL 346

Query: 454 AQLA--------------------------LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           A L+                          L +L LK CSS   LP++L    SL  L +
Sbjct: 347 ANLSSLTTLYFSSCSRLTTFLPKNLRNLSTLRRLGLKGCSSLACLPNKLPNLFSLIELNL 406

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPES 545
             C + ++LP+++ NL +L+ L +   +++  +P  L  LSSL  L LSD ++L  +P+ 
Sbjct: 407 SGCSSLIQLPNDLVNLSFLRTLNLHHCSSLTSLPNELANLSSLTTLDLSDCSSLISLPKE 466

Query: 546 LNQLSSLVSLKLSNN-NLERIPERLDPLSSLKYLDL 580
           L  LSS  +L L +  +L  +   L  LSSL  L+L
Sbjct: 467 LANLSSFTTLNLYHCLSLISLSNELANLSSLIMLNL 502



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 222/496 (44%), Gaps = 51/496 (10%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +D+ NL SL R+D      LT L  DL+   +L  LD   CSSLT   + +  
Sbjct: 24  SSLTSLSNDLTNLSSLTRLDFSGCSSLTSLTNDLTNLSSLTRLDFSGCSSLTSLTNDLTN 83

Query: 134 LNKLEVLDLDRCKSLTSLP---------TSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           L+ L +L    C SLTSLP         T+++     RL+    ++LKNL  +T+ +   
Sbjct: 84  LSSLTILYFCGCSSLTSLPNDFANLSSLTTLYFSSFSRLISLP-NDLKNLSSLTTLNFSG 142

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC------ 238
              L+      LP+    LS++  L    C  L ++++ +  L  L  + +  C      
Sbjct: 143 CSSLI-----SLPNDSANLSSLTTLYFSGCLYLTSLTNDLINLASLIKLHLSGCCSRLLS 197

Query: 239 -----PNLQFLEMPSCNIDGTRS---------KEQPSSELKLKKCPRPESLPSGQCMFKS 284
                 NL FL   + N  G+ S              + L    C R  +L +      S
Sbjct: 198 LPNDLKNLSFLT--TLNFSGSSSLISLPNDLANLSSLTTLYFSSCSRLITLRNDFVNLFS 255

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSEL 343
           L SL +  C N   LP++L NL +   L     + +  L   L  L+  + L     S L
Sbjct: 256 LRSLYLSGCLNLTSLPNDLANLSSSTTLYFSSCSRLISLTNDLANLSSWTSLYFSGFSRL 315

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES-L 402
             +++ +  L S +++  S  S+L   P       D + +  +  + L  + CS+L + L
Sbjct: 316 ISLTNDLKNLSSWKTLNFSGSSSLISLPN------DLANLSSL--TTLYFSSCSRLTTFL 367

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSK 460
           P +L    +L  L +  C  L  LP++L NL +L EL + G + + ++P  L  L+ L  
Sbjct: 368 PKNLRNLSTLRRLGLKGCSSLACLPNKLPNLFSLIELNLSGCSSLIQLPNDLVNLSFLRT 427

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREV 519
           L L  CSS  SLP+ L    SLT+L++ DC + + LP E+ NL     L +    ++  +
Sbjct: 428 LNLHHCSSLTSLPNELANLSSLTTLDLSDCSSLISLPKELANLSSFTTLNLYHCLSLISL 487

Query: 520 PESLGQLSSLEWLVLS 535
              L  LSSL  L LS
Sbjct: 488 SNELANLSSLIMLNLS 503



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 189/425 (44%), Gaps = 42/425 (9%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLK-YSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +D  NL SL  +    +S+L++   DL    +L  L+   CSSL    +    
Sbjct: 96  SSLTSLPNDFANLSSLTTLYFSSFSRLISLPNDLKNLSSLTTLNFSGCSSLISLPNDSAN 155

Query: 134 LNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGC--------SNLKNLPKMTSCHLRS 184
           L+ L  L    C  LTSL    I+   L +L L GC        ++LKNL  +T+ +   
Sbjct: 156 LSSLTTLYFSGCLYLTSLTNDLINLASLIKLHLSGCCSRLLSLPNDLKNLSFLTTLNFSG 215

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
           +  L+      LP+ +  LS++  L   SC RL  + +    L  L S+ +  C NL  L
Sbjct: 216 SSSLI-----SLPNDLANLSSLTTLYFSSCSRLITLRNDFVNLFSLRSLYLSGCLNLTSL 270

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                N+         S+ L    C R  SL +      S TSL          L ++L 
Sbjct: 271 PNDLANL-------SSSTTLYFSSCSRLISLTNDLANLSSWTSLYFSGFSRLISLTNDLK 323

Query: 305 NLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELE-YISSSIFKLKSVESIEIS 362
           NL +   L   G++ +  LP  L  L+ L+ L   +CS L  ++  ++  L ++  + + 
Sbjct: 324 NLSSWKTLNFSGSSSLISLPNDLANLSSLTTLYFSSCSRLTTFLPKNLRNLSTLRRLGLK 383

Query: 363 NCSNLKGFP-EIPFC------NIDG-SGIERIPSSV--------LKLNKCSKLESLPSSL 406
            CS+L   P ++P        N+ G S + ++P+ +        L L+ CS L SLP+ L
Sbjct: 384 GCSSLACLPNKLPNLFSLIELNLSGCSSLIQLPNDLVNLSFLRTLNLHHCSSLTSLPNEL 443

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLK 464
               SLT+L++ DC  L  LP EL NL +   L +     +  +   LA L +L  L L 
Sbjct: 444 ANLSSLTTLDLSDCSSLISLPKELANLSSFTTLNLYHCLSLISLSNELANLSSLIMLNLS 503

Query: 465 KCSSF 469
            CSS 
Sbjct: 504 GCSSL 508



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 127/279 (45%), Gaps = 22/279 (7%)

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----- 372
           ++  LP  L  L+ L++L+L +CS L  +S+ +  L S+  ++ S CS+L          
Sbjct: 1   SLISLPNDLANLSSLTRLDLSDCSSLTSLSNDLTNLSSLTRLDFSGCSSLTSLTNDLTNL 60

Query: 373 IPFCNIDGSGIERIPS-----------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
                +D SG   + S           ++L    CS L SLP+      SLT+L      
Sbjct: 61  SSLTRLDFSGCSSLTSLTNDLTNLSSLTILYFCGCSSLTSLPNDFANLSSLTTLYFSSFS 120

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVS 479
           +L  LP++L NL +L  L   G + +  +P   A L +L+ L    C    SL + L   
Sbjct: 121 RLISLPNDLKNLSSLTTLNFSGCSSLISLPNDSANLSSLTTLYFSGCLYLTSLTNDLINL 180

Query: 480 KSLTSLEIID-CKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD- 536
            SL  L +   C   + LP+++ NL +L  L   G +++  +P  L  LSSL  L  S  
Sbjct: 181 ASLIKLHLSGCCSRLLSLPNDLKNLSFLTTLNFSGSSSLISLPNDLANLSSLTTLYFSSC 240

Query: 537 NNLQIIPESLNQLSSLVSLKLSNN-NLERIPERLDPLSS 574
           + L  +      L SL SL LS   NL  +P  L  LSS
Sbjct: 241 SRLITLRNDFVNLFSLRSLYLSGCLNLTSLPNDLANLSS 279


>gi|332330342|gb|AEE43928.1| TIR-NBS-LRR resistance protein muRdr1D [Rosa multiflora]
          Length = 1156

 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 187/379 (49%), Gaps = 49/379 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
           E   N   F KM +L+LL          +H+L    G  +    LR+ +W  +P K+L  
Sbjct: 549 EADWNFEAFFKMCKLKLL---------YIHNLRLSLGPKYLPNALRFLKWSWYPSKSLPP 599

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  SK+  LW+ ++ L  LK IDL YS  L + PD +  QNLE L L  
Sbjct: 600 GFQPDELAELSLAYSKIDHLWNGIKYLGKLKSIDLSYSINLKRTPDFTGIQNLEKLVLKG 659

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 660 CTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQ 719

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI+ L                +S S+ +L  L+ I +   P
Sbjct: 720 MKRLSKLCLGGTAVEKLPSSIEHL----------------MSESLVELD-LKGIFMREQP 762

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL++        +++   S  L  +K P P   L +    F SLT+L + DC   E 
Sbjct: 763 YSFFLKL--------QNRIVSSFGLFPRKSPHPLVPLLASLKHFSSLTTLNLNDCNLCEG 814

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G+L +L RL + G     LP  +  L  L  ++++NC  L+ +      L    
Sbjct: 815 EIPNDIGSLSSLERLELRGNNFVSLPVSIHLLFKLQGIDVQNCKRLQQLPD----LPVSR 870

Query: 358 SIEI--SNCSNLKGFPEIP 374
           S+++   NC++L+  P+ P
Sbjct: 871 SLQVKSDNCTSLQVLPDPP 889



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 235/530 (44%), Gaps = 95/530 (17%)

Query: 320  RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
            + LP G  Q   L++L L   S+++++ + I  L  ++SI++S   NLK  P       D
Sbjct: 595  KSLPPGF-QPDELAELSLAY-SKIDHLWNGIKYLGKLKSIDLSYSINLKRTP-------D 645

Query: 380  GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
             +GI+ +   VLK   C+ L  +  S+ + K L      +CK ++ LP E+ N+E LE  
Sbjct: 646  FTGIQNLEKLVLK--GCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETF 702

Query: 440  RVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL--YVSKSLTSLEIIDCKNFMR 495
             V G + ++ +P+ + Q+  LSKL L   ++ E LPS +   +S+SL  L++     FMR
Sbjct: 703  DVSGCSKLKMIPEFVGQMKRLSKLCLGG-TAVEKLPSSIEHLMSESLVELDLKGI--FMR 759

Query: 496  LPDEIGNLEYLK----VLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL--QII 542
               E     +LK    +++  G   R+ P        SL   SSL  L L+D NL    I
Sbjct: 760  ---EQPYSFFLKLQNRIVSSFGLFPRKSPHPLVPLLASLKHFSSLTTLNLNDCNLCEGEI 816

Query: 543  PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPS 601
            P  +  LSSL  L+L  NN   +P  +  L  L+ +D+     L ++P+   S    + S
Sbjct: 817  PNDIGSLSSLERLELRGNNFVSLPVSIHLLFKLQGIDVQNCKRLQQLPDLPVSRSLQVKS 876

Query: 602  EF-TSLRL-------------SVDLRNCLKLDPNE-----LSEIIK-------------- 628
            +  TSL++             S++  NCL    N+     L  ++K              
Sbjct: 877  DNCTSLQVLPDPPDLCRLSYFSLNCVNCLSTVGNQDASYFLYSVLKRLLEVLSLSLSLSL 936

Query: 629  ---------DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKL 679
                     D  +       ++       PG+EIP+WF +QS G +++ K P     NK 
Sbjct: 937  SLSLSQWLCDMMVHMQETPRSFRRFRFVIPGSEIPEWFDNQSVGDSVTEKLPSGACNNKW 996

Query: 680  MGFAFCVVVACSVSECCRHES---VEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE 736
            +GFA C +     +     E    V D   C ++   C   S+G  S    +   +    
Sbjct: 997  IGFAVCALFVPQDNPSAVPEDPGLVPD--TCEIW---CRWNSDGISSGGHGF--PVKQFV 1049

Query: 737  SDHVFL--GSSIFAGENSCKRSDEFFFHIDRS-----CCEVKKCGIHFVH 779
            SDH+FL    S F   +      +FFF + R+     C +VKKCG+  ++
Sbjct: 1050 SDHLFLLVFPSPFRNPDYTWNEVKFFFKVTRAVGNNTCIKVKKCGVRALY 1099


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 60/422 (14%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV--PFTELRYFEWHQFPLKT 58
           +SK   E+ I+     ++ + + ++    KN  +   L+ +     ++R  +W+ +    
Sbjct: 578 LSKNEEELNISEKALERIHDFQFVRI-NDKNHALHERLQDLICHSPKIRSLKWYSYQNIC 636

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +  + E LV L M  SK+ +LW+  + L +LK +DL YS  L +LP+LS A NLE L+
Sbjct: 637 LPSTFNPEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELN 696

Query: 118 LGYCSSLTETHSSIQYLNKLEVLD-----------------------LDRCKSLTSLPTS 154
           L  CSSL E  SSI+ L  L++LD                       LD C+SL  LP S
Sbjct: 697 LRNCSSLVELPSSIEKLTSLQILDLQGCSSLVELPSFGNATKLEILYLDYCRSLEKLPPS 756

Query: 155 IHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV-GIEELPSSIKCLSN--IGELLI 211
           I++  L++L LR CS +  LP + +      L LL    + ELP SI    N  + EL I
Sbjct: 757 INANNLQKLSLRNCSRIVELPAIENATNLWELNLLNCSSLIELPLSIGTARNLFLKELNI 816

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
             C  L  + SSI  +  L+   +  C NL  +E+PS     +    Q   +L ++ C +
Sbjct: 817 SGCSSLVKLPSSIGDMTNLKEFDLSNCSNL--VELPS-----SIGNLQNLCKLIMRGCSK 869

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
            E+LP      KSL +L + DC   +  P+   +++ L    + GTAI+E+P  +   + 
Sbjct: 870 LEALPIN-INLKSLDTLNLTDCSQLKSFPEISTHIKYLR---LTGTAIKEVPLSIMSWSP 925

Query: 332 LSKL-------------------ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           L++                    EL+   +++ ++  + ++  +    ++NC+NL   P+
Sbjct: 926 LAEFQISYFESLKEFPHAFDIITELQLSKDIQEVTPWVKRMSRLRYFRLNNCNNLVSLPQ 985

Query: 373 IP 374
           +P
Sbjct: 986 LP 987



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 206/460 (44%), Gaps = 64/460 (13%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L + +C +   LP  +  L +L  L + G +++ ELP   G    L  L L  C  
Sbjct: 691  NLEELNLRNCSSLVELPSSIEKLTSLQILDLQGCSSLVELP-SFGNATKLEILYLDYCRS 749

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            LE +  SI    +++ + + NCS +   P I     + + +       L L  CS L  L
Sbjct: 750  LEKLPPSI-NANNLQKLSLRNCSRIVELPAIE----NATNLWE-----LNLLNCSSLIEL 799

Query: 403  PSSLCMFKSL--TSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-L 458
            P S+   ++L    L I  C  L +LP  +G++  L+E  +   + + E+P S+  L  L
Sbjct: 800  PLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQNL 859

Query: 459  SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
             KL ++ CS  E+LP  + + KSL +L + DC      P+   +++YL+   + GTAI+E
Sbjct: 860  CKLIMRGCSKLEALPININL-KSLDTLNLTDCSQLKSFPEISTHIKYLR---LTGTAIKE 915

Query: 519  VPESLGQLSSL-EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            VP S+   S L E+ +    +L+  P + + ++ L   +LS +  E  P  +  +S L+Y
Sbjct: 916  VPLSIMSWSPLAEFQISYFESLKEFPHAFDIITEL---QLSKDIQEVTP-WVKRMSRLRY 971

Query: 578  LDLFE-NNLDRIPEYLRSFPTSIPSEFTSLR----------LSVDLRNCLKLDPNELSEI 626
              L   NNL  +P+   S          SL           +S+    C KL+  E  ++
Sbjct: 972  FRLNNCNNLVSLPQLPDSLAYLYADNCKSLEKLDCCFNNPWISLHFPKCFKLN-QEARDL 1030

Query: 627  IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGF 682
            I            T  ++    PG ++P  F H++T G  + +K   +P PT     + F
Sbjct: 1031 IM----------HTSTSRIAMLPGTQVPACFNHRATSGDYLKIKLKESPLPTT----LRF 1076

Query: 683  AFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD 722
              C+++         +E +  DRK  L     D R E  D
Sbjct: 1077 KACIMLVMV------NEGISYDRKIKL---SVDIRDEQND 1107


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 188/400 (47%), Gaps = 45/400 (11%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILH- 63
           + E + N  +FSK+++LRLLK C  +   +   L  +P + L+   W   PLKTL + + 
Sbjct: 546 DCEARWNTESFSKISQLRLLKLCDMQ---LPRGLNCLP-SALKVVHWRGCPLKTLPLSNQ 601

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            + +V LK+P SK+ QLW   + L  L+ I+L +SK L + PD     NLE L L  C+S
Sbjct: 602 LDEVVDLKLPYSKIEQLWHGTELLEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTS 661

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC--H 181
           LTE H S+    KL  L+ + CK L +LP  +    L  L L GCS  K LP+      H
Sbjct: 662 LTEVHPSLVRHKKLVWLNFEDCKKLKTLPRKMEMSSLNDLNLSGCSEFKCLPEFAESMEH 721

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           L S L L G  I +LP+S+ CL  +  L   +CK L  +  +I KL+ L  + +  C  L
Sbjct: 722 L-SVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKL 780

Query: 242 QFLE--------MPSCNIDGTRSKEQPS--------SELKLKKCPRPES-------LPSG 278
             L         +   +   T  +E PS         ++ +  C  P S       LP  
Sbjct: 781 SSLPEGLKEIKCLEELDASETAIQELPSFVFYLENLRDISVAGCKGPVSKSVNSFFLPFK 840

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLE 336
           +      TS+         RLP    +L +L R+ +    + E   P   G    LS L 
Sbjct: 841 RLFGNQQTSIGF-------RLPPSALSLPSLKRINLSYCNLSEESFP---GDFCSLSSLM 890

Query: 337 LKNCSELEYIS--SSIFKLKSVESIEISNCSNLKGFPEIP 374
           + N +   ++S  S I KL  +E + +++C  L+  P++P
Sbjct: 891 ILNLTGNNFVSLPSCISKLAKLEHLILNSCKKLQTLPKLP 930



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 195/461 (42%), Gaps = 63/461 (13%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
            E L  G  + + L  + +    N ++ PD +G +  L  L++ G T++ E+   L +   
Sbjct: 616  EQLWHGTELLEKLRFINLSFSKNLKQSPDFVG-VPNLESLVLKGCTSLTEVHPSLVRHKK 674

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGI 383
            L  L  ++C +L+ +   + ++ S+  + +S CS  K  PE           C ++G+ I
Sbjct: 675  LVWLNFEDCKKLKTLPRKM-EMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLC-LEGTAI 732

Query: 384  ERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
             ++P+S+        L    C  L  LP ++   +SL  L +  C KL  LP+ L  ++ 
Sbjct: 733  TKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKLSSLPEGLKEIKC 792

Query: 436  LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            LEEL    T I+E                       LPS ++  ++L  + +  CK  + 
Sbjct: 793  LEELDASETAIQE-----------------------LPSFVFYLENLRDISVAGCKGPVS 829

Query: 496  LPDEIGNLEYLKVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNL--QIIPESLNQLSSL 552
                   L + ++   + T+I   +P S   L SL+ + LS  NL  +  P     LSSL
Sbjct: 830  KSVNSFFLPFKRLFGNQQTSIGFRLPPSALSLPSLKRINLSYCNLSEESFPGDFCSLSSL 889

Query: 553  VSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLRSFPTSIPSEFTSLRL 608
            + L L+ NN   +P  +  L+ L++L L        L ++P  +R    S  + F   + 
Sbjct: 890  MILNLTGNNFVSLPSCISKLAKLEHLILNSCKKLQTLPKLPSNMRGLDASNCTSFEISKF 949

Query: 609  SVDLRNCLKLD------PNELSEIIKDGWMKQSVN--GETYITKSMYFPGNEIPKWFRHQ 660
            +      L         P EL  +++     Q ++   E +    M   G+EIP WF   
Sbjct: 950  NPSKPCSLFASPAKWHFPKELESVLEKIQKLQKLHLPKERF---GMLLTGSEIPPWFSRS 1006

Query: 661  STGSTISLKTPQPTGYNKLMGFAFCVVVACSV--SECCRHE 699
             T S   +  P     N+ +GFA C ++   V   + C HE
Sbjct: 1007 KTVSFAKISVPDDCPMNEWVGFALCFLLVSYVVPPDVCSHE 1047


>gi|93005765|ref|YP_580202.1| hypothetical protein Pcryo_0937 [Psychrobacter cryohalolentis K5]
 gi|92393443|gb|ABE74718.1| Leucine-rich repeat, typical subtype [Psychrobacter cryohalolentis
           K5]
          Length = 757

 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 235/504 (46%), Gaps = 69/504 (13%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           LE+L++ Y   ++    SI  L  L    L+  K +  LP SI     LK+LV+     L
Sbjct: 40  LEVLEISYNDEISTIPESIGNLKSLVTFALEGSK-VKKLPNSIGELSKLKQLVISSNDKL 98

Query: 172 KNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
             LPK M +      L L G G+++LP S   LSN+  L I     L  +  S+  L+ L
Sbjct: 99  TELPKSMGNLENLEELQLRGNGLKKLPDSFGQLSNLIYLTINGNYNLTELPESLGGLENL 158

Query: 231 ESIR------------IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
           ES+             I +   L++L +     D     + P S   +K     ESL   
Sbjct: 159 ESLTLGYMGITKLPESIGQLSKLKYLTIE----DLENIIDLPES---IKDLGNLESLTLE 211

Query: 279 QCMFK----------SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
              FK          +LT+L I    N    P+ +GNL  L  L + G ++++LP+ +G+
Sbjct: 212 NSGFKKLPESIGQLLNLTNLTINYNNNITEFPESIGNLNILEYLSLGGNSVKKLPDSIGK 271

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
           L  L +L + N  +   I  SI  LK++ES+ +             + NI          
Sbjct: 272 LFSLRELNISNIEKSIDIPESIGNLKNLESLSLG------------YINI---------- 309

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                      + LP ++    SL SL I+D  KL  + + +  L+ LE L ++G   ++
Sbjct: 310 -----------KKLPENIFQLSSLLSLTIVDNMKLTEISENINKLKNLETLYLKGNNFKK 358

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P S+ QL+ L  L ++       +P  L    +L +L +   +   +LP+ + +L  L 
Sbjct: 359 LPSSIGQLSKLIDLSIEYTGKITEIPDSLVELNNLQNLTLCGME-IKKLPENMSHLSCLT 417

Query: 508 VLTI-KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
            LTI     + E PES+  + +LE L L++N+L+ + ES+N++ +L  L L++N+L+ +P
Sbjct: 418 NLTITHNRKLTEFPESVAGIKNLEILSLNENSLKTLSESINKMENLKYLYLASNSLKSLP 477

Query: 567 ERLDPLSSLKYLDLFENNLDRIPE 590
           + L  L  L+YL+L  N L+ +PE
Sbjct: 478 D-LSNLIKLEYLELDNNKLNSLPE 500



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
           KL  +E +EIS    +   PE          I  + S V    + SK++ LP+S+     
Sbjct: 36  KLIKLEVLEISYNDEISTIPE---------SIGNLKSLVTFALEGSKVKKLPNSIGELSK 86

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
           L  L I    KL  LP  +GNLE LEEL++ G G++++P S  QL+ L  L +    +  
Sbjct: 87  LKQLVISSNDKLTELPKSMGNLENLEELQLRGNGLKKLPDSFGQLSNLIYLTINGNYNLT 146

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSL 529
            LP  L   ++L SL  +      +LP+ IG L  LK LTI+    I ++PES+  L +L
Sbjct: 147 ELPESLGGLENLESL-TLGYMGITKLPESIGQLSKLKYLTIEDLENIIDLPESIKDLGNL 205

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           E L L ++  + +PES+ QL +L +L ++ NNN+   PE +  L+ L+YL L  N++ ++
Sbjct: 206 ESLTLENSGFKKLPESIGQLLNLTNLTINYNNNITEFPESIGNLNILEYLSLGGNSVKKL 265

Query: 589 PE 590
           P+
Sbjct: 266 PD 267


>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 1530

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 277/547 (50%), Gaps = 56/547 (10%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           + L  L +  +++ ++   +  L SLK +D++ +K+ +   D+S  +NLEIL++   + L
Sbjct: 424 DQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEILNIS-GNIL 482

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
            E  +S+  L KL+ LD+ R   LT + + I   ++L+ LV+   SN K           
Sbjct: 483 DEVPASVYQLRKLKKLDM-RSNMLTEISSEISKLEWLEILVV---SNNK----------- 527

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
                    +++LP S+  L N+ +L I   K L+ +S  IF+LQ LE++ I    NLQ 
Sbjct: 528 ---------LQDLPISVYKLGNLKKLEIEGNK-LKYVSPEIFQLQKLETL-IVSGNNLQG 576

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           +  P+   +  + KE  +   K+        L +  C  K L  L ++       +P  +
Sbjct: 577 I--PNALYNLRKLKELDARNNKIT------YLSAEICQLKQLQRL-VVSGNILHEIPTSI 627

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
             L+ L  + +   A+  LP+ + QL  L  L + +C++L  +   ++KLK ++ ++I N
Sbjct: 628 CKLKKLKEINVRSNALTSLPQEISQLTQLEVL-IVSCNKLPNVPPVVYKLKGLKKLDIGN 686

Query: 364 ------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE----SLPSSLCMFKSLT 413
                   ++    ++   N+  + ++ +  ++ +L +  +L+     + S L     L 
Sbjct: 687 NIISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQ 746

Query: 414 SLEIIDC--KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
            LE++D    KL+ LP  L  L++++EL V    I  +   L+QL  L K+ L   +   
Sbjct: 747 ELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKINLSH-NQMN 805

Query: 471 SLPSRLYVSKSLTSLEIID-CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           ++P+ +     L+ LE ++   N M     I +L++LK L I    ++EVP SL +L  L
Sbjct: 806 AVPAAI---NQLSQLEDLNMSNNNMTKLSGISHLKHLKKLNISFNQVQEVPFSLCKLHQL 862

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L ++ NN+  +PE++++L +L  L L +++L+ IP  L  LS LK LD+ +N+L +IP
Sbjct: 863 KVLNVASNNISTLPENISELHNLEELNLKSSSLQNIPSALGHLSKLKVLDIRDNHLGKIP 922

Query: 590 EYLRSFP 596
           + +++ P
Sbjct: 923 KPVQNLP 929



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 175/685 (25%), Positives = 314/685 (45%), Gaps = 127/685 (18%)

Query: 9   QINPYTFSKMTELRLLK--FCGSKNKCM----VHSLEGVPFTELRYFEWHQFP-----LK 57
           QI+  +F+K+     LK  + G  N       + +L+ +   ++   ++   P     LK
Sbjct: 20  QISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNIPSCVLKLK 79

Query: 58  TLNILHWE--NLVSLKMPGSKVTQLW-------------DDVQNLVSLKRIDLKYSKLLT 102
           +L IL  E  ++ SL    S++ QL              D V  L SL  +++  + + T
Sbjct: 80  SLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAVYKLKSLTELNVGNNLITT 139

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLK 161
               +S  QNLEIL +   ++L E  +++ +LNKL++LD+ R  +++S+ T I   K L 
Sbjct: 140 LSYSISQLQNLEILVVS-DNNLQEVPNNLYHLNKLKLLDI-RGNNISSIATEISKLKQLN 197

Query: 162 RLVLRGCSNLKNLP-------KMTSCHLRST--------------LPLLGVG---IEELP 197
            L++  C+NL+ +P       K+    +R                L +L V    +  +P
Sbjct: 198 TLIV-SCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIP 256

Query: 198 SSIKCLSNIGEL---------------------LIYSCKRLENISSSIFKLQFLESIRIH 236
           S I  L  + EL                     L  SC  LE I SSI+KL  L+ + + 
Sbjct: 257 SDIYQLRKLRELDVGSNDIRILPDISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQ 316

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPS-SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
                  +   S NI   RS E  + S  KL +      +P   C  K+L  L++ +   
Sbjct: 317 S----NSITSISTNISELRSLEMLNVSNNKLHE------IPPTVCKLKTLKKLDMGNNRI 366

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL-KNC-------------- 340
              LP E+  L  L  L+I G +++E+P  + QL +L++L++ KN               
Sbjct: 367 TSLLP-EIAQLNQLKSLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQ 425

Query: 341 --------SELEYISSSIFKLKSVESIEI------SNCSNLKGFPEIPFCNIDGSGIERI 386
                   +++E I +S+++LKS++ +++      S  +++     +   NI G+ ++ +
Sbjct: 426 LEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEILNISGNILDEV 485

Query: 387 PSSVLKLNKCSKLESLPSSLCMFKS-LTSLE-----IIDCKKLERLPDELGNLEALEELR 440
           P+SV +L K  KL+   + L    S ++ LE     ++   KL+ LP  +  L  L++L 
Sbjct: 486 PASVYQLRKLKKLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLE 545

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPD 498
           +EG  ++ V   + QL   +  +   ++ + +P+ LY   +L  L+ +D +N     L  
Sbjct: 546 IEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIPNALY---NLRKLKELDARNNKITYLSA 602

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           EI  L+ L+ L + G  + E+P S+ +L  L+ + +  N L  +P+ ++QL+ L  L +S
Sbjct: 603 EICQLKQLQRLVVSGNILHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEVLIVS 662

Query: 559 NNNLERIPERLDPLSSLKYLDLFEN 583
            N L  +P  +  L  LK LD+  N
Sbjct: 663 CNKLPNVPPVVYKLKGLKKLDIGNN 687



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 151/640 (23%), Positives = 280/640 (43%), Gaps = 123/640 (19%)

Query: 45  ELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           +L+ F+     + T+  +I   + L  L +  +K+  +  D+  L  L+ +D+  S  + 
Sbjct: 218 KLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSDIYQLRKLRELDVG-SNDIR 276

Query: 103 KLPDLSLAQNLEILDLG----------------------YCSSLTETHSSIQYLNKLEVL 140
            LPD+S  + LEIL+L                         +S+T   ++I  L  LE+L
Sbjct: 277 ILPDISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELRSLEML 336

Query: 141 DLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSI 200
           ++   K     PT    K LK+L +        LP++   +   +L + G  ++E+PSS+
Sbjct: 337 NVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQLNQLKSLVISGHSLQEIPSSV 396

Query: 201 KCLSNIGEL-----------------------LIYSCKRLENISSSIFKLQFLE------ 231
             L  + EL                       L+ S  ++E I +S+++L+ L+      
Sbjct: 397 YQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRK 456

Query: 232 ------SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
                 S  I +  NL+ L     NI G    E P+S  +L+K  +   L     M   +
Sbjct: 457 NKISSLSADISKLENLEIL-----NISGNILDEVPASVYQLRKLKK---LDMRSNMLTEI 508

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
           +S              E+  L+ L  L++    +++LP  + +L  L KLE++  ++L+Y
Sbjct: 509 SS--------------EISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEG-NKLKY 553

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPF----------------------CN------ 377
           +S  IF+L+ +E++ +S  +NL+G P   +                      C       
Sbjct: 554 VSPEIFQLQKLETLIVSG-NNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQR 612

Query: 378 --IDGSGIERIPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             + G+ +  IP+S+ KL K        + L SLP  +     L  L I+ C KL  +P 
Sbjct: 613 LVVSGNILHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEVL-IVSCNKLPNVPP 671

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
            +  L+ L++L +    I  +   + +L   ++     +  + +   +Y  + L  L++ 
Sbjct: 672 VVYKLKGLKKLDIGNNIISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQ 731

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
             K    LPD +  L+ L+VL I    ++E+P SL QL S++ L +  N +  +   L+Q
Sbjct: 732 HNKITSPLPD-VSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQ 790

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           L  L  + LS+N +  +P  ++ LS L+ L++  NN+ ++
Sbjct: 791 LKQLRKINLSHNQMNAVPAAINQLSQLEDLNMSNNNMTKL 830



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 232/506 (45%), Gaps = 81/506 (16%)

Query: 101 LTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
           L+ LPD +S  Q+L+ILD+   +      S +  L  L++LD++   S+TSLP  I    
Sbjct: 45  LSALPDKISTLQHLKILDISQ-NKFDNIPSCVLKLKSLKILDVE-GNSVTSLPPEISQLN 102

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLIYSCKR 216
               +   C+ +K +P   + +   +L  L VG   I  L  SI  L N+ E+L+ S   
Sbjct: 103 QLEKLNASCNQIKTVPD--AVYKLKSLTELNVGNNLITTLSYSISQLQNL-EILVVSDNN 159

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L+ + ++++ L             L+ L++   NI                      S+ 
Sbjct: 160 LQEVPNNLYHLN-----------KLKLLDIRGNNI---------------------SSIA 187

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
           +     K L +L I+ C N  ++P+++  L+ L +  + G  I  +   + +L  L  L 
Sbjct: 188 TEISKLKQLNTL-IVSCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEIL- 245

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP------FCNIDGSGIERIPSSV 390
           + + ++L  I S I++L+ +  +++   ++++  P+I         N+  + +E+IPSS+
Sbjct: 246 IVSSNKLHTIPSDIYQLRKLRELDVG-SNDIRILPDISQLKKLEILNLSCNHLEKIPSSI 304

Query: 391 LKLNKCSKLESLPSSLCMFKS----LTSLEIIDC--KKLERLPDELGNLEALEELRVEGT 444
            KL    +L    +S+    +    L SLE+++    KL  +P  +  L+ L++L +   
Sbjct: 305 YKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNN 364

Query: 445 GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNL 503
            I  +   +AQL   K  +    S + +PS +Y  K LT L++   KN +R +  ++ N 
Sbjct: 365 RITSLLPEIAQLNQLKSLVISGHSLQEIPSSVYQLKMLTELDV--GKNMIRCISSDMSN- 421

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
                                +L  LE LVLSDN ++ IP SL QL SL  L +  N + 
Sbjct: 422 ---------------------KLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKIS 460

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIP 589
            +   +  L +L+ L++  N LD +P
Sbjct: 461 SLSADISKLENLEILNISGNILDEVP 486



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 195/433 (45%), Gaps = 57/433 (13%)

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           L W  L  L +  +K+  L   V  L +LK+++++ +KL    P++   Q LE L +   
Sbjct: 515 LEW--LEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETL-IVSG 571

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGC------SNLKNL 174
           ++L    +++  L KL+ LD  R   +T L   I   K L+RLV+ G       +++  L
Sbjct: 572 NNLQGIPNALYNLRKLKELDA-RNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKL 630

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
            K+   ++RS        +  LP  I  L+ + E+LI SC +L N+   ++KL+ L+ + 
Sbjct: 631 KKLKEINVRSN------ALTSLPQEISQLTQL-EVLIVSCNKLPNVPPVVYKLKGLKKLD 683

Query: 235 I------------HRCPNLQFLEMPSCNIDGT-----RSKEQPSSELKLKKCPRPESLPS 277
           I            H    LQ L +    +        R ++    +L+  K   P  LP 
Sbjct: 684 IGNNIISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSP--LPD 741

Query: 278 GQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                  L  LE++D  +   + LP  L  L+++  L +    I  L   L QL  L K+
Sbjct: 742 ----VSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKI 797

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISN-----CSNLKGFPEIPFCNIDGSGIERIPSSV 390
            L + +++  + ++I +L  +E + +SN      S +     +   NI  + ++ +P S+
Sbjct: 798 NLSH-NQMNAVPAAINQLSQLEDLNMSNNNMTKLSGISHLKHLKKLNISFNQVQEVPFSL 856

Query: 391 LKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
            KL++        + + +LP ++    +L  L +     L+ +P  LG+L  L+ L +  
Sbjct: 857 CKLHQLKVLNVASNNISTLPENISELHNLEELNL-KSSSLQNIPSALGHLSKLKVLDIRD 915

Query: 444 TGIREVPKSLAQL 456
             + ++PK +  L
Sbjct: 916 NHLGKIPKPVQNL 928



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 2/186 (1%)

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
           + LC F +L +L  +    L  LPD++  L+ L+ L +       +P  + +L   K+  
Sbjct: 27  TKLCRFTNLKAL-YLGKNNLSALPDKISTLQHLKILDISQNKFDNIPSCVLKLKSLKILD 85

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            + +S  SLP  +     L  L    C     +PD +  L+ L  L +    I  +  S+
Sbjct: 86  VEGNSVTSLPPEISQLNQLEKLNA-SCNQIKTVPDAVYKLKSLTELNVGNNLITTLSYSI 144

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            QL +LE LV+SDNNLQ +P +L  L+ L  L +  NN+  I   +  L  L  L +  N
Sbjct: 145 SQLQNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSCN 204

Query: 584 NLDRIP 589
           NL +IP
Sbjct: 205 NLRKIP 210



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 88/168 (52%), Gaps = 9/168 (5%)

Query: 433 LEALEELRVEGTGIREVPKSLAQLALSKL----KLKKC----SSFESLPSRLYVSKSLTS 484
           +++LE+       I    K +++++ +KL     LK      ++  +LP ++   + L  
Sbjct: 1   MDSLEKYDASAEEIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKI 60

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L+I   K F  +P  +  L+ LK+L ++G ++  +P  + QL+ LE L  S N ++ +P+
Sbjct: 61  LDISQNK-FDNIPSCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPD 119

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           ++ +L SL  L + NN +  +   +  L +L+ L + +NNL  +P  L
Sbjct: 120 AVYKLKSLTELNVGNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNL 167


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 173/380 (45%), Gaps = 36/380 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWEN 66
           E   NP  FSKM  L+LL      N  +    + +P   LR+ +W  +P K L      N
Sbjct: 554 EAHWNPEAFSKMCNLKLLDI---DNLRLSVGPKYLP-NALRFLKWSWYPSKFLPPGFQPN 609

Query: 67  -LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            L  L +P SK+  LW+ ++    LK IDL YS+ LT+ PD +  QNLE L L  C++L 
Sbjct: 610 ELTELSLPHSKIDYLWNGIKYFRKLKSIDLSYSQNLTRTPDFTGLQNLERLVLEGCTNLV 669

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-S 184
           E H SI  L  L +L+   CKS+  LP  +  + L+   L GCS +K +P+        S
Sbjct: 670 EIHPSIASLKCLRILNFRNCKSIKILPNEVKMETLEVFDLSGCSKVKKIPEFGGQMKNVS 729

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC----PN 240
            L L G  +EELP S K L    E L  +   +    SSI  ++ L+    H C    P 
Sbjct: 730 KLYLGGTAVEELPLSFKGLIESLEELDLTGISIREPLSSIGPMKNLDLSSFHGCNGPPPQ 789

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM-----FKSLTSLEIIDCPN 295
            +F  +PS                     PR    P    +     F+SL  L++ DC  
Sbjct: 790 PRFSFLPSGLF------------------PRNSLSPVNLVLASLKDFRSLKKLDLSDCNL 831

Query: 296 FE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            +  LP+++G L +L  L + G     LP  +G L+ LS   L NC  L+ +      L 
Sbjct: 832 CDGALPEDIGCLSSLKELNLGGNNFVSLPTSIGCLSKLSFFNLNNCKRLQQLPD--LPLN 889

Query: 355 SVESIEISNCSNLKGFPEIP 374
           +   ++  NC++L+  P  P
Sbjct: 890 NRIYLKTDNCTSLQMLPGPP 909



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 55/317 (17%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           + L +G   F+ L S+++    N  R PD  G LQ L RL+++G T + E+   +  L  
Sbjct: 622 DYLWNGIKYFRKLKSIDLSYSQNLTRTPDFTG-LQNLERLVLEGCTNLVEIHPSIASLKC 680

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L  L  +NC  ++ + + + K++++E  ++S CS +K  PE       G  ++ +    L
Sbjct: 681 LRILNFRNCKSIKILPNEV-KMETLEVFDLSGCSKVKKIPEF------GGQMKNVSKLYL 733

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
                + +E LP S   FK L                    +E+LEEL + G  IRE   
Sbjct: 734 G---GTAVEELPLS---FKGL--------------------IESLEELDLTGISIREPLS 767

Query: 452 SLAQLA-LSKLKLKKCSS------FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           S+  +  L       C+       F  LPS L+   SL+ + ++           + +  
Sbjct: 768 SIGPMKNLDLSSFHGCNGPPPQPRFSFLPSGLFPRNSLSPVNLVLAS--------LKDFR 819

Query: 505 YLKVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NN 561
            LK L +    +    +PE +G LSSL+ L L  NN   +P S+  LS L    L+N   
Sbjct: 820 SLKKLDLSDCNLCDGALPEDIGCLSSLKELNLGGNNFVSLPTSIGCLSKLSFFNLNNCKR 879

Query: 562 LERIPERLDPLSSLKYL 578
           L+++P+   PL++  YL
Sbjct: 880 LQQLPDL--PLNNRIYL 894


>gi|296089376|emb|CBI39195.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 157/292 (53%), Gaps = 15/292 (5%)

Query: 18  MTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPG 74
           MT+LRLL+   ++ +C VH      F   ELR   W  +PLK L+     +NLV L MP 
Sbjct: 1   MTKLRLLRIDDTQMQCEVHIPHDFKFHFDELRCLVWCHYPLKLLSSDFECKNLVCLSMPN 60

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S +TQLW+  +   +LK +DL +S+ LT+ PD S   NL++L L  C+ L + H S+  L
Sbjct: 61  SHLTQLWEGNKVFENLKYMDLSHSQYLTETPDFSRVTNLKMLILDGCTQLCKIHPSLGDL 120

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVG 192
           +KL  L L  C +L   P+      L+ L+L GCS L+  P +   H+     L L G  
Sbjct: 121 DKLARLSLKNCINLEHFPSIGQLVSLEDLILSGCSKLEKFPDIFQ-HMPCLWKLCLDGTA 179

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
             ELPSSI   + +  L + +C++L ++ SSI KL  LE++ +  C +L   E+ S N+D
Sbjct: 180 TTELPSSIGYATELVRLGLKNCRKLRSLPSSIGKLTLLETLSLSGCSDLGKCEVNSGNLD 239

Query: 253 G-TRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
              R+ +Q  S   L+L+ C    +LP+        +SLEII+  N E L D
Sbjct: 240 ALPRTLDQLCSLWRLELQNCRSLRALPALP------SSLEIINASNCESLED 285



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 186/427 (43%), Gaps = 66/427 (15%)

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKK 465
           +F++L  +++   + L   PD    +  L+ L ++G T + ++  SL  L  L++L LK 
Sbjct: 72  VFENLKYMDLSHSQYLTETPD-FSRVTNLKMLILDGCTQLCKIHPSLGDLDKLARLSLKN 130

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           C + E  PS +    SL  L +  C    + PD   ++  L  L + GTA  E+P S+G 
Sbjct: 131 CINLEHFPS-IGQLVSLEDLILSGCSKLEKFPDIFQHMPCLWKLCLDGTATTELPSSIGY 189

Query: 526 LSSLEWLVLSD-NNLQIIPESLNQL-----------SSLVSLKLSNNNLERIPERLDPLS 573
            + L  L L +   L+ +P S+ +L           S L   ++++ NL+ +P  LD L 
Sbjct: 190 ATELVRLGLKNCRKLRSLPSSIGKLTLLETLSLSGCSDLGKCEVNSGNLDALPRTLDQLC 249

Query: 574 SLKYLDLFE-NNLDRIPEYLRSF---------------PTSIPSEFTSLRLSVDLRNCLK 617
           SL  L+L    +L  +P    S                P ++ S+F S        NCLK
Sbjct: 250 SLWRLELQNCRSLRALPALPSSLEIINASNCESLEDISPQAVFSQFRSCMFG----NCLK 305

Query: 618 L---------DPNELS-----EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG 663
           L         D   ++     EI    + +Q  N E  +  S  FPG+ IP WF H+S G
Sbjct: 306 LTKFQSRMERDLQSMAAPVDHEIQPSTFEEQ--NPEVPVLFSTVFPGSGIPDWFEHRSEG 363

Query: 664 STISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDS 723
             I+++  Q    +  +GFA   VVA              D  C   +     +S G  S
Sbjct: 364 HEINIQVSQNWYTSNFLGFALSAVVAPEKEPLTSGWKTYCDLGCGAPNS--KLKSNGIFS 421

Query: 724 YT----SSYLGKISHVESDHVFLG---SSI-FAGEN-SCKRSDEFFFHIDRSCCEVKKCG 774
           ++    S+ L +   + SDH +L    S I FA E  SC +   F F  DR  C VK CG
Sbjct: 422 FSIVDDSTELLEHITIGSDHWWLAYVPSFIGFAPEKWSCIK---FSFRTDRESCIVKCCG 478

Query: 775 IHFVHAQ 781
           +  V+ +
Sbjct: 479 VCPVYTK 485



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 118/242 (48%), Gaps = 40/242 (16%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
           L  G  +F++L  +++         PD    +  L  LI+DG T + ++   LG L  L+
Sbjct: 66  LWEGNKVFENLKYMDLSHSQYLTETPD-FSRVTNLKMLILDGCTQLCKIHPSLGDLDKLA 124

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIER 385
           +L LKNC  LE+  S I +L S+E + +S CS L+ FP+I          C +DG+    
Sbjct: 125 RLSLKNCINLEHFPS-IGQLVSLEDLILSGCSKLEKFPDIFQHMPCLWKLC-LDGTATTE 182

Query: 386 IPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           +PSS+        L L  C KL SLPSS+     L +L +  C  L +     GNL+AL 
Sbjct: 183 LPSSIGYATELVRLGLKNCRKLRSLPSSIGKLTLLETLSLSGCSDLGKCEVNSGNLDAL- 241

Query: 438 ELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
                       P++L QL +L +L+L+ C S  +LP+        +SLEII+  N   L
Sbjct: 242 ------------PRTLDQLCSLWRLELQNCRSLRALPAL------PSSLEIINASNCESL 283

Query: 497 PD 498
            D
Sbjct: 284 ED 285



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 28/215 (13%)

Query: 228 QFL-ESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPS-GQCM 281
           Q+L E+    R  NL+ L +  C     I  +       + L LK C   E  PS GQ +
Sbjct: 85  QYLTETPDFSRVTNLKMLILDGCTQLCKIHPSLGDLDKLARLSLKNCINLEHFPSIGQLV 144

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             SL  L +  C   E+ PD   ++  L +L +DGTA  ELP  +G    L +L LKNC 
Sbjct: 145 --SLEDLILSGCSKLEKFPDIFQHMPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCR 202

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKL 393
           +L  + SSI KL  +E++ +S CS+L        C ++   ++ +P ++        L+L
Sbjct: 203 KLRSLPSSIGKLTLLETLSLSGCSDLGK------CEVNSGNLDALPRTLDQLCSLWRLEL 256

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             C  L +LP+        +SLEII+    E L D
Sbjct: 257 QNCRSLRALPA------LPSSLEIINASNCESLED 285


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 300/632 (47%), Gaps = 92/632 (14%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSL 124
           +L  L + G+++T + +++  L ++  + L  ++L T LP ++   ++LE+L LG  + L
Sbjct: 289 SLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQL-TSLPVEIGQLRSLEMLQLG-GNQL 346

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLP------TSIHSKYLKRLVLRGC-SNLKNLPKM 177
           T   + I+ L  L+ LDL+  + LTS+P      TS+ S +L +  L    + +  L  M
Sbjct: 347 TSVPAEIRQLTSLKCLDLNNNQ-LTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAM 405

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           T  +L +        +  LP+ I  L+ + EL +Y   +L ++ + I +L+ L  + +  
Sbjct: 406 TELYLNAN------QLTSLPAEIWQLTPLTELYLYG-NQLTSVPAEIGQLRSLTELNLSS 458

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPS-SELKLKKCP----RPESLPSGQCMFKSLTSL--EI 290
               Q   +P+  I   RS+ +   S  +L   P    +  SL         LTS+  EI
Sbjct: 459 N---QLTNVPA-EIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEI 514

Query: 291 IDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
               + ERL          P E+G L+AL  L + G  +  +P  +GQL  L KL+L++ 
Sbjct: 515 GRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQH- 573

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC---- 396
           ++L  +   + +L S+ S+ + N                 + +  +P+ + +L       
Sbjct: 574 NQLTSVPVEVGQLTSLMSLNLGN-----------------NRLTSVPAEIGQLTSLWELW 616

Query: 397 ---SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
              ++L S+P+ +    SL  L +    +L  +P E+G L +L+ L + G  +  VP  +
Sbjct: 617 LHDNELTSVPAEIWQLTSLRELSLA-VNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEI 675

Query: 454 AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLT 510
            QL +L  L L   +   S+P+ +   + LTSLE ++  +      P+EIG L  LK LT
Sbjct: 676 GQLTSLETLDLDD-NKLTSVPADIL--QQLTSLESLELGDNHLTSWPEEIGQLTSLKELT 732

Query: 511 IKGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           ++G  +   VP  +GQL+SL+ L L  N L  +P  + QL+SL  L L++N L  +P  L
Sbjct: 733 LRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAEL 792

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
             L+SL+ L L  N L  +P  +R        E  +    VDL + + +D  + +  ++ 
Sbjct: 793 GQLTSLEGLWLKGNQLTIVPAEIR--------ELKAAGCRVDLDDGVTMDEGDDARALRT 844

Query: 630 GW--MKQSVNGETYITKSMYFPGNEIPK-WFR 658
            W  M   + G         +P +E P+ W+R
Sbjct: 845 -WRAMCPDLQG--------MWPEDEQPEDWYR 867



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 267/574 (46%), Gaps = 69/574 (12%)

Query: 59   LNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            L  L W     L + G+++T +  +V  L SL+++DL++++L +   ++    +L  L+L
Sbjct: 540  LRALEW-----LYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNL 594

Query: 119  GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP--- 175
            G  + LT   + I  L  L  L L     LTS+P  I      R +    + L ++P   
Sbjct: 595  GN-NRLTSVPAEIGQLTSLWELWL-HDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEI 652

Query: 176  -KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
             ++TS     TL L G  +  +P+ I  L+++ E L     +L ++ + I  LQ L S+ 
Sbjct: 653  GQLTSLK---TLELGGNQLTSVPAEIGQLTSL-ETLDLDDNKLTSVPADI--LQQLTSLE 706

Query: 235  IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID-- 292
                 +      P      T  KE     L L+      S+P+       LTSL+ +D  
Sbjct: 707  SLELGDNHLTSWPEEIGQLTSLKE-----LTLRGNKLTTSVPA---EIGQLTSLKTLDLR 758

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C     +P E+G L +L  L ++   +  +P  LGQL  L  L LK  ++L  + + I +
Sbjct: 759  CNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKG-NQLTIVPAEIRE 817

Query: 353  LKSVE-SIEISN-------------------CSNLKG-FPE---------IPFCNIDGSG 382
            LK+    +++ +                   C +L+G +PE         +   N DG  
Sbjct: 818  LKAAGCRVDLDDGVTMDEGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMEN-DGRV 876

Query: 383  IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            ++      L+L       ++P+ L    +L  L +    ++  LP E+G L +LE L + 
Sbjct: 877  VQ------LELEVFGLTGAVPAELGRLSALRWLSL-HGNQVTSLPAEIGQLTSLEVLYLT 929

Query: 443  GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
               +  VP  + QL +L +L L + +   S+P+ +    +L  LE+ D +    LP EIG
Sbjct: 930  ENQLTSVPAEIGQLTSLRELYLYE-NQLTSVPAEIGQLTALARLELRDNQ-LTSLPAEIG 987

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
             L  L+ L++    +  VP  +GQL+SL+ L LSDN L  +P  + QL+SL  L+L  N 
Sbjct: 988  QLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQ 1047

Query: 562  LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            L  +PE +  L+SL+ L L++N L  +P  +R  
Sbjct: 1048 LTSVPEEIGQLTSLQGLYLWQNRLTSVPAAIREL 1081



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 247/545 (45%), Gaps = 91/545 (16%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-----FLESIRIHRCP----N 240
           G  +  +P+ I  L+++ EL + S  RL ++   I +L      +L + ++   P     
Sbjct: 274 GNALTSVPAEIGLLTSLRELWL-SGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQ 332

Query: 241 LQFLEMPSCNIDGTRSKEQPSS--ELKLKKC-----PRPESLPSGQCMFKSLTSLEIIDC 293
           L+ LEM    + G +    P+   +L   KC      +  S+P+      SL SL +   
Sbjct: 333 LRSLEM--LQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKN 390

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
                +P E+G L A+  L ++   +  LP  + QL  L++L L   ++L  + + I +L
Sbjct: 391 -QLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYG-NQLTSVPAEIGQL 448

Query: 354 KSVESIEISNCSNLKGFP-EIPFC------NIDGSGIERIPSSVLKLNKC-------SKL 399
           +S+  + +S+ + L   P EI          + G+ +  +P+ + +L          ++L
Sbjct: 449 RSLTELNLSS-NQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQL 507

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-AL 458
            S+P+ +    SL  L + D  KL  +P E+G L ALE L + G  +  VP  + QL +L
Sbjct: 508 TSVPAEIGRLTSLERLWLED-NKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSL 566

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            KL L+  +   S+P  +    SL SL + + +    +P EIG L  L  L +    +  
Sbjct: 567 EKLDLQH-NQLTSVPVEVGQLTSLMSLNLGNNR-LTSVPAEIGQLTSLWELWLHDNELTS 624

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           VP  + QL+SL  L L+ N L  +P  + QL+SL +L+L  N L  +P  +  L+SL+ L
Sbjct: 625 VPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETL 684

Query: 579 DLFENNLDRIP-----------------EYLRSFP--------------------TSIPS 601
           DL +N L  +P                  +L S+P                    TS+P+
Sbjct: 685 DLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPA 744

Query: 602 E---FTSLRLSVDLR-NCLKLDPNELSEIIKDGWMKQSVN---------GETYITKSMYF 648
           E    TSL+ ++DLR N L   P E+ ++    W+  + N         G+    + ++ 
Sbjct: 745 EIGQLTSLK-TLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWL 803

Query: 649 PGNEI 653
            GN++
Sbjct: 804 KGNQL 808



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 13/194 (6%)

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           +P E+G L AL EL V G  +  VP  +  L   +      +   S+P  +    ++T L
Sbjct: 257 VPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTEL 316

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
             ++      LP EIG L  L++L + G  +  VP  + QL+SL+ L L++N L  +P  
Sbjct: 317 -YLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAE 375

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP--------- 596
           + QL+SL+SL L  N L  +P  +  L+++  L L  N L  +P  +             
Sbjct: 376 IGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYG 435

Query: 597 ---TSIPSEFTSLR 607
              TS+P+E   LR
Sbjct: 436 NQLTSVPAEIGQLR 449



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 216/520 (41%), Gaps = 125/520 (24%)

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-----DLSLAQNLEILD--- 117
            +L +L++ G+++T +  ++  L SL+ +DL  +KL T +P      L+  ++LE+ D   
Sbjct: 657  SLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKL-TSVPADILQQLTSLESLELGDNHL 715

Query: 118  ------LGYCSSL-----------TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
                  +G  +SL           T   + I  L  L+ LDL RC  LTS+P  I     
Sbjct: 716  TSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDL-RCNQLTSVPAEIGQLTS 774

Query: 161  KRLVLRGCSNLKNLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
             R +    + L ++P    ++TS      L L G  +  +P+ I+ L   G      C+ 
Sbjct: 775  LRWLWLNDNRLTSVPAELGQLTSLE---GLWLKGNQLTIVPAEIRELKAAG------CRV 825

Query: 217  LENISSSIFKLQFLESIRIHR--CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
              +   ++ +     ++R  R  CP+LQ +  P          EQP    ++        
Sbjct: 826  DLDDGVTMDEGDDARALRTWRAMCPDLQGM-WPE--------DEQPEDWYRVTMEN---- 872

Query: 275  LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
               G+ +   L    +        +P ELG L AL  L + G  +  LP  +GQL  L  
Sbjct: 873  --DGRVVQLELEVFGLTGA-----VPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEV 925

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
            L L   ++L  + + I +L S+  + +                                 
Sbjct: 926  LYLTE-NQLTSVPAEIGQLTSLRELYLYE------------------------------- 953

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              ++L S+P+ +    +L  LE+ D  +L  LP E+G L ALE+L ++   +  VP  + 
Sbjct: 954  --NQLTSVPAEIGQLTALARLELRD-NQLTSLPAEIGQLAALEKLSLDSNQLTSVPAEIG 1010

Query: 455  QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM--RLPDEIGNLEYLKVLTIK 512
            Q                          LTSL+ +   + M   +P +IG L  LK L + 
Sbjct: 1011 Q--------------------------LTSLKTLGLSDNMLTSVPADIGQLTSLKELRLG 1044

Query: 513  GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
            G  +  VPE +GQL+SL+ L L  N L  +P ++ +L ++
Sbjct: 1045 GNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAAIRELRAV 1084



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 15/131 (11%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           +P E+G L  L+ L + G A+  VP  +G L+SL  L LS N L  +PE + QL+++  L
Sbjct: 257 VPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTEL 316

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
            L+ N L  +P  +  L SL+ L L  N L  +P  +R        + TSL+       C
Sbjct: 317 YLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIR--------QLTSLK-------C 361

Query: 616 LKLDPNELSEI 626
           L L+ N+L+ +
Sbjct: 362 LDLNNNQLTSV 372


>gi|15230522|ref|NP_190724.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana]
 gi|332645285|gb|AEE78806.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1253

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 157/600 (26%), Positives = 247/600 (41%), Gaps = 140/600 (23%)

Query: 10   INPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHW 64
            +NP  F  M  LR LK C S   N   +H  +GV     ELR   W  FPL +L    + 
Sbjct: 509  VNPMAFENMYNLRYLKICSSNPGNHYALHLPKGVKSLPEELRLLHWEHFPLLSLPQDFNT 568

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
             NLV L M  SK+ +LW+  + L  LKRI L +S+ L  + +L +A N+E          
Sbjct: 569  RNLVILNMCYSKLQRLWEGTKELGMLKRIMLCHSQQLVGIQELQIALNME---------- 618

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                          V+DL  C  L     + H ++L+ + L GC  +K+ P         
Sbjct: 619  --------------VIDLQGCARLQRFLATGHFQHLRVINLSGCIKIKSFP--------- 655

Query: 185  TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                      E+P       NI EL                   +L+   I   P + F 
Sbjct: 656  ----------EVPP------NIEEL-------------------YLKQTGIRSIPTVTFS 680

Query: 245  EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
               +  I   +  +  + E+         S      +   L +L+++D      L D  G
Sbjct: 681  PQDNSFIYDHKDHKFLNREV--------SSDSQSLSIMVYLDNLKVLDLSQCLELEDIQG 732

Query: 305  NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
              + L +L + GTAI+ELP  L  L+ L  L+L+NC  L  +   I  L S+  + +S C
Sbjct: 733  IPKNLRKLYLGGTAIKELPS-LMHLSELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGC 791

Query: 365  SNLKGFPEIPF----CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
            S L+    IP       + G+ I+ + S +  L++                L  L++ +C
Sbjct: 792  SELEDIQGIPRNLEELYLAGTAIQEVTSLIKHLSE----------------LVVLDLQNC 835

Query: 421  KKLERLPDELGNLEALEELRV---EGTGIREVPKSLAQLALSKLKLKK------------ 465
            K+L+ LP E+ NL++L  L++    G  IREV  S+ Q  +S++ +              
Sbjct: 836  KRLQHLPMEISNLKSLVTLKLTDPSGMSIREVSTSIIQNGISEIGISNLNYLLLTFNENA 895

Query: 466  -------------CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
                          SS   L  R Y   +L SL + +  + M +P+EI +L  + +L + 
Sbjct: 896  EQRREYLPRPRLPSSSLHGLVPRFY---ALVSLSLFNA-SLMHIPEEICSLPSVVLLDLG 951

Query: 513  GTAIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLS--SLVSLKLSNNNLERIP 566
                 ++PES+ QLS L  L L        L  +P+SL  L+    VSL+  +   E+ P
Sbjct: 952  RNGFSKIPESIKQLSKLHSLRLRHCRNLILLPALPQSLKLLNVHGCVSLESVSWGFEQFP 1011



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 170/386 (44%), Gaps = 113/386 (29%)

Query: 328 QLAL-LSKLELKNCSELE-YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID-----G 380
           Q+AL +  ++L+ C+ L+ ++++  F+   +  I +S C  +K FPE+P  NI+      
Sbjct: 612 QIALNMEVIDLQGCARLQRFLATGHFQ--HLRVINLSGCIKIKSFPEVP-PNIEELYLKQ 668

Query: 381 SGIERIPS----------------------------------------SVLKLNKCSKLE 400
           +GI  IP+                                         VL L++C +LE
Sbjct: 669 TGIRSIPTVTFSPQDNSFIYDHKDHKFLNREVSSDSQSLSIMVYLDNLKVLDLSQCLELE 728

Query: 401 SLPS-------------------SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            +                     SL     L  L++ +CK+L +LP  +GNL +L  L +
Sbjct: 729 DIQGIPKNLRKLYLGGTAIKELPSLMHLSELVVLDLENCKRLHKLPMGIGNLSSLAVLNL 788

Query: 442 EGTG----IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            G      I+ +P++L +L L+   +++ +S     S L V      L++ +CK    LP
Sbjct: 789 SGCSELEDIQGIPRNLEELYLAGTAIQEVTSLIKHLSELVV------LDLQNCKRLQHLP 842

Query: 498 DEIGNLEYLKVLTI---KGTAIREVPESLGQ-------LSSLEWLVLSDN-----NLQII 542
            EI NL+ L  L +    G +IREV  S+ Q       +S+L +L+L+ N       + +
Sbjct: 843 MEISNLKSLVTLKLTDPSGMSIREVSTSIIQNGISEIGISNLNYLLLTFNENAEQRREYL 902

Query: 543 PE------SLNQL----SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           P       SL+ L     +LVSL L N +L  IPE +  L S+  LDL  N   +IPE +
Sbjct: 903 PRPRLPSSSLHGLVPRFYALVSLSLFNASLMHIPEEICSLPSVVLLDLGRNGFSKIPESI 962

Query: 593 RSFPTSIPSEFTSLRLSVDLRNCLKL 618
           +       S+  SLR    LR+C  L
Sbjct: 963 KQL-----SKLHSLR----LRHCRNL 979


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 185/355 (52%), Gaps = 30/355 (8%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P+ L  L  L +LI+    I E+PE L +L  L++L L + +++  I  ++ KL ++  
Sbjct: 118 IPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQLNL-SYNQITEIPEALAKLTNLTQ 176

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPS 404
           + +S  + +   PE       +   N+ G+    IP ++ KL   ++L         +P 
Sbjct: 177 LNLS-YNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPE 235

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
           +L    +LT L I+   +++ +P+ +  L  L  L + G  I+E+P+++A+L  L++L L
Sbjct: 236 ALAKLTNLTQL-ILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGL 294

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +  + +P  +    +LT L + D      +P+ I  L  L  L + G  I+E+PE++
Sbjct: 295 D-GNQIKEIPEAIAKLTNLTQLGL-DGNQIKEIPEAITKLTNLTHLILSGNQIKEIPETI 352

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            +L++L  L LS N +  IPE L QL++L  L LS+N + +IPE L PL++L  L L  N
Sbjct: 353 AKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAPLTNLTTLHLRVN 412

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLR-NCLKLDPNELSEIIKDGWMKQSVN 637
            + +IPE + S P         L L +DLR N L + P  L  + + G +++  N
Sbjct: 413 QITQIPEAIESLP--------KLEL-LDLRGNPLPISPEILGSVYQVGSVEEIFN 458



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 155/327 (47%), Gaps = 38/327 (11%)

Query: 299 LPDELGNLQALNRLIID------------------GTAIRELPEGLGQLALLSKLELKNC 340
           LP E+G LQ L  LI+                   G  ++ LP  L  L  L KL++ + 
Sbjct: 31  LPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELLSLPNLRKLDI-SG 89

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCN-----IDGSGIERIPSSVLKL 393
           + LE I   + ++  +E + +     L   PE      N     +  + I  IP ++ KL
Sbjct: 90  NPLEGIPDVVMQILHLEELILIRVQ-LTEIPEALAKLTNLTQLILSDNQITEIPEALAKL 148

Query: 394 NKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
              ++L         +P +L    +LT L  +   ++  +P+ L  L  L +L + G   
Sbjct: 149 TNLTQLNLSYNQITEIPEALAKLTNLTQLN-LSYNQITEIPEALAKLTNLTQLNLRGNQR 207

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
            E+P++LA+L  L++L L      E +P  L    +LT L I+       +P+ I  L  
Sbjct: 208 TEIPEALAKLTNLTRLNLSYNQRTE-IPEALAKLTNLTQL-ILSDNQIKEIPETIAKLTN 265

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L  L + G  I+E+PE++ +L++L  L L  N ++ IPE++ +L++L  L L  N ++ I
Sbjct: 266 LTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEI 325

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYL 592
           PE +  L++L +L L  N +  IPE +
Sbjct: 326 PEAITKLTNLTHLILSGNQIKEIPETI 352



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 18/231 (7%)

Query: 418 IDCKKLERLPDELGNLEALEELRV--EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
           +  ++L  LP E+G L+ LE L +  +  G  +V   + Q AL        ++ ++LP  
Sbjct: 23  LSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALG-------NNLKTLPIE 75

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L    +L  L+I        +PD +  + +L+ L +    + E+PE+L +L++L  L+LS
Sbjct: 76  LLSLPNLRKLDI-SGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILS 134

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           DN +  IPE+L +L++L  L LS N +  IPE L  L++L  L+L  N +  IPE L   
Sbjct: 135 DNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKL 194

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
                +  T L L  + R  +   P  L+++     +  S N  T I +++
Sbjct: 195 -----TNLTQLNLRGNQRTEI---PEALAKLTNLTRLNLSYNQRTEIPEAL 237



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 171/366 (46%), Gaps = 69/366 (18%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           NL  L +  +++T++ + +  L +L +++L Y+++ T++P+ L+   NL  L+L Y + +
Sbjct: 127 NLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQI-TEIPEALAKLTNLTQLNLSY-NQI 184

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           TE   ++  L  L  L+L R    T +P ++             + L NL ++   + + 
Sbjct: 185 TEIPEALAKLTNLTQLNL-RGNQRTEIPEAL-------------AKLTNLTRLNLSYNQR 230

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCP 239
           T         E+P ++  L+N+ +L I S  +++ I  +I KL  L  +     +I   P
Sbjct: 231 T---------EIPEALAKLTNLTQL-ILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIP 280

Query: 240 N--LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
               +   +    +DG + KE P +  KL                 +LT L + D    +
Sbjct: 281 ETIAKLTNLTQLGLDGNQIKEIPEAIAKLT----------------NLTQLGL-DGNQIK 323

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+ +  L  L  LI+ G  I+E+PE + +L  L++L L + +++  I   + +L ++ 
Sbjct: 324 EIPEAITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLAL-SSNQITEIPEVLAQLTNLT 382

Query: 358 SIEISNCSNLKGFPE--IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            + +S  + +   PE   P  N+          + L L + +++  +P ++   +SL  L
Sbjct: 383 QLFLS-SNQITQIPEALAPLTNL----------TTLHL-RVNQITQIPEAI---ESLPKL 427

Query: 416 EIIDCK 421
           E++D +
Sbjct: 428 ELLDLR 433


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 234/482 (48%), Gaps = 55/482 (11%)

Query: 168 CSNLKNLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           C+ L +LP    ++TS      L L G G+  LP+ I  L+++  LLI     L ++ + 
Sbjct: 5   CNQLTSLPAEIGQLTSL---KELRLHGNGLTSLPAEIGQLTSL-TLLILDHDELTSLPAE 60

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           I +L  L  + +      Q   +P+          Q +S +KL      E  PS   + +
Sbjct: 61  IGQLASLVELDLSYN---QLTSLPA-------EIGQLTSLVKLDLTTWLEEPPS---LLE 107

Query: 284 SLTSLEI-IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            L S E+ +       LP E+G L +L  L ++   + ELP  +GQLA L +L L N + 
Sbjct: 108 ELDSWELNLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGN-NR 166

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-KLES 401
           L  + + I +L S+  + + + + L   P         + I ++ +S+ +LN C+ +L S
Sbjct: 167 LTSLPAEIGQLTSLVELNLDDNTPLTELP---------AEIGQL-TSLRELNLCNNRLTS 216

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSK 460
           LP+ +    SL  L  +   +L  LP E+G L +L EL +    +  VP  + QL +L +
Sbjct: 217 LPAEIGQLTSLKRL-FLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKR 275

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L + +   SLP+ +    SL  L++   K    LP EIG LE L+ L + G  +R VP
Sbjct: 276 LFLHR-NQLTSLPAEIGQLTSLVKLDLTTNK-LTSLPAEIGQLESLRELRLSGNQLRSVP 333

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
             +GQL+SL  L L +N L  +P  + QL+SLV L L  N+L  +P  +  L+SLK L L
Sbjct: 334 AEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFL 393

Query: 581 FENNLDRIPEYLRSFPT------------SIPSE---FTSL-RLSVDLRNCLKLDPNELS 624
             N L  +P  +    +            S+P+E    TSL RL +D RN L   P E+ 
Sbjct: 394 HRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLD-RNQLTSVPAEIG 452

Query: 625 EI 626
           ++
Sbjct: 453 QL 454



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 223/512 (43%), Gaps = 77/512 (15%)

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG-IEELPSSIKC 202
           C  LTSLP  I     LK L L G + L +LP         TL +L    +  LP+ I  
Sbjct: 5   CNQLTSLPAEIGQLTSLKELRLHG-NGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQ 63

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
           L+++ EL   S  +L ++ + I +L  L  + +       +LE P   ++     E  S 
Sbjct: 64  LASLVEL-DLSYNQLTSLPAEIGQLTSLVKLDLTT-----WLEEPPSLLE-----ELDSW 112

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           EL L    R  SLP+      SL  L + +      LP E+G L +L  L +    +  L
Sbjct: 113 ELNLGNN-RLTSLPAEIGQLTSLVELNL-EHNKLTELPAEIGQLASLVELNLGNNRLTSL 170

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLK-- 368
           P  +GQL  L +L L + + L  + + I +L S+  +            EI   ++LK  
Sbjct: 171 PAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRL 230

Query: 369 -----GFPEIPF----------CNIDGSGIERIPSSVLKLNKC-------SKLESLPSSL 406
                    +P            N+  + +  +P+ + +L          ++L SLP+ +
Sbjct: 231 FLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEI 290

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKK 465
               SL  L++    KL  LP E+G LE+L ELR+ G  +R VP  + QL +L+ L L  
Sbjct: 291 GQLTSLVKLDLT-TNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGN 349

Query: 466 CSSFESLPSRLYVSKSLTSL------------EIIDCKNFMRL----------PDEIGNL 503
            +   S+P+ +    SL  L            EI    +  RL          P EIG L
Sbjct: 350 -NQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQL 408

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
             L++L + G  +  VP   GQL+SL+ L+L  N L  +P  + QL+SL  L L  N L 
Sbjct: 409 TSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLT 468

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            +P  +  L+SL  L L  N L  +P  +R  
Sbjct: 469 SVPAEIGQLTSLWTLHLGGNQLTSLPAAIRDL 500



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 243/554 (43%), Gaps = 91/554 (16%)

Query: 43  FTELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
            T L+    H   L +L   I    +L  L +   ++T L  ++  L SL  +DL Y++L
Sbjct: 18  LTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLASLVELDLSYNQL 77

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
            T LP   + Q   ++ L   + L E  S ++ L+  E L+L   + LTSLP  I     
Sbjct: 78  -TSLPA-EIGQLTSLVKLDLTTWLEEPPSLLEELDSWE-LNLGNNR-LTSLPAEI----- 128

Query: 161 KRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
                     L +L ++   H + T         ELP+ I  L+++ EL + +  RL ++
Sbjct: 129 --------GQLTSLVELNLEHNKLT---------ELPAEIGQLASLVELNLGN-NRLTSL 170

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPS----------CNIDGTRSKEQPSSELKLKKCP 270
            + I +L  L  + ++   N    E+P+           N+   R    P+   +L    
Sbjct: 171 PAEIGQLTSL--VELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLK 228

Query: 271 RP-------ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           R         SLP+      SL  L +        +P E+G L +L RL +    +  LP
Sbjct: 229 RLFLHRNQLTSLPAEIGQLASLVELNL-HRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLP 287

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +GQL  L KL+L   ++L  + + I +L+S+  + +S                     
Sbjct: 288 AEIGQLTSLVKLDLT-TNKLTSLPAEIGQLESLRELRLSG-------------------- 326

Query: 384 ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                        ++L S+P+ +    SLT L++ +  +L  +P E+G L +L EL + G
Sbjct: 327 -------------NQLRSVPAEIGQLTSLTLLDLGN-NQLTSMPAEIGQLTSLVELNLGG 372

Query: 444 TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC--KNFMRLPDEI 500
             +  +P  + QLA L +L L + +   S+P+ +     LTSLE++       M +P E 
Sbjct: 373 NHLTSMPAEIGQLASLKRLFLHR-NQLTSMPAEI---GQLTSLEMLHLGGNQLMSVPAEA 428

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           G L  LK L +    +  VP  +GQL+SLE L L  N L  +P  + QL+SL +L L  N
Sbjct: 429 GQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGN 488

Query: 561 NLERIPERLDPLSS 574
            L  +P  +  L +
Sbjct: 489 QLTSLPAAIRDLGA 502


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 200/438 (45%), Gaps = 49/438 (11%)

Query: 46   LRYFEWHQFPLKTLNILHWE---NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
            L++ EW  F +   + + +     LV L M G    Q     +N  ++K +DL Y   L 
Sbjct: 590  LKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVDLSYCGTLK 649

Query: 103  KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLK 161
            + P+ S   NLE L L  C+SL   H S+  L+KL  LDL+ C +L   P+S +  K L+
Sbjct: 650  ETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLE 709

Query: 162  RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG-IEELPSSI-KCLSNIGELLIYSCKRLEN 219
             L L  C  ++ +P +++      L L     +  +  SI + L  +  L +  CK LE 
Sbjct: 710  VLNLSRCRKIEEIPDLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLER 769

Query: 220  ISSSIFKLQFLESIRIHRC------------PNLQFLEMPSCN----IDGTRSKEQPSSE 263
            + +S  K + L+ + +  C             NL+ L++ +C     I  +         
Sbjct: 770  LPTSHLKFKSLKVLNLRNCLNLEEIIDFSMASNLEILDLNTCFSLRIIHESIGSLDKLIT 829

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L+L  C   E LPS     KSL SL   +C   E+LP+   N+++L  + ++GTAIR LP
Sbjct: 830  LQLDLCHNLEKLPSS-LKLKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVLP 888

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP------------ 371
              +G L  L  L L +C+ L  + + I  LKS+E + +  CS L  FP            
Sbjct: 889  SSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFPPRSSLNFSQESS 948

Query: 372  -------EIPFCNIDGSG----IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
                   ++  CNI  S     +  + +S+ KLN      S   SL  FKSL  LE+ +C
Sbjct: 949  YFKLTVLDLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSCLPSLQNFKSLRFLELRNC 1008

Query: 421  KKLE---RLPDELGNLEA 435
            K L+   +LP  L  + A
Sbjct: 1009 KFLQNIIKLPHHLARVNA 1026



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 155/321 (48%), Gaps = 38/321 (11%)

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCS 341
           K++  +++  C   +  P+    L  L +L + G T+++ + E +  L+ L  L+L+ C 
Sbjct: 635 KTMKHVDLSYCGTLKETPNFSATLN-LEKLYLRGCTSLKVIHESVASLSKLVTLDLEGCD 693

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN----------------IDGSGIER 385
            LE   SS   LKS+E + +S C  ++  P++   +                 D  G   
Sbjct: 694 NLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNLKELYLRECDRLRIIHDSIGRSL 753

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALE-----E 438
               +L L  C  LE LP+S   FKSL  L + +C  LE + D     NLE L+      
Sbjct: 754 DKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRNCLNLEEIIDFSMASNLEILDLNTCFS 813

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           LR+    I E   SL +L    L+L  C + E LPS L + KSL SL   +C    +LP+
Sbjct: 814 LRI----IHESIGSLDKLI--TLQLDLCHNLEKLPSSLKL-KSLDSLSFTNCYKLEQLPE 866

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL 557
              N++ L+V+ + GTAIR +P S+G L  LE L L+D  NL  +P  ++ L SL  L L
Sbjct: 867 FDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHL 926

Query: 558 SN-NNLERIPERLDPLSSLKY 577
              + L+  P    P SSL +
Sbjct: 927 RGCSKLDMFP----PRSSLNF 943


>gi|13517466|gb|AAK28804.1|AF310959_1 resistance-like protein P1-B [Linum usitatissimum]
          Length = 1196

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 220/460 (47%), Gaps = 47/460 (10%)

Query: 3    KINSEIQINPYTFSK--MTELRLLKFCGSKNKCMVH----SLEGVPFTELRYFEWHQFPL 56
            K N+   +N  TF K  + E+ L ++     K  +H     L  +P   LR+ +W  +P 
Sbjct: 584  KANAFEGMNSLTFLKFELPEIELPRYRLKNVKTKIHLPYDGLNSLP-EGLRWLQWDGYPS 642

Query: 57   KTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
            K+L    + ++LV L + GS + + W+  D   LV+L  +DL+Y   L  +PD+S + NL
Sbjct: 643  KSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDLRYCANLIAIPDISSSLNL 702

Query: 114  EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            E L L  C SL E    +QYL KL  LD+  CK+L  LP  + SK LK + ++G   +  
Sbjct: 703  EELLLCLCVSLVEVPFHVQYLTKLVTLDISHCKNLKRLPPKLDSKLLKHVRMKGLG-ITR 761

Query: 174  LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY------------SCKRLENIS 221
             P++ S  L     L G  + ELPS+I  +   G L ++            + K    IS
Sbjct: 762  CPEIDSRELEE-FDLRGTSLGELPSAIYNIKQNGVLRLHGKNITKFPPITTTLKHFSLIS 820

Query: 222  SSIFKLQFLESIRIHRCPNLQFL-EMPSCNIDGTRSKE--------QPSSELKLKKCPRP 272
            +SI ++   +  + H+  +   L    +  + G R  E          S +L + + P  
Sbjct: 821  TSIREIDLADYHQQHQTSDGLLLPRFQNLFLAGNRQLEVLPNGIWNMISEDLLIGRSPLI 880

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
            ESLP       +LTSLE+  C +   +P  + NL++L  L +  T I+ LP  + +L  L
Sbjct: 881  ESLPEISEPMNTLTSLEVFYCRSLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELRQL 940

Query: 333  SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVL 391
              ++L+NC  LE I +SI  L S+ +  +S C  +   PE+P            P+   L
Sbjct: 941  YSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELP------------PNLKTL 988

Query: 392  KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
             ++ C  L++LPS+ C    L  +   +C ++++ +P E 
Sbjct: 989  NVSGCKSLQALPSNTCKLLYLNRIYFEECPQVDQTIPAEF 1028



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 49/352 (13%)

Query: 163 LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE-ELPSSIKCLSNIGELLIYSCKRLE--- 218
           L LR C+NL  +P ++S      L L       E+P  ++ L+ +  L I  CK L+   
Sbjct: 682 LDLRYCANLIAIPDISSSLNLEELLLCLCVSLVEVPFHVQYLTKLVTLDISHCKNLKRLP 741

Query: 219 -NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
             + S + K   ++ + I RCP +   E+   ++ GT   E PS+   +K+         
Sbjct: 742 PKLDSKLLKHVRMKGLGITRCPEIDSRELEEFDLRGTSLGELPSAIYNIKQ--------- 792

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
                     +  +   N  + P     L+  + +    T+IRE+             +L
Sbjct: 793 --------NGVLRLHGKNITKFPPITTTLKHFSLI---STSIREI-------------DL 828

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
            +  +    S  +  L   +++ ++    L+  P         +GI  + S  L + +  
Sbjct: 829 ADYHQQHQTSDGLL-LPRFQNLFLAGNRQLEVLP---------NGIWNMISEDLLIGRSP 878

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL- 456
            +ESLP       +LTSLE+  C+ L  +P  + NL +L  LR+  TGI+ +P S+ +L 
Sbjct: 879 LIESLPEISEPMNTLTSLEVFYCRSLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELR 938

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            L  + L+ C S ES+P+ ++   SL +  +  CK  + LP+   NL+ L V
Sbjct: 939 QLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLNV 990



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 193/454 (42%), Gaps = 71/454 (15%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q    +L  L++  C N   +PD   +L     L+    ++ E+P  +  L  L  L++ 
Sbjct: 673  QPQLVNLIVLDLRYCANLIAIPDISSSLNLEELLLCLCVSLVEVPFHVQYLTKLVTLDIS 732

Query: 339  NCSELEYI----SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
            +C  L+ +     S + K   ++ + I+ C  +    E+   ++ G+ +  +PS++  + 
Sbjct: 733  HCKNLKRLPPKLDSKLLKHVRMKGLGITRCPEIDS-RELEEFDLRGTSLGELPSAIYNIK 791

Query: 395  K----------CSKLESLPSSLCMFK----SLTSLEIIDCKKLERLPDELGNLEALEELR 440
            +           +K   + ++L  F     S+  +++ D  +  +  D L  L   + L 
Sbjct: 792  QNGVLRLHGKNITKFPPITTTLKHFSLISTSIREIDLADYHQQHQTSDGLL-LPRFQNLF 850

Query: 441  VEGTGIREV-PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
            + G    EV P  +  +    L + +    ESLP       +LTSLE+  C++   +P  
Sbjct: 851  LAGNRQLEVLPNGIWNMISEDLLIGRSPLIESLPEISEPMNTLTSLEVFYCRSLTSIPTS 910

Query: 500  IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
            I NL  L+ L +  T I+ +P S+ +L  L  + L +  +L+ IP S++ LSSLV+  +S
Sbjct: 911  ISNLRSLRSLRLSKTGIKSLPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMS 970

Query: 559  N----NNLERIPERLDPL--SSLKYLDLFENN------LDRIPEYLRSFPT---SIPSEF 603
                  +L  +P  L  L  S  K L    +N      L+RI  Y    P    +IP+EF
Sbjct: 971  GCKIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLLYLNRI--YFEECPQVDQTIPAEF 1028

Query: 604  TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG 663
             +                         ++  +    +Y  + +   G+E+PKWF ++S  
Sbjct: 1029 MA------------------------NFLVHASLSPSY-ERQVRCSGSELPKWFSYRSME 1063

Query: 664  ----STISLKTP---QPTGYNKLMGFAFCVVVAC 690
                ST+ ++ P       +  + G AF  V +C
Sbjct: 1064 DEDCSTVKVELPLANDSPDHPMIKGIAFGCVNSC 1097


>gi|296089464|emb|CBI39283.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 162/322 (50%), Gaps = 45/322 (13%)

Query: 283 KSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
           +SLTSL+I+   +C  FE+  +   N+  L  L +D + I+ELP  +G L  L  L L  
Sbjct: 35  RSLTSLKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYLESLKILNLSY 94

Query: 340 CSELEY-----------------------ISSSIFKLKSVESIEISNCSNLKGFPEI--- 373
           CS  E                        + ++I +L+++E +  S CSN + FPEI   
Sbjct: 95  CSNFEKFLEIQGSMKHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKN 154

Query: 374 --PFC--NIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
               C  ++D + I+ +P S+        L++  C  L  LP+++C  KSL  + +  C 
Sbjct: 155 MESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCS 214

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
           KLE   +   ++E LE L +  T I E+P S+  L  L  L+L  C    SLP  +    
Sbjct: 215 KLEAFLEIREDMEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVSLPDSIGNLT 274

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLE-YLKVLTIKGTAIR--EVPESLGQLSSLEWLVLSDN 537
            L SL + +C     LPD + +L+  L+VL + G  +   E+P  L  LSSLE+L +SDN
Sbjct: 275 CLRSLFVRNCSKLHNLPDNLRSLKCCLRVLDLGGCNLMEGEIPHDLWCLSSLEYLDISDN 334

Query: 538 NLQIIPESLNQLSSLVSLKLSN 559
            ++ IP  ++QLS L +L +++
Sbjct: 335 YIRCIPVGISQLSKLRTLLMNH 356



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 177/373 (47%), Gaps = 53/373 (14%)

Query: 160 LKRLVLRGCSNLKNLPKM-TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           LK L LR CS  +   +M T+  L + L L    I+ELPSSI  L ++  L +  C   E
Sbjct: 40  LKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYLESLKILNLSYCSNFE 99

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
                                  +FLE     I G+    +   EL LK+    E LP+ 
Sbjct: 100 -----------------------KFLE-----IQGSMKHLR---ELSLKETAIKE-LPNN 127

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
               ++L  L    C NFE+ P+   N++++  L +D TAI+ LP  +  L  L  LE++
Sbjct: 128 IGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEME 187

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK 398
           NC  L  + ++I  LKS+  I ++ CS L+ F EI     D   +ER+   +L+    + 
Sbjct: 188 NCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEI---REDMEQLERL--FLLE----TA 238

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL- 456
           +  LP S+   + L SLE+I+C+KL  LPD +GNL  L  L V   + +  +P +L  L 
Sbjct: 239 ITELPPSIEHLRGLKSLELINCEKLVSLPDSIGNLTCLRSLFVRNCSKLHNLPDNLRSLK 298

Query: 457 -ALSKLKLKKCSSFES-LPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEYLKVLTIKG 513
             L  L L  C+  E  +P  L+   SL  L+I D  N++R +P  I  L  L+ L +  
Sbjct: 299 CCLRVLDLGGCNLMEGEIPHDLWCLSSLEYLDISD--NYIRCIPVGISQLSKLRTLLMNH 356

Query: 514 TA----IREVPES 522
                 I E+P S
Sbjct: 357 CPMLEEITELPSS 369



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 161/328 (49%), Gaps = 29/328 (8%)

Query: 51  WHQFPLK-TLNILHWENLVSLKMPG----SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP 105
           W  F ++ T + ++  +L SLK+      SK  +  +   N+  L  + L  S++     
Sbjct: 20  WTTFIIQSTHHPIYIRSLTSLKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPS 79

Query: 106 DLSLAQNLEILDLGYCSSLT---ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLK 161
            +   ++L+IL+L YCS+     E   S+++L +L + +     ++  LP +I   + L+
Sbjct: 80  SIGYLESLKILNLSYCSNFEKFLEIQGSMKHLRELSLKE----TAIKELPNNIGRLEALE 135

Query: 162 RLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
            L   GCSN +  P++   ++ S  +L L    I+ LP SI  L+ +  L + +CK L  
Sbjct: 136 ILSFSGCSNFEKFPEIQK-NMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRC 194

Query: 220 ISSSIFKLQFLESIRIHRCPNLQ-FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
           + ++I  L+ L  I ++ C  L+ FLE+        R   +    L L +    E  PS 
Sbjct: 195 LPNNICGLKSLRGISLNGCSKLEAFLEI--------REDMEQLERLFLLETAITELPPSI 246

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEGLGQL-ALLSKLE 336
           +   + L SLE+I+C     LPD +GNL  L  L + + + +  LP+ L  L   L  L+
Sbjct: 247 E-HLRGLKSLELINCEKLVSLPDSIGNLTCLRSLFVRNCSKLHNLPDNLRSLKCCLRVLD 305

Query: 337 LKNCSELE-YISSSIFKLKSVESIEISN 363
           L  C+ +E  I   ++ L S+E ++IS+
Sbjct: 306 LGGCNLMEGEIPHDLWCLSSLEYLDISD 333



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 35/214 (16%)

Query: 410 KSLTSLEII---DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKC 466
           +SLTSL+I+   +C K E+  +   N+  L ELR++ + I+E+P S+  L          
Sbjct: 35  RSLTSLKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYL---------- 84

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
                        +SL  L +  C NF +  +  G++++L+ L++K TAI+E+P ++G+L
Sbjct: 85  -------------ESLKILNLSYCSNFEKFLEIQGSMKHLRELSLKETAIKELPNNIGRL 131

Query: 527 SSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
            +LE L  S  +N +  PE    + S+ SL L    ++ +P  +  L+ L +L++ EN  
Sbjct: 132 EALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEM-ENCK 190

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
           +     LR  P +I     SLR  + L  C KL+
Sbjct: 191 N-----LRCLPNNICG-LKSLR-GISLNGCSKLE 217



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 39/289 (13%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI---LDLGYC 121
           ++L  L +  + + +L +++  L +L+ +         K P++   +N+E    L L Y 
Sbjct: 109 KHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQ--KNMESICSLSLDY- 165

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT-S 179
           +++     SI +L +L+ L+++ CK+L  LP +I   K L+ + L GCS L+   ++   
Sbjct: 166 TAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEIRED 225

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                 L LL   I ELP SI+ L  +  L + +C++L ++  SI  L  L S+ +  C 
Sbjct: 226 MEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVSLPDSIGNLTCLRSLFVRNCS 285

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-R 298
            L  L                           P++L S +C    L  L++  C   E  
Sbjct: 286 KLHNL---------------------------PDNLRSLKC---CLRVLDLGGCNLMEGE 315

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           +P +L  L +L  L I    IR +P G+ QL+ L  L + +C  LE I+
Sbjct: 316 IPHDLWCLSSLEYLDISDNYIRCIPVGISQLSKLRTLLMNHCPMLEEIT 364


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 186/383 (48%), Gaps = 51/383 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N  TFSKM +L+LL          +H+L    G  F    LR+  W  +P K+L  
Sbjct: 551 EADWNLETFSKMCKLKLL---------YIHNLRLSVGPKFLPNALRFLSWSWYPSKSLPP 601

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+ ++ LV+LK IDL YS  L + PD +   NLE L L  
Sbjct: 602 CFQPDELTELSLVHSNIDHLWNGIKYLVNLKSIDLSYSINLRRTPDFTGIPNLEKLVLEG 661

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 662 CTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKKIPEFEGQ 721

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI                 E++S S+ +L  L  I I   P
Sbjct: 722 TNRLSNLSLGGTAVEKLPSSI-----------------EHLSESLVELD-LSGIVIREQP 763

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+         ++    S  L  +K P P   L +    F  L +L++ DC   E 
Sbjct: 764 YSLFLK---------QNLIVSSFGLFPRKSPHPLIPLLAPLKHFSCLRTLKLNDCNLCEG 814

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G+L +L RL + G     LP  +  L+ L+   + NC  L+ +     +L + +
Sbjct: 815 EIPNDIGSLSSLRRLELGGNNFVSLPASIYLLSKLTNFNVDNCKRLQQLP----ELSAKD 870

Query: 358 SIEIS-NCSNLKGFPEIP-FCNI 378
            +  S NC+ L+ FP+ P  C I
Sbjct: 871 VLPRSDNCTYLQLFPDPPDLCRI 893



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 224/505 (44%), Gaps = 72/505 (14%)

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK------GFPEIPFC 376
            P+ L +L+L+        S ++++ + I  L +++SI++S   NL+      G P +   
Sbjct: 605  PDELTELSLVH-------SNIDHLWNGIKYLVNLKSIDLSYSINLRRTPDFTGIPNLEKL 657

Query: 377  NIDG-SGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
             ++G + + +I  S+  L +        C  ++SLPS + M + L + ++  C KL+++P
Sbjct: 658  VLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNM-EFLETFDVSGCSKLKKIP 716

Query: 428  DELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS-SFESLPSRLYVSKSL--TS 484
            +  G    L  L + GT + ++P S+  L+ S ++L          P  L++ ++L  +S
Sbjct: 717  EFEGQTNRLSNLSLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSS 776

Query: 485  LEIIDCKNFMRLPDEIGNLEY---LKVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNL 539
              +   K+   L   +  L++   L+ L +    +   E+P  +G LSSL  L L  NN 
Sbjct: 777  FGLFPRKSPHPLIPLLAPLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLRRLELGGNNF 836

Query: 540  QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
              +P S+  LS L +  + N   L+++PE    LS+   L   +N       YL+ FP  
Sbjct: 837  VSLPASIYLLSKLTNFNVDNCKRLQQLPE----LSAKDVLPRSDNC-----TYLQLFPDP 887

Query: 599  IPSEFTSLRLSVDLRNCLKLDPNE-----LSEIIKDGWMK-----------QSVNGETYI 642
                  +    ++  NCL +  N+     L  ++K  W++           Q  +     
Sbjct: 888  PDLCRITTNFWLNCVNCLSMVGNQDASYFLYSVLKR-WIEVLSRCDMMVHMQETHRRPLK 946

Query: 643  TKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVE 702
            +  +  PG+EIP+WF +QS G  ++ K P     +K +GFA C ++    +     E   
Sbjct: 947  SLELVIPGSEIPEWFNNQSVGDRVTEKLPSDECNSKCIGFAVCALIVPPDNPSAVPEDPH 1006

Query: 703  -DDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGS--SIFAGENSCKRSDEF 759
             D   C ++   C  R   Y          +    SDH+ L    S F    +C   + F
Sbjct: 1007 IDPDTCRIW---C--RWNNYGIGLHGVGVSVKQFVSDHLCLLVLLSPFRKPENCLEVN-F 1060

Query: 760  FFHIDRS-----CCEVKKCGIHFVH 779
             F I R+     C +VKKCG+  ++
Sbjct: 1061 VFEITRAVGYNVCMKVKKCGVRALY 1085


>gi|357468503|ref|XP_003604536.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505591|gb|AES86733.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1088

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 134/248 (54%), Gaps = 14/248 (5%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNK----CMVHSLEGVPFTELRYFEWHQFPLKTL-NIL 62
           ++++P TFSKM  L+ L      ++     + H L  +P  ELRY  W  +PLK+L +  
Sbjct: 601 LKLSPSTFSKMRNLQFLYVPNVYDQDGFDLLPHGLHSMP-PELRYLCWMHYPLKSLPDEF 659

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             E LV L +  S+V +LW  VQNL++LK + L YS+ L +LPD S A NLE+LD+ +C 
Sbjct: 660 SAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKALNLEVLDIHFCG 719

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
            LT  H SI  L  LE LDL  C +LT L +  HS  L+ L L+ C N++     +   +
Sbjct: 720 QLTSVHPSIFSLENLEKLDLSHCTALTELTSDTHSSSLRYLSLKFCKNIRKFSVTSENMI 779

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSC--KRLENISSSIFKLQFLESIRIHRCPN 240
              L L    I  LP+S    + +  L + +C  +R  +   ++ +LQ+L+   I  C  
Sbjct: 780 E--LDLQYTQINALPASFGRQTKLEILHLGNCSIERFPSCFKNLIRLQYLD---IRYCLK 834

Query: 241 LQFL-EMP 247
           LQ L E+P
Sbjct: 835 LQTLPELP 842



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 167/388 (43%), Gaps = 64/388 (16%)

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK-LESLPSSL 406
           S+  K+++++ + + N  +  GF  +P       G+  +P  +  L      L+SLP   
Sbjct: 606 STFSKMRNLQFLYVPNVYDQDGFDLLP------HGLHSMPPELRYLCWMHYPLKSLPDEF 659

Query: 407 CMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRV-EGTGIREVPKSLAQLALSKLKL 463
               S   L I+D    ++E+L   + NL  L+E+++     ++++P     L L  L +
Sbjct: 660 ----SAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKALNLEVLDI 715

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI--GNLEYLKVLTIKGTAIREVPE 521
             C    S+   ++  ++L  L++  C     L  +    +L YL +   K   IR+   
Sbjct: 716 HFCGQLTSVHPSIFSLENLEKLDLSHCTALTELTSDTHSSSLRYLSLKFCKN--IRKFSV 773

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL- 580
           +   +  L+   L    +  +P S  + + L  L L N ++ER P     L  L+YLD+ 
Sbjct: 774 TSENMIELD---LQYTQINALPASFGRQTKLEILHLGNCSIERFPSCFKNLIRLQYLDIR 830

Query: 581 FENNLDRIPEYLRS----------------FPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
           +   L  +PE  +S                FP SIP +F   R  V   NCLKLD + L+
Sbjct: 831 YCLKLQTLPELPQSLEVLHARGCTSLESVLFP-SIPEQFKENRYRVVFANCLKLDEHSLA 889

Query: 625 EIIKDGWMK------QSVNG----------------ETYITKSMY-FPGNEIPKWFRHQS 661
            I  +  +       Q V+                 ++Y  +++Y +PGN +P+WF + +
Sbjct: 890 NIAFNAQINNMKFACQHVSALEHDFHNKFNDYKDHNDSY--QAIYVYPGNSVPEWFEYMT 947

Query: 662 TGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           T   + +     T  + L+GF FC V+ 
Sbjct: 948 TTDYVVIDLSSSTSSSPLLGFIFCFVLG 975


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 232/513 (45%), Gaps = 52/513 (10%)

Query: 8    IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWEN 66
            I ++P  F  M  LR+L   G+   C    ++ +P   L++ +WH+F   +L +    ++
Sbjct: 550  IDLDPEAFRSMKNLRILMVDGNVRFC--KKIKYLP-NGLKWIKWHRFAHPSLPSCFITKD 606

Query: 67   LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
            LV L +  S +T     +QN + LK +DL++S +L K+ + S A NLE L L  CS+L  
Sbjct: 607  LVGLDLQHSFITNFGKGLQNCMRLKLLDLRHSVILKKISESSAAPNLEELYLSNCSNLKT 666

Query: 127  THSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNLKNLPKMTSC-HLRS 184
               S   L KL  LDL  C +L  +P S I  + L+ L L  C  L+ +P ++S  +LRS
Sbjct: 667  IPKSFLSLRKLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKKLEKIPDISSASNLRS 726

Query: 185  TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC------ 238
                    +  +  SI  L+ +  L + +C  L+ +   I    FL+ + +  C      
Sbjct: 727  LSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRYI-SWNFLQDLNLSWCKKLEEI 785

Query: 239  ------PNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
                   NL+ L +  C     +  +         L L+KC   E LPS     KSL +L
Sbjct: 786  PDFSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPS-YLKLKSLQNL 844

Query: 289  EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
             +  C   E  P+   N+++L  L +D TAIRELP  +G L  L   +LK C+ L  +  
Sbjct: 845  TLSGCCKLETFPEIDENMKSLYILRLDSTAIRELPPSIGYLTHLYMFDLKGCTNLISLPC 904

Query: 349  SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
            +   LKS+  + +S  S  + F  I    I+                CS      SS  M
Sbjct: 905  TTHLLKSLGELHLSGSSRFEMFSYIWDPTINPV--------------CS------SSKIM 944

Query: 409  FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP--KSLAQLALSKLKLKKC 466
              SLTS E        R+P E    +    L +EG  I  V   + L  +A S   +   
Sbjct: 945  ETSLTS-EFFH----SRVPKESLCFKHFTLLDLEGCNISNVDFLEILCNVASSLSSILLS 999

Query: 467  -SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
             ++F SLPS L+   SL +LE+ +CK    +P+
Sbjct: 1000 ENNFSSLPSCLHKFMSLRNLELRNCKFLQEIPN 1032



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 134/272 (49%), Gaps = 22/272 (8%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC-N 377
           ++ +P+    L  L  L+L +C  L+ I  S    +++E +++S+C  L+  P+I    N
Sbjct: 664 LKTIPKSFLSLRKLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKKLEKIPDISSASN 723

Query: 378 IDGSGIERIPSSV--------------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           +     E+  + V              LKL  CS L+ LP  +  +  L  L +  CKKL
Sbjct: 724 LRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRYIS-WNFLQDLNLSWCKKL 782

Query: 424 ERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           E +PD   +   L+ L +E  T +R V  S+  L+ L  L L+KCS+ E LPS L + KS
Sbjct: 783 EEIPD-FSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYLKL-KS 840

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
           L +L +  C      P+   N++ L +L +  TAIRE+P S+G L+ L    L    NL 
Sbjct: 841 LQNLTLSGCCKLETFPEIDENMKSLYILRLDSTAIRELPPSIGYLTHLYMFDLKGCTNLI 900

Query: 541 IIPESLNQLSSLVSLKLSNNN-LERIPERLDP 571
            +P + + L SL  L LS ++  E      DP
Sbjct: 901 SLPCTTHLLKSLGELHLSGSSRFEMFSYIWDP 932



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 180/401 (44%), Gaps = 60/401 (14%)

Query: 205  NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL 264
            N+ EL + +C  L+ I  S   L+ L ++ +H C NL+  ++P   I       +   +L
Sbjct: 652  NLEELYLSNCSNLKTIPKSFLSLRKLVTLDLHHCVNLK--KIPRSYISW-----EALEDL 704

Query: 265  KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP 323
             L  C + E +P       +L SL    C N   + D +G+L  L  L +   + +++LP
Sbjct: 705  DLSHCKKLEKIPDISSA-SNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLP 763

Query: 324  EGLGQLALLSKLELKNCSELEYIS--SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
              +     L  L L  C +LE I   SS   LK    + +  C++L+   +         
Sbjct: 764  RYISW-NFLQDLNLSWCKKLEEIPDFSSTSNLKH---LSLEQCTSLRVVHD------SIG 813

Query: 382  GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
             + ++ S  L L KCS LE LPS L + KSL +L +  C KLE  P+   N+++L  LR+
Sbjct: 814  SLSKLVS--LNLEKCSNLEKLPSYLKL-KSLQNLTLSGCCKLETFPEIDENMKSLYILRL 870

Query: 442  EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF------- 493
            + T IRE+P S+  L  L    LK C++  SLP   ++ KSL  L +     F       
Sbjct: 871  DSTAIRELPPSIGYLTHLYMFDLKGCTNLISLPCTTHLLKSLGELHLSGSSRFEMFSYIW 930

Query: 494  ------------------------MRLPDEIGNLEYLKVLTIKGTAIREVP--ESLGQLS 527
                                     R+P E    ++  +L ++G  I  V   E L  ++
Sbjct: 931  DPTINPVCSSSKIMETSLTSEFFHSRVPKESLCFKHFTLLDLEGCNISNVDFLEILCNVA 990

Query: 528  SLEWLV-LSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            S    + LS+NN   +P  L++  SL +L+L N   L+ IP
Sbjct: 991  SSLSSILLSENNFSSLPSCLHKFMSLRNLELRNCKFLQEIP 1031



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 43/345 (12%)

Query: 90   LKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLT 149
            L+ ++L + K L ++PD S   NL+ L L  C+SL   H SI  L+KL  L+L++C +L 
Sbjct: 771  LQDLNLSWCKKLEEIPDFSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLE 830

Query: 150  SLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIG 207
             LP+ +  K L+ L L GC  L+  P++   +++S   L L    I ELP SI  L+++ 
Sbjct: 831  KLPSYLKLKSLQNLTLSGCCKLETFPEIDE-NMKSLYILRLDSTAIRELPPSIGYLTHLY 889

Query: 208  ELLIYSCKRLENISSSIFKLQFLESIRI---HRCPNLQFLEMPSCNIDGTRSK---EQPS 261
               +  C  L ++  +   L+ L  + +    R     ++  P+ N   + SK      +
Sbjct: 890  MFDLKGCTNLISLPCTTHLLKSLGELHLSGSSRFEMFSYIWDPTINPVCSSSKIMETSLT 949

Query: 262  SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
            SE    + P+ ESL      FK  T L++  C         + N+  L            
Sbjct: 950  SEFFHSRVPK-ESL-----CFKHFTLLDLEGC--------NISNVDFL------------ 983

Query: 322  LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC--NID 379
              E L  +A      L + +    + S + K  S+ ++E+ NC  L+  P +P C   +D
Sbjct: 984  --EILCNVASSLSSILLSENNFSSLPSCLHKFMSLRNLELRNCKFLQEIPNLPLCIQRVD 1041

Query: 380  GSG---IERIPSSVLKLNKCSKLESLPSSL-CMFKSLTSLEIIDC 420
             +G   + R P+++L +    ++  LP    C ++ L     I C
Sbjct: 1042 ATGCVSLSRSPNNILDIISSQQVHLLPIHFPCSYQILVIYTNIPC 1086



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 4/149 (2%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           ++++ +S A   L +L L  CS+ +++P      + L +L++  C N  ++P    + E 
Sbjct: 641 LKKISESSAAPNLEELYLSNCSNLKTIPKSFLSLRKLVTLDLHHCVNLKKIPRSYISWEA 700

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLE 563
           L+ L +      E    +   S+L  L      NL +I +S+  L+ LV+LKL N +NL+
Sbjct: 701 LEDLDLSHCKKLEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLK 760

Query: 564 RIPERLDPLSSLKYLDL-FENNLDRIPEY 591
           ++P R    + L+ L+L +   L+ IP++
Sbjct: 761 KLP-RYISWNFLQDLNLSWCKKLEEIPDF 788


>gi|255564976|ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537309|gb|EEF38940.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 944

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 153/295 (51%), Gaps = 26/295 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHS-------LEGVPFTELRYFEWHQ 53
           MSK + ++ ++P  F +M  LRLLKF  S +   ++S       LE +P  +L    W+ 
Sbjct: 535 MSK-SRKVYLSPKAFERMHNLRLLKFHHSFSPIAMYSKVYLPEGLESLP-DKLSCLHWNG 592

Query: 54  FPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           +PLK+L      E LV L MP S V  LW+  Q L  L  I+L  S+ L +LPD S A N
Sbjct: 593 YPLKSLPFNFCAEYLVELSMPHSHVKFLWEGDQCLKKLNSINLSDSQHLIRLPDFSEALN 652

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL- 171
           LE ++L  C SL +  SSI YL KL++L+L  CK L S+P+ I  + L++L L GCSNL 
Sbjct: 653 LEYINLEGCISLAQVPSSIGYLTKLDILNLKDCKELRSIPSLIDLQSLRKLNLSGCSNLN 712

Query: 172 --KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
             ++ P+         L L G  IEELP+SI+ LS +    + +CKRL+  S  +     
Sbjct: 713 HCQDFPRNI-----EELCLDGTAIEELPASIEDLSELTFWSMENCKRLDQNSCCLIAADA 767

Query: 230 LESIR-------IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
            ++I+       IH  P++ F   P   I      ++  S + +K  P     PS
Sbjct: 768 HKTIQRTATAAGIHSLPSVSF-GFPGTEIPDWLLYKETGSSITVKLHPNWHRNPS 821



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 165/405 (40%), Gaps = 88/405 (21%)

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSL 482
           LE LPD+L  L         G  ++ +P +     L +L +   S  + L       K L
Sbjct: 578 LESLPDKLSCLHW------NGYPLKSLPFNFCAEYLVELSMPH-SHVKFLWEGDQCLKKL 630

Query: 483 TSLEIIDCKNFMRLPD--EIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NN 538
            S+ + D ++ +RLPD  E  NLEY+    ++G  ++ +VP S+G L+ L+ L L D   
Sbjct: 631 NSINLSDSQHLIRLPDFSEALNLEYI---NLEGCISLAQVPSSIGYLTKLDILNLKDCKE 687

Query: 539 LQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
           L+ IP SL  L SL  L LS     N+ +  P  ++ L            LD     +  
Sbjct: 688 LRSIP-SLIDLQSLRKLNLSGCSNLNHCQDFPRNIEELC-----------LDGTA--IEE 733

Query: 595 FPTSIP--SEFTSLRLSVDLRNCLKLDPNELSEIIKDGW-----MKQSVNGETYITKSMY 647
            P SI   SE T       + NC +LD N    I  D          +    +  + S  
Sbjct: 734 LPASIEDLSELTFW----SMENCKRLDQNSCCLIAADAHKTIQRTATAAGIHSLPSVSFG 789

Query: 648 FPGNEIPKWFRHQSTGSTISLKTPQPTGY---NKLMGFAFCVVVACS----------VSE 694
           FPG EIP W  ++ TGS+I++K   P  +   ++ +GFA C VV  +          + E
Sbjct: 790 FPGTEIPDWLLYKETGSSITVKL-HPNWHRNPSRFLGFAVCCVVKFTHFIDINNIYVICE 848

Query: 695 CCRHESVEDDRKCNLF-----------DVVCDRRSE-GYD------SYTSSYLGKISHVE 736
           C    + +D    N F           D+V  +    GYD      +   +Y G++ H E
Sbjct: 849 CNFKTNHDDHHVVNCFLQGLNNGKDESDLVKSQHVYIGYDFGIYLRAVKGTYPGRLYHYE 908

Query: 737 SDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
                  +    G     R             +V KCG+H ++AQ
Sbjct: 909 EVTFKFYAKKMVGHTVAWR-------------KVDKCGVHLLYAQ 940



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 14/125 (11%)

Query: 279 QCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           QC+ K L S+ + D  +  RLPD  E  NL+ +N   ++G  ++ ++P  +G L  L  L
Sbjct: 625 QCL-KKLNSINLSDSQHLIRLPDFSEALNLEYIN---LEGCISLAQVPSSIGYLTKLDIL 680

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-----FCNIDGSGIERIPSSV 390
            LK+C EL  I S I  L+S+  + +S CSNL    + P      C +DG+ IE +P+S+
Sbjct: 681 NLKDCKELRSIPSLI-DLQSLRKLNLSGCSNLNHCQDFPRNIEELC-LDGTAIEELPASI 738

Query: 391 LKLNK 395
             L++
Sbjct: 739 EDLSE 743



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 15/156 (9%)

Query: 231 ESIRIHRCPNL-QFLEMPSCNIDGTRSKEQ-PSSE--------LKLKKCPRPESLPSGQC 280
           +S  + R P+  + L +   N++G  S  Q PSS         L LK C    S+PS   
Sbjct: 637 DSQHLIRLPDFSEALNLEYINLEGCISLAQVPSSIGYLTKLDILNLKDCKELRSIPS-LI 695

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             +SL  L +  C N     D   N++    L +DGTAI ELP  +  L+ L+   ++NC
Sbjct: 696 DLQSLRKLNLSGCSNLNHCQDFPRNIE---ELCLDGTAIEELPASIEDLSELTFWSMENC 752

Query: 341 SELEYISSSIFKLKSVESIE-ISNCSNLKGFPEIPF 375
             L+  S  +    + ++I+  +  + +   P + F
Sbjct: 753 KRLDQNSCCLIAADAHKTIQRTATAAGIHSLPSVSF 788


>gi|227438165|gb|ACP30572.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1184

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 225/503 (44%), Gaps = 76/503 (15%)

Query: 3    KINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN-I 61
            +I  EI I+   F  M+ L+ LK CG  +   +         +LR  EW  FP+  L   
Sbjct: 587  RIREEIDISEKAFEGMSNLQFLKVCGFTDALQITGGLNYLSHKLRLLEWRHFPMTCLPCT 646

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            ++ E LV L MP SK+ +LW+  + L  LK +DL YS  L +LPDLS A NLE L L  C
Sbjct: 647  VNLEFLVELVMPYSKLEKLWEGCKPLRCLKWMDLGYSVNLKELPDLSTATNLEKLYLYDC 706

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTS- 179
            SSL +  S     N LE L++  C SL   P+ I +   L+ L L    NL  LP     
Sbjct: 707  SSLVKLPSMSG--NSLEKLNIGGCSSLVEFPSFIGNAVNLQELDLSSFPNLLELPSYVGN 764

Query: 180  ------CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
                    LR+ L ++     ELP S++ L  +  L +  C +LE + ++I  L++L  +
Sbjct: 765  ATNLEYLDLRNCLNMV-----ELPLSLRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNEL 818

Query: 234  RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
             I  C +L   +  +                             G  +  +L  L I   
Sbjct: 819  DIAGCSSLDLGDFSTI----------------------------GNAV--NLRELNISSL 848

Query: 294  PNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            P    +P  +GN   L  L++   + + ELP  +G L  L  L L+ C  LE + ++I  
Sbjct: 849  PQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNI-N 907

Query: 353  LKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
            L+S+  + +S+CS LK FP+I       N+ G+ IE++P S+                  
Sbjct: 908  LESLLELNLSDCSMLKSFPQISTNLEKLNLRGTAIEQVPPSI------------------ 949

Query: 409  FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCS 467
             +S   L+ +     E L +    LE +  L +  T I+EVP  + Q++ L++  L  C 
Sbjct: 950  -RSWPHLKELHMSYFENLKEFPHALERITSLSLTDTEIQEVPPLVKQISRLNRFFLSGCR 1008

Query: 468  SFESLPSRLYVSKSLTSLEIIDC 490
                LP    +S+S  S+   DC
Sbjct: 1009 KLVRLPP---ISESTHSIYANDC 1028



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 161/632 (25%), Positives = 274/632 (43%), Gaps = 116/632 (18%)

Query: 112  NLEILDL-GYCSSLTETHSSIQYL-NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL---- 165
            NL+ L + G+  +L  T   + YL +KL +L+  R   +T LP +++ ++L  LV+    
Sbjct: 604  NLQFLKVCGFTDALQIT-GGLNYLSHKLRLLEW-RHFPMTCLPCTVNLEFLVELVMPYSK 661

Query: 166  -----RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
                  GC  L+ L  M   +         V ++ELP  +   +N+ +L +Y C      
Sbjct: 662  LEKLWEGCKPLRCLKWMDLGY--------SVNLKELPD-LSTATNLEKLYLYDC------ 706

Query: 221  SSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQC 280
             SS+ KL           P++    +   NI G               C      PS   
Sbjct: 707  -SSLVKL-----------PSMSGNSLEKLNIGG---------------CSSLVEFPSFIG 739

Query: 281  MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
               +L  L++   PN   LP  +GN   L  L +     + ELP  L  L  L +L LK 
Sbjct: 740  NAVNLQELDLSSFPNLLELPSYVGNATNLEYLDLRNCLNMVELPLSLRNLKKLKRLRLKG 799

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV----LKLNK 395
            CS+LE + ++I  L+ +  ++I+ CS+L           D      I ++V    L ++ 
Sbjct: 800  CSKLEVLPTNI-NLEYLNELDIAGCSSL-----------DLGDFSTIGNAVNLRELNISS 847

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV-PKSLA 454
              +L  +PS +    +L +L +  C KL  LP  +GNL+ L  LR+EG    EV P ++ 
Sbjct: 848  LPQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNIN 907

Query: 455  QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG- 513
              +L +L L  CS  +S P    +S +L  L +       ++P  I +  +LK L +   
Sbjct: 908  LESLLELNLSDCSMLKSFPQ---ISTNLEKLNLRGTA-IEQVPPSIRSWPHLKELHMSYF 963

Query: 514  TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPL 572
              ++E P +L +++SL    L+D  +Q +P  + Q+S L    LS    L R+P    P+
Sbjct: 964  ENLKEFPHALERITSLS---LTDTEIQEVPPLVKQISRLNRFFLSGCRKLVRLP----PI 1016

Query: 573  SSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWM 632
            S   +  ++ N+ D +     SF   I       RL+    NC KL+      II+    
Sbjct: 1017 SESTH-SIYANDCDSLEILECSFSDQIR------RLT--FANCFKLNQEARDLIIQAS-- 1065

Query: 633  KQSVNGETYITKSMYFPGNEIPKWFRHQSTGST-ISLKTPQPTGYNKLMGFAFCVVV--- 688
                      ++    PG ++P +F H++TG   +++K  Q     + M F  C+++   
Sbjct: 1066 ----------SEHAVLPGGQVPPYFTHRATGGGPLTIKXXQXX-LPESMTFKACILLLNK 1114

Query: 689  ----ACSVSECCRHESVEDDRKCNLFDVVCDR 716
                ACS  +  R + V ++    L+  + + 
Sbjct: 1115 GDXEACSKEKSRRVDVVNNNIIFGLYPALAEH 1146


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 47/377 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
           E   N   FSKM  L+LL          +H+L    G  +    LR  +W  +P K+L  
Sbjct: 519 EADWNLEAFSKMCNLKLL---------YIHNLRLSLGPKYLPDALRILKWSWYPSKSLPP 569

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L    S +  LW+ ++ L  LK IDL YS  LT+ PD +   NLE L L  
Sbjct: 570 GFQPDELTELSFVHSNIDHLWNGIKYLDKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEG 629

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 630 CTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQ 689

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI                 E++S S+ +L  L  I I   P
Sbjct: 690 TKRLSKLYLGGTAVEKLPSSI-----------------EHLSKSLVELD-LSGIVIREQP 731

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+         ++    S  L  +K P P   L +    F SLTSL++ DC   E 
Sbjct: 732 YSLFLK---------QNLIVSSFGLLPRKSPHPLIPLLASLKQFSSLTSLKLNDCNLCEG 782

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G+L +LN L + G     LP  +  L+ LS ++L+NC  L+ +           
Sbjct: 783 EIPNDIGSLPSLNWLELRGNNFVSLPASIHLLSKLSYIDLENCKRLQQLPE--LPASDYL 840

Query: 358 SIEISNCSNLKGFPEIP 374
           ++   +C++L  FP+ P
Sbjct: 841 NVATDDCTSLLVFPDPP 857



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 170/375 (45%), Gaps = 80/375 (21%)

Query: 352 KLKSVE---SIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSVLKLNK--------CSKL 399
           KLKS++   SI ++   +  G P +    ++G + + +I  S+  L +        C  +
Sbjct: 598 KLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 657

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP-------KS 452
           +SLPS + M + L + ++  C KL+ +P+ +G  + L +L + GT + ++P       KS
Sbjct: 658 KSLPSEVNM-EFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGGTAVEKLPSSIEHLSKS 716

Query: 453 LAQLALSKLKLKK------------CSSFESLPSR-----------LYVSKSLTSLEIID 489
           L +L LS + +++             SSF  LP +           L    SLTSL++ D
Sbjct: 717 LVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKSPHPLIPLLASLKQFSSLTSLKLND 776

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
           C           NL        +G    E+P  +G L SL WL L  NN   +P S++ L
Sbjct: 777 C-----------NL-------CEG----EIPNDIGSLPSLNWLELRGNNFVSLPASIHLL 814

Query: 550 SSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL 608
           S L  + L N   L+++PE    L +  YL++  ++       L  FP   P + +  R 
Sbjct: 815 SKLSYIDLENCKRLQQLPE----LPASDYLNVATDDCTS----LLVFPD--PPDLS--RF 862

Query: 609 SVDLRNCLKLDPNELSEIIKDGWMKQSV--NGETYITKSMYFPGNEIPKWFRHQSTGSTI 666
           S+   NCL    N+ +       +K+ +     ++       PG+EIP+WF +QS G  +
Sbjct: 863 SLTAVNCLSTVGNQDASYYLYSVIKRLLEETPSSFHFHKFVIPGSEIPEWFNNQSVGDRV 922

Query: 667 SLKTPQPTGYNKLMG 681
           + K P     +K +G
Sbjct: 923 TEKLPSDACNSKWIG 937


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 203/478 (42%), Gaps = 57/478 (11%)

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS------ 388
            L++K C      S  + +      I I       G P    C   GS +  +P       
Sbjct: 1047 LKVKECGVRLIYSQDLQQSHEDADIRICRACQRDGTPRRKCC-FKGSDMNEVPIIENPLE 1105

Query: 389  -SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
               L L  C  L SLPSS+  FKSL +L    C +LE  P+ L ++E+L +L + GT I+
Sbjct: 1106 LDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIK 1165

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            E+P S+ +L  L  L L+ C +  +LP  +    S  +L +  C NF +LPD +G L+ L
Sbjct: 1166 EIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSL 1225

Query: 507  KVLTIK--GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            + L +    +   ++P SL  L SL  L L   NL+  P  +  LSSLV+L L  N+  R
Sbjct: 1226 EYLFVGHLDSMNFQLP-SLSGLCSLRTLKLQGCNLREFPSEIYYLSSLVTLSLGGNHFSR 1284

Query: 565  IPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNEL 623
            IP+ +  L +L+ L L     L  IPE        +PS    L    D  +C  L+   L
Sbjct: 1285 IPDGISQLYNLENLYLGHCKMLQHIPE--------LPSGLFCL----DAHHCTSLE--NL 1330

Query: 624  SEIIKDGW------MKQSVNGETYITKSMYF--PGNEIPKWFRHQSTGSTISLKTPQPTG 675
            S      W       K  + G  +    + F    N IP+W  HQ +G  I++K P    
Sbjct: 1331 SSRSNLLWSSLFKCFKSQIQGREFRKTLITFIAESNGIPEWISHQKSGFKITMKLPWSWY 1390

Query: 676  YN-KLMGFAFCVVVACSVSECCRHESVEDDRKCNL-FDVVCDRRSEGYDSYTSSYLGKIS 733
             N   +GF  C +      E  +H        C L FD         Y SY S    +  
Sbjct: 1391 ENDDFLGFVLCSLCVPLEIETKKHRCF----NCKLNFD-----DDSAYFSYQSFQFCEFC 1441

Query: 734  HVESDHVFLGSSIFAGE---------NSCKRSDEFF-FHIDRSCCEVKKCGIHFVHAQ 781
            + E D    G  I+  +         N  +  + FF  +      +V +CG HF++A 
Sbjct: 1442 YDE-DASSQGCLIYYPKSRIPKRYHSNEWRTLNAFFNVYFGVKPVKVARCGFHFLYAH 1498



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 145/319 (45%), Gaps = 44/319 (13%)

Query: 14  TFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LHWENLV 68
           +F +M  LRLLK    + K  +  H      F   EL Y  W  +PL++L +  H +NLV
Sbjct: 546 SFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLV 605

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            L +  S + Q+W   +    L+ IDL +S  L ++PD S   NLEIL L          
Sbjct: 606 ELSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTL---------- 655

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS--T 185
                         + C +L  LP  I+  K+L+ L   GCS L+  P++    +R    
Sbjct: 656 --------------EGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKG-DMRELRV 700

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
           L L G  I +LPSSI  L+ +  LL+  C +L  I + I  L  L+ + +  C N+    
Sbjct: 701 LDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHC-NIMEGG 759

Query: 246 MPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           +PS  C++   +       +L L++     S+P+       L  L +  C N E++P+  
Sbjct: 760 IPSDICHLSSLQ-------KLNLEQ-GHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELP 811

Query: 304 GNLQALNRLIIDGTAIREL 322
             L+ L+    + T+ R L
Sbjct: 812 SRLRLLDAHGSNRTSSRAL 830



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 130/305 (42%), Gaps = 56/305 (18%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +L L  C  LE LP  +  +K L +L    C KLER P+  G++  L  L + GT I ++
Sbjct: 652 ILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDL 711

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S+  L                         L +L + +C    ++P+ I +L  LK L
Sbjct: 712 PSSITHL-----------------------NGLQTLLLQECLKLHQIPNHICHLSSLKEL 748

Query: 510 TIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            +    I E  +P  +  LSSL+ L L   +   IP ++NQLS L  L LS+ NNLE+IP
Sbjct: 749 DLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 808

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           E   P S L+ LD   +N            TS  + F  L     L NC           
Sbjct: 809 EL--P-SRLRLLDAHGSN-----------RTSSRALFLPLH---SLVNCFSW-------- 843

Query: 627 IKDGWMKQSVNGETYITKS--MYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGF 682
              G  + S +  +Y  K   +  P  + IP+W   ++       + PQ     N+ +GF
Sbjct: 844 -AQGLKRTSFSDSSYRGKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGF 902

Query: 683 AFCVV 687
           A C V
Sbjct: 903 ALCCV 907



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 132/317 (41%), Gaps = 31/317 (9%)

Query: 233  IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE-------LKLKKCPRPESLPSGQCMFKSL 285
            IRI R           C   G+   E P  E       L L+ C    SLPS    FKSL
Sbjct: 1071 IRICRACQRDGTPRRKCCFKGSDMNEVPIIENPLELDSLCLRDCRNLTSLPSSIFGFKSL 1130

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             +L    C   E  P+ L ++++L +L ++GTAI+E+P  + +L  L  L L+NC  L  
Sbjct: 1131 ATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVN 1190

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPS 404
            +  SI  L S +++ +S C N    P+          + R+ S   L +     +     
Sbjct: 1191 LPESICNLTSFKTLVVSRCPNFNKLPD---------NLGRLQSLEYLFVGHLDSMNFQLP 1241

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            SL    SL +L++  C  L   P E+  L +L  L + G     +P  ++QL  L  L L
Sbjct: 1242 SLSGLCSLRTLKLQGC-NLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYL 1300

Query: 464  KKCSSFE---SLPSRLYV--SKSLTSLEIIDCKN-------FMRLPDEIGNLEYLKVLTI 511
              C   +    LPS L+   +   TSLE +  ++       F     +I   E+ K L  
Sbjct: 1301 GHCKMLQHIPELPSGLFCLDAHHCTSLENLSSRSNLLWSSLFKCFKSQIQGREFRKTLIT 1360

Query: 512  KGTAIREVPESLGQLSS 528
                   +PE +    S
Sbjct: 1361 FIAESNGIPEWISHQKS 1377



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 15/236 (6%)

Query: 136  KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  C++LTSLP+SI   K L  L   GCS L++ P+ +        L L G  I
Sbjct: 1105 ELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAI 1164

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI+ L  +  LL+ +CK L N+  SI  L   +++ + RCPN  F ++P  N+  
Sbjct: 1165 KEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPN--FNKLPD-NLGR 1221

Query: 254  TRSKEQP-SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             +S E      L       P    SG C   SL +L++  C N    P E+  L +L  L
Sbjct: 1222 LQSLEYLFVGHLDSMNFQLPS--LSGLC---SLRTLKLQGC-NLREFPSEIYYLSSLVTL 1275

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI---SSSIFKLKSVESIEISNCS 365
             + G     +P+G+ QL  L  L L +C  L++I    S +F L +     + N S
Sbjct: 1276 SLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLENLS 1331



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 41/308 (13%)

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK-------NLPK---MTSCHLRSTL 186
           +E L LDRCK   S  T+   K + RL L    N +       +LP+     S  L + L
Sbjct: 527 IEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYEL-AYL 585

Query: 187 PLLGVGIEELPSSIKCLSNIGELL-----IYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
              G  +E LP +     N+ EL      I    R   +   +  +    S+ + R P+ 
Sbjct: 586 HWDGYPLESLPMNFHA-KNLVELSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPD- 643

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
            F  +P+  I            L L+ C   E LP G   +K L +L    C   ER P+
Sbjct: 644 -FSSVPNLEI------------LTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPE 690

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
             G+++ L  L + GTAI +LP  +  L  L  L L+ C +L  I + I  L S++ +++
Sbjct: 691 IKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDL 750

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDC 420
            +C+ ++G      C++         SS+ KLN +     S+P+++     L  L +  C
Sbjct: 751 GHCNIMEGGIPSDICHL---------SSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHC 801

Query: 421 KKLERLPD 428
             LE++P+
Sbjct: 802 NNLEQIPE 809



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 30/155 (19%)

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP----K 176
            +++ E  SSIQ L  L+ L L  CK+L +LP SI +    K LV+  C N   LP    +
Sbjct: 1162 TAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGR 1221

Query: 177  MTS----------------------CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC 214
            + S                      C LR TL L G  + E PS I  LS++  L +   
Sbjct: 1222 LQSLEYLFVGHLDSMNFQLPSLSGLCSLR-TLKLQGCNLREFPSEIYYLSSLVTLSL-GG 1279

Query: 215  KRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
                 I   I +L  LE++ +  C  LQ + E+PS
Sbjct: 1280 NHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPS 1314


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 227/506 (44%), Gaps = 74/506 (14%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
           +++ ++   F KM  LRLL     +N      +E +P   L++ +WH FP  TL +    
Sbjct: 500 TKLDVDLQAFRKMKNLRLLIV---QNARFCTKIEYLP-DSLKWIKWHGFPQSTLPSCFIT 555

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NLV L +  S +      +++   LK +DL YS LL ++PD S A NL  L L  C++L
Sbjct: 556 KNLVGLDLQHSFIKTFEKRLKDCERLKHVDLSYSTLLEQIPDFSAASNLGELYLINCTNL 615

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                S+  LN L VL+LD                       GCSNLK  P+        
Sbjct: 616 GMIDKSLFSLNNLIVLNLD-----------------------GCSNLKKFPR-------- 644

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                             LS++ EL +  CK+LE I   +     LE + +  C NL+ +
Sbjct: 645 --------------GYFMLSSLKELRLSYCKKLEKI-PDLSAASNLERLYLQECTNLRLI 689

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                ++D           L L++C     LPS     KSL +LE+  C   E  P    
Sbjct: 690 HESVGSLDKL-------DHLDLRQCTNLSKLPS-HLRLKSLQNLELSRCCKLESFPTIDE 741

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           N+++L  L +D TAI+ELP  +G L  L  L L +C+ L  + ++I+ L++++ + +S C
Sbjct: 742 NMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDELLLSGC 801

Query: 365 SNLKGFPE------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           S  + FP        P C+     IE    S+   +     ESL S   +   L S  I 
Sbjct: 802 SRFRIFPHKWDRSIQPVCS-PTKMIETTSWSLEFPHLLVPNESLFSHFTLL-DLKSCNIS 859

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLY 477
           + K LE L D       L +LR+       +P  L + ++L  L+LK C   + +P+   
Sbjct: 860 NAKFLEILCDV---APFLSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPN--- 913

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNL 503
           + K++  ++   C++ +R P+ I ++
Sbjct: 914 LPKNIQKMDASGCESLVRSPNNIVDI 939



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 33/281 (11%)

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           KL+  N ++L+    +  K+K++  + + N           FC    + IE +P S+   
Sbjct: 493 KLDFPNPTKLDVDLQAFRKMKNLRLLIVQNAR---------FC----TKIEYLPDSL--- 536

Query: 394 NKCSKLESLPSSL---CMF-KSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIRE 448
            K  K    P S    C   K+L  L++     ++     L + E L+ + +   T + +
Sbjct: 537 -KWIKWHGFPQSTLPSCFITKNLVGLDL-QHSFIKTFEKRLKDCERLKHVDLSYSTLLEQ 594

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +P   A   L +L L  C++   +   L+   +L  L +  C N  + P     L  LK 
Sbjct: 595 IPDFSAASNLGELYLINCTNLGMIDKSLFSLNNLIVLNLDGCSNLKKFPRGYFMLSSLKE 654

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
           L +      E    L   S+LE L L +  NL++I ES+  L  L  L L    NL ++P
Sbjct: 655 LRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKLP 714

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
             L  L SL+ L+     L R  + L SFPT I     SLR
Sbjct: 715 SHL-RLKSLQNLE-----LSRCCK-LESFPT-IDENMKSLR 747


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 151/321 (47%), Gaps = 31/321 (9%)

Query: 7   EIQINPYTFSKMTELRLLKF-------------CGSKNKCMVHSLEGVPF--TELRYFEW 51
           EI      F++M  LRLL+                 K KC V   +   F   ELRY  W
Sbjct: 530 EIHFTTEAFARMNRLRLLEVYESNLSDDSDSESTSRKRKCKVRFSDDFKFHSDELRYLYW 589

Query: 52  HQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
           H++PL+TL +    +NLV L MP S++T+ W   Q   +LK +DL  SK L + PD S  
Sbjct: 590 HEYPLQTLPSHFKPKNLVCLCMPYSQITEPWKGSQVCENLKFLDLSNSKFLMETPDFSRI 649

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            NLE L L  C++L   HSS+  L KL  L +  C  L   P       L+ L L GCSN
Sbjct: 650 TNLEELVLDGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFPAIYKLVSLQTLDLSGCSN 709

Query: 171 LKNLPKMTSCHLR--STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           L+  P + S H+   S L L G  I E+P+SI   S +  L + +CK L+ + SSI KL 
Sbjct: 710 LQKFPDI-SQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLT 768

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKE------QPSSELKLKKCPRPESLPSGQCMF 282
            L  + +  C  L   +  S N+D    K         S +       R   LP   C+F
Sbjct: 769 LLRILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLKSLNLSGNRFIHLP---CIF 825

Query: 283 KSLTS---LEIIDCPNFERLP 300
           K L++   L++ DC   + LP
Sbjct: 826 KGLSNLSRLDLHDCRRLQTLP 846



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 33/224 (14%)

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +++ P+F R+ +       L  L++DG T +  L   LG+L  L+ L + NC +L    +
Sbjct: 640 LMETPDFSRITN-------LEELVLDGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFPA 692

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV--------LKL 393
            I+KL S++++++S CSNL+ FP+I           +DG+ I  IP+S+        L L
Sbjct: 693 -IYKLVSLQTLDLSGCSNLQKFPDISQHMPCLSKLYLDGTAITEIPASIAYASELVLLDL 751

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
             C +L+ LPSS+     L  L +  C KL +     GNL+ L   R+   GI    KSL
Sbjct: 752 TNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLKSL 811

Query: 454 AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
                        + F  LP       +L+ L++ DC+    LP
Sbjct: 812 NLSG---------NRFIHLPCIFKGLSNLSRLDLHDCRRLQTLP 846



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 188/452 (41%), Gaps = 92/452 (20%)

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKL 461
            S +C  ++L  L++ + K L   PD    +  LEEL ++G T +  +  SL +L  L+ L
Sbjct: 623  SQVC--ENLKFLDLSNSKFLMETPD-FSRITNLEELVLDGCTNLCHLHSSLGRLRKLAFL 679

Query: 462  KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
             +  C      P+ +Y   SL +L++  C N  + PD   ++  L  L + GTAI E+P 
Sbjct: 680  SVSNCIKLRDFPA-IYKLVSLQTLDLSGCSNLQKFPDISQHMPCLSKLYLDGTAITEIPA 738

Query: 522  SLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS-----------NNNLER----- 564
            S+   S L  L L++   L+ +P S+ +L+ L  L LS           + NL+R     
Sbjct: 739  SIAYASELVLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNSGNLDRLSGKR 798

Query: 565  ----------------------IPERLDPLSSLKYLDLFE----NNLDRIPEYLR----- 593
                                  +P     LS+L  LDL +      L  +P  +R     
Sbjct: 799  LSHLGILSSLKSLNLSGNRFIHLPCIFKGLSNLSRLDLHDCRRLQTLPLLPPSVRILNAS 858

Query: 594  ---SFPTSIP-SEFTSLRLSVDLRNCLKL-------DPN---ELSEIIKDGWMKQSVNGE 639
               S  + +P S F S R  +   NCL+L       +P+     + + ++ W  +S   E
Sbjct: 859  NCTSLESILPESVFMSFRGCL-FGNCLRLMKYPSTMEPHIRSMATHVDQERW--RSTYDE 915

Query: 640  TY-----ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ------PTGYNKLMGFAFCVVV 688
             Y     I  S   PG+ IP WFR +  G  I+++  Q      P   N  +G A   VV
Sbjct: 916  EYPSFAGIPFSNVVPGSGIPDWFRDRREGHDINIEVHQNWYSSTPGSNNNFLGLALSAVV 975

Query: 689  ACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD--SYTSSYLGKISH--VESDHVFLGS 744
            A       R         C+L+    D +SE     S+T     ++ H  +ESDH++L  
Sbjct: 976  APQDGFLGRGWYP----YCDLY-TQNDPKSESSHICSFTDGRTYQLEHTPIESDHLWLAY 1030

Query: 745  SIFAGENSCKRSDEFFFHIDRSC-CEVKKCGI 775
                   SC++     F    S  C VK CG+
Sbjct: 1031 VPSFFSFSCEKWSCIKFSFGTSGECVVKSCGV 1062



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 45/234 (19%)

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
           ++N+ EL++  C  L ++ SS+ +L+            L FL + +C             
Sbjct: 649 ITNLEELVLDGCTNLCHLHSSLGRLR-----------KLAFLSVSNC------------- 684

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
            +KL+  P    L S       L +L++  C N ++ PD   ++  L++L +DGTAI E+
Sbjct: 685 -IKLRDFPAIYKLVS-------LQTLDLSGCSNLQKFPDISQHMPCLSKLYLDGTAITEI 736

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +   + L  L+L NC EL+++ SSI KL  +  + +S CS L  F +    N+D   
Sbjct: 737 PASIAYASELVLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNS-GNLDRLS 795

Query: 383 IERIP------SSVLKLNKCSKLESLPSSLCMFKSLTS---LEIIDCKKLERLP 427
            +R+       S        ++   LP   C+FK L++   L++ DC++L+ LP
Sbjct: 796 GKRLSHLGILSSLKSLNLSGNRFIHLP---CIFKGLSNLSRLDLHDCRRLQTLP 846



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 62/319 (19%)

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESL 472
            +LE++      +  DE G  E +E + +  TG++E+  + A  A ++KL++         
Sbjct: 1773 ALEVLGSSFCNKSKDEWGT-EDIEVIVLNLTGLKEIRFTTAAFAKMTKLRM--------- 1822

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
               L +    ++ ++  C    + P    ++  L+ L + GTAI E+P S+   + L  L
Sbjct: 1823 ---LIIISECSANQMQCCSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLL 1879

Query: 533  VLSD-NNLQIIPESLNQLS-----------SLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
             L +   L  +P S+++L+            L   ++++ NL+ +P+ LD L SL+ L+L
Sbjct: 1880 DLKNCRKLLSLPSSISKLTLLETLSLSGCLDLGKCQVNSGNLDALPQTLDRLCSLRRLEL 1939

Query: 581  FENNLDRIPEYLRSFPTSI----------------PSEFTSLRLSVDLRNCLKLD--PNE 622
               N   +P  L + P+S+                 S F     S+   NC KL   P+ 
Sbjct: 1940 --QNCSGLPS-LPALPSSVELINASNCKSLEDISPQSVFLCFGGSI-FGNCFKLSKYPST 1995

Query: 623  LSEIIKDGWMKQSVNGETYITK------------SMYFPGNEIPKWFRHQSTGSTISLKT 670
            +   ++   M    N E + +             S  FPG+ IP WF+H+S G  I++K 
Sbjct: 1996 MERDLQR--MAAHANQERWWSTFEQQNPNVQVPFSTVFPGSRIPDWFKHRSQGHEINIKV 2053

Query: 671  PQPTGYNKLMGFAFCVVVA 689
                  +  +GFA   V+A
Sbjct: 2054 SPNWYTSNFLGFALSAVIA 2072



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 105/235 (44%), Gaps = 44/235 (18%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
           NS+  +    FS++T L  L   G  N C +HS  G               L+ L  L  
Sbjct: 636 NSKFLMETPDFSRITNLEELVLDGCTNLCHLHSSLG--------------RLRKLAFLSV 681

Query: 65  ENLVSLK-MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC-- 121
            N + L+  P          +  LVSL+ +DL     L K PD+S  Q++  L   Y   
Sbjct: 682 SNCIKLRDFPA---------IYKLVSLQTLDLSGCSNLQKFPDIS--QHMPCLSKLYLDG 730

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR-LVLRGCSNL-------KN 173
           +++TE  +SI Y ++L +LDL  CK L  LP+SI    L R L L GCS L        N
Sbjct: 731 TAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNSGN 790

Query: 174 LPKMTSCHL--------RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
           L +++   L          +L L G     LP   K LSN+  L ++ C+RL+ +
Sbjct: 791 LDRLSGKRLSHLGILSSLKSLNLSGNRFIHLPCIFKGLSNLSRLDLHDCRRLQTL 845



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 17/142 (11%)

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C   E+ P    ++  L RL +DGTAI ELP  +     L  L+LKNC +L  + SSI K
Sbjct: 1837 CSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISK 1896

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPS 404
            L  +E++ +S C +L        C ++   ++ +P ++        L+L  CS L SLP+
Sbjct: 1897 LTLLETLSLSGCLDLGK------CQVNSGNLDALPQTLDRLCSLRRLELQNCSGLPSLPA 1950

Query: 405  SLCMFKSLTSLEIIDCKKLERL 426
               +  S+  +   +CK LE +
Sbjct: 1951 ---LPSSVELINASNCKSLEDI 1969



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 50/229 (21%)

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            +LE++      +  DE G  + +  ++++ T ++E+       A ++KL +         
Sbjct: 1773 ALEVLGSSFCNKSKDEWGT-EDIEVIVLNLTGLKEIRFTTAAFAKMTKLRM--------- 1822

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGIERIPSSV-------- 390
               +  +    + ++  CS L+  P I          C +DG+ I  +PSS+        
Sbjct: 1823 ---LIIISECSANQMQCCSKLEKSPVISQHMPCLRRLC-LDGTAITELPSSIAYATQLVL 1878

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C KL SLPSS+     L +L +  C  L +     GNL+AL             P
Sbjct: 1879 LDLKNCRKLLSLPSSISKLTLLETLSLSGCLDLGKCQVNSGNLDAL-------------P 1925

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            ++L +L +L +L+L+ CS   SLP+        +S+E+I+  N   L D
Sbjct: 1926 QTLDRLCSLRRLELQNCSGLPSLPAL------PSSVELINASNCKSLED 1968


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 195/383 (50%), Gaps = 32/383 (8%)

Query: 18  MTELRLLKFCGS-KNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGS 75
           M  LR+L   G   +     S+E +P + LR+F    +P ++L +    + LV L++  S
Sbjct: 551 MKRLRILHIKGYLSSTSHDGSIEYLP-SNLRWFVLDDYPWESLPSTFDLKMLVHLELSRS 609

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLN 135
            +  LW + ++L SL+RIDL  S+ L + PD +   NLE L++ YC +L E H S++  +
Sbjct: 610 SLHYLWTETKHLPSLRRIDLSSSRRLRRTPDFTGMPNLEYLNMLYCRNLEEVHHSLRCCS 669

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS----TLPLLGV 191
           KL  L+L+ CKSL   P  ++ + L+ L L  CS+L+  P++   H R      + + G 
Sbjct: 670 KLIRLNLNNCKSLKRFPC-VNVESLEYLSLEYCSSLEKFPEI---HGRMKPEIQIHMQGS 725

Query: 192 GIEELPSSI-KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           GI ELPSSI +  ++I +L +   ++L  + SSI +L+ L S+ +  C  L+ L     +
Sbjct: 726 GIRELPSSITQYQTHITKLDLRGMEKLVALPSSICRLKSLVSLSVSGCFKLESLPEEVGD 785

Query: 251 IDG--------TRSKEQPSSELKLKKCPRPE----------SLPSGQCMFKSLTSLEIID 292
           ++         T     PSS ++L K    +           LP     F+SL +L + +
Sbjct: 786 LENLEELDASCTLISRPPSSIIRLSKLKIFDFGSSKDRVHFELPPVVEGFRSLETLSLRN 845

Query: 293 CPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C   +  LP+++G+L +L +L + G     LP  + QL  L  LEL+NC  L  +     
Sbjct: 846 CNLIDGGLPEDMGSLSSLKKLYLSGNNFEHLPRSIAQLGALRILELRNCKRLTQLPEFTG 905

Query: 352 KLKSVESIEISNCSNLKGFPEIP 374
            L ++E +++  CS L+     P
Sbjct: 906 ML-NLEYLDLEGCSYLEEVHHFP 927



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 40/366 (10%)

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L   ++D      LP     L +L  LEL   S L Y+ +    L S+  I++S+   L+
Sbjct: 579 LRWFVLDDYPWESLPSTF-DLKMLVHLELSRSS-LHYLWTETKHLPSLRRIDLSSSRRLR 636

Query: 369 ------GFPEIPFCN-IDGSGIERIPSSV--------LKLNKCSKLESLPSSLCM-FKSL 412
                 G P + + N +    +E +  S+        L LN C  L+  P   C+  +SL
Sbjct: 637 RTPDFTGMPNLEYLNMLYCRNLEEVHHSLRCCSKLIRLNLNNCKSLKRFP---CVNVESL 693

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA--LSKLKLKKCSSFE 470
             L +  C  LE+ P+  G ++   ++ ++G+GIRE+P S+ Q    ++KL L+      
Sbjct: 694 EYLSLEYCSSLEKFPEIHGRMKPEIQIHMQGSGIRELPSSITQYQTHITKLDLRGMEKLV 753

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +LPS +   KSL SL +  C     LP+E+G+LE L+ L    T I   P S+ +LS L+
Sbjct: 754 ALPSSICRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSIIRLSKLK 813

Query: 531 WLVLSDNNLQI---IPESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNL 585
                 +  ++   +P  +    SL +L L N NL    +PE +  LSSLK L L  NN 
Sbjct: 814 IFDFGSSKDRVHFELPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLKKLYLSGNNF 873

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP-NELSEIIKDGWMKQSVNGETYITK 644
           + +P  +        ++  +LR+ ++LRNC +L    E + ++   ++   + G +Y+ +
Sbjct: 874 EHLPRSI--------AQLGALRI-LELRNCKRLTQLPEFTGMLNLEYL--DLEGCSYLEE 922

Query: 645 SMYFPG 650
             +FPG
Sbjct: 923 VHHFPG 928


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 180/341 (52%), Gaps = 38/341 (11%)

Query: 49  FEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
           + W  FP    +    + LV L++  + +  LW + ++L SL+RIDL +SK LT+ PD +
Sbjct: 576 YPWESFP----STFELKMLVHLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFT 631

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
              NLE ++L  CS+L E H S+   +K+  L L+ CKSL   P  ++ + L+ L LR C
Sbjct: 632 GMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKSLKRFPC-VNVESLEYLGLRSC 690

Query: 169 SNLKNLPKMTS-CHLRSTLPLLGVGIEELPSSI-KCLSNIGELLIYSCKRLENISSSIFK 226
            +L+ LP++         + + G GI ELPSSI +  +++ +LL+++ K L  + SSI +
Sbjct: 691 DSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICR 750

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ--------PSSELKLKKCPRPESLPSG 278
           L+ L S+ +  C  L+ L     ++D  R  +         PSS ++L K          
Sbjct: 751 LKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLI-------- 802

Query: 279 QCMFKSLTSLEIIDCPNFERLP--DELGNLQALNRL---IIDGTAIRELPEGLGQLALLS 333
             MF+        D  +FE  P  + L +L+ LN     +IDG     LPE +G L+ L 
Sbjct: 803 ILMFRGFK-----DGVHFEFPPVAEGLHSLEYLNLSYCNLIDGG----LPEDIGSLSSLK 853

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           KL+L   +  E++ SSI +L +++S+++ +C  L   PE+P
Sbjct: 854 KLDLSR-NNFEHLPSSIAQLGALQSLDLKDCQRLTQLPELP 893



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 196/436 (44%), Gaps = 94/436 (21%)

Query: 328  QLALLSKLELKNCSELEYISSSIFKLKSVESIEIS------NCSNLKGFPEIPFCNI-DG 380
            +L +L  L+L++ S L ++ +    L S+  I++S         +  G P + + N+   
Sbjct: 586  ELKMLVHLQLRHNS-LRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQC 644

Query: 381  SGIERIPSSV--------LKLNKCSKLESLPSSLCM-FKSLTSLEIIDCKKLERLPDELG 431
            S +E +  S+        L LN C  L+  P   C+  +SL  L +  C  LE+LP+  G
Sbjct: 645  SNLEEVHHSLGCCSKVIGLYLNDCKSLKRFP---CVNVESLEYLGLRSCDSLEKLPEIYG 701

Query: 432  NLEALEELRVEGTGIREVPKSLAQLA--LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
             ++   ++ ++G+GIRE+P S+ Q    ++KL L    +  +LPS +   KSL SL +  
Sbjct: 702  RMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSG 761

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS---------------------- 527
            C     LP+EIG+L+ L+V     T I   P S+ +L+                      
Sbjct: 762  CSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFEFPPVA 821

Query: 528  ----SLEWLVLSDNNL--QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
                SLE+L LS  NL    +PE +  LSSL  L LS NN E +P  +  L +L+ LDL 
Sbjct: 822  EGLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQSLDLK 881

Query: 582  E-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL-----------KLDPNELSEIIKD 629
            +   L ++PE        +P E   L   VD    L           KL   +L +   D
Sbjct: 882  DCQRLTQLPE--------LPPELNELH--VDCHMALKFIHDLVTKRKKLHRVKLDDAHND 931

Query: 630  GW--------------MKQSVNGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTP 671
                            M+  ++    ++ +++    +P  +IP WF HQ   S++S+  P
Sbjct: 932  TMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYP-EKIPSWFHHQGWDSSVSVNLP 990

Query: 672  QPTGY--NKLMGFAFC 685
            +   Y  +K +GFA C
Sbjct: 991  E-NWYIPDKFLGFAVC 1005


>gi|297794589|ref|XP_002865179.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311014|gb|EFH41438.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1113

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 193/387 (49%), Gaps = 34/387 (8%)

Query: 6   SEIQINPYTFSKMTELRLLKF---CGSKNKCMVHSL----EGVPFTELRYFEWHQFPLKT 58
            E++I+   F  M  LR L+F      + K +  +L    +  P  +L+   W  +P+K 
Sbjct: 544 DELEIHKKAFKNMHNLRFLRFHINSWEREKEVEWNLPKKIDAFP-PKLKLLNWPGYPMKQ 602

Query: 59  LNI-LHWENLVSLKMPGSKVTQ-LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           L      + LV L+MP SK+ + LW+  ++L  LK +DL  S  L ++PDLS A NLE L
Sbjct: 603 LPAEFRPDKLVELRMPNSKILEKLWEGDKSLKFLKDMDLSGSLNLKEIPDLSKATNLETL 662

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  CSSL E  SSI  LNKL  L++  C +L +LPT    + L  L L GCS LK  P 
Sbjct: 663 NLNGCSSLVELPSSILNLNKLTDLNMAGCTNLEALPTG-KLESLIHLNLAGCSRLKIFPD 721

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI---YSCKRLENIS--SSIFKLQFLE 231
           +++    S L +     E  PS ++ L N+ EL +    S +  E +   +++  ++ L 
Sbjct: 722 ISNK--ISELIINKTAFEIFPSQLR-LENLVELSLEHTMSERLWEGVQPLTNLKTIKLLG 778

Query: 232 SIRIHRCPN------LQFLEMPSCN--IDGTRSKEQ---PSSELKLKKCPRPESLPSGQC 280
           S  +   PN      L+ L + +C+  ++ T S  Q     + L +  C   E+LP G  
Sbjct: 779 SENLKELPNLSMATSLETLNLNNCSSLVELTLSTIQNLNKLTSLDMIGCSSLETLPIG-I 837

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             KSL  L +  C      PD   N+     L ++ TAI E+P  +   + L  LE+  C
Sbjct: 838 NLKSLYRLNLNGCSQLRGFPDISNNITF---LFLNQTAIEEVPSHINNFSSLEALEMMGC 894

Query: 341 SELEYISSSIFKLKSVESIEISNCSNL 367
            EL++IS  +F+LK ++ +  S+C  L
Sbjct: 895 KELKWISPGLFELKDLDEVFFSDCKKL 921



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 197/426 (46%), Gaps = 55/426 (12%)

Query: 285  LTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSEL 343
            L  L + +    E+L +   +L+ L  + + G+  ++E+P+ L +   L  L L  CS L
Sbjct: 612  LVELRMPNSKILEKLWEGDKSLKFLKDMDLSGSLNLKEIPD-LSKATNLETLNLNGCSSL 670

Query: 344  EYISSSIFKLKSVESIEISNCSNLKGFP-----EIPFCNIDG-SGIERIPS-----SVLK 392
              + SSI  L  +  + ++ C+NL+  P      +   N+ G S ++  P      S L 
Sbjct: 671  VELPSSILNLNKLTDLNMAGCTNLEALPTGKLESLIHLNLAGCSRLKIFPDISNKISELI 730

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPK 451
            +NK +  E  PS L + ++L  L  ++    ERL + +  L  L+ +++ G+  ++E+P 
Sbjct: 731  INKTA-FEIFPSQLRL-ENLVELS-LEHTMSERLWEGVQPLTNLKTIKLLGSENLKELPN 787

Query: 452  SLAQLALSKLKLKKCSSFESLP-SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                 +L  L L  CSS   L  S +     LTSL++I C +   LP  I NL+ L  L 
Sbjct: 788  LSMATSLETLNLNNCSSLVELTLSTIQNLNKLTSLDMIGCSSLETLPIGI-NLKSLYRLN 846

Query: 511  IKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
            + G + +R  P+    ++   +L L+   ++ +P  +N  SSL +L++     L+ I   
Sbjct: 847  LNGCSQLRGFPDISNNIT---FLFLNQTAIEEVPSHINNFSSLEALEMMGCKELKWISPG 903

Query: 569  LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
            L  L  L   ++F ++  ++ E       S  +E T L + +   NC             
Sbjct: 904  LFELKDLD--EVFFSDCKKLGEV----KWSEKAEDTKLSV-ISFTNCF------------ 944

Query: 629  DGWMKQSVNGETYITKS----MYFPGNEIPKWFRHQSTGSTISLKTPQPT-GYNKLMGFA 683
                   +N E +I +S    M  PG E+P +F H+STG+++++     +      + F 
Sbjct: 945  ------YINQEIFIHQSASNYMILPG-EVPPYFTHRSTGNSLTIPLHHSSLSQQPFLDFK 997

Query: 684  FCVVVA 689
             CVVV+
Sbjct: 998  ACVVVS 1003


>gi|167998068|ref|XP_001751740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696838|gb|EDQ83175.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 491

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 216/489 (44%), Gaps = 37/489 (7%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTS 179
           C +LT     +  L  L   D+  CK+LTSL   + +   L +  + GC NL +LPK   
Sbjct: 1   CKNLTSLPKELGNLISLITFDIHGCKNLTSLRKELGNLISLIKFDIHGCKNLTSLPK--- 57

Query: 180 CHLRSTLPLLGVGIE------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
             L +   L    I        LP  +  L ++    I+ CK L ++   +  L  L + 
Sbjct: 58  -ELGNLTSLTTFDISWCEKLTSLPKDLGNLISLATFDIHGCKNLTSLPKELGNLTSLTTF 116

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            I     L  L     N+    +         +K+C    SLP       SLT+ +I  C
Sbjct: 117 DISWYEKLTSLPKELDNLISLTT-------FDIKECKNLISLPKQLSNLTSLTTFDISMC 169

Query: 294 PNFERLPDELGNLQA--LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            N   LP ELGNL +  L  + I    +  LP  LG L  L+  ++K C +L  +   + 
Sbjct: 170 TNLTSLPKELGNLTSLILFDISIGCENLTSLPNELGNLISLATFDIKECKKLTSLPKELD 229

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFK 410
            L S+   +IS C+NL   P+          ++++ S ++  +++   L SLP  L    
Sbjct: 230 NLTSLILFDISMCTNLTLLPKY---------LDKLTSLTIFDISRWMNLTSLPKELGNLT 280

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSS 468
           SLT+ ++  C+ L  LP ELG L +L   ++ +   +   PK L  L +L+   +  C +
Sbjct: 281 SLTTFDVSWCENLTSLPKELGKLISLVTFKMKQCKNLTSFPKELGNLISLTTFDISYCEN 340

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLS 527
             SLP       SL + +I  C+N   LP E+GNL  L    I   T +  +P+ L  L+
Sbjct: 341 LTSLPKESSNLTSLITFDISYCENLTSLPKELGNLTSLTTFDINMYTNLTSLPKELDNLT 400

Query: 528 SLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS--NNNLERIPERLDPLSSLKYLDL-FEN 583
           SL    +S   NL  + + L  L SL +  +S    NL  +P+ L  L SL   D+    
Sbjct: 401 SLTTFDISYCENLTSLSKELGNLISLTTFDISCLCTNLTSLPKELGNLISLTTFDISVYT 460

Query: 584 NLDRIPEYL 592
           NL  +P+ L
Sbjct: 461 NLTSLPKEL 469



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 211/478 (44%), Gaps = 34/478 (7%)

Query: 67  LVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSL 124
           L++  + G K +T L  ++ NL+SL + D+   K LT LP +L    +L   D+ +C  L
Sbjct: 17  LITFDIHGCKNLTSLRKELGNLISLIKFDIHGCKNLTSLPKELGNLTSLTTFDISWCEKL 76

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
           T     +  L  L   D+  CK+LTSLP  + +   L    +     L +LPK     L 
Sbjct: 77  TSLPKDLGNLISLATFDIHGCKNLTSLPKELGNLTSLTTFDISWYEKLTSLPK----ELD 132

Query: 184 STLPLLGVGIEE---LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR--- 237
           + + L    I+E   L S  K LSN+  L  +      N++S   +L  L S+ +     
Sbjct: 133 NLISLTTFDIKECKNLISLPKQLSNLTSLTTFDISMCTNLTSLPKELGNLTSLILFDISI 192

Query: 238 -CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C NL  L     N+    +         +K+C +  SLP       SL   +I  C N 
Sbjct: 193 GCENLTSLPNELGNLISLAT-------FDIKECKKLTSLPKELDNLTSLILFDISMCTNL 245

Query: 297 ERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             LP  L  L +L    I     +  LP+ LG L  L+  ++  C  L  +   + KL S
Sbjct: 246 TLLPKYLDKLTSLTIFDISRWMNLTSLPKELGNLTSLTTFDVSWCENLTSLPKELGKLIS 305

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           + + ++  C NL  FP+    N+       I  +   ++ C  L SLP       SL + 
Sbjct: 306 LVTFKMKQCKNLTSFPK-ELGNL-------ISLTTFDISYCENLTSLPKESSNLTSLITF 357

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
           +I  C+ L  LP ELGNL +L    +   T +  +PK L  L +L+   +  C +  SL 
Sbjct: 358 DISYCENLTSLPKELGNLTSLTTFDINMYTNLTSLPKELDNLTSLTTFDISYCENLTSLS 417

Query: 474 SRLYVSKSLTSLEI-IDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSL 529
             L    SLT+ +I   C N   LP E+GNL  L    I   T +  +P+ LG L+SL
Sbjct: 418 KELGNLISLTTFDISCLCTNLTSLPKELGNLISLTTFDISVYTNLTSLPKELGNLTSL 475



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 141/313 (45%), Gaps = 34/313 (10%)

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGF-PEIPFCNIDGSGIERIPSSVLKLNKCSK 398
           C  L  +   +  L S+ + +I  C NL     E+      G+ I  I      ++ C  
Sbjct: 1   CKNLTSLPKELGNLISLITFDIHGCKNLTSLRKEL------GNLISLIK---FDIHGCKN 51

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL- 456
           L SLP  L    SLT+ +I  C+KL  LP +LGNL +L    + G   +  +PK L  L 
Sbjct: 52  LTSLPKELGNLTSLTTFDISWCEKLTSLPKDLGNLISLATFDIHGCKNLTSLPKELGNLT 111

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TA 515
           +L+   +       SLP  L    SLT+ +I +CKN + LP ++ NL  L    I   T 
Sbjct: 112 SLTTFDISWYEKLTSLPKELDNLISLTTFDIKECKNLISLPKQLSNLTSLTTFDISMCTN 171

Query: 516 IREVPESLGQLSSLEWLVLSDN--NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPL 572
           +  +P+ LG L+SL    +S    NL  +P  L  L SL +  +     L  +P+ LD L
Sbjct: 172 LTSLPKELGNLTSLILFDISIGCENLTSLPNELGNLISLATFDIKECKKLTSLPKELDNL 231

Query: 573 SSLKYLDL-FENNLDRIPEYLRSFP-------------TSIPSEFTSLR--LSVDLRNCL 616
           +SL   D+    NL  +P+YL                 TS+P E  +L    + D+  C 
Sbjct: 232 TSLILFDISMCTNLTLLPKYLDKLTSLTIFDISRWMNLTSLPKELGNLTSLTTFDVSWCE 291

Query: 617 KLD--PNELSEII 627
            L   P EL ++I
Sbjct: 292 NLTSLPKELGKLI 304



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 164/406 (40%), Gaps = 40/406 (9%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           K+T L  D+ NL+SL   D+   K LT LP +L    +L   D+ +   LT     +  L
Sbjct: 75  KLTSLPKDLGNLISLATFDIHGCKNLTSLPKELGNLTSLTTFDISWYEKLTSLPKELDNL 134

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
             L   D+  CK+L SLP  + +   L    +  C+NL +LPK         L  + +G 
Sbjct: 135 ISLTTFDIKECKNLISLPKQLSNLTSLTTFDISMCTNLTSLPKELGNLTSLILFDISIGC 194

Query: 194 EEL---PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-----E 245
           E L   P+ +  L ++    I  CK+L ++   +  L  L    I  C NL  L     +
Sbjct: 195 ENLTSLPNELGNLISLATFDIKECKKLTSLPKELDNLTSLILFDISMCTNLTLLPKYLDK 254

Query: 246 MPSCNI-DGTRSKEQPS-----------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
           + S  I D +R     S           +   +  C    SLP       SL + ++  C
Sbjct: 255 LTSLTIFDISRWMNLTSLPKELGNLTSLTTFDVSWCENLTSLPKELGKLISLVTFKMKQC 314

Query: 294 PNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            N    P ELGNL +L    I     +  LP+    L  L   ++  C  L  +   +  
Sbjct: 315 KNLTSFPKELGNLISLTTFDISYCENLTSLPKESSNLTSLITFDISYCENLTSLPKELGN 374

Query: 353 LKSVESIEISNCSNLKGFPE-----IPFCNIDGSGIERIPSSVLKLNK------------ 395
           L S+ + +I+  +NL   P+           D S  E + S   +L              
Sbjct: 375 LTSLTTFDINMYTNLTSLPKELDNLTSLTTFDISYCENLTSLSKELGNLISLTTFDISCL 434

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           C+ L SLP  L    SLT+ +I     L  LP ELGNL +L +  +
Sbjct: 435 CTNLTSLPKELGNLISLTTFDISVYTNLTSLPKELGNLTSLTKFDI 480


>gi|13517480|gb|AAK28811.1|AF310966_1 resistance-like protein P-B [Linum usitatissimum]
          Length = 1211

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 213/467 (45%), Gaps = 61/467 (13%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------PFTEL-------RYFEWHQ 53
            E+ +    F  M  L  LKF   +     + L+ V      P+  L       R+ +W  
Sbjct: 595  EMYLKANAFEGMNSLTFLKFKSPELDYAQYPLKNVKTKIHLPYDGLNSLPEGLRWLQWDG 654

Query: 54   FPLKTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +P K+L    + ++LV L + GS + + W+  D   LV+L  +DL+Y   L  +PD+S +
Sbjct: 655  YPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDLRYCTNLIAIPDISSS 714

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
             NLE L L  C SL E    +QYL KL  LD++ CK+L  LP  + SK LK + ++G   
Sbjct: 715  LNLEELLLFGCRSLVEVPFHVQYLTKLVTLDINVCKNLKRLPPKLDSKLLKHVRMQGLG- 773

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS-----SSIF 225
            +   P++ S  L     L    + ELPS+I  +   G L ++     +NI+     ++I 
Sbjct: 774  ITRCPEIDSREL-EIFDLRFTSLGELPSAIYNVKQNGVLRLHG----KNITKFPGITTIL 828

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCN------------IDGTRSKE--------QPSSELK 265
            KL  L    I       + +    +            + G R  E          S EL 
Sbjct: 829  KLFTLSRTSIREIDLADYHQQHQTSDGLLLPRFQNLWLTGNRQLEVLPNSIWNMISEELY 888

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            + + P  ESLP       +LTSL +  C +   +P  + NL++L  L +  T I+ LP  
Sbjct: 889  IGRSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSS 948

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            + +L  L  + L++C  LE I +SI KL  + +  +S C ++   PE+P           
Sbjct: 949  IHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMSGCESIPSLPELP----------- 997

Query: 386  IPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
             P+   L++  C  L++LPS+ C    L  +   +C ++++ +P E 
Sbjct: 998  -PNLKELEVRDCKSLQALPSNTCKLLYLNRIYFEECPQVDQTIPAEF 1043



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 182/412 (44%), Gaps = 52/412 (12%)

Query: 285  LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            L +L+I  C N +RLP +L + + L  + + G  I   PE   +   +  L   +  EL 
Sbjct: 741  LVTLDINVCKNLKRLPPKLDS-KLLKHVRMQGLGITRCPEIDSRELEIFDLRFTSLGEL- 798

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
               S+I+ +K    + +    N+  FP I              +++LKL   S+      
Sbjct: 799  --PSAIYNVKQNGVLRLHG-KNITKFPGI--------------TTILKLFTLSR------ 835

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV-PKSLAQLALSKLKL 463
                  S+  +++ D  +  +  D L  L   + L + G    EV P S+  +   +L +
Sbjct: 836  -----TSIREIDLADYHQQHQTSDGLL-LPRFQNLWLTGNRQLEVLPNSIWNMISEELYI 889

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
             +    ESLP       +LTSL +  C++   +P  I NL  L+ L +  T I+ +P S+
Sbjct: 890  GRSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSI 949

Query: 524  GQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
             +L  L  + L D  +L+ IP S+++LS L +  +S    E IP   +   +LK L++  
Sbjct: 950  HELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMS--GCESIPSLPELPPNLKELEV-- 1005

Query: 583  NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
                R  + L++ P++        R+  +   C ++D    +E + +  +  S++     
Sbjct: 1006 ----RDCKSLQALPSNTCKLLYLNRIYFE--ECPQVDQTIPAEFMANFLVHASLSPS--Y 1057

Query: 643  TKSMYFPGNEIPKWFRHQSTG----STISLKTP---QPTGYNKLMGFAFCVV 687
             + +   G+E+PKWF ++S      ST+ ++ P       +  + G AF  V
Sbjct: 1058 ERQVRCSGSELPKWFSYRSMEDEDCSTVKVELPLANDSPDHPMIKGIAFGCV 1109


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
           thaliana]
          Length = 1193

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 188/387 (48%), Gaps = 53/387 (13%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E LV L M  SK+ +LW+  + L +LK +DL YS  L +LP+LS A NLE L L  CSSL
Sbjct: 641 EFLVELDMRYSKLQKLWEGTKQLRNLKWMDLSYSIDLQELPNLSTATNLEELKLRNCSSL 700

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP--------- 175
            E  SSI+ L  L+ LDL  C SL  LP+  ++  LK+L L  CS+L  LP         
Sbjct: 701 VELPSSIEKLTSLQRLDLQGCSSLVELPSFGNATKLKKLDLGNCSSLVKLPPSINANNLQ 760

Query: 176 --KMTSCHLRSTLPLLGVGIE-------------ELPSSIKCLSNIGELLIYSCKRLENI 220
              + +C     LP +    +             ELP SI   +N+ +L I  C  L  +
Sbjct: 761 ELSLINCSRVVKLPAIENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKL 820

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQC 280
            SSI  +  LE   +  C NL  +E+PS +I   R      + L ++ C + E+LP+   
Sbjct: 821 PSSIGDMTSLEGFDLSNCSNL--VELPS-SIGNLRK----LTLLLMRGCSKLETLPTNIN 873

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
           +  SL  L++ DC   +  P+   ++ +   L + GTAI+E+P  +      S+L +   
Sbjct: 874 LI-SLRILDLTDCSRLKSFPEISTHIDS---LYLIGTAIKEVPLSIMS---WSRLAVYKM 926

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKL 399
           S  E ++     L  +  +++S     K   E+P        ++R+    VL+LN C+ L
Sbjct: 927 SYFESLNEFPHALDIITELQLS-----KDIQEVP------PWVKRMSRLRVLRLNNCNNL 975

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERL 426
            SLP    +  SL  +   +CK LERL
Sbjct: 976 VSLPQ---LSDSLDYIYADNCKSLERL 999



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 189/419 (45%), Gaps = 80/419 (19%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L++ +C +   LP  +  L +L RL + G +++ ELP   G    L KL+L NCS 
Sbjct: 688  NLEELKLRNCSSLVELPSSIEKLTSLQRLDLQGCSSLVELP-SFGNATKLKKLDLGNCSS 746

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            L  +  SI    +++ + + NCS +   P I     + + +       LKL  CS L  L
Sbjct: 747  LVKLPPSI-NANNLQELSLINCSRVVKLPAIE----NATKLRE-----LKLQNCSSLIEL 796

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSK 460
            P S+    +L  L+I  C  L +LP  +G++ +LE   +   + + E+P S+  L  L+ 
Sbjct: 797  PLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRKLTL 856

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            L ++ CS  E+LP+ + +  SL  L++ DC      P+   +++ L ++   GTAI+EVP
Sbjct: 857  LLMRGCSKLETLPTNINLI-SLRILDLTDCSRLKSFPEISTHIDSLYLI---GTAIKEVP 912

Query: 521  ESLGQLSSLEWLVLS--------------------DNNLQIIPESLNQLSSLVSLKLSN- 559
             S+   S L    +S                      ++Q +P  + ++S L  L+L+N 
Sbjct: 913  LSIMSWSRLAVYKMSYFESLNEFPHALDIITELQLSKDIQEVPPWVKRMSRLRVLRLNNC 972

Query: 560  NNLERIPERLDPLS--------SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVD 611
            NNL  +P+  D L         SL+ LD   NN    PE    FP               
Sbjct: 973  NNLVSLPQLSDSLDYIYADNCKSLERLDCCFNN----PEIRLYFP--------------- 1013

Query: 612  LRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLK 669
               C KL+  E  ++I            T   +    PG ++P  F H++T G ++ +K
Sbjct: 1014 --KCFKLN-QEARDLIM----------HTSTVRCAMLPGTQVPACFNHRATSGDSLKIK 1059



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 188/389 (48%), Gaps = 67/389 (17%)

Query: 151 LPTSIHSKYLKRLVLR---------GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIK 201
           LP++ + ++L  L +R         G   L+NL  M   +         + ++ELP+ + 
Sbjct: 634 LPSTFNPEFLVELDMRYSKLQKLWEGTKQLRNLKWMDLSY--------SIDLQELPN-LS 684

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS 261
             +N+ EL + +C  L  + SSI KL  L+ + +  C +L  +E+PS   + T+ K+   
Sbjct: 685 TATNLEELKLRNCSSLVELPSSIEKLTSLQRLDLQGCSSL--VELPSFG-NATKLKK--- 738

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIR 320
             L L  C     LP       +L  L +I+C    +LP  + N   L  L +   +++ 
Sbjct: 739 --LDLGNCSSLVKLPPS-INANNLQELSLINCSRVVKLP-AIENATKLRELKLQNCSSLI 794

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG 380
           ELP  +G    L KL++  CS L  + SSI  + S+E  ++SNCSNL   P         
Sbjct: 795 ELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELP--------- 845

Query: 381 SGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
           S I  +   ++L +  CSKLE+LP+++ +  SL  L++ DC +L+  P+   ++++L  +
Sbjct: 846 SSIGNLRKLTLLLMRGCSKLETLPTNINLI-SLRILDLTDCSRLKSFPEISTHIDSLYLI 904

Query: 440 RVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP---------SRLYVSKS--------- 481
              GT I+EVP S+  ++ S+L + K S FESL          + L +SK          
Sbjct: 905 ---GTAIKEVPLSI--MSWSRLAVYKMSYFESLNEFPHALDIITELQLSKDIQEVPPWVK 959

Query: 482 ----LTSLEIIDCKNFMRLPDEIGNLEYL 506
               L  L + +C N + LP    +L+Y+
Sbjct: 960 RMSRLRVLRLNNCNNLVSLPQLSDSLDYI 988


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 180/341 (52%), Gaps = 38/341 (11%)

Query: 49  FEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
           + W  FP    +    + LV L++  + +  LW + ++L SL+RIDL +SK LT+ PD +
Sbjct: 584 YPWESFP----STFELKMLVHLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFT 639

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
              NLE ++L  CS+L E H S+   +K+  L L+ CKSL   P  ++ + L+ L LR C
Sbjct: 640 GMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKSLKRFPC-VNVESLEYLGLRSC 698

Query: 169 SNLKNLPKMTS-CHLRSTLPLLGVGIEELPSSI-KCLSNIGELLIYSCKRLENISSSIFK 226
            +L+ LP++         + + G GI ELPSSI +  +++ +LL+++ K L  + SSI +
Sbjct: 699 DSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICR 758

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ--------PSSELKLKKCPRPESLPSG 278
           L+ L S+ +  C  L+ L     ++D  R  +         PSS ++L K          
Sbjct: 759 LKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLI-------- 810

Query: 279 QCMFKSLTSLEIIDCPNFERLP--DELGNLQALNRL---IIDGTAIRELPEGLGQLALLS 333
             MF+        D  +FE  P  + L +L+ LN     +IDG     LPE +G L+ L 
Sbjct: 811 ILMFRGFK-----DGVHFEFPPVAEGLHSLEYLNLSYCNLIDGG----LPEEIGSLSSLK 861

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           KL+L   +  E++ SSI +L +++S+++ +C  L   PE+P
Sbjct: 862 KLDLSR-NNFEHLPSSIAQLGALQSLDLKDCQRLTQLPELP 901



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 196/436 (44%), Gaps = 94/436 (21%)

Query: 328  QLALLSKLELKNCSELEYISSSIFKLKSVESIEIS------NCSNLKGFPEIPFCNI-DG 380
            +L +L  L+L++ S L ++ +    L S+  I++S         +  G P + + N+   
Sbjct: 594  ELKMLVHLQLRHNS-LRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQC 652

Query: 381  SGIERIPSSV--------LKLNKCSKLESLPSSLCM-FKSLTSLEIIDCKKLERLPDELG 431
            S +E +  S+        L LN C  L+  P   C+  +SL  L +  C  LE+LP+  G
Sbjct: 653  SNLEEVHHSLGCCSKVIGLYLNDCKSLKRFP---CVNVESLEYLGLRSCDSLEKLPEIYG 709

Query: 432  NLEALEELRVEGTGIREVPKSLAQLA--LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
             ++   ++ ++G+GIRE+P S+ Q    ++KL L    +  +LPS +   KSL SL +  
Sbjct: 710  RMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSG 769

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS---------------------- 527
            C     LP+EIG+L+ L+V     T I   P S+ +L+                      
Sbjct: 770  CSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFEFPPVA 829

Query: 528  ----SLEWLVLSDNNL--QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
                SLE+L LS  NL    +PE +  LSSL  L LS NN E +P  +  L +L+ LDL 
Sbjct: 830  EGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQSLDLK 889

Query: 582  E-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL-----------KLDPNELSEIIKD 629
            +   L ++PE        +P E   L   VD    L           KL   +L +   D
Sbjct: 890  DCQRLTQLPE--------LPPELNELH--VDCHMALKFIHYLVTKRKKLHRVKLDDAHND 939

Query: 630  GW--------------MKQSVNGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTP 671
                            M+  ++    ++ +++    +P  +IP WF HQ   S++S+  P
Sbjct: 940  TMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYP-EKIPSWFHHQGWDSSVSVNLP 998

Query: 672  QPTGY--NKLMGFAFC 685
            +   Y  +K +GFA C
Sbjct: 999  E-NWYIPDKFLGFAVC 1013


>gi|227438289|gb|ACP30634.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1251

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 163/348 (46%), Gaps = 51/348 (14%)

Query: 11   NPYTFSKMTELRLLKF-----CGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
            NP  F KM  LRLLKF       S    + H LE +P  +LR   W  +PL +L      
Sbjct: 905  NPNIFEKMRNLRLLKFYYSEVINSVGVSLPHGLEYLP-GKLRLLHWEYYPLSSLPQSFDP 963

Query: 65   ENLVSLKMPGSKVTQLWDD--------------------------VQNLVSLKRIDLKYS 98
            +NL+ L +P S   +LW                            +Q+L  LK++ L YS
Sbjct: 964  KNLLELNLPNSCAKKLWKGKKASFKITILTIQLNMRNPEMLMMSLLQSLEKLKKMRLSYS 1023

Query: 99   KLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSK 158
              LTK+P  S A NLE+LDL  C+SL     SI YL KL  L+L  C  L S+P+++  +
Sbjct: 1024 CQLTKIPRFSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLNLKDCSKLESIPSTVVLE 1083

Query: 159  YLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
             L+ L + GCS L N P+++       L + G  I+E+P SIK L  +  L + + K L 
Sbjct: 1084 SLEVLNISGCSKLMNFPEISPN--VKQLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLV 1141

Query: 219  NISSSIFKLQFLESIRIHRCPNLQFLE--------MPSCNIDGTRSKEQPSS-------- 262
            N+ +SI KL+ LE++ +  C +L+           + S ++  T  KE  SS        
Sbjct: 1142 NLPTSICKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALE 1201

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
            EL+L +C    SLP      +       ID   F RL + LG L+ + 
Sbjct: 1202 ELRLTECRNLASLPDDVWSLRFKVEFRQIDTEKFSRLWNRLGWLKKVQ 1249



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 22/236 (9%)

Query: 287  SLEIIDCPNFERLPD-ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
            S ++   P F   P+ EL +L+  N L+        + + +  L  L  L LK+CS+LE 
Sbjct: 1023 SCQLTKIPRFSSAPNLELLDLEGCNSLV-------SISQSICYLTKLVSLNLKDCSKLES 1075

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEI-PFCN---IDGSGIERIPSSV--------LKL 393
            I S++  L+S+E + IS CS L  FPEI P      + G+ I+ IP S+        L L
Sbjct: 1076 IPSTVV-LESLEVLNISGCSKLMNFPEISPNVKQLYMGGTIIQEIPPSIKNLVLLEILDL 1134

Query: 394  NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
                 L +LP+S+C  K L +L +  C  LER P     ++ L+ L +  T I+E+  S+
Sbjct: 1135 ENSKHLVNLPTSICKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSV 1194

Query: 454  AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            + L AL +L+L +C +  SLP  ++  +       ID + F RL + +G L+ +++
Sbjct: 1195 SYLTALEELRLTECRNLASLPDDVWSLRFKVEFRQIDTEKFSRLWNRLGWLKKVQI 1250



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 24/247 (9%)

Query: 210  LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELK 265
            L+ S ++L+ +  S +  Q  +  R    PNL+ L++  CN    I  +         L 
Sbjct: 1008 LLQSLEKLKKMRLS-YSCQLTKIPRFSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLN 1066

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            LK C + ES+PS   + +SL  L I  C      P+   N++   +L + GT I+E+P  
Sbjct: 1067 LKDCSKLESIPS-TVVLESLEVLNISGCSKLMNFPEISPNVK---QLYMGGTIIQEIPPS 1122

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNI 378
            +  L LL  L+L+N   L  + +SI KLK +E++ +S CS+L+ FP        +   ++
Sbjct: 1123 IKNLVLLEILDLENSKHLVNLPTSICKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDL 1182

Query: 379  DGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
              + I+ + SSV        L+L +C  L SLP  +   +       ID +K  RL + L
Sbjct: 1183 SRTAIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLRFKVEFRQIDTEKFSRLWNRL 1242

Query: 431  GNLEALE 437
            G L+ ++
Sbjct: 1243 GWLKKVQ 1249



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 7/189 (3%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  CSKLES+PS++ + +SL  L I  C KL   P+   N++   +L + GT I+E+P
Sbjct: 1065 LNLKDCSKLESIPSTVVL-ESLEVLNISGCSKLMNFPEISPNVK---QLYMGGTIIQEIP 1120

Query: 451  KSLAQLALSK-LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+  L L + L L+      +LP+ +   K L +L +  C +  R P     ++ LK L
Sbjct: 1121 PSIKNLVLLEILDLENSKHLVNLPTSICKLKHLETLNLSGCSSLERFPGLSRKMKCLKSL 1180

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK-LSNNNLERIPE 567
             +  TAI+E+  S+  L++LE L L++  NL  +P+ +  L   V  + +      R+  
Sbjct: 1181 DLSRTAIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLRFKVEFRQIDTEKFSRLWN 1240

Query: 568  RLDPLSSLK 576
            RL  L  ++
Sbjct: 1241 RLGWLKKVQ 1249


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 194/434 (44%), Gaps = 90/434 (20%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++   ++L ++GT I+E+P S
Sbjct: 791  LRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSS 850

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            + +L  L  L L  C +  +LP  +    SL +L ++ C    +LP+ +G L+ L+ L +
Sbjct: 851  IQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYV 910

Query: 512  K------------------------GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
            K                           +RE+P  +  LSSL+ L L  N    IP+ +N
Sbjct: 911  KDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDGIN 970

Query: 548  QLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTS 605
            QL +L+   LS+   L+ IPE     SSL+YLD  + ++L+     + S P+++      
Sbjct: 971  QLYNLIVFDLSHCQMLQHIPEL---PSSLEYLDAHQCSSLE-----ILSSPSTL------ 1016

Query: 606  LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG-NEIPKWFRHQSTGS 664
              L   L  C K    E                E      M+ PG N IP W  HQ  GS
Sbjct: 1017 --LWSSLFKCFKSRIQEF---------------EVNFKVQMFIPGSNGIPGWISHQKNGS 1059

Query: 665  TISLKTPQPTGYN-KLMGFAFCVV-VACSVSECCRHESVEDDRKCNLFDVV--------C 714
             I+++ P+    N   +GFA C + V   + E  R    + +     F +V        C
Sbjct: 1060 KITMRLPRYWYENDDFLGFALCSLHVPLDIEEENRSFKCKLNFNNRAFLLVDDFWSKRNC 1119

Query: 715  DRRSEGYDS-------YTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSC 767
            +R   G +S       Y  S + K  H  +++  L +S            E+F       
Sbjct: 1120 ERCLHGDESNQVWLIYYPKSKIPKKYH-SNEYRTLNTSF----------SEYF---GTEP 1165

Query: 768  CEVKKCGIHFVHAQ 781
             +V++CG HF++AQ
Sbjct: 1166 VKVERCGFHFIYAQ 1179



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 36/269 (13%)

Query: 258  EQPS--SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
            E PS    L L+ C   +SLPS  C FKSLT+L    C   E  P+ L ++    +L +D
Sbjct: 781  ENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLD 840

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            GTAI+E+P                        SSI +L+ ++ + ++ C NL   PE   
Sbjct: 841  GTAIKEIP------------------------SSIQRLRGLQYLNLAYCENLVNLPE-SI 875

Query: 376  CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            CN+            L +  C KL  LP +L   +SL  L + D   +      L  L +
Sbjct: 876  CNLTS-------LRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCS 928

Query: 436  LEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            L  L++   G+RE+P  +  L +L  L L+  + F S+P  +    +L   ++  C+   
Sbjct: 929  LITLQLINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQ 987

Query: 495  RLPDEIGNLEYLKVLTIKGTAIREVPESL 523
             +P+   +LEYL         I   P +L
Sbjct: 988  HIPELPSSLEYLDAHQCSSLEILSSPSTL 1016



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%)

Query: 131  IQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
            I+  ++L+ L L  CK+L SLP+SI   K L  L   GCS L++ P+ +    +   L L
Sbjct: 780  IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDL 839

Query: 189  LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
             G  I+E+PSSI+ L  +  L +  C+ L N+  SI  L  L ++ +  CP L   ++P 
Sbjct: 840  DGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLN--KLPE 897

Query: 249  CNIDGTRSKEQ-PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+   +S E     +L    C  P SL SG C   SL +L++I+C     +P  + +L 
Sbjct: 898  -NLGRLQSLEYLYVKDLDSMNCQLP-SL-SGLC---SLITLQLINC-GLREIPSGIWHLS 950

Query: 308  ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            +L  L + G     +P+G+ QL  L   +L +C  L++I        S+E ++   CS+L
Sbjct: 951  SLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELP---SSLEYLDAHQCSSL 1007

Query: 368  K 368
            +
Sbjct: 1008 E 1008



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 138/316 (43%), Gaps = 63/316 (19%)

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           D   L+R P+  GN+  L EL + GT I+ +P SL               FE L      
Sbjct: 362 DLISLKRFPEIKGNMRKLRELDLSGTAIKVLPSSL---------------FEHL------ 400

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSD 536
            K+L  L         ++P +I  L  L+VL +    I E  +P  +  LSSL+ L L  
Sbjct: 401 -KALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKS 459

Query: 537 NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           N+ + IP ++NQLS L  L LS+  NL+ IPE     SSL+ LD   +N           
Sbjct: 460 NDFRSIPATINQLSRLQVLNLSHCQNLQHIPEL---PSSLRLLDAHGSN----------- 505

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELS-EIIKDGWMKQSVNGETYITKS--MYFPGNE 652
           PTS  + F  +     L NC   +  +L+     + W + SV+  TY +K   +  PG+ 
Sbjct: 506 PTSSRASFLPVH---SLVNCFNSEIQDLNCSSRNEVWSENSVS--TYGSKGICIVLPGSS 560

Query: 653 -IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFAFCVVVACSVSECCRHESVEDDRKCNLF 710
            +P+W         I+ + PQ     N+ +GFA C V               DD   ++ 
Sbjct: 561 GVPEWIMDD---QGIATELPQNWNQNNEFLGFALCCVYV-----------PLDDESEDVS 606

Query: 711 DVVCDRRSEGYDSYTS 726
           +   D RSE   ++TS
Sbjct: 607 ENESDNRSEDESAHTS 622



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
           + ++E+P       L  L L+ C + +SLPS +   KSLT+L    C      P+ + ++
Sbjct: 772 SDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDM 831

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL-KLSNNN 561
              + L + GTAI+E+P S+ +L  L++L L+   NL  +PES+  L+SL +L  +S   
Sbjct: 832 VVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPK 891

Query: 562 LERIPERLDPLSSLKYL 578
           L ++PE L  L SL+YL
Sbjct: 892 LNKLPENLGRLQSLEYL 908



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ-LALLSKLELKNCSELEYISSSI 350
           D  + +R P+  GN++ L  L + GTAI+ LP  L + L  L  L  +  S+L  I   I
Sbjct: 362 DLISLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDI 421

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMF 409
             L S+E +++S+C+ ++G      C++         SS+ +LN K +   S+P+++   
Sbjct: 422 CCLSSLEVLDLSHCNIMEGGIPSDICHL---------SSLKELNLKSNDFRSIPATINQL 472

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALE 437
             L  L +  C+ L+ +P+   +L  L+
Sbjct: 473 SRLQVLNLSHCQNLQHIPELPSSLRLLD 500



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 15/203 (7%)

Query: 56  LKTL--NILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           LK+L  +I  +++L +L   G S++    + ++++V  +++DL  + +      +   + 
Sbjct: 797 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 856

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP------TSIHSKYLKRLVLR 166
           L+ L+L YC +L     SI  L  L  L +  C  L  LP       S+   Y+K L   
Sbjct: 857 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSM 916

Query: 167 GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
            C     LP ++      TL L+  G+ E+PS I  LS++  L +    R  +I   I +
Sbjct: 917 NC----QLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQ 971

Query: 227 LQFLESIRIHRCPNLQFL-EMPS 248
           L  L    +  C  LQ + E+PS
Sbjct: 972 LYNLIVFDLSHCQMLQHIPELPS 994



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 22/176 (12%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENL 67
           IQ    +F +M  LRLLK         +H  +      L+     +FP    N+     L
Sbjct: 337 IQFAKESFKQMDRLRLLK---------IHKGDEYDLISLK-----RFPEIKGNM---RKL 379

Query: 68  VSLKMPGSKVTQLWDDV-QNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSL- 124
             L + G+ +  L   + ++L +L+ +  + S  L K+P D+    +LE+LDL +C+ + 
Sbjct: 380 RELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIME 439

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
               S I +L+ L+ L+L +     S+P +I+    L+ L L  C NL+++P++ S
Sbjct: 440 GGIPSDICHLSSLKELNL-KSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPS 494


>gi|296081088|emb|CBI18282.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 149/324 (45%), Gaps = 65/324 (20%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++E L++L + G+ I+E+P
Sbjct: 265 LCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIP 324

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+ +L  L  L L  C +  +LP  +    SL +L I  C    +LP+ +G L+ L++L
Sbjct: 325 SSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEIL 384

Query: 510 TIK------------------------GTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
            +K                           +RE+P  +  L+SL+ LVL  N    IP+ 
Sbjct: 385 YVKDFDSMNCQFPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSIPDG 444

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
           ++QL  L+ L LS+  L                      L  IPE   +  T +  + TS
Sbjct: 445 ISQLHKLIVLNLSHCKL----------------------LQHIPEPPSNLRTLVAHQCTS 482

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG---ETYITKSMYFPGNEIPKWFRHQST 662
           L++S  L           S   K G  K    G   +T+I +S     N IP+W  HQ  
Sbjct: 483 LKISSSLL---------WSPFFKSGIQKFVPRGKVLDTFIPES-----NGIPEWISHQKK 528

Query: 663 GSTISLKTPQPTGYN-KLMGFAFC 685
           GS I+L  PQ    N   +GFA C
Sbjct: 529 GSKITLTLPQNWYENDDFLGFALC 552



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 17/231 (7%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   +SLPS  C FKSLT+L    C   E  P+ L +++ L +L + G+AI+E+P
Sbjct: 265 LCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIP 324

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             + +L  L  L L  C  L  +  SI  L S++++ I +C  LK  PE          +
Sbjct: 325 SSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPE---------NL 375

Query: 384 ERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            R+ S  +L +     +     SL    SL  L +I+C  L  +P  + +L +L+ L + 
Sbjct: 376 GRLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLM 434

Query: 443 GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS-----RLYVSKSLTSLEI 487
           G     +P  ++QL  L  L L  C   + +P      R  V+   TSL+I
Sbjct: 435 GNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVAHQCTSLKI 485



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 128/259 (49%), Gaps = 25/259 (9%)

Query: 136 KLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
           +L+ L L  CK L SLP+SI   K L  L   GCS L++ P+ +    +   L L G  I
Sbjct: 261 ELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAI 320

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
           +E+PSSI+ L  + +L +  CK L N+  SI  L  L+++ I  CP L+  ++P  N+  
Sbjct: 321 KEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELK--KLPE-NLGR 377

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS------LEIIDCPNFERLPDELGNLQ 307
            +S E     L +K         S  C F SL+       L +I+C     +P  + +L 
Sbjct: 378 LQSLEI----LYVK------DFDSMNCQFPSLSGLCSLRILRLINC-GLREIPSGICHLT 426

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           +L  L++ G     +P+G+ QL  L  L L +C  L++I      L+++ + +   C++L
Sbjct: 427 SLQCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVAHQ---CTSL 483

Query: 368 KGFPEIPFCNIDGSGIERI 386
           K    + +     SGI++ 
Sbjct: 484 KISSSLLWSPFFKSGIQKF 502



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           ++++  LK++DL  S +      +   + L+ L+L YC +L     SI  L  L+ L + 
Sbjct: 304 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 363

Query: 144 RCKSLTSLP------TSIHSKYLKRLVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEEL 196
            C  L  LP       S+   Y+K      C      P ++  C LR  L L+  G+ E+
Sbjct: 364 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQ----FPSLSGLCSLR-ILRLINCGLREI 418

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
           PS I  L+++ + L+    +  +I   I +L  L  + +  C  LQ +  P  N+
Sbjct: 419 PSGICHLTSL-QCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNL 472


>gi|2245043|emb|CAB10461.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268437|emb|CAB80957.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1256

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 191/418 (45%), Gaps = 68/418 (16%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            +L+   W   P+K L +    E LV L+M  S + +LWD  Q L SLK + L  SK L +
Sbjct: 711  KLKRLWWDYCPVKRLPSNFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKE 770

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            +PDLSLA NLE L L  C SL    SSIQ   KL  LD+  CK L S PT ++ + L+ L
Sbjct: 771  IPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDLNLESLEYL 830

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L GC NL+N P                 I+   S  + L +  E+ +  C   +N+ + 
Sbjct: 831  NLTGCPNLRNFP----------------AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAG 874

Query: 224  IFKLQFLESIRIHRC----PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
            +  L  L  +R   C      L FL++  C                     + E L  G 
Sbjct: 875  LDYLDCL--MRCMPCEFRPEYLTFLDVSGC---------------------KHEKLWEGI 911

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
                SL  +++ +  N   +PD L     L RL ++G  ++  LP  +G L  L +LE+K
Sbjct: 912  QSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMK 970

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPS------ 388
             C+ LE + + +  L S+  +++S CS+L+ FP     I    ++ + IE +P       
Sbjct: 971  ECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLT 1029

Query: 389  --SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
              SVL +  C +L+++  ++    SL   +  DC+         G ++AL +  V  T
Sbjct: 1030 RLSVLLMYCCQRLKNISPNIFRLTSLMVADFTDCR---------GVIKALSDATVVAT 1078



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 236/524 (45%), Gaps = 89/524 (16%)

Query: 51   WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
            W+  PLK+L +    E LV+L M  SK+ +LW+    L SLK++DL  S  L ++PDLSL
Sbjct: 580  WNYCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSL 639

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
            A NLE                         L+L +C+SL +LP+SI +            
Sbjct: 640  AINLE------------------------ELNLSKCESLVTLPSSIQN------------ 663

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
                     +  LR TL   GV + +L  S++ + N+ E L      +E     I+  + 
Sbjct: 664  ---------AIKLR-TLYCSGVLLIDL-KSLEGMCNL-EYLSVDWSSMEGTQGLIYLPRK 711

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
            L+ +    CP      +PS        K +   EL+++     E L  G     SL  + 
Sbjct: 712  LKRLWWDYCP---VKRLPS------NFKAEYLVELRMENSDL-EKLWDGTQPLGSLKEMY 761

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +      + +PD L     L RL + G  ++  LP  +     L  L++++C +LE   +
Sbjct: 762  LHGSKYLKEIPD-LSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPT 820

Query: 349  SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSL- 406
             +  L+S+E + ++ C NL+ FP I    +  S  E +   + +++  C   ++LP+ L 
Sbjct: 821  DL-NLESLEYLNLTGCPNLRNFPAI---KMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 876

Query: 407  ----------CMFKS--LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSL 453
                      C F+   LT L++  CK  E+L + + +L +L+ + + E   + E+P   
Sbjct: 877  YLDCLMRCMPCEFRPEYLTFLDVSGCKH-EKLWEGIQSLGSLKRMDLSESENLTEIPDLS 935

Query: 454  AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                L +L L  C S  +LPS +     L  LE+ +C     LP ++ NL  L +L + G
Sbjct: 936  KATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSG 994

Query: 514  -TAIREVPESLGQLSSLEWLVLSDNNLQIIP---ESLNQLSSLV 553
             +++R  P      + +E L L +  ++ +P   E L +LS L+
Sbjct: 995  CSSLRTFPLI---STRIECLYLENTAIEEVPCCIEDLTRLSVLL 1035



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 45/310 (14%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSI---FKLKSV--ESIEISNCSNLKGFPEI 373
           ++E+P+ L     L +L L  C  L  + SSI    KL+++    + + +  +L+G   +
Sbjct: 631 LKEIPD-LSLAINLEELNLSKCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNL 689

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEI-IDCKKLER 425
            + ++D S +E     +    K  +L       + LPS+   FK+   +E+ ++   LE+
Sbjct: 690 EYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSN---FKAEYLVELRMENSDLEK 746

Query: 426 LPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           L D    L +L+E+ + G+  ++E+P     + L +L L  C S  +LPS +  +  L +
Sbjct: 747 LWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLIN 806

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNN-LQI- 541
           L++ DCK     P ++ NLE L+ L + G   +R  P      S  E  +L D N +++ 
Sbjct: 807 LDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSYFE--ILQDRNEIEVE 863

Query: 542 -------IPESLNQLSSLVS-------------LKLSNNNLERIPERLDPLSSLKYLDLF 581
                  +P  L+ L  L+              L +S    E++ E +  L SLK +DL 
Sbjct: 864 DCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLS 923

Query: 582 EN-NLDRIPE 590
           E+ NL  IP+
Sbjct: 924 ESENLTEIPD 933


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 153/324 (47%), Gaps = 60/324 (18%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++   ++L ++GT I+E+P
Sbjct: 1125 LCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIP 1184

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+ +L  L  L L  C +  +LP  +    SL +L ++ C    +LP+ +G L+ L+ L
Sbjct: 1185 SSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYL 1244

Query: 510  TIK------------------------GTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
             +K                           +RE+P  +  LSSL+ L L  N    IP+ 
Sbjct: 1245 YVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDG 1304

Query: 546  LNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEF 603
            +NQL +L+   LS+   L+ IPE     SSL+YLD  + ++L+     + S P+++    
Sbjct: 1305 INQLYNLIVFDLSHCQMLQHIPEL---PSSLEYLDAHQCSSLE-----ILSSPSTL---- 1352

Query: 604  TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG-NEIPKWFRHQST 662
                L   L  C K    E                E      M+ PG N IP W  HQ  
Sbjct: 1353 ----LWSSLFKCFKSRIQEF---------------EVNFKVQMFIPGSNGIPGWISHQKN 1393

Query: 663  GSTISLKTPQPTGYN-KLMGFAFC 685
            GS I+++ P+    N   +GFA C
Sbjct: 1394 GSKITMRLPRYWYENDDFLGFALC 1417



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 188/440 (42%), Gaps = 82/440 (18%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL----K 354
           LP +      L  L  DG ++  LP         +    K+  EL    S+I +L    K
Sbjct: 589 LPRDFEFSSKLTYLHWDGYSLESLP---------TNFHAKDLVELILRGSNIKQLWRGNK 639

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
               +++ N +      EIP    D S +  +   +L L  C KLE LP  +  +K L +
Sbjct: 640 LHNELKVINLNYSVHLTEIP----DFSSVPNL--EILTLEGCVKLECLPRGIYKWKYLQT 693

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L    C KL+R P+  GN+  L EL + GT I+ +P SL               FE L  
Sbjct: 694 LSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSL---------------FEHL-- 736

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWL 532
                K+L  L         ++P +I  L  L+VL +    I E  +P  +  LSSL+ L
Sbjct: 737 -----KALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKEL 791

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
            L  N+ + IP ++NQLS L  L LS+  NL+ IPE     SSL+ LD   +N       
Sbjct: 792 NLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPEL---PSSLRLLDAHGSN------- 841

Query: 592 LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS-EIIKDGWMKQSVNGETYITKS--MYF 648
               PTS  + F  +     L NC   +  +L+     + W + SV+  TY +K   +  
Sbjct: 842 ----PTSSRASFLPVH---SLVNCFNSEIQDLNCSSRNEVWSENSVS--TYGSKGICIVL 892

Query: 649 PGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFAFCVVVACSVSECCRHESVEDDRK 706
           PG+  +P+W         I+ + PQ     N+ +GFA C V               DD  
Sbjct: 893 PGSSGVPEWIMDD---QGIATELPQNWNQNNEFLGFALCCVYV-----------PLDDES 938

Query: 707 CNLFDVVCDRRSEGYDSYTS 726
            ++ +   D RSE   ++TS
Sbjct: 939 EDVSENESDNRSEDESAHTS 958



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 36/269 (13%)

Query: 258  EQPS--SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
            E PS    L L+ C   +SLPS  C FKSLT+L    C   E  P+ L ++    +L +D
Sbjct: 1117 ENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLD 1176

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            GTAI+E+P                        SSI +L+ ++ + ++ C NL   PE   
Sbjct: 1177 GTAIKEIP------------------------SSIQRLRGLQYLNLAYCENLVNLPE-SI 1211

Query: 376  CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            CN+            L +  C KL  LP +L   +SL  L + D   +      L  L +
Sbjct: 1212 CNL-------TSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCS 1264

Query: 436  LEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            L  L++   G+RE+P  +  L +L  L L+  + F S+P  +    +L   ++  C+   
Sbjct: 1265 LITLQLINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQ 1323

Query: 495  RLPDEIGNLEYLKVLTIKGTAIREVPESL 523
             +P+   +LEYL         I   P +L
Sbjct: 1324 HIPELPSSLEYLDAHQCSSLEILSSPSTL 1352



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 138/360 (38%), Gaps = 100/360 (27%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF----------------TELRYFEW 51
           IQ    +F +M  LRLLK        ++      P+                ++L Y  W
Sbjct: 545 IQFAKESFKQMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEFSSKLTYLHW 604

Query: 52  HQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
             + L++L    H ++LV L + GS + QLW   +    LK I+L YS  LT++PD S  
Sbjct: 605 DGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSV 664

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS 169
            NLEI                        L L+ C  L  LP  I+  KYL+ L  RGCS
Sbjct: 665 PNLEI------------------------LTLEGCVKLECLPRGIYKWKYLQTLSCRGCS 700

Query: 170 NLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
            LK  P++   ++R    L L G  I+ LPSS+                           
Sbjct: 701 KLKRFPEIKG-NMRKLRELDLSGTAIKVLPSSL--------------------------F 733

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
           + L+++ I                            L  +   +   +P   C   SL  
Sbjct: 734 EHLKALEI----------------------------LSFRMSSKLNKIPIDICCLSSLEV 765

Query: 288 LEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           L++  C   E  +P ++ +L +L  L +     R +P  + QL+ L  L L +C  L++I
Sbjct: 766 LDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHI 825



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%)

Query: 131  IQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
            I+  ++L+ L L  CK+L SLP+SI   K L  L   GCS L++ P+ +    +   L L
Sbjct: 1116 IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDL 1175

Query: 189  LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
             G  I+E+PSSI+ L  +  L +  C+ L N+  SI  L  L ++ +  CP L   ++P 
Sbjct: 1176 DGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLN--KLPE 1233

Query: 249  CNIDGTRSKEQ-PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+   +S E     +L    C  P SL SG C   SL +L++I+C     +P  + +L 
Sbjct: 1234 -NLGRLQSLEYLYVKDLDSMNCQLP-SL-SGLC---SLITLQLINC-GLREIPSGIWHLS 1286

Query: 308  ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            +L  L + G     +P+G+ QL  L   +L +C  L++I        S+E ++   CS+L
Sbjct: 1287 SLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELP---SSLEYLDAHQCSSL 1343

Query: 368  K 368
            +
Sbjct: 1344 E 1344



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 67/309 (21%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
            ++ +KL  L  D   SL SLPT+ H+K L  L+LRG SN+K L +    H         
Sbjct: 593 FEFSSKLTYLHWDG-YSLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLH--------- 641

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
                            EL              +  L +  S+ +   P+  F  +P+  
Sbjct: 642 ----------------NEL-------------KVINLNY--SVHLTEIPD--FSSVPNLE 668

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           I            L L+ C + E LP G   +K L +L    C   +R P+  GN++ L 
Sbjct: 669 I------------LTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLR 716

Query: 311 RLIIDGTAIRELPEGLGQ-LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
            L + GTAI+ LP  L + L  L  L  +  S+L  I   I  L S+E +++S+C+ ++G
Sbjct: 717 ELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEG 776

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                 C++         SS+ +LN K +   S+P+++     L  L +  C+ L+ +P+
Sbjct: 777 GIPSDICHL---------SSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPE 827

Query: 429 ELGNLEALE 437
              +L  L+
Sbjct: 828 LPSSLRLLD 836



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 444  TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + ++E+P       L  L L+ C + +SLPS +   KSLT+L    C      P+ + ++
Sbjct: 1108 SDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDM 1167

Query: 504  EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL-KLSNNN 561
               + L + GTAI+E+P S+ +L  L++L L+   NL  +PES+  L+SL +L  +S   
Sbjct: 1168 VVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPK 1227

Query: 562  LERIPERLDPLSSLKYL 578
            L ++PE L  L SL+YL
Sbjct: 1228 LNKLPENLGRLQSLEYL 1244



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 15/203 (7%)

Query: 56   LKTL--NILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
            LK+L  +I  +++L +L   G S++    + ++++V  +++DL  + +      +   + 
Sbjct: 1133 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 1192

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP------TSIHSKYLKRLVLR 166
            L+ L+L YC +L     SI  L  L  L +  C  L  LP       S+   Y+K L   
Sbjct: 1193 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSM 1252

Query: 167  GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
             C     LP ++      TL L+  G+ E+PS I  LS++  L +    R  +I   I +
Sbjct: 1253 NC----QLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQ 1307

Query: 227  LQFLESIRIHRCPNLQFL-EMPS 248
            L  L    +  C  LQ + E+PS
Sbjct: 1308 LYNLIVFDLSHCQMLQHIPELPS 1330


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 6/236 (2%)

Query: 11  NPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLVS 69
           N   FSKMT+LRLLK     N  +    E +   +LR+ EW+ +P K+L   L  + LV 
Sbjct: 588 NMKAFSKMTKLRLLKI---DNVQLSEGPEDLS-NKLRFLEWNSYPSKSLPAGLQVDELVE 643

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L M  S + QLW   ++ V+LK I+L  S  L+K PDL+   NLE L +  C+SL+E H 
Sbjct: 644 LHMANSSIEQLWYGYKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLIIEGCTSLSEVHP 703

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRSTLPL 188
           S+ +  KL+ ++L  CKS+  LP ++  + LK   L GCS L+  P +  + +    L L
Sbjct: 704 SLAHHKKLQYMNLVNCKSIRILPNNLEMESLKICTLDGCSKLEKFPDIVGNMNELMVLRL 763

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
              GI EL SSI+ L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+++
Sbjct: 764 DETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSGCSELKYI 819



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 153/384 (39%), Gaps = 97/384 (25%)

Query: 409 FKSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKL 463
           +KS  +L+II+      L + PD L  +  LE L +EG T + EV  SLA    L  + L
Sbjct: 658 YKSAVNLKIINLSNSLNLSKTPD-LTGIPNLESLIIEGCTSLSEVHPSLAHHKKLQYMNL 716

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
             C S   LP+ L + +SL    +  C    + PD +GN+  L VL +  T I E+  S+
Sbjct: 717 VNCKSIRILPNNLEM-ESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSI 775

Query: 524 GQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
             L  L  L ++   NL+ IP S+  L SL  L LS              S LKY+    
Sbjct: 776 RHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSG------------CSELKYI---P 820

Query: 583 NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            NL ++ E L  F   + +  T   ++V                                
Sbjct: 821 ENLGKV-ESLEEF-DGLSNPRTGFGIAV-------------------------------- 846

Query: 643 TKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVE 702
                 PGNEIP WF HQS GS+IS++ P  +     MGF  CV  +       R     
Sbjct: 847 ------PGNEIPGWFNHQSKGSSISVQVPSWS-----MGFVACVAFSAYGERPLR----- 890

Query: 703 DDRKCNLFDVVCDRRSEGYDSYTSSYLGKIS----HVESDHVFLGSSIFAGENSCKRSD- 757
                      CD ++ G ++Y S  L  IS     V SDH++L    F      K    
Sbjct: 891 -----------CDFKANGRENYPS--LMCISCNSIQVLSDHIWLFYLSFDYLKELKEWQH 937

Query: 758 ------EFFFHIDRSCCEVKKCGI 775
                 E  FH      +VK CG+
Sbjct: 938 ESFSNIELSFHSYERRVKVKNCGV 961



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 21/177 (11%)

Query: 282 FKSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
           +KS  +L+II+  N     + PD L  +  L  LII+G T++ E+   L     L  + L
Sbjct: 658 YKSAVNLKIINLSNSLNLSKTPD-LTGIPNLESLIIEGCTSLSEVHPSLAHHKKLQYMNL 716

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV 390
            NC  +  + +++ +++S++   +  CS L+ FP+I           +D +GI  + SS+
Sbjct: 717 VNCKSIRILPNNL-EMESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSI 775

Query: 391 --------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                   L +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE 
Sbjct: 776 RHLIGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSGCSELKYIPENLGKVESLEEF 832



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 239 PNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           PNL+ L +  C     +  + +  +    + L  C     LP+   M +SL    +  C 
Sbjct: 685 PNLESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLEM-ESLKICTLDGCS 743

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
             E+ PD +GN+  L  L +D T I EL   +  L  L  L + +C  LE I SSI  LK
Sbjct: 744 KLEKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLK 803

Query: 355 SVESIEISNCSNLKGFPE 372
           S++ +++S CS LK  PE
Sbjct: 804 SLKKLDLSGCSELKYIPE 821


>gi|357468521|ref|XP_003604545.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505600|gb|AES86742.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1092

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 134/260 (51%), Gaps = 22/260 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGS-------------KNKCMV---HSLEGVPFTELRYFE 50
           ++ ++ + F+KMT L+ L F G                 C+V     L+  P T+LRY  
Sbjct: 597 KLMLSSHAFAKMTNLQFLDFRGEYEFGEDFLWNQKYDRDCLVLLPQGLQSFP-TDLRYLS 655

Query: 51  WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
           W  +PLK+       +NLV L +  S V +LW  VQ+LV+LK + L YSK L +LPD S 
Sbjct: 656 WMNYPLKSFPEKFSAKNLVILDLSDSLVEKLWCGVQDLVNLKEVRLSYSKFLKELPDFSK 715

Query: 110 AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
           A NL++L++ +C +L   H SI  L+KL  LDL  C SLT+  ++ H   L  L L  C 
Sbjct: 716 ATNLKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSHLSSLHYLNLGSCK 775

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           +L+     T   +   L L  + I  LPSS  C S + E+L+     +E+I SSI  L  
Sbjct: 776 SLRTFSVTTYNLIE--LDLTNICINALPSSFGCQSRL-EILVLRYSEIESIPSSIKNLTR 832

Query: 230 LESIRIHRCPNLQFL-EMPS 248
           L  + I  C  L  L E+PS
Sbjct: 833 LRKLDIRFCSKLLVLPELPS 852



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 150/355 (42%), Gaps = 57/355 (16%)

Query: 421  KKLERLPD--ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY 477
            K L+ LPD  +  NL+ L         ++ V  S+  L  L  L L  C S  +  S  +
Sbjct: 705  KFLKELPDFSKATNLKVLNMAHCHN--LKSVHPSIFSLDKLVHLDLSLCFSLTTFASNSH 762

Query: 478  VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
            +S SL  L +  CK+         NL  L +  I    I  +P S G  S LE LVL  +
Sbjct: 763  LS-SLHYLNLGSCKSLRTFSVTTYNLIELDLTNI---CINALPSSFGCQSRLEILVLRYS 818

Query: 538  NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
             ++ IP S+  L+ L  L +   + L  +PE    + +L    L E  +L  +      F
Sbjct: 819  EIESIPSSIKNLTRLRKLDIRFCSKLLVLPELPSSVETL----LVECRSLKTVL-----F 869

Query: 596  PTSIPSEFTSLRLSVDLRNCLKLDPNELSEI--------IKDGWMKQSV----NGETYIT 643
            P+++  +F   +  ++  NC  LD + L  I        IK  +   S     + E+Y+ 
Sbjct: 870  PSTVSEQFKENKKRIEFWNCWNLDEHSLINIGLNLQMNLIKFTYQHLSTLEHDHVESYVD 929

Query: 644  --------KSMY-FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSE 694
                    +++Y +PG+ IP+W  +++T   + +    P   + L+GF FC V+A  +  
Sbjct: 930  YKDNFDSYQAVYVYPGSSIPEWLEYKTTKDDMIVDL-SPHYLSPLLGFVFCFVLAKDIHY 988

Query: 695  CCRHE------SVEDDRKCNLFDVVCDRRSEG---------YDSYTSSYLGKISH 734
            C R E        E D +    ++  DR   G         YD   S YL  I++
Sbjct: 989  CDRIELNITTNDAEGDDEKGGVNIYMDRTRLGIASDHVCMIYDQPFSHYLTSIAN 1043


>gi|297842711|ref|XP_002889237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297335078|gb|EFH65496.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 753

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 164/336 (48%), Gaps = 25/336 (7%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKN-----KCMVHSLEGVPFTELRYFEWHQFPLKTL- 59
           +E+   P  FS+   L+LLKF    N       M+  L+ +P   LRY  W  + LK+L 
Sbjct: 311 NELNKTPEIFSRRPNLKLLKFYSHSNIKQSRTRMIDGLDYLP--TLRYLRWDAYNLKSLP 368

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +     +LV L +  S +   W+  Q+L +L+ ++L   K LT+ PDLS A NLE L L 
Sbjct: 369 SQFCMTSLVELNLSHSSIETAWNGTQDLANLRSLNLTSCKHLTEFPDLSKATNLETLKLY 428

Query: 120 YCSSLTET-HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
            C++L E   SS+  LNKL  L L  CK L +LP +I+ K L+ L L GCS L+  P ++
Sbjct: 429 NCNNLVEIPESSLTQLNKLVHLKLSDCKKLRNLPNNINLKSLRFLHLDGCSCLEEFPFIS 488

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
               +  L L    I+ +P SI+ LS + EL +  CKRL N+  +I  L  L  + +  C
Sbjct: 489 ETIEK--LLLNETTIQYVPPSIERLSRLKELRLSGCKRLMNLPHNIKNLTSLIDLGLANC 546

Query: 239 P----------NLQFLEMPSCNIDGTRSKEQPSSELK---LKKCPRPESLPSGQCMFKSL 285
           P          N+Q+L +    I+   S     S+L+   +  C +  +LP        L
Sbjct: 547 PNVTSFPEVGTNIQWLNLNRTAIEAVPSTVGEKSKLRYLNMSGCDKLVNLPPTLRKLAQL 606

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
             L +  C N    P EL   + +  L + GT+I +
Sbjct: 607 KYLYLRGCTNVTASP-ELAGTKTMKALDLHGTSITD 641



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 147/309 (47%), Gaps = 43/309 (13%)

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK-NCSELEYISSSIFKLKSV 356
           R+ D L  L  L  L  D   ++ LP    Q  + S +EL  + S +E   +    L ++
Sbjct: 343 RMIDGLDYLPTLRYLRWDAYNLKSLP---SQFCMTSLVELNLSHSSIETAWNGTQDLANL 399

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP-SSLCMFKSLTSL 415
            S+ +++C +L  FP++       + +E      LKL  C+ L  +P SSL     L  L
Sbjct: 400 RSLNLTSCKHLTEFPDLS----KATNLE-----TLKLYNCNNLVEIPESSLTQLNKLVHL 450

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEG---------------------TGIREVPKSLA 454
           ++ DCKKL  LP+ + NL++L  L ++G                     T I+ VP S+ 
Sbjct: 451 KLSDCKKLRNLPNNI-NLKSLRFLHLDGCSCLEEFPFISETIEKLLLNETTIQYVPPSIE 509

Query: 455 QLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
           +L+ L +L+L  C    +LP  +    SL  L + +C N    P+   N+++   L +  
Sbjct: 510 RLSRLKELRLSGCKRLMNLPHNIKNLTSLIDLGLANCPNVTSFPEVGTNIQW---LNLNR 566

Query: 514 TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDP 571
           TAI  VP ++G+ S L +L +S  + L  +P +L +L+ L  L L    N+   PE L  
Sbjct: 567 TAIEAVPSTVGEKSKLRYLNMSGCDKLVNLPPTLRKLAQLKYLYLRGCTNVTASPE-LAG 625

Query: 572 LSSLKYLDL 580
             ++K LDL
Sbjct: 626 TKTMKALDL 634



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 24/291 (8%)

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           NLK+LP          L L    IE   +  + L+N+  L + SCK L      + K   
Sbjct: 363 NLKSLPSQFCMTSLVELNLSHSSIETAWNGTQDLANLRSLNLTSCKHLTEFPD-LSKATN 421

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           LE+++++ C NL  +E+P  ++    ++      LKL  C +  +LP+     KSL  L 
Sbjct: 422 LETLKLYNCNNL--VEIPESSL----TQLNKLVHLKLSDCKKLRNLPNN-INLKSLRFLH 474

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +  C   E  P      + + +L+++ T I+ +P  + +L+ L +L L  C  L  +  +
Sbjct: 475 LDGCSCLEEFP---FISETIEKLLLNETTIQYVPPSIERLSRLKELRLSGCKRLMNLPHN 531

Query: 350 IFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV--------LKLNKCS 397
           I  L S+  + ++NC N+  FPE    I + N++ + IE +PS+V        L ++ C 
Sbjct: 532 IKNLTSLIDLGLANCPNVTSFPEVGTNIQWLNLNRTAIEAVPSTVGEKSKLRYLNMSGCD 591

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
           KL +LP +L     L  L +  C  +   P EL   + ++ L + GT I +
Sbjct: 592 KLVNLPPTLRKLAQLKYLYLRGCTNVTASP-ELAGTKTMKALDLHGTSITD 641


>gi|77696207|gb|ABB00838.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKTLN-IL 62
           E+ I+  +F +M  LR LK   S++     VH  E   F   LR   W  +P K+L    
Sbjct: 37  EVIISGKSFKRMPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTF 96

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + LV L MP S++ +LW+  Q L  LK+++L  S+ L +LPDLS A NLE LDL YC 
Sbjct: 97  QPQYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSHATNLERLDLSYCE 156

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SS  +L+KLE L+++ C +L  +P  ++   L+ +  RGCS L+N+P M++   
Sbjct: 157 SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNTRGCSRLRNIPVMSTN-- 214

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            + L +    +EE+P SI+  S +  L + S  +L+ I+     L+ L+ I
Sbjct: 215 ITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLI 265



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 36/283 (12%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSL 288
           R PNL+FL++     DG      P           L  +  P     P+ Q  +  L  L
Sbjct: 47  RMPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTFQPQY--LVEL 104

Query: 289 EIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
             +     E+L +    L  L ++ +     ++ELP+ L     L +L+L  C  L  I 
Sbjct: 105 -YMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSHATNLERLDLSYCESLVEIP 162

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           SS   L  +E +E++NC NL+  P     +++ + +E + +       CS+L ++P    
Sbjct: 163 SSFSHLHKLEWLEMNNCINLQVIP----AHMNLASLETVNT-----RGCSRLRNIP---V 210

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKL 463
           M  ++T L  +    +E +P  +     LE L V  +    GI  +P SL QL L     
Sbjct: 211 MSTNITQL-YVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLID--- 266

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
              S  E++P  +     L  L +  C+    LP+   +L +L
Sbjct: 267 ---SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFL 306



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 54/285 (18%)

Query: 422 KLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           +LE+L +    L  L+++ +  +  ++E+P       L +L L  C S   +PS      
Sbjct: 110 QLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSHATNLERLDLSYCESLVEIPSSFSHLH 169

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG---------------------TAIREV 519
            L  LE+ +C N   +P  + NL  L+ +  +G                     TA+ E+
Sbjct: 170 KLEWLEMNNCINLQVIPAHM-NLASLETVNTRGCSRLRNIPVMSTNITQLYVSRTAVEEM 228

Query: 520 PESLGQLSSLEWLVLSDN----NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           P S+   S LE L +S +     +  +P SL QL       L ++++E IPE +  L  L
Sbjct: 229 PPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLD------LIDSDIETIPECIKSLHLL 282

Query: 576 KYLDLFE----NNLDRIPEYLRSFPT----SIPSEFTSL---RLSVDLRNCLKLDPNELS 624
             L+L       +L  +P  LR        S+ + F  L   +  ++  NC KL      
Sbjct: 283 YILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAELNFTNCFKLGQQAQR 342

Query: 625 EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
            I++           + +  +   PG E+P  F HQ  G+T++++
Sbjct: 343 AIVQ----------RSLLLGTTLLPGREVPAEFDHQGKGNTLTIR 377


>gi|13517468|gb|AAK28805.1|AF310960_1 resistance-like protein P2-A [Linum usitatissimum]
          Length = 1196

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 217/470 (46%), Gaps = 65/470 (13%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV------PF-------TELRYFEWHQ 53
            E+ +    F  M  L  LKF   + K   + L+ V      P+         LR+ +W  
Sbjct: 579  EMCLKANAFEGMNSLTFLKFESPEIKYPHYPLKNVKTKIHLPYYGLNSLPEGLRWLQWDG 638

Query: 54   FPLKTLNILHW-ENLVSLKMPGSKVTQLWD--DVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +P K+L    + ++LV L + GS + + W+  D   LV+L  +DL+Y   L  +PD+S +
Sbjct: 639  YPSKSLPAKFYPQHLVHLIIRGSPIRRCWEGYDQPQLVNLIVLDLRYCANLIAIPDISSS 698

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
             NLE L L  C SL E    +QYL KL  LD++ CK+L  LP  + SK LK +       
Sbjct: 699  LNLEELLLCRCVSLVEVPFHVQYLTKLVTLDINYCKNLKRLPPKLDSKLLKHV------R 752

Query: 171  LKNL-----PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK---------- 215
            +KNL     P++ S  L     L G  + ELPS+I  +   G L ++             
Sbjct: 753  MKNLEVTCCPEIDSRELEE-FDLSGTSLGELPSAIYNVKQNGVLRLHGKNITKFPGITTI 811

Query: 216  ----RLENISSSIFKLQFLESIRIHRCPNLQFL-EMPSCNIDGTRSKE--------QPSS 262
                +L    +SI ++   +  + H+  +   L +  + ++ G R  E          S 
Sbjct: 812  LKRFKLSLSGTSIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSIWNMISE 871

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
            EL +   P  ESLP       +LTSL +  C +   +P  + NL++L  L +  T I+ L
Sbjct: 872  ELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSL 931

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            P  + +L  L  ++L++C  LE I +SI KL  + ++ +S C  +   PE+P        
Sbjct: 932  PSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELP-------- 983

Query: 383  IERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER-LPDEL 430
                P+   L ++ C  L++LPS+ C    L ++    C +L++ +P E 
Sbjct: 984  ----PNLKTLNVSGCKSLQALPSNTCKLLYLNTIHFDGCPQLDQAIPGEF 1029



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 192/447 (42%), Gaps = 55/447 (12%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q    +L  L++  C N   +PD   +L     L+    ++ E+P  +  L  L  L++ 
Sbjct: 672  QPQLVNLIVLDLRYCANLIAIPDISSSLNLEELLLCRCVSLVEVPFHVQYLTKLVTLDIN 731

Query: 339  NCSELEYI----SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
             C  L+ +     S + K   ++++E++ C  +    E+   ++ G+ +  +PS++  + 
Sbjct: 732  YCKNLKRLPPKLDSKLLKHVRMKNLEVTCCPEIDS-RELEEFDLSGTSLGELPSAIYNVK 790

Query: 395  K----------CSKLESLPSSLCMFK------SLTSLEIIDCKKLERLPDELGNLEALEE 438
            +           +K   + + L  FK      S+  +++ D  +  +  D L  L     
Sbjct: 791  QNGVLRLHGKNITKFPGITTILKRFKLSLSGTSIREIDLADYHQQHQTSDGL-LLPKFHN 849

Query: 439  LRVEGTGIREV-PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            L + G    EV P S+  +   +L +      ESLP       +LTSL +  C++   +P
Sbjct: 850  LSLTGNRQLEVLPNSIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIP 909

Query: 498  DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK 556
              I NL  L  L +  T I+ +P S+ +L  L  + L D  +L+ IP S+++LS LV+L 
Sbjct: 910  TSISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLS 969

Query: 557  LSN----NNLERIPERLDPL--SSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
            +S      +L  +P  L  L  S  K L    +N  ++  YL                ++
Sbjct: 970  MSGCEIIISLPELPPNLKTLNVSGCKSLQALPSNTCKLL-YLN---------------TI 1013

Query: 611  DLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG----STI 666
                C +LD     E + +  +  S++      + +   G+E+PKWF ++S      ST+
Sbjct: 1014 HFDGCPQLDQAIPGEFVANFLVHASLSPS--YERQVRCSGSELPKWFSYRSMEDEDCSTV 1071

Query: 667  SLKTP---QPTGYNKLMGFAFCVVVAC 690
             ++ P       +  + G AF  V +C
Sbjct: 1072 KVELPLANDSPDHPMIKGIAFGCVYSC 1098


>gi|77696203|gb|ABB00836.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKTLN-IL 62
           E+ I+  +F +M  LR LK   S++     VH  E   F   LR   W  +P K+L    
Sbjct: 37  EVVISGKSFKRMPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTF 96

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + LV L MP S++ +LW+  Q L  LK+++L  S+ L +LPDLS A NLE LDL YC 
Sbjct: 97  QPQYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSHATNLERLDLSYCE 156

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SS  +L+KLE L+++ C +L  +P  ++   L+ +  RGCS L+N+P M++   
Sbjct: 157 SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNTRGCSRLRNIPVMSTN-- 214

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            + L +    +EE+P SI+  S +  L + S  +L+ I+     L+ L+ I
Sbjct: 215 ITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLI 265



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 30/235 (12%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSL 288
           R PNL+FL++     DG      P           L  +  P     P+ Q  +  L  L
Sbjct: 47  RMPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTFQPQY--LVEL 104

Query: 289 EIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
             +     E+L +    L  L ++ +     ++ELP+ L     L +L+L  C  L  I 
Sbjct: 105 -YMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSHATNLERLDLSYCESLVEIP 162

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           SS   L  +E +E++NC NL+  P     +++ + +E + +       CS+L ++P    
Sbjct: 163 SSFSHLHKLEWLEMNNCINLQVIP----AHMNLASLETVNT-----RGCSRLRNIP---V 210

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT----GIREVPKSLAQLAL 458
           M  ++T L  +    +E +P  +     LE L V  +    GI  +P SL QL L
Sbjct: 211 MSTNITQL-YVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDL 264



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 158/386 (40%), Gaps = 77/386 (19%)

Query: 340 CSELEY------ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI-----DGSGIERIPS 388
           C  LEY      +S   F +  ++ + IS  S  K  P + F  +     DG+    IP 
Sbjct: 13  CDVLEYATGTRAMSGISFDISGIDEVVISGKS-FKRMPNLRFLKVFKSRDDGNDRVHIPE 71

Query: 389 SV-----LKL--NKCSKLESLPSSLCMFKSLTSLEI-IDCKKLERLPDELGNLEALEELR 440
                  L+L   +    +SLP +   F+    +E+ +   +LE+L +    L  L+++ 
Sbjct: 72  ETEFPRRLRLLHWEAYPCKSLPPT---FQPQYLVELYMPSSQLEKLWEGTQRLTHLKKMN 128

Query: 441 VEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           +  +  ++E+P       L +L L  C S   +PS       L  LE+ +C N   +P  
Sbjct: 129 LFASRHLKELPDLSHATNLERLDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAH 188

Query: 500 IGNLEYLKVLTIKG---------------------TAIREVPESLGQLSSLEWLVLSDN- 537
           + NL  L+ +  +G                     TA+ E+P S+   S LE L +S + 
Sbjct: 189 M-NLASLETVNTRGCSRLRNIPVMSTNITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSG 247

Query: 538 ---NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRIPE 590
               +  +P SL QL       L +++ E IPE +  L  L  L+L       +L  +P 
Sbjct: 248 KLKGITHLPISLKQLD------LIDSDNETIPECIKSLHLLYILNLSGCWRLASLSELPS 301

Query: 591 YLRSFPT----SIPSEFTSL---RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYIT 643
            LR        S+ + F  L   +  ++  NC KL       I++           + + 
Sbjct: 302 SLRFLMADDCESLETVFCPLNTPKAELNFTNCFKLGKQAQRAIVQ----------RSLLL 351

Query: 644 KSMYFPGNEIPKWFRHQSTGSTISLK 669
            +   PG E+P  F H+  G+T++++
Sbjct: 352 GTTLLPGREVPAEFDHRGNGNTLTIR 377


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 186/392 (47%), Gaps = 33/392 (8%)

Query: 10  INPY-------TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNIL 62
           + PY        FSK+++LRLLK C  K   +   L   P + LR  +W   PL+TL + 
Sbjct: 550 VQPYEASWKIEAFSKISQLRLLKLCEIK---LPLGLNRFP-SSLRVLDWSGCPLRTLPLT 605

Query: 63  -HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            H   +V++K+  SK+ QLW   Q L +LK I+L +SK L + PD     NLE L L  C
Sbjct: 606 NHLVEIVAIKLYRSKIEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGC 665

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SC 180
           +SLTE H S+    KL +L+L  CK L +LP  I    LK L L GC   K+LP+   + 
Sbjct: 666 TSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCKIEMSSLKGLSLSGCCEFKHLPEFDETM 725

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
              S L L    I++LPSS+  L ++  L + +CK L  + +++ +L+ L  + +  C  
Sbjct: 726 ENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSK 785

Query: 241 LQFL-----EMPSCN---IDGTRSKEQPSSELKLKK--------CPRPESLPSGQCMFKS 284
           L        EM S      + T  +E PSS   L+         C  P +      +   
Sbjct: 786 LHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLPF 845

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSE 342
              L     PN  RLP +L  L +L  L +    + E  +P+    L+ L  L L   + 
Sbjct: 846 TQFLGTPQEPNGFRLPPKLC-LPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSG-NN 903

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
                SSI KL  +E + ++ C  L+ FPE P
Sbjct: 904 FVRPPSSISKLPKLEYLRLNCCEMLQKFPEFP 935



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 202/466 (43%), Gaps = 76/466 (16%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
            E L  G    ++L S+ +    + +R PD +G +  L  L+++G T++ E+   L     
Sbjct: 622  EQLWHGTQFLENLKSINLSFSKSLKRSPDFVG-VPNLEFLVLEGCTSLTEIHPSLLSHKK 680

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIE 384
            L+ L LK+C  L+ +   I ++ S++ + +S C   K  PE       +   +++ + I+
Sbjct: 681  LALLNLKDCKRLKTLPCKI-EMSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIK 739

Query: 385  RIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
            ++PSS+        L L  C  L  LP+++   KSL  L +  C KL   P+ L  +++L
Sbjct: 740  KLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSL 799

Query: 437  EELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            EEL    T I E+P S+  L  L  +    C           V+KS+ +  ++    F+ 
Sbjct: 800  EELFANETSIEELPSSVFFLENLKVISFAGCKG--------PVTKSVNTF-LLPFTQFLG 850

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL--QIIPESLNQLSSLV 553
             P E                   +P  L  L SL  L LS  NL  + +P+  + LSSLV
Sbjct: 851  TPQEPNGFR--------------LPPKLC-LPSLRNLNLSYCNLSEESMPKDFSNLSSLV 895

Query: 554  SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR 613
             L LS NN  R P  +  L  L+YL L         E L+ FP   PS   S+RL +D  
Sbjct: 896  VLNLSGNNFVRPPSSISKLPKLEYLRL------NCCEMLQKFP-EFPS---SMRL-LDAS 944

Query: 614  NCLKLDPNEL----------SEIIKDG--------WMKQSVNGETYITKSMYFPGNEIPK 655
            NC  L+ ++           S+I +          +++   +G       M   G+EIP 
Sbjct: 945  NCASLETSKFNLSRPCSLFASQIQRHSHLPRLLKSYVEAQEHGLPKARFDMLITGSEIPS 1004

Query: 656  WFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVS--ECCRHE 699
            WF      S  ++  P      + MGFA C ++       E C HE
Sbjct: 1005 WFTPSKYVSVTNMSVPHNCPPTEWMGFALCFMLVSFAEPPELCHHE 1050



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 110/197 (55%), Gaps = 6/197 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV-PKSLA 454
           SK+E L       ++L S+ +   K L+R PD +G +  LE L +EG T + E+ P  L+
Sbjct: 619 SKIEQLWHGTQFLENLKSINLSFSKSLKRSPDFVG-VPNLEFLVLEGCTSLTEIHPSLLS 677

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
              L+ L LK C   ++LP ++ +S SL  L +  C  F  LP+    +E L  L+++ T
Sbjct: 678 HKKLALLNLKDCKRLKTLPCKIEMS-SLKGLSLSGCCEFKHLPEFDETMENLSKLSLEET 736

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPL 572
           AI+++P SLG L SL  L L +  NL  +P ++++L SL+ L +S  + L   PE L  +
Sbjct: 737 AIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEM 796

Query: 573 SSLKYLDLFENNLDRIP 589
            SL+ L   E +++ +P
Sbjct: 797 KSLEELFANETSIEELP 813


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 138/261 (52%), Gaps = 19/261 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCG------SKNKCMV------HSLEGVPFTELRY 48
           MSK   +I++N  TFS+M  LRLLKF        S++   +      + LEG+    L  
Sbjct: 532 MSK-TGKIRLNHATFSRMPMLRLLKFYRTWSSPRSQDAVFIVKSAESNCLEGLS-NRLSL 589

Query: 49  FEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
             W ++P K+L +    ENLV L MP S + QLW+D +    L+R+DL  S  L +LPDL
Sbjct: 590 LHWEEYPCKSLCSNFFMENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLPDL 649

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
           S   NL  ++L  C SL E  SS+Q   KL  L+LD CK L SLP+ I  + L  L L  
Sbjct: 650 SSTTNLTSIELWGCESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQLESLSILSLAC 709

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
           C NLK LP +        L L   G+EE PSS+  L N+    +  CK L ++  S+ + 
Sbjct: 710 CPNLKMLPDIPRG--VKDLSLHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSL-PSLLQW 766

Query: 228 QFLESIRIHRCPNLQFL-EMP 247
           + L  I +  C NL+ L E+P
Sbjct: 767 KSLRDIDLSGCSNLKVLPEIP 787



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 64/381 (16%)

Query: 442 EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
           +   ++ +P   +   L+ ++L  C S   +PS +   K L SL + +CK    LP  I 
Sbjct: 639 KSVNLKRLPDLSSTTNLTSIELWGCESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLI- 697

Query: 502 NLEYLKVLTIKG----TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
            LE L +L++        + ++P  +  LS      L D+ L+  P S+  L +L    +
Sbjct: 698 QLESLSILSLACCPNLKMLPDIPRGVKDLS------LHDSGLEEWPSSVPSLDNLTFFSV 751

Query: 558 SN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLS------ 609
           +   NL  +P  L    SL+ +DL   +NL  +PE        +P +   L+ S      
Sbjct: 752 AFCKNLRSLPSLLQ-WKSLRDIDLSGCSNLKVLPEI-----PDLPWQVGILQGSRKDYCR 805

Query: 610 VDLRNCLKLDPNELSEIIK--DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
               NC+ L       I+      +K+  + +T    ++   G++ P+WF +QS G +I+
Sbjct: 806 FHFLNCVNLGWYARLNIMACAQQRIKEIASAKTRNYFAVALAGSKTPEWFSYQSLGCSIT 865

Query: 668 LKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD----- 722
           +  P  +     +GFAFC V+           S         F + C+ R E  +     
Sbjct: 866 ISLPTCSFNTMFLGFAFCAVLEFEFPLVISRNS--------HFYIACESRFENTNDDIRD 917

Query: 723 --SYTSSYLGKISHVESDHVFLGSSIFAG-------ENSC---KRSDEFFFH-------- 762
             S+++S L  I   ESDHVFL     +        +N C   K S EF           
Sbjct: 918 DLSFSASSLETIP--ESDHVFLWYRFNSSDLNSWLIQNCCILRKASFEFKAQYRFLSNHH 975

Query: 763 --IDRSCCEVKKCGIHFVHAQ 781
              ++   +VK+CG+H ++ +
Sbjct: 976 PSTEKWEVKVKRCGVHLIYNE 996



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 16/157 (10%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSEL 343
           L  L++    N +RLPD L +   L  + + G  ++ E+P  + +   L  L L NC EL
Sbjct: 632 LRRLDLSKSVNLKRLPD-LSSTTNLTSIELWGCESLLEIPSSVQKCKKLYSLNLDNCKEL 690

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLKLNK---- 395
             + S I +L+S+  + ++ C NLK  P+IP      ++  SG+E  PSSV  L+     
Sbjct: 691 RSLPSLI-QLESLSILSLACCPNLKMLPDIPRGVKDLSLHDSGLEEWPSSVPSLDNLTFF 749

Query: 396 ----CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
               C  L SLPS L  +KSL  +++  C  L+ LP+
Sbjct: 750 SVAFCKNLRSLPS-LLQWKSLRDIDLSGCSNLKVLPE 785



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 16/160 (10%)

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
           KRL ++SS+      L SI +  C +L  LE+PS     +  K +    L L  C    S
Sbjct: 644 KRLPDLSSTTN----LTSIELWGCESL--LEIPS-----SVQKCKKLYSLNLDNCKELRS 692

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           LPS     +SL+ L +  CPN + LPD    ++ L+   +  + + E P  +  L  L+ 
Sbjct: 693 LPS-LIQLESLSILSLACCPNLKMLPDIPRGVKDLS---LHDSGLEEWPSSVPSLDNLTF 748

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             +  C  L  + S + + KS+  I++S CSNLK  PEIP
Sbjct: 749 FSVAFCKNLRSLPS-LLQWKSLRDIDLSGCSNLKVLPEIP 787



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 42/222 (18%)

Query: 295 NFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           N E+L ++      L RL +  +  ++ LP+ L     L+ +EL  C  L  I SS+ K 
Sbjct: 618 NIEQLWNDNEGPPKLRRLDLSKSVNLKRLPD-LSSTTNLTSIELWGCESLLEIPSSVQKC 676

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
           K + S+ + NC  L+  P                                 SL   +SL+
Sbjct: 677 KKLYSLNLDNCKELRSLP---------------------------------SLIQLESLS 703

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESL 472
            L +  C  L+ LPD       +++L +  +G+ E P S+  L  L+   +  C +  SL
Sbjct: 704 ILSLACCPNLKMLPDI---PRGVKDLSLHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSL 760

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           PS L   KSL  +++  C N   LP EI +L + +V  ++G+
Sbjct: 761 PS-LLQWKSLRDIDLSGCSNLKVLP-EIPDLPW-QVGILQGS 799


>gi|20270890|gb|AAM18462.1|AF440696_1 disease resistance protein RPP4 [Arabidopsis thaliana]
          Length = 1135

 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 191/418 (45%), Gaps = 68/418 (16%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            +L+   W   P+K L +    E LV L+M  S + +LWD  Q L SLK + L  SK L +
Sbjct: 711  KLKRLWWDYCPVKRLPSNFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKE 770

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            +PDLSLA NLE L L  C SL    SSIQ   KL  LD+  CK L S PT ++ + L+ L
Sbjct: 771  IPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDLNLESLEYL 830

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L GC NL+N P                 I+   S  + L +  E+ +  C   +N+ + 
Sbjct: 831  NLTGCPNLRNFP----------------AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAG 874

Query: 224  IFKLQFLESIRIHRC----PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
            +  L  L  +R   C      L FL++  C                     + E L  G 
Sbjct: 875  LDYLDCL--MRCMPCEFRPEYLTFLDVSGC---------------------KHEKLWEGI 911

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
                SL  +++ +  N   +PD L     L RL ++G  ++  LP  +G L  L +LE+K
Sbjct: 912  QSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMK 970

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPS------ 388
             C+ LE + + +  L S+  +++S CS+L+ FP     I    ++ + IE +P       
Sbjct: 971  ECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLT 1029

Query: 389  --SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
              SVL +  C +L+++  ++    SL   +  DC+         G ++AL +  V  T
Sbjct: 1030 RLSVLLMYCCQRLKNISPNIFRLTSLMVADFTDCR---------GVIKALSDATVVAT 1078



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 236/524 (45%), Gaps = 89/524 (16%)

Query: 51   WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
            W+  PLK+L +    E LV+L M  SK+ +LW+    L SLK++DL  S  L ++PDLSL
Sbjct: 580  WNYCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSL 639

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
            A NLE                         L+L +C+SL +LP+SI +            
Sbjct: 640  AINLE------------------------ELNLSKCESLVTLPSSIQN------------ 663

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
                     +  LR TL   GV + +L  S++ + N+ E L      +E     I+  + 
Sbjct: 664  ---------AIKLR-TLYCSGVLLIDL-KSLEGMCNL-EYLSVDWSSMEGTQGLIYLPRK 711

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
            L+ +    CP      +PS        K +   EL+++     E L  G     SL  + 
Sbjct: 712  LKRLWWDYCP---VKRLPS------NFKAEYLVELRMENSDL-EKLWDGTQPLGSLKEMY 761

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +      + +PD L     L RL + G  ++  LP  +     L  L++++C +LE   +
Sbjct: 762  LHGSKYLKEIPD-LSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPT 820

Query: 349  SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSL- 406
             +  L+S+E + ++ C NL+ FP I    +  S  E +   + +++  C   ++LP+ L 
Sbjct: 821  DL-NLESLEYLNLTGCPNLRNFPAI---KMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 876

Query: 407  ----------CMFKS--LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSL 453
                      C F+   LT L++  CK  E+L + + +L +L+ + + E   + E+P   
Sbjct: 877  YLDCLMRCMPCEFRPEYLTFLDVSGCKH-EKLWEGIQSLGSLKRMDLSESENLTEIPDLS 935

Query: 454  AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                L +L L  C S  +LPS +     L  LE+ +C     LP ++ NL  L +L + G
Sbjct: 936  KATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSG 994

Query: 514  -TAIREVPESLGQLSSLEWLVLSDNNLQIIP---ESLNQLSSLV 553
             +++R  P      + +E L L +  ++ +P   E L +LS L+
Sbjct: 995  CSSLRTFPLI---STRIECLYLENTAIEEVPCCIEDLTRLSVLL 1035



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 45/310 (14%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSI---FKLKSV--ESIEISNCSNLKGFPEI 373
           ++E+P+ L     L +L L  C  L  + SSI    KL+++    + + +  +L+G   +
Sbjct: 631 LKEIPD-LSLAINLEELNLSKCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNL 689

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEI-IDCKKLER 425
            + ++D S +E     +    K  +L       + LPS+   FK+   +E+ ++   LE+
Sbjct: 690 EYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSN---FKAEYLVELRMENSDLEK 746

Query: 426 LPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           L D    L +L+E+ + G+  ++E+P     + L +L L  C S  +LPS +  +  L +
Sbjct: 747 LWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLIN 806

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNN-LQI- 541
           L++ DCK     P ++ NLE L+ L + G   +R  P      S  E  +L D N +++ 
Sbjct: 807 LDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSYFE--ILQDRNEIEVE 863

Query: 542 -------IPESLNQLSSLVS-------------LKLSNNNLERIPERLDPLSSLKYLDLF 581
                  +P  L+ L  L+              L +S    E++ E +  L SLK +DL 
Sbjct: 864 DCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLS 923

Query: 582 EN-NLDRIPE 590
           E+ NL  IP+
Sbjct: 924 ESENLTEIPD 933


>gi|21539521|gb|AAM53313.1| disease resistance RPP5-like protein [Arabidopsis thaliana]
          Length = 1147

 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 191/418 (45%), Gaps = 68/418 (16%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            +L+   W   P+K L +    E LV L+M  S + +LWD  Q L SLK + L  SK L +
Sbjct: 723  KLKRLWWDYCPVKRLPSNFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKE 782

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            +PDLSLA NLE L L  C SL    SSIQ   KL  LD+  CK L S PT ++ + L+ L
Sbjct: 783  IPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDLNLESLEYL 842

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L GC NL+N P                 I+   S  + L +  E+ +  C   +N+ + 
Sbjct: 843  NLTGCPNLRNFP----------------AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAG 886

Query: 224  IFKLQFLESIRIHRC----PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
            +  L  L  +R   C      L FL++  C                     + E L  G 
Sbjct: 887  LDYLDCL--MRCMPCEFRPEYLTFLDVSGC---------------------KHEKLWEGI 923

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
                SL  +++ +  N   +PD L     L RL ++G  ++  LP  +G L  L +LE+K
Sbjct: 924  QSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMK 982

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPS------ 388
             C+ LE + + +  L S+  +++S CS+L+ FP     I    ++ + IE +P       
Sbjct: 983  ECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLT 1041

Query: 389  --SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
              SVL +  C +L+++  ++    SL   +  DC+         G ++AL +  V  T
Sbjct: 1042 RLSVLLMYCCQRLKNISPNIFRLTSLMVADFTDCR---------GVIKALSDATVVAT 1090



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 237/528 (44%), Gaps = 97/528 (18%)

Query: 51   WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
            W+  PLK+L +    E LV+L M  SK+ +LW+    L SLK++DL  S  L ++PDLSL
Sbjct: 592  WNYCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSL 651

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGC 168
            A NLE                         L+L +C+SL +LP+SI +   L+ L   G 
Sbjct: 652  AINLE------------------------ELNLSKCESLVTLPSSIQNAIKLRTLYCSGV 687

Query: 169  --SNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC--KRLENISSSI 224
               +LK+L  M  C+L   L +    +E+    I     +  L    C  KRL     S 
Sbjct: 688  LLIDLKSLEGM--CNLE-YLSVDWSSMEDTQGLIYLPRKLKRLWWDYCPVKRL----PSN 740

Query: 225  FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
            FK ++L  +R+    +L+ L       DGT    QP   LK       E    G    K 
Sbjct: 741  FKAEYLVELRMEN-SDLEKL------WDGT----QPLGSLK-------EMYLHGSKYLKE 782

Query: 285  LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
            +  L +    N ERL             +    ++  LP  +     L  L++++C +LE
Sbjct: 783  IPDLSL--AINLERL------------YLFGCESLVTLPSSIQNATKLINLDMRDCKKLE 828

Query: 345  YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLP 403
               + +  L+S+E + ++ C NL+ FP I    +  S  E +   + +++  C   ++LP
Sbjct: 829  SFPTDL-NLESLEYLNLTGCPNLRNFPAI---KMGCSYFEILQDRNEIEVEDCFWNKNLP 884

Query: 404  SSL-----------CMFKS--LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREV 449
            + L           C F+   LT L++  CK  E+L + + +L +L+ + + E   + E+
Sbjct: 885  AGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKH-EKLWEGIQSLGSLKRMDLSESENLTEI 943

Query: 450  PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            P       L +L L  C S  +LPS +     L  LE+ +C     LP ++ NL  L +L
Sbjct: 944  PDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIIL 1002

Query: 510  TIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIP---ESLNQLSSLV 553
             + G +++R  P      + +E L L +  ++ +P   E L +LS L+
Sbjct: 1003 DLSGCSSLRTFPLI---STRIECLYLENTAIEEVPCCIEDLTRLSVLL 1047



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 45/310 (14%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSI---FKLKSV--ESIEISNCSNLKGFPEI 373
           ++E+P+ L     L +L L  C  L  + SSI    KL+++    + + +  +L+G   +
Sbjct: 643 LKEIPD-LSLAINLEELNLSKCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNL 701

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEI-IDCKKLER 425
            + ++D S +E     +    K  +L       + LPS+   FK+   +E+ ++   LE+
Sbjct: 702 EYLSVDWSSMEDTQGLIYLPRKLKRLWWDYCPVKRLPSN---FKAEYLVELRMENSDLEK 758

Query: 426 LPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           L D    L +L+E+ + G+  ++E+P     + L +L L  C S  +LPS +  +  L +
Sbjct: 759 LWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLIN 818

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNN-LQI- 541
           L++ DCK     P ++ NLE L+ L + G   +R  P      S  E  +L D N +++ 
Sbjct: 819 LDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSYFE--ILQDRNEIEVE 875

Query: 542 -------IPESLNQLSSLVS-------------LKLSNNNLERIPERLDPLSSLKYLDLF 581
                  +P  L+ L  L+              L +S    E++ E +  L SLK +DL 
Sbjct: 876 DCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLS 935

Query: 582 EN-NLDRIPE 590
           E+ NL  IP+
Sbjct: 936 ESENLTEIPD 945


>gi|42566891|ref|NP_193420.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658418|gb|AEE83818.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 191/418 (45%), Gaps = 68/418 (16%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            +L+   W   P+K L +    E LV L+M  S + +LWD  Q L SLK + L  SK L +
Sbjct: 723  KLKRLWWDYCPVKRLPSNFKAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKE 782

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            +PDLSLA NLE L L  C SL    SSIQ   KL  LD+  CK L S PT ++ + L+ L
Sbjct: 783  IPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDLNLESLEYL 842

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L GC NL+N P                 I+   S  + L +  E+ +  C   +N+ + 
Sbjct: 843  NLTGCPNLRNFP----------------AIKMGCSYFEILQDRNEIEVEDCFWNKNLPAG 886

Query: 224  IFKLQFLESIRIHRC----PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
            +  L  L  +R   C      L FL++  C                     + E L  G 
Sbjct: 887  LDYLDCL--MRCMPCEFRPEYLTFLDVSGC---------------------KHEKLWEGI 923

Query: 280  CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
                SL  +++ +  N   +PD L     L RL ++G  ++  LP  +G L  L +LE+K
Sbjct: 924  QSLGSLKRMDLSESENLTEIPD-LSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMK 982

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPS------ 388
             C+ LE + + +  L S+  +++S CS+L+ FP     I    ++ + IE +P       
Sbjct: 983  ECTGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLT 1041

Query: 389  --SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
              SVL +  C +L+++  ++    SL   +  DC+         G ++AL +  V  T
Sbjct: 1042 RLSVLLMYCCQRLKNISPNIFRLTSLMVADFTDCR---------GVIKALSDATVVAT 1090



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 236/524 (45%), Gaps = 89/524 (16%)

Query: 51   WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
            W+  PLK+L +    E LV+L M  SK+ +LW+    L SLK++DL  S  L ++PDLSL
Sbjct: 592  WNYCPLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIPDLSL 651

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
            A NLE                         L+L +C+SL +LP+SI +            
Sbjct: 652  AINLE------------------------ELNLSKCESLVTLPSSIQN------------ 675

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
                     +  LR TL   GV + +L  S++ + N+ E L      +E     I+  + 
Sbjct: 676  ---------AIKLR-TLYCSGVLLIDL-KSLEGMCNL-EYLSVDWSSMEGTQGLIYLPRK 723

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
            L+ +    CP      +PS        K +   EL+++     E L  G     SL  + 
Sbjct: 724  LKRLWWDYCP---VKRLPS------NFKAEYLVELRMENSDL-EKLWDGTQPLGSLKEMY 773

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +      + +PD L     L RL + G  ++  LP  +     L  L++++C +LE   +
Sbjct: 774  LHGSKYLKEIPD-LSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPT 832

Query: 349  SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSL- 406
             +  L+S+E + ++ C NL+ FP I    +  S  E +   + +++  C   ++LP+ L 
Sbjct: 833  DL-NLESLEYLNLTGCPNLRNFPAI---KMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 888

Query: 407  ----------CMFKS--LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSL 453
                      C F+   LT L++  CK  E+L + + +L +L+ + + E   + E+P   
Sbjct: 889  YLDCLMRCMPCEFRPEYLTFLDVSGCKH-EKLWEGIQSLGSLKRMDLSESENLTEIPDLS 947

Query: 454  AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                L +L L  C S  +LPS +     L  LE+ +C     LP ++ NL  L +L + G
Sbjct: 948  KATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDV-NLSSLIILDLSG 1006

Query: 514  -TAIREVPESLGQLSSLEWLVLSDNNLQIIP---ESLNQLSSLV 553
             +++R  P      + +E L L +  ++ +P   E L +LS L+
Sbjct: 1007 CSSLRTFPLI---STRIECLYLENTAIEEVPCCIEDLTRLSVLL 1047



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 45/310 (14%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSI---FKLKSV--ESIEISNCSNLKGFPEI 373
           ++E+P+ L     L +L L  C  L  + SSI    KL+++    + + +  +L+G   +
Sbjct: 643 LKEIPD-LSLAINLEELNLSKCESLVTLPSSIQNAIKLRTLYCSGVLLIDLKSLEGMCNL 701

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEI-IDCKKLER 425
            + ++D S +E     +    K  +L       + LPS+   FK+   +E+ ++   LE+
Sbjct: 702 EYLSVDWSSMEGTQGLIYLPRKLKRLWWDYCPVKRLPSN---FKAEYLVELRMENSDLEK 758

Query: 426 LPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           L D    L +L+E+ + G+  ++E+P     + L +L L  C S  +LPS +  +  L +
Sbjct: 759 LWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLIN 818

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNN-LQI- 541
           L++ DCK     P ++ NLE L+ L + G   +R  P      S  E  +L D N +++ 
Sbjct: 819 LDMRDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSYFE--ILQDRNEIEVE 875

Query: 542 -------IPESLNQLSSLVS-------------LKLSNNNLERIPERLDPLSSLKYLDLF 581
                  +P  L+ L  L+              L +S    E++ E +  L SLK +DL 
Sbjct: 876 DCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLS 935

Query: 582 EN-NLDRIPE 590
           E+ NL  IP+
Sbjct: 936 ESENLTEIPD 945


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 150/273 (54%), Gaps = 21/273 (7%)

Query: 8   IQINPYTFSKMTELRLLKF--------CGSKNKCMV-HSLEGVPFTELRYFEWHQFPLKT 58
           I+++P  F +M+ L+ LKF        C + +K      L+  P  EL Y  W  +P + 
Sbjct: 537 IKLSPDVFMRMSNLKFLKFHNSHCSQWCDNDHKIQFSKELDHFP-DELVYLHWQGYPYEY 595

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +  + E LV L +  S + QLW+D +   +L+ +DL  SK L  L  LS A+NLE LD
Sbjct: 596 LPSEFNPEELVDLSLRYSYIKQLWEDDKKTENLRWVDLSQSKDLRSLSGLSKAKNLERLD 655

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L  C+SL    SSI+ +NKL  L+L  C SL SLP  I+ K LK L+L GCSNL+   ++
Sbjct: 656 LEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEGINLKSLKTLILSGCSNLQEF-QI 714

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            S ++ S L L G  IE++   I+ L N+  L + +C+RL+ + + ++KL+ L+ + +  
Sbjct: 715 ISDNIES-LYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSG 773

Query: 238 CPNLQFL-----EMPSCNI---DGTRSKEQPSS 262
           C  L+ L     EM    I   DGT  K+ P +
Sbjct: 774 CSALESLPPIKEEMECLEILLMDGTSIKQTPET 806



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 65/385 (16%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           +E LP E  N + L  L +  + I++L E   +   L  ++L    +L  +S  + K K+
Sbjct: 593 YEYLPSEF-NPEELVDLSLRYSYIKQLWEDDKKTENLRWVDLSQSKDLRSLSG-LSKAKN 650

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTS 414
           +E +++  C++L          + GS IE++   + L L  C+ LESLP  + + KSL +
Sbjct: 651 LERLDLEGCTSLV---------LLGSSIEKMNKLIYLNLRDCTSLESLPEGINL-KSLKT 700

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
           L +  C  L+       N+E+L    +EG+ I +V + +  L  L  L LK C   + LP
Sbjct: 701 LILSGCSNLQEFQIISDNIESL---YLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLP 757

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           + LY  KSL  L +  C     LP     +E L++L + GT+I++ PE++          
Sbjct: 758 NDLYKLKSLQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQTPETIC--------- 808

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYL 592
                          LS+L       +++E         + L Y+D     +L+++ E  
Sbjct: 809 ---------------LSNLKMFSFCGSSIE-------DSTGLHYVDAHGCVSLEKVAE-- 844

Query: 593 RSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK-------- 644
              P ++P     +  +    NC KL+  E   I+    +K  +   T +          
Sbjct: 845 ---PVTLPLVTDRMHTTFIFTNCFKLNRAEQEAIVAQAQLKSQLLARTSLQHNNKGLVLE 901

Query: 645 ---SMYFPGNEIPKWFRHQSTGSTI 666
              ++ FPG+EIP WF HQ  GS I
Sbjct: 902 PLVAVCFPGSEIPSWFSHQRMGSLI 926



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 15/167 (8%)

Query: 235 IHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           + +  NL+ L++  C     +  +  K      L L+ C   ESLP G    KSL +L +
Sbjct: 645 LSKAKNLERLDLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEG-INLKSLKTLIL 703

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C N +       N+++L    ++G+AI ++ E +  L  L  L LKNC  L+Y+ + +
Sbjct: 704 SGCSNLQEFQIISDNIESL---YLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDL 760

Query: 351 FKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV 390
           +KLKS++ + +S CS L+  P I           +DG+ I++ P ++
Sbjct: 761 YKLKSLQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQTPETI 807


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 162/560 (28%), Positives = 259/560 (46%), Gaps = 79/560 (14%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L++LDL     LT   + I  L  L VL LD  + LTS+P  I     L  L L GC+ L
Sbjct: 30  LKVLDL-RNYHLTSVPAEIGQLTSLGVLHLDNNQ-LTSVPAEIGQLTSLTHLYL-GCNQL 86

Query: 172 KNLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
            ++P    ++TS    + L L    +  +P+ I  L+++ E L     +L ++ + I +L
Sbjct: 87  TSVPAWIGQLTSL---THLELWSNRLTSVPAEIGQLASL-EKLHLEGNQLTSVPAEIGQL 142

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
             L  + ++     Q   +P+  I    S     ++L L  C +  S+P+      SL  
Sbjct: 143 VALTELTLYGN---QLTSVPA-EIGQLTSL----TDLYLG-CNQLTSVPAWIGQLTSLKE 193

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L +        +P E+G L AL  L +    +  +P  +GQL  L  L L N ++L  + 
Sbjct: 194 LTLYGN-QLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRL-NGNQLTSVP 251

Query: 348 SSIFKLKSVESIEISNCSNLKGFP-EIPFCN------IDGSGIERIPSSVLKLNKCSKLE 400
           + I +L S+E++ + + + L   P EI          +D + +  +P  + +L    +LE
Sbjct: 252 AEIGQLASLENLLLGH-NQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLE 310

Query: 401 -------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
                  S+P+ +    SL  L +    +L  +P E+G L AL+EL + G  +  VP  +
Sbjct: 311 LEGNQLTSVPAEIWQLTSLKWLNL-GYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEV 369

Query: 454 AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK--------------------- 491
            +L AL KL L + +   SLP+ +    SL  L + D +                     
Sbjct: 370 GRLSALRKLSLSR-NRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLG 428

Query: 492 -NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                +P EIG L  L  L ++   +  VP  +GQL+SLEWL L++N L  +P  + QL+
Sbjct: 429 NQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLT 488

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSE---FTSLR 607
           SLV   L  N L  +P  +  L+SL +LDL +N L           TS+P+E    T+LR
Sbjct: 489 SLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQL-----------TSVPAEVGRLTALR 537

Query: 608 -LSVDLRNCLKLDPNELSEI 626
            L+V  RN L L P E+  +
Sbjct: 538 ELNVS-RNALTLLPAEIGRL 556



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 164/351 (46%), Gaps = 54/351 (15%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+G L AL  L +    +  +P  +GQL  L  L L N ++L  + + I +L S+  
Sbjct: 20  VPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDN-NQLTSVPAEIGQLTSLTH 78

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + +                                  C++L S+P+ +    SLT LE+ 
Sbjct: 79  LYLG---------------------------------CNQLTSVPAWIGQLTSLTHLELW 105

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY 477
              +L  +P E+G L +LE+L +EG  +  VP  + QL AL++L L   +   S+P+ + 
Sbjct: 106 -SNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYG-NQLTSVPAEIG 163

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
              SLT L  + C     +P  IG L  LK LT+ G  +  VP  +GQL++L+WL L DN
Sbjct: 164 QLTSLTDL-YLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDN 222

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP- 596
            L  +P  + QL +L  L+L+ N L  +P  +  L+SL+ L L  N L  +P  +     
Sbjct: 223 KLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTS 282

Query: 597 -----------TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
                      TS+P E   L   V     L+L+ N+L+ +  + W   S+
Sbjct: 283 LRKLYLDHNKLTSVPVEIGQLTSLVR----LELEGNQLTSVPAEIWQLTSL 329



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 161/591 (27%), Positives = 275/591 (46%), Gaps = 65/591 (10%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
           ++  L SL  + L  ++L +   ++    +L  L LG C+ LT   + I  L  L  L+L
Sbjct: 46  EIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLG-CNQLTSVPAWIGQLTSLTHLEL 104

Query: 143 DRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRST-LPLLGVGIEELPSSI 200
                LTS+P  I     L++L L G + L ++P      +  T L L G  +  +P+ I
Sbjct: 105 -WSNRLTSVPAEIGQLASLEKLHLEG-NQLTSVPAEIGQLVALTELTLYGNQLTSVPAEI 162

Query: 201 KCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQFLEMPS 248
             L+++ +L +  C +L ++ + I +L  L+ +             I +   LQ+L +  
Sbjct: 163 GQLTSLTDLYL-GCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKD 221

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPE--SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
             +    ++      LKL +    +  S+P+      SL +L ++       +P E+G L
Sbjct: 222 NKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENL-LLGHNQLTSVPAEIGQL 280

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI------- 359
            +L +L +D   +  +P  +GQL  L +LEL+  ++L  + + I++L S++ +       
Sbjct: 281 TSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEG-NQLTSVPAEIWQLTSLKWLNLGYNQL 339

Query: 360 -----EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLC 407
                EI   + LK       C + G+ +  +P+ V +L+   KL        SLP+ + 
Sbjct: 340 TSVPAEIGQLAALK-----ELC-LYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIG 393

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
              SL  L + D  +L  +P E+G L AL+ L + G  +  VP  + QLA L  L L+  
Sbjct: 394 QLTSLRELRLSD-NQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRD- 451

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
           +    +P+ +     LTSLE +         LP EIG L  L    + G  +  VP  +G
Sbjct: 452 NRLTGVPAEI---GQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIG 508

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENN 584
           QL+SL  L L DN L  +P  + +L++L  L +S N L  +P  +  L+SLK L L EN 
Sbjct: 509 QLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENE 568

Query: 585 LDRIPEYLRSFPTSIP------SEFTSLRLSVDL---RNCLKLDPNELSEI 626
           L  +P  +    TS+       ++ TSL   + L    + L+L  N+L+ +
Sbjct: 569 LTSVPAEIGQL-TSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSM 618



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 256/546 (46%), Gaps = 34/546 (6%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG-YCSSL 124
           +L  L++  +++T +  ++  L SL+++ L+ ++L T +P   + Q + + +L  Y + L
Sbjct: 98  SLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQL-TSVPA-EIGQLVALTELTLYGNQL 155

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHL 182
           T   + I  L  L  L L  C  LTS+P  I     LK L L G + L ++P ++     
Sbjct: 156 TSVPAEIGQLTSLTDLYLG-CNQLTSVPAWIGQLTSLKELTLYG-NQLTSVPAEIGQLAA 213

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHR 237
              L L    +  +P+ I  L  + +LL  +  +L ++ + I +L  LE++     ++  
Sbjct: 214 LQWLSLKDNKLTSVPAEIGQLRAL-KLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTS 272

Query: 238 CPN--LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE----SLPSGQCMFKSLTSLEII 291
            P    Q   +    +D  +    P    +L    R E     L S       LTSL+ +
Sbjct: 273 VPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWL 332

Query: 292 DCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +        +P E+G L AL  L + G  +  +P  +G+L+ L KL L   + L  + + 
Sbjct: 333 NLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSR-NRLTSLPAE 391

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
           I +L S+  + +S+ + L   P         + I ++ +  L +   ++L S+P+ +   
Sbjct: 392 IGQLTSLRELRLSD-NQLTSVP---------AEIGQLRALKLLILLGNQLTSVPAEIGQL 441

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
            SL  L + D  +L  +P E+G L +LE L +    +  +P  + QL      L   +  
Sbjct: 442 ASLVGLHLRD-NRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQL 500

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            S+P+ +    SLT L+++D +    +P E+G L  L+ L +   A+  +P  +G+L+SL
Sbjct: 501 TSVPAEIGQLTSLTHLDLVDNQ-LTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSL 559

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L L +N L  +P  + QL+SL  L L++N L  +P  +  L  L  L L  N L  +P
Sbjct: 560 KGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMP 619

Query: 590 EYLRSF 595
             +R  
Sbjct: 620 AAIRKL 625


>gi|297794743|ref|XP_002865256.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311091|gb|EFH41515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 236/542 (43%), Gaps = 121/542 (22%)

Query: 336  ELKNCSELEYISSSIFK----------LKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            E KN +EL ++  S  K           +++E +    C++L          I  S I +
Sbjct: 522  EEKNTAELRWLDISHSKDLLSLSGLLDARNIERLNAECCTSL----------IKCSSIRQ 571

Query: 386  IPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
            + S V L   +C+ L+SLP  + + KSL SL +  C KL   P    N+E+L    ++GT
Sbjct: 572  MDSLVYLNFRECTSLKSLPKGISL-KSLKSLILSGCSKLRTFPTISENIESL---YLDGT 627

Query: 445  GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I+ VP+S+  L  L+ L LKKC     LPS L   KSL  L +  C      P+   ++
Sbjct: 628  AIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSKLKCFPEIDEDM 687

Query: 504  EYLKVLTIKGTAIREVPESL--------------------------GQLSSLEWLVLSDN 537
            E+L++L +  TAI+++P  +                             S L  L L+D 
Sbjct: 688  EHLEILLMDDTAIKQIPIKMCMSNLKMFTFGGSKFQGSTGYELLPFSGCSHLSDLYLTDC 747

Query: 538  NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLR 593
            NL  +P + + LSS+ SL LS NNLE +PE +  L  LK LDL      N+L  +P  L+
Sbjct: 748  NLHKLPNNFSCLSSVHSLCLSRNNLEYLPESIKILHHLKSLDLKHCRKLNSLPVLPSNLQ 807

Query: 594  SFPT-------SIPSEFTSLRLSVDLR------NCLKLDPNELSEIIKDGWMKQSVNGET 640
                       ++ +  T L L+  ++      +C KL+      I+    +K  +    
Sbjct: 808  YLDAHDCASLETVANPMTHLVLAERVQSTFLFTDCFKLNREAQENIVAHAQLKSQILANA 867

Query: 641  YITK-----------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
             + +           S+ FPG+++P WFR+Q  G++I    P     +K  G + CVVV+
Sbjct: 868  CLKRNHKGLVLEPLASVSFPGSDLPLWFRNQRMGTSIDTHLPPHWCDSKFRGLSLCVVVS 927

Query: 690  CSVSECCRHESVEDDRKCNLFDVV--CDRRSE------------GYDSYTSSYLGKISHV 735
                     +  ED  + + F V+  C  +SE            G++    S   +   +
Sbjct: 928  --------FKDYED--QTSRFSVICKCKFKSESGDCIRFICTLGGWNKLCGSSGHQSRKL 977

Query: 736  ESDHVFLG-SSIF--------AGENS--CKRSDEF-FFHIDRS-----CCEVKKCGIHFV 778
             SDHVFL  ++ F          +N+  C  +  F FF  D S       EV KCG+  +
Sbjct: 978  GSDHVFLSYNNCFHVKKFREDGNDNNRCCNTAASFKFFVTDDSKRKLGSFEVVKCGMGLL 1037

Query: 779  HA 780
            +A
Sbjct: 1038 YA 1039



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 170/356 (47%), Gaps = 45/356 (12%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENL 67
           ++++P  F+KM  L+ LKF        + S+ G P   L Y   +  P K         L
Sbjct: 466 MKLSPDVFTKMWNLKFLKFFS------LFSM-GYP---LEYLPSNFNPKK---------L 506

Query: 68  VSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTET 127
           V L +  S +  LW++ +N   L+ +D+ +SK L  L  L  A+N+E L+   C+SL + 
Sbjct: 507 VDLNLRHSHLKTLWEEEKNTAELRWLDISHSKDLLSLSGLLDARNIERLNAECCTSLIKC 566

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
            SSI+ ++ L  L+   C SL SLP  I  K LK L+L GCS L+  P ++      +L 
Sbjct: 567 -SSIRQMDSLVYLNFRECTSLKSLPKGISLKSLKSLILSGCSKLRTFPTISEN--IESLY 623

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL--- 244
           L G  I+ +P SI  L  +  L +  C +L ++ S++ K++ L+ + +  C  L+     
Sbjct: 624 LDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSKLKCFPEI 683

Query: 245 --EMPSCNI---DGTRSKEQP----SSELKL--------KKCPRPESLPSGQCMFKSLTS 287
             +M    I   D T  K+ P     S LK+        +     E LP   C    L+ 
Sbjct: 684 DEDMEHLEILLMDDTAIKQIPIKMCMSNLKMFTFGGSKFQGSTGYELLPFSGC--SHLSD 741

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           L + DC N  +LP+    L +++ L +    +  LPE +  L  L  L+LK+C +L
Sbjct: 742 LYLTDC-NLHKLPNNFSCLSSVHSLCLSRNNLEYLPESIKILHHLKSLDLKHCRKL 796



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 30/260 (11%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L  ++C   +SLP G  + KSL SL +  C      P    N+++L    +DGTAI+ +P
Sbjct: 578 LNFRECTSLKSLPKGISL-KSLKSLILSGCSKLRTFPTISENIESL---YLDGTAIKRVP 633

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FC 376
           E +  L  L+ L LK C +L ++ S++ K+KS++ + +S CS LK FPEI          
Sbjct: 634 ESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSKLKCFPEIDEDMEHLEIL 693

Query: 377 NIDGSGIERIPSSVL------------KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
            +D + I++IP  +             K    +  E LP S C    L+ L + DC  L 
Sbjct: 694 LMDDTAIKQIPIKMCMSNLKMFTFGGSKFQGSTGYELLPFSGC--SHLSDLYLTDC-NLH 750

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLT 483
           +LP+    L ++  L +    +  +P+S+  L  L  L LK C    SLP    +  +L 
Sbjct: 751 KLPNNFSCLSSVHSLCLSRNNLEYLPESIKILHHLKSLDLKHCRKLNSLP---VLPSNLQ 807

Query: 484 SLEIIDCKNFMRLPDEIGNL 503
            L+  DC +   + + + +L
Sbjct: 808 YLDAHDCASLETVANPMTHL 827


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 201/435 (46%), Gaps = 72/435 (16%)

Query: 4   INSEIQINPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPFTELRYFEWHQFPLKTLN- 60
           ++  I +    F+ M  LR L F    +K  +    LE +P  +LRY +W+ FP K+L  
Sbjct: 563 LSRHIHLKSDAFAMMDGLRFLDFDHVVDKMHLPPTGLEYLP-NKLRYLQWNGFPSKSLPP 621

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               E+LV L +  SK+ +LW  V+++ +L+RIDL  S  LT+LPDLS+A+NL  L L  
Sbjct: 622 SFCAEHLVELDLRKSKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLILVD 681

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SLTE  SS+QYL+KLE +DL RC +L S P  ++SK L+ L +  C ++   P ++  
Sbjct: 682 CPSLTEVPSSLQYLDKLEKIDLYRCYNLRSFPM-LYSKVLRYLEINRCLDVTTCPTISQN 740

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                L L    I+E+P S+   S +  L +  C ++          +F E        N
Sbjct: 741 --MELLILEQTSIKEVPQSVA--SKLELLDLSGCSKMT---------KFPE--------N 779

Query: 241 LQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           L+ +E    ++ GT  KE PSS         L +  C + ES        KSL  L +  
Sbjct: 780 LEDIE--DLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMKSLQHLNLSK 837

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
               E       ++ +L  L +DGT I+ELP  +  +  L  L L               
Sbjct: 838 SGIKEIPLISFKHMISLTFLYLDGTPIKELPLSIKDMVCLQHLSLTG------------- 884

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
                       + +K  PE+P        + +I +     + C+ LE++ S + +    
Sbjct: 885 ------------TPIKALPELP------PSLRKITT-----HDCASLETVTSIINISSLW 921

Query: 413 TSLEIIDCKKLERLP 427
             L+  +C KL++ P
Sbjct: 922 HGLDFTNCFKLDQKP 936



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 175/432 (40%), Gaps = 130/432 (30%)

Query: 107 LSLAQNLEILDLGYCSSLTETH---SSIQYL-NKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
            ++   L  LD  +   + + H   + ++YL NKL  L  +   S  SLP S  +++L  
Sbjct: 574 FAMMDGLRFLDFDHV--VDKMHLPPTGLEYLPNKLRYLQWNGFPS-KSLPPSFCAEHLVE 630

Query: 163 LVLR---------GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS 213
           L LR         G  ++ NL ++      S  P L     ELP  +    N+  L++  
Sbjct: 631 LDLRKSKLVKLWTGVKDVGNLRRID----LSDSPYL----TELPD-LSMAKNLVSLILVD 681

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE 273
           C  L  + SS+  L  LE I ++RC NL+   M    +            L++ +C    
Sbjct: 682 CPSLTEVPSSLQYLDKLEKIDLYRCYNLRSFPMLYSKV---------LRYLEINRC---- 728

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
                         L++  CP            Q +  LI++ T+I+E+P+ +      S
Sbjct: 729 --------------LDVTTCPTIS---------QNMELLILEQTSIKEVPQSVA-----S 760

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSS 389
           KLEL                     +++S CS +  FPE    I   ++ G+ I+ +PSS
Sbjct: 761 KLEL---------------------LDLSGCSKMTKFPENLEDIEDLDLSGTAIKEVPSS 799

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +  L          +SLC      SL++  C KLE   +    +++L+ L +  +GI+E+
Sbjct: 800 IQFL----------TSLC------SLDMNGCSKLESFSEITVPMKSLQHLNLSKSGIKEI 843

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P                 SF+ + S  ++         +D      LP  I ++  L+ L
Sbjct: 844 P---------------LISFKHMISLTFL--------YLDGTPIKELPLSIKDMVCLQHL 880

Query: 510 TIKGTAIREVPE 521
           ++ GT I+ +PE
Sbjct: 881 SLTGTPIKALPE 892



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 149/359 (41%), Gaps = 105/359 (29%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++GNL+ ++  + D   + ELP+ L     L  L L +C  L  + SS+  L  +E I++
Sbjct: 647 DVGNLRRID--LSDSPYLTELPD-LSMAKNLVSLILVDCPSLTEVPSSLQYLDKLEKIDL 703

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             C NL+ FP +       S + R     L++N+C                  L++  C 
Sbjct: 704 YRCYNLRSFPMLY------SKVLR----YLEINRC------------------LDVTTCP 735

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
            +          + +E L +E T I+EVP+S+A    SKL+L                  
Sbjct: 736 TIS---------QNMELLILEQTSIKEVPQSVA----SKLEL------------------ 764

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS-------------- 527
              L++  C    + P+   NLE ++ L + GTAI+EVP S+  L+              
Sbjct: 765 ---LDLSGCSKMTKFPE---NLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLE 818

Query: 528 ----------SLEWLVLSDNNLQIIP-ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
                     SL+ L LS + ++ IP  S   + SL  L L    ++ +P  +  +  L+
Sbjct: 819 SFSEITVPMKSLQHLNLSKSGIKEIPLISFKHMISLTFLYLDGTPIKELPLSIKDMVCLQ 878

Query: 577 YLDLFENNLDRIPEY---LRSFPT-------SIPS--EFTSLRLSVDLRNCLKLDPNEL 623
           +L L    +  +PE    LR   T       ++ S    +SL   +D  NC KLD   L
Sbjct: 879 HLSLTGTPIKALPELPPSLRKITTHDCASLETVTSIINISSLWHGLDFTNCFKLDQKPL 937


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 166/357 (46%), Gaps = 73/357 (20%)

Query: 30  KNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQN 86
           +  C +H    + F    LR   WH++PLK+L +  H + LV L M  S++  LW   ++
Sbjct: 608 QTDCKLHLSGDLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSSRLEXLWKGDKS 667

Query: 87  LVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
              LK I L +S+ LT+ PD S A NLE L L  C S+ + H SI  L KL  L+L  CK
Sbjct: 668 FEKLKFIKLSHSQYLTRTPDFSGAPNLERLILEGCKSMVKVHPSIGALQKLIFLNLXGCK 727

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLS 204
           +L S  +SIH   L+ L L GCS LK  P+M   +++S   LL     + ELPSSI  L+
Sbjct: 728 NLKSFASSIHMNSLQILTLSGCSKLKKFPEMLE-NMKSLRQLLLDETALRELPSSIGRLN 786

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL 264
            +  L + +CK+L ++  S+ KL            +LQ L +  C+              
Sbjct: 787 GLVLLNLTNCKKLVSLPQSLCKL-----------TSLQILTLAGCS-------------- 821

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           +LKK P                              DELG+L+ L  L  DG+ I+E+P 
Sbjct: 822 ELKKLP------------------------------DELGSLRCLVNLNADGSGIQEVPP 851

Query: 325 GLGQLALLSKLELKNCSELEYISS------------SIFKLKSVESIEISNCSNLKG 369
            +  L  L  L L  C +   + S            S+  L SV+++ +S+C+  +G
Sbjct: 852 SITLLTNLQVLSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDCNLSEG 908



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 200/480 (41%), Gaps = 105/480 (21%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C  L+S  SS+ M  SL  L +  C KL++ P+ L N+++L +L ++ T +RE+P
Sbjct: 721  LNLXGCKNLKSFASSIHM-NSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETALRELP 779

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+ +L  L  L L  C    SLP  L    SL  L +  C    +LPDE+G+L  L  L
Sbjct: 780  SSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNL 839

Query: 510  TIKGTAIREVPESLGQLSSLEWLVL-------------SDNNLQIIPESLNQLSSLVSLK 556
               G+ I+EVP S+  L++L+ L L             S   + +   SL  LSS+ +L 
Sbjct: 840  NADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLS 899

Query: 557  LSN-------------------------NNLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
            LS+                         NN   IP  L+ LS L YL L    +L  +PE
Sbjct: 900  LSDCNLSEGALPSDLSSLSSLESLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPE 959

Query: 591  Y--------------LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
                           L +F  S  +     +L+    +C +L  NE S+ +  G + Q +
Sbjct: 960  LPSTIQKVYADHCPSLETFSLSACASRKLNQLNFTFSDCFRLVENEHSDTV--GAILQGI 1017

Query: 637  NGETYITK---------------SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLM 680
               + I K                +  PG+ IP+WF HQ+ GS+++++ P P  YN KLM
Sbjct: 1018 QLASSIPKFVDANKGSPVPYNDFHVIVPGSSIPEWFIHQNMGSSVTVELP-PHWYNAKLM 1076

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
            G A C V               D            R    YDSY    L   S ++ DHV
Sbjct: 1077 GLAVCAVFHA------------DPIDWGYLQYSLYRGEHKYDSYM---LQTWSPMKGDHV 1121

Query: 741  FLG---------SSIFAGENSCKRSDEFFFHIDRSC-------CEVKKCGIHFVHAQRQR 784
            + G           ++ GE S      F  H  +SC         VKKCG+   + Q  +
Sbjct: 1122 WFGYQSLVGXEDDRMWFGERSGTXKILFSGHCIKSCJVCVQPEVVVKKCGVRLAYEQGDK 1181



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 38/217 (17%)

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEI 290
            PNL+ L +  C    +  K  PS         L L  C   +S  S   M  SL  L +
Sbjct: 691 APNLERLILEGCK---SMVKVHPSIGALQKLIFLNLXGCKNLKSFASSIHM-NSLQILTL 746

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   ++ P+ L N+++L +L++D TA+RELP  +G+L  L  L L NC +L  +  S+
Sbjct: 747 SGCSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSL 806

Query: 351 FKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS--------VLKLNK 395
            KL S++ + ++ CS LK  P+       +   N DGSGI+ +P S        VL L  
Sbjct: 807 CKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAG 866

Query: 396 CSK------LESLPS------SLCMFKSLTSLEIIDC 420
           C K      L S P+      SL    S+ +L + DC
Sbjct: 867 CKKRNVVFSLWSSPTVCLQLRSLLNLSSVKTLSLSDC 903


>gi|147859369|emb|CAN83953.1| hypothetical protein VITISV_018322 [Vitis vinifera]
          Length = 996

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 230/527 (43%), Gaps = 113/527 (21%)

Query: 14  TFSKMTELRLLKFCGSKN-KCMVHSLEGVPFT-ELRYFEWHQFPLKTLNILHWENLVSLK 71
            F+KM +LRLLK   S   +C +   +G  F   L Y  W        N  H E LV++ 
Sbjct: 381 VFAKMQKLRLLKVYYSHGVECKMLLPKGFEFPPNLNYLHWEGLVSLPSN-FHGEKLVAIS 439

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
           +  S + +L    + L  LK IDL  S+ L+K+P LS    LEIL+LG C          
Sbjct: 440 LKNSNIKELLIGEKCLAELKFIDLSNSQQLSKIPKLSRMPKLEILNLGGC---------- 489

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV 191
                     ++ CK  +S+      K+L+ L  R                         
Sbjct: 490 ----------VNFCKLHSSIGKFFEMKFLRVLNFRES----------------------- 516

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
           GI ELPSSI  L+++  L +  C + E    + F       + + R   L+ L +    I
Sbjct: 517 GIRELPSSIGSLTSLESLWLSKCSKFEKFPDNFF-------VTMRR---LRILGLSDSGI 566

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                KE P+S                +C+ ++L  L + +C NFE+ P+   N++ L+R
Sbjct: 567 -----KELPTSI---------------ECL-EALEVLLLDNCSNFEKFPEIQKNMENLDR 605

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL--KG 369
           L ++ + I+EL   +G L  L  LEL  C  L  + S I +L+S+    + +CSNL  + 
Sbjct: 606 LNLEDSGIKELSCLIGHLPRLVSLELSKCKNLRSVPSGILQLESLRMCYLFDCSNLIMED 665

Query: 370 FPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                  ++  S I  +PSS+ L L+ C  LE+LP+S+ M + ++ L + +C KL +LPD
Sbjct: 666 MEHSKGLSLRESAITELPSSIRLMLSNCENLETLPNSIGMTR-VSELVVHNCPKLHKLPD 724

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI- 487
            L +++ L EL V G  +                        ++P  L+   SL  L + 
Sbjct: 725 NLRSMQ-LTELNVSGCNLMA---------------------GAIPDDLWCLFSLKDLNVS 762

Query: 488 ---IDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLE 530
              IDC     +P  I  L  L+ LT+     ++E+PE    L  +E
Sbjct: 763 GNNIDC-----IPGGIIRLSRLRYLTMNNCLMLKEIPELPSSLRQIE 804



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 116/486 (23%)

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN---LQALNRLIIDGT 317
           S+  +L K P+   +P        L  L +  C NF +L   +G    ++ L  L    +
Sbjct: 464 SNSQQLSKIPKLSRMPK-------LEILNLGGCVNFCKLHSSIGKFFEMKFLRVLNFRES 516

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFK------------------------L 353
            IRELP  +G L  L  L L  CS+ E    + F                         L
Sbjct: 517 GIRELPSSIGSLTSLESLWLSKCSKFEKFPDNFFVTMRRLRILGLSDSGIKELPTSIECL 576

Query: 354 KSVESIEISNCSNLKGFPEIP-------FCNIDGSGIE-------RIPSSV-LKLNKCSK 398
           +++E + + NCSN + FPEI          N++ SGI+        +P  V L+L+KC  
Sbjct: 577 EALEVLLLDNCSNFEKFPEIQKNMENLDRLNLEDSGIKELSCLIGHLPRLVSLELSKCKN 636

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
           L S+PS +   +SL    + DC  L      + ++E  + L +  + I E+P S+     
Sbjct: 637 LRSVPSGILQLESLRMCYLFDCSNLI-----MEDMEHSKGLSLRESAITELPSSI----- 686

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +L L  C + E+LP+ + +++ ++ L + +C    +LPD + +++ L  L + G  +  
Sbjct: 687 -RLMLSNCENLETLPNSIGMTR-VSELVVHNCPKLHKLPDNLRSMQ-LTELNVSGCNLMA 743

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
                                  IP+ L  L SL  L +S NN++ IP  +  LS L+YL
Sbjct: 744 ---------------------GAIPDDLWCLFSLKDLNVSGNNIDCIPGGIIRLSRLRYL 782

Query: 579 DLFENN---LDRIPEYLRSFPTSIP-------------SEFTSLRLSVDLRNCLKLDPNE 622
            +  NN   L  IPE     P+S+              S      L   L NCLK    +
Sbjct: 783 TM--NNCLMLKEIPE----LPSSLRQIEAYGCPLLETLSSDAKHPLWSSLHNCLKSRIQD 836

Query: 623 LS-EIIKDGWMKQSVNGETYITKSMYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY--NK 678
                  + W+++      Y+   +  PG+  IP+W  H+S G  I++  P+   Y  N 
Sbjct: 837 FECPTDSEDWIRK------YLDVQVVIPGSRGIPEWISHKSMGHEITIDLPK-NWYEDNN 889

Query: 679 LMGFAF 684
            +GFA 
Sbjct: 890 FLGFAL 895


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 150/279 (53%), Gaps = 21/279 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFC--GSKNK---CMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           E++++P  F+KM++L+ L     GS+N+    +   LE +P  ELRY  W  +PL+ L +
Sbjct: 595 ELELSPQAFAKMSKLKFLDIYTKGSQNEGSLSLPQGLESLP-NELRYLRWEYYPLEFLPS 653

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L +P S++ +LW   +++V+L  + L  S LLT+LPD S A NL +LDL  
Sbjct: 654 KFSAENLVILNLPYSRLKKLWHGAKDIVNLNVLILSSSALLTELPDFSKATNLAVLDLQS 713

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C  LT  H S+  L  LE LDL  C SL SL ++ H   L  L L  C+ LK    +TS 
Sbjct: 714 CVGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQSNTHLSSLSYLSLYNCTALKEF-SVTSE 772

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           ++ + L L    I+ELPSSI   + + E L      +E++  SI  L  L  + +H C  
Sbjct: 773 NI-NELDLELTSIKELPSSIGLQTKL-EKLYLGHTHIESLPKSIKNLTRLRHLDLHHCSE 830

Query: 241 LQFL-EMP----SCNIDGTRSKEQ------PSSELKLKK 268
           LQ L E+P    + + DG  S E        S +LK KK
Sbjct: 831 LQTLPELPPSLETLDADGCVSLENVAFRSTASEQLKEKK 869



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 139/319 (43%), Gaps = 52/319 (16%)

Query: 444  TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
             G+  V  S+  L  L KL L  CSS +SL S  ++S            N   L +    
Sbjct: 715  VGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQSNTHLSSLSYLS----LYNCTALKEFSVT 770

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NN 561
             E +  L ++ T+I+E+P S+G  + LE L L   +++ +P+S+  L+ L  L L + + 
Sbjct: 771  SENINELDLELTSIKELPSSIGLQTKLEKLYLGHTHIESLPKSIKNLTRLRHLDLHHCSE 830

Query: 562  LERIPERLDPLSSLKYLDL-----FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL 616
            L+ +PE L P  SL+ LD       EN          +F ++   +    +  V   NCL
Sbjct: 831  LQTLPE-LPP--SLETLDADGCVSLEN---------VAFRSTASEQLKEKKKKVTFWNCL 878

Query: 617  KLDPNELSEIIKDGWMKQSVNGETYIT----------KSMY-FPGNEIPKWFRHQST-GS 664
            KL+   L  I  +  +        +IT          + MY +PG++IP+W  + +T   
Sbjct: 879  KLNEPSLKAIELNAQINMMNFSHKHITWDRDRDHDHNQGMYVYPGSKIPEWLEYSTTRHD 938

Query: 665  TISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSY 724
             I++       ++KL GF F  V+    SE                  +  + S+G D  
Sbjct: 939  YITIDLFSAPYFSKL-GFIFGFVIPTISSEGS---------------TLKFKISDGEDEG 982

Query: 725  TSSYLGKISH-VESDHVFL 742
               YL +  H +ESDHV+L
Sbjct: 983  IKMYLDRPRHGIESDHVYL 1001



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 26/198 (13%)

Query: 284 SLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAI-RELPEGLGQLALLSKLELKNC 340
           S  +L I++ P    ++L     ++  LN LI+  +A+  ELP+   +   L+ L+L++C
Sbjct: 656 SAENLVILNLPYSRLKKLWHGAKDIVNLNVLILSSSALLTELPD-FSKATNLAVLDLQSC 714

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
             L  +  S+F LK++E +++S CS+LK            S       S L L  C+ L+
Sbjct: 715 VGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQ---------SNTHLSSLSYLSLYNCTALK 765

Query: 401 SLPSSLCMFKSLTSLEI----IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
                     S+TS  I    ++   ++ LP  +G    LE+L +  T I  +PKS+  L
Sbjct: 766 EF--------SVTSENINELDLELTSIKELPSSIGLQTKLEKLYLGHTHIESLPKSIKNL 817

Query: 457 A-LSKLKLKKCSSFESLP 473
             L  L L  CS  ++LP
Sbjct: 818 TRLRHLDLHHCSELQTLP 835


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 148/322 (45%), Gaps = 65/322 (20%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++E L++L + G+ I+E+P S
Sbjct: 1093 LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSS 1152

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            + +L  L  L L  C +  +LP  +    SL +L I  C    +LP+ +G L+ L++L +
Sbjct: 1153 IQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYV 1212

Query: 512  K------------------------GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
            K                           +RE+P  +  L+SL+ LVL  N    IP+ ++
Sbjct: 1213 KDFDSMNCQFPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGIS 1272

Query: 548  QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
            QL  L+ L LS+  L                      L  IPE   +  T +  + TSL+
Sbjct: 1273 QLHKLIVLNLSHCKL----------------------LQHIPEPPSNLRTLVAHQCTSLK 1310

Query: 608  LSVDLRNCLKLDPNELSEIIKDGWMKQSVNG---ETYITKSMYFPGNEIPKWFRHQSTGS 664
            +S  L           S   K G  K    G   +T+I +S     N IP+W  HQ  GS
Sbjct: 1311 ISSSLL---------WSPFFKSGIQKFVPRGKVLDTFIPES-----NGIPEWISHQKKGS 1356

Query: 665  TISLKTPQPTGYN-KLMGFAFC 685
             I+L  PQ    N   +GFA C
Sbjct: 1357 KITLTLPQNWYENDDFLGFALC 1378



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 168/384 (43%), Gaps = 75/384 (19%)

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL----KSVESIEISNCSNLKGF 370
           DG ++  LP         +    K+  EL    S+I +L    K    + + N S+    
Sbjct: 578 DGYSLESLP---------TNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHL 628

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            EIP    D S +  +   +L L  C KLE LP  +  +K L +L   DC KL+R P+  
Sbjct: 629 TEIP----DFSSVPNL--EILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIK 682

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           GN+  L EL + GT I E+P S              SSF  L       K+L  L    C
Sbjct: 683 GNMRKLRELDLSGTAIEELPSS--------------SSFGHL-------KALKILSFRGC 721

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
               ++P ++  L  L+VL +    I E  +P  + +LSSL+ L L  N+ + IP ++N+
Sbjct: 722 SKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINR 781

Query: 549 LSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
           LS L  L LS+  NLE IPE     SSL+ LD    NL        +  T+    F S  
Sbjct: 782 LSRLQVLNLSHCQNLEHIPEL---PSSLRLLDAHGPNL--------TLSTASFLPFHS-- 828

Query: 608 LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS--MYFPGNE-IPKWFRHQSTGS 664
               L NC   +  +L++        Q+ N   Y      +  PG+  +P+W   +    
Sbjct: 829 ----LVNCFNSEIQDLNQC------SQNCNDSAYHGNGICIVLPGHSGVPEWMMGRR--- 875

Query: 665 TISLKTPQPTGY-NKLMGFAFCVV 687
             +++ PQ     N+ +GFA C V
Sbjct: 876 --AIELPQNWHQDNEFLGFAICCV 897



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 17/229 (7%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C   +SLPS  C FKSLT+L    C   E  P+ L +++ L +L + G+AI+E+P  
Sbjct: 1093 LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSS 1152

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            + +L  L  L L  C  L  +  SI  L S++++ I +C  LK  PE          + R
Sbjct: 1153 IQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPE---------NLGR 1203

Query: 386  IPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
            + S  +L +     +     SL    SL  L +I+C  L  +P  + +L +L+ L + G 
Sbjct: 1204 LQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLMGN 1262

Query: 445  GIREVPKSLAQL-ALSKLKLKKCSSFESLPS-----RLYVSKSLTSLEI 487
                +P  ++QL  L  L L  C   + +P      R  V+   TSL+I
Sbjct: 1263 QFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVAHQCTSLKI 1311



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 67/285 (23%)

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           SL SLPT+ H+K L  L+LRG SN+K L +    H                         
Sbjct: 581 SLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLH------------------------- 614

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
                    +L  I+ S        S+ +   P+  F  +P+  I            L L
Sbjct: 615 --------NKLNVINLS-------HSVHLTEIPD--FSSVPNLEI------------LTL 645

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP--E 324
           K C + E LP G   +K L +L   DC   +R P+  GN++ L  L + GTAI ELP   
Sbjct: 646 KGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSS 705

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
             G L  L  L  + CS+L  I + +  L S+E +++S C+ ++G      C +      
Sbjct: 706 SFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRL------ 759

Query: 385 RIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
              SS+ +LN K +   S+P+++     L  L +  C+ LE +P+
Sbjct: 760 ---SSLKELNLKSNDFRSIPATINRLSRLQVLNLSHCQNLEHIPE 801



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 109/240 (45%), Gaps = 36/240 (15%)

Query: 42  PFTELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
           P  EL YF W  + L++L    H ++LV L + GS + QLW   +    L  I+L +S  
Sbjct: 568 PSYELTYFHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVH 627

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP-------- 152
           LT++PD S   NLEIL L  C  L      I     L+ L    C  L   P        
Sbjct: 628 LTEIPDFSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRK 687

Query: 153 --------TSI----------HSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV--- 191
                   T+I          H K LK L  RGCS L  +P    C   S+L +L +   
Sbjct: 688 LRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCC--LSSLEVLDLSYC 745

Query: 192 GIEE--LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
            I E  +PS I  LS++ EL + S     +I ++I +L  L+ + +  C NL+ + E+PS
Sbjct: 746 NIMEGGIPSDICRLSSLKELNLKS-NDFRSIPATINRLSRLQVLNLSHCQNLEHIPELPS 804



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 15/254 (5%)

Query: 136  KLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  CK L SLP+SI   K L  L   GCS L++ P+ +    +   L L G  I
Sbjct: 1087 ELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAI 1146

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI+ L  + +L +  CK L N+  SI  L  L+++ I  CP L+  ++P  N+  
Sbjct: 1147 KEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELK--KLPE-NLGR 1203

Query: 254  TRSKE-QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             +S E     +     C  P SL SG C   SL  L +I+C     +P  + +L +L  L
Sbjct: 1204 LQSLEILYVKDFDSMNCQFP-SL-SGLC---SLRILRLINC-GLREIPSGICHLTSLQCL 1257

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            ++ G     +P+G+ QL  L  L L +C  L++I      L+++ +     C++LK    
Sbjct: 1258 VLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVA---HQCTSLKISSS 1314

Query: 373  IPFCNIDGSGIERI 386
            + +     SGI++ 
Sbjct: 1315 LLWSPFFKSGIQKF 1328



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 84   VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
            ++++  LK++DL  S +      +   + L+ L+L YC +L     SI  L  L+ L + 
Sbjct: 1130 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1189

Query: 144  RCKSLTSLP------TSIHSKYLKRLVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEEL 196
             C  L  LP       S+   Y+K      C      P ++  C LR  L L+  G+ E+
Sbjct: 1190 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQ----FPSLSGLCSLR-ILRLINCGLREI 1244

Query: 197  PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            PS I  L+++ + L+    +  +I   I +L  L  + +  C  LQ +  P  N+
Sbjct: 1245 PSGICHLTSL-QCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNL 1298


>gi|168068939|ref|XP_001786264.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661795|gb|EDQ48924.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 160/301 (53%), Gaps = 15/301 (4%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
           +L L+ C   E+LP       SL  L++  C + + L + +GNL +L +L + G  +++ 
Sbjct: 22  KLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNLNSLVKLNLYGCGSLKA 81

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           L E +G L  L KL L  C  L+ +  SI  L S+  ++++ C +LK  P+         
Sbjct: 82  LLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPK--------- 132

Query: 382 GIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
            I  + S + L L  C  LE+LP S+    SL  L++  CK L+ LP+ +GNL +L +L 
Sbjct: 133 SIGNLNSPMKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLN 192

Query: 441 VEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           + G   +  +PKS+  L +L  L L  C S ++LP  +    SL  L++  C +   LP+
Sbjct: 193 LYGCRSLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALPE 252

Query: 499 EIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK 556
            IGNL  L  L +    ++  +P+S+G L+SL  L L    +L+ +PES+  L+SLV L 
Sbjct: 253 SIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVDLDLFRCRSLKALPESIGNLNSLVDLD 312

Query: 557 L 557
           L
Sbjct: 313 L 313



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 165/300 (55%), Gaps = 22/300 (7%)

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----- 372
           +++ LPE +G L  L KL L++C  LE +  SI  L S+  +++  C +LK   E     
Sbjct: 6   SLKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNL 65

Query: 373 --IPFCNIDGSG-----IERIP--SSVLKLN--KCSKLESLPSSLCMFKSLTSLEIIDCK 421
             +   N+ G G     +E I   +S++KLN   C  L++LP S+    SL  L++  C+
Sbjct: 66  NSLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICR 125

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVS 479
            L+ LP  +GNL +  +L +     +  +P+S+  L +L KL L+ C S ++LP  +   
Sbjct: 126 SLKALPKSIGNLNSPMKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESIGNL 185

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVL-SDN 537
            SL  L +  C++   LP  IGNL  L  L + G  +++ +PES+G L+SL  L L +  
Sbjct: 186 NSLVKLNLYGCRSLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCG 245

Query: 538 NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
           +L+ +PES+  L+SLV L L +  +LE +P+ +  L+SL  LDLF   +L  +PE + + 
Sbjct: 246 SLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVDLDLFRCRSLKALPESIGNL 305



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 173/368 (47%), Gaps = 69/368 (18%)

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
           C SL +LP SI +   L +L LR C +L                      E LP SI  L
Sbjct: 4   CGSLKALPESIGNLNSLVKLNLRDCQSL----------------------EALPESIDNL 41

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
           +++ +L +Y+C  L+ +  SI  L  L  + ++ C +L+ L                   
Sbjct: 42  NSLVDLDLYTCGSLKALRESIGNLNSLVKLNLYGCGSLKALL------------------ 83

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID-GTAIREL 322
                    ES+ +      SL  L +  C + + LP+ +GNL +L  L ++   +++ L
Sbjct: 84  ---------ESIGN----LNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKAL 130

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P+ +G L    KL L  C  LE +  SI  L S+  +++  C +LK  PE    N++   
Sbjct: 131 PKSIGNLNSPMKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPE-SIGNLN--- 186

Query: 383 IERIPSSVLKLN--KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
                 S++KLN   C  LE+LP S+    SL  L +  C  L+ LP+ +GNL +L +L 
Sbjct: 187 ------SLVKLNLYGCRSLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLD 240

Query: 441 VEGTG-IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           +   G ++ +P+S+  L +L KL L  C S E+LP  +    SL  L++  C++   LP+
Sbjct: 241 LYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVDLDLFRCRSLKALPE 300

Query: 499 EIGNLEYL 506
            IGNL  L
Sbjct: 301 SIGNLNSL 308



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 161/325 (49%), Gaps = 23/325 (7%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           C SL     SI  LN L  L+L  C+SL +LP SI +   L  L L  C +LK L +   
Sbjct: 4   CGSLKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIG 63

Query: 180 CHLRS--TLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
            +L S   L L G G ++ L  SI  L+++ +L +Y C  L+ +  SI  L  L  + ++
Sbjct: 64  -NLNSLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLN 122

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C +L+ L     N++          +L L  C   E+LP       SL  L++  C + 
Sbjct: 123 ICRSLKALPKSIGNLNSPM-------KLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSL 175

Query: 297 ERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           + LP+ +GNL +L +L + G  ++  LP+ +G L  L  L L  C  L+ +  SI  L S
Sbjct: 176 KALPESIGNLNSLVKLNLYGCRSLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNS 235

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTS 414
           +  +++  C +LK  PE          I  + S V L L  C  LE+LP S+    SL  
Sbjct: 236 LVDLDLYTCGSLKALPE---------SIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVD 286

Query: 415 LEIIDCKKLERLPDELGNLEALEEL 439
           L++  C+ L+ LP+ +GNL +L +L
Sbjct: 287 LDLFRCRSLKALPESIGNLNSLVDL 311



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 5/191 (2%)

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLA 454
           C  L++LP S+    SL  L + DC+ LE LP+ + NL +L +L +   G ++ + +S+ 
Sbjct: 4   CGSLKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIG 63

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK- 512
            L +L KL L  C S ++L   +    SL  L +  C +   LP+ IGNL  L  L +  
Sbjct: 64  NLNSLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNI 123

Query: 513 GTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLD 570
             +++ +P+S+G L+S   L L    +L+ +PES+  L+SLV L L    +L+ +PE + 
Sbjct: 124 CRSLKALPKSIGNLNSPMKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESIG 183

Query: 571 PLSSLKYLDLF 581
            L+SL  L+L+
Sbjct: 184 NLNSLVKLNLY 194



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 135/311 (43%), Gaps = 42/311 (13%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           +  +NS + ++ YT   +  LR  +  G+ N             +L  +          +
Sbjct: 38  IDNLNSLVDLDLYTCGSLKALR--ESIGNLNS----------LVKLNLYGCGSLKALLES 85

Query: 61  ILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI-LDL 118
           I +  +LV L + G   +  L + + NL SL  +DL   + L  LP      N  + L+L
Sbjct: 86  IGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSPMKLNL 145

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
           G C SL     SI  LN L  LDL  CKSL +LP SI              NL +L K+ 
Sbjct: 146 GVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESI-------------GNLNSLVKLN 192

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
               RS        +E LP SI  L+++ +L +Y C  L+ +  SI  L  L  + ++ C
Sbjct: 193 LYGCRS--------LEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTC 244

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            +L+ L     N++          +L L  C   E+LP       SL  L++  C + + 
Sbjct: 245 GSLKALPESIGNLNSLV-------KLNLGDCQSLEALPKSIGNLNSLVDLDLFRCRSLKA 297

Query: 299 LPDELGNLQAL 309
           LP+ +GNL +L
Sbjct: 298 LPESIGNLNSL 308


>gi|307135798|gb|ADN33677.1| TIR-LRR-NBS disease resistance protein [Cucumis melo subsp. melo]
          Length = 1139

 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 195/413 (47%), Gaps = 42/413 (10%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
           + + ++P  F  +  LRLL     +N      ++ +P   L++ EWH F   +L +    
Sbjct: 385 TRLIVDPQAFRNLKNLRLLIV---RNARFCAKIKYLP-ESLKWIEWHGFSQPSLPSHFIV 440

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NLV L +  S +    + ++    LK ++L YS  L K+PD S A NLE L L  C++L
Sbjct: 441 KNLVGLDLQHSFIKDFGNRLKVGEWLKHVNLSYSTSLKKIPDFSAASNLEKLYLRDCTNL 500

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSC--- 180
              H SI  L KL +L L  C  +  LPTS    + LK L L GC+ L+ +P  +S    
Sbjct: 501 RTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKLWSLKHLDLSGCTKLEKIPDFSSALNL 560

Query: 181 ---HLRSTLPLLGV-------------------GIEELPSSIKCLSNIGELLIYSCKRLE 218
              HL     L  +                    ++ LP+S   L+++  L +YSC++LE
Sbjct: 561 EILHLSRCTNLRTIHNSVFSLHKLISLYLDFCSTLKTLPTSCFMLTSLNTLTLYSCQKLE 620

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
            +   +     L S+ + +C NL+ +     ++D  ++       L  +KC     LPS 
Sbjct: 621 EVPD-LSSASNLNSLNVEKCTNLRGIHESIGSLDRLQT-------LVSRKCTNLVKLPS- 671

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
               KSL  L++  C   E  P    N+++L  L +  TAI++LP  +G L  L +L L 
Sbjct: 672 ILRLKSLKHLDLSWCSKLESFPIIDENMKSLRFLDLSFTAIKDLPSSIGYLTELPRLNLG 731

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--FCNIDGSGIERIPSS 389
           NC+ L  +  +I  L S+  +E+ NC +L+  P +P    N+D  G E +  S
Sbjct: 732 NCTSLISLPKTISLLMSLLDLELRNCRSLQEIPNLPQNIQNLDAYGCELLTKS 784



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 177/357 (49%), Gaps = 29/357 (8%)

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LP   + +NL  LDL + S + +  + ++    L+ ++L    SL  +P    +  L++L
Sbjct: 434 LPSHFIVKNLVGLDLQH-SFIKDFGNRLKVGEWLKHVNLSYSTSLKKIPDFSAASNLEKL 492

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLG--VGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            LR C+NL+ + +   C ++ TL  L     I++LP+S   L ++  L +  C +LE I 
Sbjct: 493 YLRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKLWSLKHLDLSGCTKLEKIP 552

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
                L  LE + + RC NL+ +     ++    S       L L  C   ++LP+   M
Sbjct: 553 DFSSALN-LEILHLSRCTNLRTIHNSVFSLHKLIS-------LYLDFCSTLKTLPTSCFM 604

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNC 340
             SL +L +  C   E +PD L +   LN L ++  T +R + E +G L  L  L  + C
Sbjct: 605 LTSLNTLTLYSCQKLEEVPD-LSSASNLNSLNVEKCTNLRGIHESIGSLDRLQTLVSRKC 663

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV--- 390
           + L  + S I +LKS++ +++S CS L+ FP I        F ++  + I+ +PSS+   
Sbjct: 664 TNLVKLPS-ILRLKSLKHLDLSWCSKLESFPIIDENMKSLRFLDLSFTAIKDLPSSIGYL 722

Query: 391 -----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                L L  C+ L SLP ++ +  SL  LE+ +C+ L+ +P+   N++ L+    E
Sbjct: 723 TELPRLNLGNCTSLISLPKTISLLMSLLDLELRNCRSLQEIPNLPQNIQNLDAYGCE 779



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 59/392 (15%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSE 342
           +L  L + DC N   +   +  L  L  L + G   I++LP    +L  L  L+L  C++
Sbjct: 488 NLEKLYLRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKLWSLKHLDLSGCTK 547

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE I      L ++E + +S C+NL+      F       + ++ S  L L+ CS L++L
Sbjct: 548 LEKIPDFSSAL-NLEILHLSRCTNLRTIHNSVF------SLHKLIS--LYLDFCSTLKTL 598

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSK 460
           P+S  M  SL +L +  C+KLE +PD L +   L  L VE  T +R + +S+  L  L  
Sbjct: 599 PTSCFMLTSLNTLTLYSCQKLEEVPD-LSSASNLNSLNVEKCTNLRGIHESIGSLDRLQT 657

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L  +KC++   LPS L + KSL  L++  C      P    N++ L+ L +  TAI+++P
Sbjct: 658 LVSRKCTNLVKLPSILRL-KSLKHLDLSWCSKLESFPIIDENMKSLRFLDLSFTAIKDLP 716

Query: 521 ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
            S+G L+ L  L L +  +L  +P++++ L SL+ L+L N  +L+ IP            
Sbjct: 717 SSIGYLTELPRLNLGNCTSLISLPKTISLLMSLLDLELRNCRSLQEIP------------ 764

Query: 579 DLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC--LKLDPNELSEIIKDGWMKQSV 636
                          + P +I         ++D   C  L   P+ + +II     KQ +
Sbjct: 765 ---------------NLPQNIQ--------NLDAYGCELLTKSPDNIVDIIS---QKQDL 798

Query: 637 N-GETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
             GE  I++     G EIPKWF +++T + +S
Sbjct: 799 TLGE--ISREFLLMGVEIPKWFSYKTTSNLVS 828



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 5/151 (3%)

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
           T ++++P   A   L KL L+ C++  ++   ++    LT L +  C    +LP     L
Sbjct: 475 TSLKKIPDFSAASNLEKLYLRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKL 534

Query: 504 EYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-N 560
             LK L + G T + ++P+    L +LE L LS   NL+ I  S+  L  L+SL L   +
Sbjct: 535 WSLKHLDLSGCTKLEKIPDFSSAL-NLEILHLSRCTNLRTIHNSVFSLHKLISLYLDFCS 593

Query: 561 NLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
            L+ +P     L+SL  L L+    L+ +P+
Sbjct: 594 TLKTLPTSCFMLTSLNTLTLYSCQKLEEVPD 624


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 115/221 (52%), Gaps = 12/221 (5%)

Query: 7   EIQINPYTFSKMTELRLLKFC-------GSKNKCMVHSLEGVPF--TELRYFEWHQFPLK 57
           EI      F+ M  LRLLK           + KC VH   G  F   ELR+  W+++PLK
Sbjct: 570 EINFTNEAFAPMNRLRLLKVYTLNFLMDSKREKCKVHFSRGFKFHCEELRHLYWYEYPLK 629

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L N  + +NLV L MP S++ QLW   + L +LK ++LK+SK LT+ PD S   NLE L
Sbjct: 630 SLPNDFNLKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKHSKFLTETPDFSRVTNLERL 689

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP 175
            L  C SL + H S+  LNKL  L L  CK L SLP+ I   K L+  +L GCS  + LP
Sbjct: 690 VLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLKCLEVFILSGCSKFEELP 749

Query: 176 K-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
           +   +  +       G  I  LPSS   L N+  L    CK
Sbjct: 750 ENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFERCK 790



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 195/447 (43%), Gaps = 48/447 (10%)

Query: 299  LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            LP++  NL+ L  L +  + I++L +G   L  L  + LK+ S+    +    ++ ++E 
Sbjct: 631  LPNDF-NLKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKH-SKFLTETPDFSRVTNLER 688

Query: 359  IEISNCSNL-KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
            + +  C +L K  P +   N           + L L  C  L+SLPS +C  K L    +
Sbjct: 689  LVLKGCISLYKVHPSLGDLN---------KLNFLSLKNCKMLKSLPSCICDLKCLEVFIL 739

Query: 418  IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
              C K E LP+  GNLE L+E   +GT IR +P S + L  L  L  ++C      PS  
Sbjct: 740  SGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFERCKG--PPPSTS 797

Query: 477  YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
            +     +S    +  NF+  P    +      L+    +     +SLG LSSLE L LS+
Sbjct: 798  WWLPRRSS----NFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLSSLEDLDLSE 853

Query: 537  NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            NN   +P ++++L  L  L L N   L+ +PE    + S+            +     S 
Sbjct: 854  NNFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSI------------MARNCTSL 901

Query: 596  PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPK 655
             T     F+SL ++V L+  +    N      +DG +  +++   +        G+ IP 
Sbjct: 902  ETISNQSFSSLLMTVRLKEHIYCPIN------RDGLLVPALSAVVF--------GSRIPD 947

Query: 656  WFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCD 715
            W R+QS+GS +  + P     +  +G A CVV    +        +   R C LF     
Sbjct: 948  WIRYQSSGSEVKAELPPNWFDSNFLGLALCVVTVPRLVSLADFFGLF-WRSCTLFYSTSS 1006

Query: 716  RRSEGYDSYTSSYLGKISHVESDHVFL 742
              S  +D YT     K   VESDH++L
Sbjct: 1007 HASSSFDVYTYPNHLK-GKVESDHLWL 1032


>gi|77696205|gb|ABB00837.1| disease resistance protein [Arabidopsis thaliana]
 gi|77696211|gb|ABB00840.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKTLN-IL 62
           E+ I+  +F +M  LR LK   S++     VH  E   F   LR   W  +P K+L    
Sbjct: 37  EVVISGKSFKRMPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTF 96

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + LV L MP S++ +LW+  Q L  LK+++L  S+ L +LPDLS A NL  LDL YC 
Sbjct: 97  QPQYLVELYMPSSQLEKLWEGTQPLTHLKKMNLFASRHLKELPDLSNATNLARLDLSYCE 156

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SS  +L+KLE L+++ C +L  +P  ++   L+ + +RGCS L+N+P M++   
Sbjct: 157 SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNMRGCSRLRNIPVMSTN-- 214

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            + L +    +EE+P SI+  S +  L + S  +L+ I+     L+ L+ I
Sbjct: 215 ITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLI 265



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 38/290 (13%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S+LE L         L  + +   + L+ LPD L N   L  L +     + E+P S + 
Sbjct: 109 SQLEKLWEGTQPLTHLKKMNLFASRHLKELPD-LSNATNLARLDLSYCESLVEIPSSFSH 167

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ SL ++ +  C     +P    N+  L V     T
Sbjct: 168 LHKLEWLEMNNCINLQVIPAHMNLA-SLETVNMRGCSRLRNIPVMSTNITQLYV---SRT 223

Query: 515 AIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           A+ E+P S+   S LE L +S +     +  +P SL QL       L ++++E IPE + 
Sbjct: 224 AVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLD------LIDSDIETIPECIK 277

Query: 571 PLSSLKYLDLFE----NNLDRIPEYLRSFPT----SIPSEFTSL---RLSVDLRNCLKLD 619
            L  L  L+L       +L  +P  LR        S+ + F  L   +  ++  NC KL 
Sbjct: 278 SLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAELNFTNCFKLG 337

Query: 620 PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
                 I++           + +  +   PG E+P  F HQ  G+T++++
Sbjct: 338 KQAQRAIVQ----------RSLLLGTALLPGREVPAEFDHQGKGNTLTIR 377



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 26/208 (12%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L +L+ +N  +     ++ELP+ L     L++L+L  C  L  I SS   L  +E +E++
Sbjct: 121 LTHLKKMN--LFASRHLKELPD-LSNATNLARLDLSYCESLVEIPSSFSHLHKLEWLEMN 177

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC NL+  P     +++ + +E +      +  CS+L ++P    M  ++T L  +    
Sbjct: 178 NCINLQVIP----AHMNLASLETV-----NMRGCSRLRNIP---VMSTNITQL-YVSRTA 224

Query: 423 LERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           +E +P  +     LE L V  +    GI  +P SL QL L        S  E++P  +  
Sbjct: 225 VEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLID------SDIETIPECIKS 278

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
              L  L +  C+    LP+   +L +L
Sbjct: 279 LHLLYILNLSGCRRLASLPELPSSLRFL 306



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 110/286 (38%), Gaps = 72/286 (25%)

Query: 150 SLPTSIHSKYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           SLP +   +YL  L +   S L+ L + T    HL+         ++ELP  +   +N+ 
Sbjct: 91  SLPPTFQPQYLVELYMPS-SQLEKLWEGTQPLTHLKKMNLFASRHLKELPD-LSNATNLA 148

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK 267
            L +  C+ L  I SS   L  LE + ++ C NLQ +                       
Sbjct: 149 RLDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVI----------------------- 185

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
                           SL ++ +  C     +P    N+    +L +  TA+ E+P    
Sbjct: 186 ---------PAHMNLASLETVNMRGCSRLRNIPVMSTNI---TQLYVSRTAVEEMPPS-- 231

Query: 328 QLALLSKLELKNCSELEYIS-SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
                    ++ CS LE +S SS  KLK +  + IS    LK        ++  S IE I
Sbjct: 232 ---------IRFCSRLERLSVSSSGKLKGITHLPIS----LKQL------DLIDSDIETI 272

Query: 387 PS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           P          +L L+ C +L SLP    +  SL  L   DC+ LE
Sbjct: 273 PECIKSLHLLYILNLSGCRRLASLPE---LPSSLRFLMADDCESLE 315


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 238/491 (48%), Gaps = 44/491 (8%)

Query: 130 SIQYLNKLEVLDLDRCK------SLTSLP-TSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           +I  L KLE L L +        +L +LP  +   + LKRL    C+NL+ +P + +   
Sbjct: 34  AIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEW-PCNNLEAIPVIITKFP 92

Query: 183 R-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           +   L L    I+E+P S+  L N+ +L + +  +++ I  S+  L  L+ + +    N 
Sbjct: 93  KLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDL--SANH 150

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           Q  E+P   +    + +Q    L+L   P  E +P       SL  L + D    + +PD
Sbjct: 151 QIKEIPDS-LAALVNLQQ----LQLGGNPIKE-IPYVLTTLVSLQQLHLNDT-GIKEIPD 203

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            L  L  L +L +    I+E+P+ L  L+ L +L+L N + ++ I  S+ KL S++ +++
Sbjct: 204 SLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQL-NFNRIKKIPDSLAKLASLQQLDL 262

Query: 362 SNCSNLKGFPEIP--FC--------NIDGSGIERIPSSVLKLNKCSKL-------ESLPS 404
               N+    EIP  F         ++  + I++IP S  KL    +L       + +P 
Sbjct: 263 ----NINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPD 318

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
           S     SL  L +    K+E +PD    L  L++L +    I+EVP SLA L  L +L  
Sbjct: 319 SFGKLASLQQLNL-SHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGF 377

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +  + +P  L    +L  L+I        +PD +  L +L+ L +  T I E+P+ L
Sbjct: 378 S-SNQIKEIPDSLATLVNLQQLDI-SSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFL 435

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             L +L+ L LS N ++ IP+S  +L+SL +L L +N + +IP  L+ L +L+ LDL  N
Sbjct: 436 STLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLN 495

Query: 584 NLDRIPEYLRS 594
            +   PE L S
Sbjct: 496 PIPVSPEILGS 506



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 28/331 (8%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ++LP      + L  LE   C N E +P  +     L +L +    I+E+PE L  L  L
Sbjct: 59  KTLPPETTQLQKLKRLEW-PCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINL 117

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
            +L+L    +++ I  S+  L +++ +++S    +K                 IP S+  
Sbjct: 118 QQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIK----------------EIPDSLAA 161

Query: 393 LNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L    +L+        +P  L    SL  L + D   ++ +PD L  L  L++L +    
Sbjct: 162 LVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTG-IKEIPDSLAALVNLQQLYLYNNQ 220

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           I+E+P SLA L+ L +L+L   +  + +P  L    SL  L++ +      +PD    L+
Sbjct: 221 IKEIPDSLAALSNLQRLQLN-FNRIKKIPDSLAKLASLQQLDL-NINQISEIPDSFATLK 278

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L +    I+++P+S G+L+SL+ L L  N ++ IP+S  +L+SL  L LS+N +E 
Sbjct: 279 NLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEE 338

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           IP+    L +L+ L L+ N +  +P+ L + 
Sbjct: 339 IPDSFATLVNLQQLYLYNNPIKEVPDSLATL 369



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 34/270 (12%)

Query: 377 NIDGSGIERIPSSVLKLNKC--------------SKLESLPSSLCMFKSLTSLEIIDCKK 422
           ++ G  ++ +P ++ KL K               + L++LP      + L  LE   C  
Sbjct: 22  DLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEW-PCNN 80

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           LE +P  +     L++L +    I+E+P+SL+ L  L +L L      + +P  L    +
Sbjct: 81  LEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALIN 140

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           L  L++        +PD +  L  L+ L + G  I+E+P  L  L SL+ L L+D  ++ 
Sbjct: 141 LQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKE 200

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP----- 596
           IP+SL  L +L  L L NN ++ IP+ L  LS+L+ L L  N + +IP+ L         
Sbjct: 201 IPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQL 260

Query: 597 -------TSIPSEFTSLRLSVDLRNCLKLD 619
                  + IP  F +      L+N  KLD
Sbjct: 261 DLNINQISEIPDSFAT------LKNLQKLD 284


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 200/436 (45%), Gaps = 83/436 (19%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++   ++L ++GT I+E+P S
Sbjct: 1127 LRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSS 1186

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            + +L  L  L L  C +  +LP  +    SL +L ++ C    +LP+ +G L+ L+ L +
Sbjct: 1187 IQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYV 1246

Query: 512  K------------------------GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
            K                           +RE+P  +  LSSL+ L L  N    IP+ +N
Sbjct: 1247 KDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDGIN 1306

Query: 548  QLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTS 605
            QL +L+   LS+   L+ IPE   P SSL+YLD  + ++L+     + S P+++      
Sbjct: 1307 QLYNLIVFDLSHCQMLQHIPEL--P-SSLEYLDAHQCSSLE-----ILSSPSTL------ 1352

Query: 606  LRLSVDLRNCLKLDPNELSEIIKDG-WMKQSVNG-ETYITKSMYFPG-NEIPKWFRHQST 662
              L   L  C K      S I +   +   SV   E      M+ PG N IP W  HQ  
Sbjct: 1353 --LWSSLFKCFK------SRIQRQKIYTLLSVQEFEVNFKVQMFIPGSNGIPGWISHQKN 1404

Query: 663  GSTISLKTPQPTGYN-KLMGFAFCVV-VACSVSECCRHESVEDDRKCNLFDVV------- 713
            GS I+++ P+    N   +GFA C + V   + E  R    + +     F +V       
Sbjct: 1405 GSKITMRLPRYWYENDDFLGFALCSLHVPLDIEEENRSFKCKLNFNNRAFLLVDDFWSKR 1464

Query: 714  -CDRRSEGYDS-------YTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDR 765
             C+R   G +S       Y  S + K  H  +++  L +S            E+F     
Sbjct: 1465 NCERCLHGDESNQVWLIYYPKSKIPKKYH-SNEYRTLNTSF----------SEYF---GT 1510

Query: 766  SCCEVKKCGIHFVHAQ 781
               +V++CG HF++AQ
Sbjct: 1511 EPVKVERCGFHFIYAQ 1526



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 189/440 (42%), Gaps = 82/440 (18%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL----K 354
           LP +      L  L  DG ++  LP         +    K+  EL    S+I +L    K
Sbjct: 589 LPRDFEFSSKLTYLHWDGYSLESLP---------TNFHAKDLVELILRGSNIKQLWRGNK 639

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
               +++ N +      EIP    D S +  +   +L L  C KLE LP  +  +K L +
Sbjct: 640 LHNELKVINLNYSVHLTEIP----DFSSVPNL--EILTLEGCVKLECLPRGIYKWKYLQT 693

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L    C KL+R P+  GN+  L EL + GT I+ +P SL               FE L  
Sbjct: 694 LSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSL---------------FEHL-- 736

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWL 532
                K+L  L         ++P +I  L  L+VL +    I E  +P  +  LSSL+ L
Sbjct: 737 -----KALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKEL 791

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
            L  N+ + IP ++NQLS L  L LS+  NL+ IPE   P SSL+ LD   +N       
Sbjct: 792 NLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPEL--P-SSLRLLDAHGSN------- 841

Query: 592 LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS-EIIKDGWMKQSVNGETYITKS--MYF 648
               PTS  + F  +     L NC   +  +L+     + W + SV+  TY +K   +  
Sbjct: 842 ----PTSSRASFLPVH---SLVNCFNSEIQDLNCSSRNEVWSENSVS--TYGSKGICIVL 892

Query: 649 PGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFAFCVVVACSVSECCRHESVEDDRK 706
           PG+  +P+W         I+ + PQ     N+ +GFA C V               DD  
Sbjct: 893 PGSSGVPEWIMDD---QGIATELPQNWNQNNEFLGFALCCVYV-----------PLDDES 938

Query: 707 CNLFDVVCDRRSEGYDSYTS 726
            ++ +   D RSE   ++TS
Sbjct: 939 EDVSENESDNRSEDESAHTS 958



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 36/269 (13%)

Query: 258  EQPS--SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
            E PS    L L+ C   +SLPS  C FKSLT+L    C   E  P+ L ++    +L +D
Sbjct: 1117 ENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLD 1176

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            GTAI+E+P                        SSI +L+ ++ + ++ C NL   PE   
Sbjct: 1177 GTAIKEIP------------------------SSIQRLRGLQYLNLAYCENLVNLPE-SI 1211

Query: 376  CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            CN+            L +  C KL  LP +L   +SL  L + D   +      L  L +
Sbjct: 1212 CNL-------TSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCS 1264

Query: 436  LEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            L  L++   G+RE+P  +  L +L  L L+  + F S+P  +    +L   ++  C+   
Sbjct: 1265 LITLQLINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQ 1323

Query: 495  RLPDEIGNLEYLKVLTIKGTAIREVPESL 523
             +P+   +LEYL         I   P +L
Sbjct: 1324 HIPELPSSLEYLDAHQCSSLEILSSPSTL 1352



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 138/360 (38%), Gaps = 100/360 (27%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF----------------TELRYFEW 51
           IQ    +F +M  LRLLK        ++      P+                ++L Y  W
Sbjct: 545 IQFAKESFKQMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEFSSKLTYLHW 604

Query: 52  HQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
             + L++L    H ++LV L + GS + QLW   +    LK I+L YS  LT++PD S  
Sbjct: 605 DGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSV 664

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS 169
            NLEI                        L L+ C  L  LP  I+  KYL+ L  RGCS
Sbjct: 665 PNLEI------------------------LTLEGCVKLECLPRGIYKWKYLQTLSCRGCS 700

Query: 170 NLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
            LK  P++   ++R    L L G  I+ LPSS+                           
Sbjct: 701 KLKRFPEIKG-NMRKLRELDLSGTAIKVLPSSL--------------------------F 733

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
           + L+++ I                            L  +   +   +P   C   SL  
Sbjct: 734 EHLKALEI----------------------------LSFRMSSKLNKIPIDICCLSSLEV 765

Query: 288 LEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           L++  C   E  +P ++ +L +L  L +     R +P  + QL+ L  L L +C  L++I
Sbjct: 766 LDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHI 825



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%)

Query: 131  IQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
            I+  ++L+ L L  CK+L SLP+SI   K L  L   GCS L++ P+ +    +   L L
Sbjct: 1116 IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDL 1175

Query: 189  LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
             G  I+E+PSSI+ L  +  L +  C+ L N+  SI  L  L ++ +  CP L   ++P 
Sbjct: 1176 DGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLN--KLPE 1233

Query: 249  CNIDGTRSKEQ-PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+   +S E     +L    C  P SL SG C   SL +L++I+C     +P  + +L 
Sbjct: 1234 -NLGRLQSLEYLYVKDLDSMNCQLP-SL-SGLC---SLITLQLINC-GLREIPSGIWHLS 1286

Query: 308  ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            +L  L + G     +P+G+ QL  L   +L +C  L++I        S+E ++   CS+L
Sbjct: 1287 SLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELP---SSLEYLDAHQCSSL 1343

Query: 368  K 368
            +
Sbjct: 1344 E 1344



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 67/309 (21%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
            ++ +KL  L  D   SL SLPT+ H+K L  L+LRG SN+K L +    H         
Sbjct: 593 FEFSSKLTYLHWDG-YSLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLH--------- 641

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
                            EL              +  L +  S+ +   P+  F  +P+  
Sbjct: 642 ----------------NEL-------------KVINLNY--SVHLTEIPD--FSSVPNLE 668

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           I            L L+ C + E LP G   +K L +L    C   +R P+  GN++ L 
Sbjct: 669 I------------LTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLR 716

Query: 311 RLIIDGTAIRELPEGLGQ-LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
            L + GTAI+ LP  L + L  L  L  +  S+L  I   I  L S+E +++S+C+ ++G
Sbjct: 717 ELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEG 776

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                 C++         SS+ +LN K +   S+P+++     L  L +  C+ L+ +P+
Sbjct: 777 GIPSDICHL---------SSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPE 827

Query: 429 ELGNLEALE 437
              +L  L+
Sbjct: 828 LPSSLRLLD 836



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 444  TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + ++E+P       L  L L+ C + +SLPS +   KSLT+L    C      P+ + ++
Sbjct: 1108 SDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDM 1167

Query: 504  EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL-KLSNNN 561
               + L + GTAI+E+P S+ +L  L++L L+   NL  +PES+  L+SL +L  +S   
Sbjct: 1168 VVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPK 1227

Query: 562  LERIPERLDPLSSLKYL 578
            L ++PE L  L SL+YL
Sbjct: 1228 LNKLPENLGRLQSLEYL 1244



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 15/203 (7%)

Query: 56   LKTL--NILHWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
            LK+L  +I  +++L +L   G S++    + ++++V  +++DL  + +      +   + 
Sbjct: 1133 LKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRG 1192

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP------TSIHSKYLKRLVLR 166
            L+ L+L YC +L     SI  L  L  L +  C  L  LP       S+   Y+K L   
Sbjct: 1193 LQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSM 1252

Query: 167  GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
             C     LP ++      TL L+  G+ E+PS I  LS++  L +    R  +I   I +
Sbjct: 1253 NC----QLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQ 1307

Query: 227  LQFLESIRIHRCPNLQFL-EMPS 248
            L  L    +  C  LQ + E+PS
Sbjct: 1308 LYNLIVFDLSHCQMLQHIPELPS 1330


>gi|168053070|ref|XP_001778961.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669633|gb|EDQ56216.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 176/360 (48%), Gaps = 29/360 (8%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLS 333
           LP+      SL  L +    +   LP+EL NL +L  L + D +++R LP  L  L+ L+
Sbjct: 1   LPNELLNLSSLKRLSLRGYSSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLT 60

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L+L  CS L  + + +  L S++ + +  CSNL         N+  S +E      L L
Sbjct: 61  TLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSN-ELANL--SSLEE-----LNL 112

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
             C  L SLP+ L    SL +L++  C  L  LP+EL NL +L+ L + G + +      
Sbjct: 113 RNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNK 172

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           LA L +L+ L L  CSS  SLP+ L    SL  L + +C +  RLP+E+ NL  L VL +
Sbjct: 173 LANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSSLARLPNELTNLSSLTVLYL 232

Query: 512 KG-TAIREVPESLGQLSSLEWLVLSDNN--LQIIPESLNQLSSLVSLKLSNN-NLERIPE 567
            G  ++  +P  L  LSS+  L   D +  +  +P  L  LSSL  L LS    L  +P 
Sbjct: 233 SGCLSLTSLPNELANLSSVNELYFRDCSSLISFLPNELVNLSSLTRLDLSGYLRLTNLPN 292

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR-LSV-DLRNCLKLD--PNEL 623
            L  LSSL    L             S  TS+P E  +L  LS+ DL  CL+L   PNEL
Sbjct: 293 ELTNLSSLTAPSLSG----------CSSLTSLPKEMANLAILSILDLSGCLRLTSLPNEL 342



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 15/325 (4%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
           EL L+ C    SLP+      SLT+L++  C +   LP++L NL +L RL + G + +  
Sbjct: 37  ELYLRDCSSLRSLPNELANLSSLTTLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTS 96

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           L   L  L+ L +L L+NC  L  + + +  L S+ ++++S CS+L   P     N+  S
Sbjct: 97  LSNELANLSSLEELNLRNCLSLASLPNELANLSSLITLDLSGCSSLVSLPN-ELANL--S 153

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            ++R     L L  CS L S  + L    SLT+L++  C  L  LP+ L NL +LEEL +
Sbjct: 154 SLKR-----LSLRGCSSLTSSSNKLANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNL 208

Query: 442 EG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPD 498
              + +  +P  L  L +L+ L L  C S  SLP+ L    S+  L   DC + +  LP+
Sbjct: 209 SNCSSLARLPNELTNLSSLTVLYLSGCLSLTSLPNELANLSSVNELYFRDCSSLISFLPN 268

Query: 499 EIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLK 556
           E+ NL  L  L + G   +  +P  L  LSSL    LS  ++L  +P+ +  L+ L  L 
Sbjct: 269 ELVNLSSLTRLDLSGYLRLTNLPNELTNLSSLTAPSLSGCSSLTSLPKEMANLAILSILD 328

Query: 557 LSNN-NLERIPERLDPLSSLKYLDL 580
           LS    L  +P  L   SSL  L+L
Sbjct: 329 LSGCLRLTSLPNELGNPSSLIILNL 353



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 178/364 (48%), Gaps = 31/364 (8%)

Query: 80  LWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLE 138
           L +++ NL SLKR+ L+    LT LP+ L+   +L+ L L  CSSL    + +  L+ L 
Sbjct: 1   LPNELLNLSSLKRLSLRGYSSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLT 60

Query: 139 VLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSN-------LKNLPKMTSCHLRSTLPLLG 190
            LDL+ C SLTSLP   ++   LKRL L+GCSN       L NL  +   +LR+ L    
Sbjct: 61  TLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSLEELNLRNCL---- 116

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
             +  LP+ +  LS++  L +  C  L ++ + +  L  L+ + +  C +L        N
Sbjct: 117 -SLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNKLAN 175

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +          + L L  C    SLP+      SL  L + +C +  RLP+EL NL +L 
Sbjct: 176 LSSL-------TTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSSLARLPNELTNLSSLT 228

Query: 311 RLIIDG-TAIRELPEGLGQLALLSKLELKNCSEL-EYISSSIFKLKSVESIEISNCSNLK 368
            L + G  ++  LP  L  L+ +++L  ++CS L  ++ + +  L S+  +++S    L 
Sbjct: 229 VLYLSGCLSLTSLPNELANLSSVNELYFRDCSSLISFLPNELVNLSSLTRLDLSGYLRLT 288

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             P     N+        PS    L+ CS L SLP  +     L+ L++  C +L  LP+
Sbjct: 289 NLPN-ELTNLSS---LTAPS----LSGCSSLTSLPKEMANLAILSILDLSGCLRLTSLPN 340

Query: 429 ELGN 432
           ELGN
Sbjct: 341 ELGN 344



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 146/278 (52%), Gaps = 26/278 (9%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
           L L  CS L SLP+ L    SLT+L++  C  L  LP++L NL +L+ L ++G + +  +
Sbjct: 38  LYLRDCSSLRSLPNELANLSSLTTLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSL 97

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
              LA L +L +L L+ C S  SLP+ L    SL +L++  C + + LP+E+ NL  LK 
Sbjct: 98  SNELANLSSLEELNLRNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKR 157

Query: 509 LTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
           L+++G +++      L  LSSL  L LS  ++L  +P  L  LSSL  L LSN ++L R+
Sbjct: 158 LSLRGCSSLTSSSNKLANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSSLARL 217

Query: 566 PERLDPLSSLKYLDLFE-----------NNLDRIPE-YLR---SFPTSIPSEFTSLR--L 608
           P  L  LSSL  L L              NL  + E Y R   S  + +P+E  +L    
Sbjct: 218 PNELTNLSSLTVLYLSGCLSLTSLPNELANLSSVNELYFRDCSSLISFLPNELVNLSSLT 277

Query: 609 SVDLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITK 644
            +DL   L+L   PNEL+ +        S++G + +T 
Sbjct: 278 RLDLSGYLRLTNLPNELTNL--SSLTAPSLSGCSSLTS 313



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 143/309 (46%), Gaps = 24/309 (7%)

Query: 63  HWENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGY 120
           +  +L +L + G S +T L +D+ NL SLKR+ LK    LT L + L+   +LE L+L  
Sbjct: 55  NLSSLTTLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSLEELNLRN 114

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMT 178
           C SL    + +  L+ L  LDL  C SL SLP  + +   LKRL LRGCS+L +   K+ 
Sbjct: 115 CLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNKLA 174

Query: 179 SCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           +    +TL L G   +  LP+ +  LS++ EL + +C  L  + + +  L  L  + +  
Sbjct: 175 NLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSSLARLPNELTNLSSLTVLYLSG 234

Query: 238 CPNLQFLEMPSCNIDGTRS------------------KEQPSSELKLKKCPRPESLPSGQ 279
           C +L  L     N+                            + L L    R  +LP+  
Sbjct: 235 CLSLTSLPNELANLSSVNELYFRDCSSLISFLPNELVNLSSLTRLDLSGYLRLTNLPNEL 294

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELK 338
               SLT+  +  C +   LP E+ NL  L+ L + G   +  LP  LG  + L  L L 
Sbjct: 295 TNLSSLTAPSLSGCSSLTSLPKEMANLAILSILDLSGCLRLTSLPNELGNPSSLIILNLN 354

Query: 339 NCSELEYIS 347
           +CS L  ++
Sbjct: 355 SCSSLTSLA 363


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 153/297 (51%), Gaps = 21/297 (7%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NIL 62
            E  +N  +FS MT LR+LK         VH  E + +   +LR+  WH +PLKTL +  
Sbjct: 567 GESHLNAKSFSSMTNLRVLKLNN------VHLCEEIEYLSDQLRFLNWHGYPLKTLPSNF 620

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           +  NL+ L++P S +  LW   +++ +LK I+L  S+ L+K PD S+  NLE L L  C 
Sbjct: 621 NPTNLLELELPNSSIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCV 680

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS-CH 181
            L + H S+  L  L  LDL  CK LT++P +I  + LK LVL GCS+L + PK++S  +
Sbjct: 681 ELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNICLESLKILVLSGCSSLTHFPKISSNMN 740

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L    I+ L SSI  L+++  L + +C  L  + S+I  L  L+++ ++ C  L
Sbjct: 741 YLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSKL 800

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
             L     NI      +  S+      C     +      F+ LT LEI++C    R
Sbjct: 801 DSLPESLGNISSLEKLDITST------C-----VNQAPMSFQLLTKLEILNCQGLSR 846



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 183/399 (45%), Gaps = 77/399 (19%)

Query: 222 SSIFKLQFLESIRIHRCPNLQFL--EMPSCNIDGTRSKEQPSS-------ELKLKKCPRP 272
           SS+  L+ L+   +H C  +++L  ++   N  G   K  PS+       EL+L      
Sbjct: 577 SSMTNLRVLKLNNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPNS--- 633

Query: 273 ESLPSGQCMFKSLTSLEIID---------CPNFERLPDELGNLQALNRLIIDG-TAIREL 322
            S+       KS+ +L++I+          P+F  +P+       L RL++ G   + +L
Sbjct: 634 -SIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPN-------LERLVLSGCVELHQL 685

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF------- 375
              LG L  L +L+L+NC +L  I  +I  L+S++ + +S CS+L  FP+I         
Sbjct: 686 HHSLGNLKHLIQLDLRNCKKLTNIPFNIC-LESLKILVLSGCSSLTHFPKISSNMNYLLE 744

Query: 376 CNIDGSGIERIPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
            +++ + I+ + SS        VL L  C+ L  LPS++    SL +L +  C KL+ LP
Sbjct: 745 LHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSKLDSLP 804

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           + LGN+ +LE+L +  T + + P S  QL                         LT LEI
Sbjct: 805 ESLGNISSLEKLDITSTCVNQAPMSF-QL-------------------------LTKLEI 838

Query: 488 IDCKNFMR--LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ--IIP 543
           ++C+   R  L        + +  +     +R V        SL  L LSD NL    +P
Sbjct: 839 LNCQGLSRKFLHSLFPTWNFTRKFSNYSQGLR-VTNWFTFGCSLRILNLSDCNLWDGDLP 897

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
             L+ L+SL  L LS N+  ++PE +  L +L+ L L E
Sbjct: 898 NDLHSLASLQILHLSKNHFTKLPESICHLVNLRDLFLVE 936



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 18/231 (7%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLE-SLPSSLCMF-----KSLTSLEII---DCKK 422
           ++ F N  G  ++ +PS+    N  + LE  LP+S         KS+ +L++I   D + 
Sbjct: 602 QLRFLNWHGYPLKTLPSN---FNPTNLLELELPNSSIHLLWTTSKSMETLKVINLSDSQF 658

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSK 480
           L + PD    +  LE L + G   + ++  SL  L  L +L L+ C    ++P  + + +
Sbjct: 659 LSKTPD-FSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNICL-E 716

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           SL  L +  C +    P    N+ YL  L ++ T+I+ +  S+G L+SL  L L +  NL
Sbjct: 717 SLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNL 776

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             +P ++  L+SL +L L+  + L+ +PE L  +SSL+ LD+    +++ P
Sbjct: 777 LKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGNISSLEKLDITSTCVNQAP 827


>gi|124360568|gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/331 (35%), Positives = 164/331 (49%), Gaps = 25/331 (7%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCM-VHSLEGVPF--TELRYFEWHQFPLKT 58
           SKI  ++ ++  +F  M  LRLL      NKC  VH  EG+ +   +L Y  W  FPL++
Sbjct: 677 SKI-GDVYLSSRSFESMINLRLLHIA---NKCNNVHLQEGLEWLSDKLSYLHWESFPLES 732

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +    + LV L M  SK+ +LWD +Q L +L  I L  S+ L ++PDLS A NL+IL 
Sbjct: 733 LPSTFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILS 792

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L YC SL + H SI    KL  L L  C  + SL T IHSK L  L L  CS+L      
Sbjct: 793 LAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLVQF--C 850

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI-- 235
            +    + L L G  I E  S +   S +  L +  CK+L  +   +   + LES+ I  
Sbjct: 851 VTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLSILN 910

Query: 236 -HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG--QCMFKSLTSLEIID 292
              C  +  L M S  +DG RS E     L L+ C   E+LP     C+   L+ LE+  
Sbjct: 911 LSGCTQINTLSM-SFILDGARSLEF----LYLRNCCNLETLPDNIQNCLM--LSFLELDG 963

Query: 293 CPNFE---RLPDELGNLQALNRLIIDGTAIR 320
           C N     +LP  L +L A+N   +D  +I+
Sbjct: 964 CINLNSLPKLPASLEDLSAINCTYLDTNSIQ 994



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 34/234 (14%)

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           S ++I+ P+  R P    NL+ L+  +    ++ +L   +     L +L LK C+++E +
Sbjct: 773 SEDLIEIPDLSRAP----NLKILS--LAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESL 826

Query: 347 SSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            + I   KS+ ++++++CS+L  F     E+ + ++ G+ I    S +L+ +K       
Sbjct: 827 VTDIHS-KSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSSLMLRNSK------- 878

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGN---LEALEELRVEG-TGIREVPKSL---AQ 455
                    L  L++ DCKKL  +  +L N   LE+L  L + G T I  +  S      
Sbjct: 879 ---------LDYLDLSDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGA 929

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            +L  L L+ C + E+LP  +     L+ LE+  C N   LP    +LE L  +
Sbjct: 930 RSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAI 983



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 48/232 (20%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C+K+ESL + +   KSL +L++ DC  L +        E +  L + GT I E    
Sbjct: 817  LKGCTKIESLVTDI-HSKSLLTLDLTDCSSLVQF---CVTSEEMTWLSLRGTTIHE---- 868

Query: 453  LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK--NFM--RLPDEIGNLEYLKV 508
                            F SL  R   +  L  L++ DCK  NF+  +L ++ G LE L +
Sbjct: 869  ----------------FSSLMLR---NSKLDYLDLSDCKKLNFVGKKLSNDRG-LESLSI 908

Query: 509  LTIKG-TAIREVPES--LGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN----N 560
            L + G T I  +  S  L    SLE+L L +  NL+ +P+++     L  L+L      N
Sbjct: 909  LNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLN 968

Query: 561  NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS------FPTSIPSEFTSL 606
            +L ++P  L+ LS++    L  N++ R  E L++      F    P  F SL
Sbjct: 969  SLPKLPASLEDLSAINCTYLDTNSIQR--EMLKNMLYRFRFGEPFPEYFLSL 1018


>gi|357449443|ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
 gi|355484046|gb|AES65249.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/331 (35%), Positives = 164/331 (49%), Gaps = 25/331 (7%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCM-VHSLEGVPF--TELRYFEWHQFPLKT 58
           SKI  ++ ++  +F  M  LRLL      NKC  VH  EG+ +   +L Y  W  FPL++
Sbjct: 648 SKI-GDVYLSSRSFESMINLRLLHIA---NKCNNVHLQEGLEWLSDKLSYLHWESFPLES 703

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +    + LV L M  SK+ +LWD +Q L +L  I L  S+ L ++PDLS A NL+IL 
Sbjct: 704 LPSTFCPQKLVELSMTHSKLRKLWDRIQKLDNLTIIKLDNSEDLIEIPDLSRAPNLKILS 763

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L YC SL + H SI    KL  L L  C  + SL T IHSK L  L L  CS+L      
Sbjct: 764 LAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLVTDIHSKSLLTLDLTDCSSLVQF--C 821

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI-- 235
            +    + L L G  I E  S +   S +  L +  CK+L  +   +   + LES+ I  
Sbjct: 822 VTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDLSDCKKLNFVGKKLSNDRGLESLSILN 881

Query: 236 -HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG--QCMFKSLTSLEIID 292
              C  +  L M S  +DG RS E     L L+ C   E+LP     C+   L+ LE+  
Sbjct: 882 LSGCTQINTLSM-SFILDGARSLEF----LYLRNCCNLETLPDNIQNCLM--LSFLELDG 934

Query: 293 CPNFE---RLPDELGNLQALNRLIIDGTAIR 320
           C N     +LP  L +L A+N   +D  +I+
Sbjct: 935 CINLNSLPKLPASLEDLSAINCTYLDTNSIQ 965



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 34/234 (14%)

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           S ++I+ P+  R P    NL+ L+  +    ++ +L   +     L +L LK C+++E +
Sbjct: 744 SEDLIEIPDLSRAP----NLKILS--LAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESL 797

Query: 347 SSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            + I   KS+ ++++++CS+L  F     E+ + ++ G+ I    S +L+ +K       
Sbjct: 798 VTDIHS-KSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSSLMLRNSK------- 849

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGN---LEALEELRVEG-TGIREVPKSL---AQ 455
                    L  L++ DCKKL  +  +L N   LE+L  L + G T I  +  S      
Sbjct: 850 ---------LDYLDLSDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGA 900

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            +L  L L+ C + E+LP  +     L+ LE+  C N   LP    +LE L  +
Sbjct: 901 RSLEFLYLRNCCNLETLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAI 954


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 152/297 (51%), Gaps = 21/297 (7%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NIL 62
            E  +N   FS MT LR+LK         VH  E + +   +LR+  WH +PLKTL +  
Sbjct: 567 GESHLNAKAFSSMTNLRVLKLNN------VHLCEEIEYLSDQLRFLNWHGYPLKTLPSNF 620

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           +  NL+ L++P S +  LW   +++ +LK I+L  S+ L+K PD S+  NLE L L  C 
Sbjct: 621 NPTNLLELELPNSSIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCV 680

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS-CH 181
            L + H S+  L  L  LDL  CK LT++P +I  + LK LVL GCS+L + PK++S  +
Sbjct: 681 ELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNICLESLKILVLSGCSSLTHFPKISSNMN 740

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L    I+ L SSI  L+++  L + +C  L  + S+I  L  L+++ ++ C  L
Sbjct: 741 YLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSEL 800

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
             L     NI      +  S+      C     +      F+ LT LEI++C    R
Sbjct: 801 DSLPESLGNISSLEKLDITST------CVNQAPMS-----FQLLTKLEILNCQGLSR 846



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 174/372 (46%), Gaps = 73/372 (19%)

Query: 222 SSIFKLQFLESIRIHRCPNLQFL--EMPSCNIDGTRSKEQPSS-------ELKLKKCPRP 272
           SS+  L+ L+   +H C  +++L  ++   N  G   K  PS+       EL+L      
Sbjct: 577 SSMTNLRVLKLNNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPNS--- 633

Query: 273 ESLPSGQCMFKSLTSLEIID---------CPNFERLPDELGNLQALNRLIIDG-TAIREL 322
            S+       KS+ +L++I+          P+F  +P+       L RL++ G   + +L
Sbjct: 634 -SIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPN-------LERLVLSGCVELHQL 685

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF------- 375
              LG L  L +L+L+NC +L  I  +I  L+S++ + +S CS+L  FP+I         
Sbjct: 686 HHSLGNLKHLIQLDLRNCKKLTNIPFNIC-LESLKILVLSGCSSLTHFPKISSNMNYLLE 744

Query: 376 CNIDGSGIERIPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
            +++ + I+ + SS        VL L  C+ L  LPS++    SL +L +  C +L+ LP
Sbjct: 745 LHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSELDSLP 804

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES------LPSRLYVSK- 480
           + LGN+ +LE+L +  T + + P S  QL L+KL++  C            P+  +  K 
Sbjct: 805 ESLGNISSLEKLDITSTCVNQAPMSF-QL-LTKLEILNCQGLSRKFLHSLFPTWNFTRKF 862

Query: 481 -----------------SLTSLEIIDCKNF-MRLPDEIGNLEYLKVLTIKGTAIREVPES 522
                            SL  L + DC  +   LP+++ +L  L++L +      ++PES
Sbjct: 863 TIYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKNHFTKLPES 922

Query: 523 LGQLSSLEWLVL 534
           +  L +L  L L
Sbjct: 923 ICHLVNLRDLFL 934



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 155/375 (41%), Gaps = 88/375 (23%)

Query: 282 FKSLTSLEIID------CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
           F S+T+L ++       C   E L D+L  L         G  ++ LP       LL +L
Sbjct: 576 FSSMTNLRVLKLNNVHLCEEIEYLSDQLRFLNW------HGYPLKTLPSNFNPTNLL-EL 628

Query: 336 ELKNCS-ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS----- 389
           EL N S  L + +S     KS+E++++ N S+ +   + P  ++    +ER+  S     
Sbjct: 629 ELPNSSIHLLWTTS-----KSMETLKVINLSDSQFLSKTPDFSV-VPNLERLVLSGCVEL 682

Query: 390 --------------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                          L L  C KL ++P ++C+ +SL  L +  C  L   P    N+  
Sbjct: 683 HQLHHSLGNLKHLIQLDLRNCKKLTNIPFNICL-ESLKILVLSGCSSLTHFPKISSNMNY 741

Query: 436 LEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           L EL +E T I+ +  S+  L +L  L LK C++   LPS +    SL +L +  C    
Sbjct: 742 LLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSELD 801

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE------------------------ 530
            LP+ +GN+  L+ L I  T + + P S   L+ LE                        
Sbjct: 802 SLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSRKFLHSLFPTWNFTRK 861

Query: 531 ------------WLV---------LSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPE 567
                       W           LSD NL    +P  L  L+SL  L LS N+  ++PE
Sbjct: 862 FTIYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKNHFTKLPE 921

Query: 568 RLDPLSSLKYLDLFE 582
            +  L +L+ L L E
Sbjct: 922 SICHLVNLRDLFLVE 936



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 18/231 (7%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLE-SLPSSLCMF-----KSLTSLEII---DCKK 422
           ++ F N  G  ++ +PS+    N  + LE  LP+S         KS+ +L++I   D + 
Sbjct: 602 QLRFLNWHGYPLKTLPSN---FNPTNLLELELPNSSIHLLWTTSKSMETLKVINLSDSQF 658

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSK 480
           L + PD    +  LE L + G   + ++  SL  L  L +L L+ C    ++P  + + +
Sbjct: 659 LSKTPD-FSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNICL-E 716

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           SL  L +  C +    P    N+ YL  L ++ T+I+ +  S+G L+SL  L L +  NL
Sbjct: 717 SLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNL 776

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             +P ++  L+SL +L L+  + L+ +PE L  +SSL+ LD+    +++ P
Sbjct: 777 LKLPSTIGSLTSLKTLNLNGCSELDSLPESLGNISSLEKLDITSTCVNQAP 827


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 139/268 (51%), Gaps = 13/268 (4%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +L + EWH +P K+L   L  +
Sbjct: 621 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPENLS-NKLLFLEWHSYPSKSLPAGLQVD 676

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++  +LK I+L  S  LTK PD +   NLE L L  C+SL+
Sbjct: 677 ELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLESLILEGCTSLS 736

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ Y  KL+ ++L  C+S+  LP+++  + LK  +L GCS L+  P +  + +   
Sbjct: 737 EVHPSLGYHKKLQYVNLMDCESVRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNCLM 796

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G GIEEL SSI  L  +  L + +CK L++I SSI  L+ L+ + +  C   +  
Sbjct: 797 VLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFE-- 854

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRP 272
                NI     K +   E      PRP
Sbjct: 855 -----NIPENLGKVESLEEFDGLSNPRP 877



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 158/381 (41%), Gaps = 92/381 (24%)

Query: 410 KSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLA-QLALSKLKLK 464
           KS  +L++I+      L + PD  G +  LE L +EG T + EV  SL     L  + L 
Sbjct: 696 KSAFNLKVINLSNSLHLTKTPDFTG-IPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLM 754

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C S   LPS L + +SL    +  C    + PD +GN+  L VL + GT I E+  S+ 
Sbjct: 755 DCESVRILPSNLEM-ESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIH 813

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-N 583
            L  LE                     ++S+K +  NL+ IP  +  L SLK LDLF  +
Sbjct: 814 HLIGLE---------------------VLSMK-TCKNLKSIPSSIGCLKSLKKLDLFGCS 851

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYIT 643
             + IPE L    +    EF  L            +P       + G+            
Sbjct: 852 EFENIPENLGKVESL--EEFDGLS-----------NP-------RPGF------------ 879

Query: 644 KSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVED 703
             +  PGNEIP WF HQS GS+IS++ P  +     MGF  CV  +             +
Sbjct: 880 -GIAIPGNEIPGWFNHQSMGSSISVQVPSWS-----MGFVACVAFSA------------N 921

Query: 704 DRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE--SDHVFLGSSIFAGENSCKRSD---- 757
               +LF   C  ++ G ++Y S      ++++  SDH++L    F      K       
Sbjct: 922 GESPSLF---CHFKANGRENYPSPMCISCNYIQVLSDHIWLFYLSFDHLKELKEWKHESY 978

Query: 758 ---EFFFHIDRSCCEVKKCGI 775
              E  FH  +   +VK CG+
Sbjct: 979 SNIELSFHSFQPGVKVKNCGV 999



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 17/203 (8%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N +  +L Y   S F LK +    S+ ++   +  G P + 
Sbjct: 667 KSLPAGL-QVDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLE 725

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C  +  LPS+L M +SL    +  C KLE+
Sbjct: 726 SLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLEM-ESLKVCILDGCSKLEK 784

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L  LR++GTGI E+  S+  L  L  L +K C + +S+PS +   KSL  
Sbjct: 785 FPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKK 844

Query: 485 LEIIDCKNFMRLPDEIGNLEYLK 507
           L++  C  F  +P+ +G +E L+
Sbjct: 845 LDLFGCSEFENIPENLGKVESLE 867



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 29/224 (12%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
            SL +   P+F  +P+       L  LI++G T++ E+   LG    L  + L +C  + 
Sbjct: 708 NSLHLTKTPDFTGIPN-------LESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVR 760

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSS-------- 389
            + S++ +++S++   +  CS L+ FP+I           +DG+GIE + SS        
Sbjct: 761 ILPSNL-EMESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLE 819

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           VL +  C  L+S+PSS+   KSL  L++  C + E +P+ LG +E+LEE      G+   
Sbjct: 820 VLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESLEEF----DGLSN- 874

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
           P+    +A+   ++    + +S+ S + V     S+  + C  F
Sbjct: 875 PRPGFGIAIPGNEIPGWFNHQSMGSSISVQVPSWSMGFVACVAF 918



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFL 244
           G+ ++EL       SN+ +L  Y CK     ++ N+S+S   L   ++      PNL+ L
Sbjct: 672 GLQVDELVELHMANSNLDQLW-YGCKSAFNLKVINLSNS---LHLTKTPDFTGIPNLESL 727

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            +  C    + S+  PS         + L  C     LPS   M +SL    +  C   E
Sbjct: 728 ILEGCT---SLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLEM-ESLKVCILDGCSKLE 783

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           + PD +GN+  L  L +DGT I EL   +  L  L  L +K C  L+ I SSI  LKS++
Sbjct: 784 KFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLK 843

Query: 358 SIEISNCSNLKGFPE 372
            +++  CS  +  PE
Sbjct: 844 KLDLFGCSEFENIPE 858


>gi|323452757|gb|EGB08630.1| hypothetical protein AURANDRAFT_821, partial [Aureococcus
           anophagefferens]
          Length = 517

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 220/490 (44%), Gaps = 59/490 (12%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLT--SLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
           C SLT     +     L  L+L  C SLT  +L        L  L LR C +L  LP+  
Sbjct: 1   CPSLTALPERLGDCAALTSLNLHECSSLTTAALERLGDCAALTTLDLRECKSLTALPE-- 58

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
              L     L  + +EE                  C+ L  +   +     L S+ +H C
Sbjct: 59  --RLGDCAALTSLNLEE------------------CRSLTALPERLGDCAALTSLNLHEC 98

Query: 239 PNLQFL--EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS--GQCMFKSLTSLEIIDCP 294
            +L  L   +  C            + L L+ C    ++P   G C   +LT+L +  C 
Sbjct: 99  SSLTALPERLGDC---------AALTTLNLENCMSLTAVPERLGDC--AALTTLNLSGCR 147

Query: 295 N----FERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           N       LP+ LG+  AL  L + D +++  LPE LG  A L+ L L  CS L  +   
Sbjct: 148 NLTALLTALPERLGDCAALTTLDLRDCSSLTALPERLGDCAALTSLNLWCCSSLTALPER 207

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
           +    ++ ++ +  CS+L   PE      D + +     + L L++CS L +LP  L   
Sbjct: 208 LGDCAALTTLHLDRCSSLTALPERLG---DCAAL-----TTLHLDRCSSLTALPERLGDC 259

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLA-QLALSKLKLKKCS 467
            +LT+L +  CK L  LP+ LG+  AL  L + E + +  +P+ L  + AL+ L L++CS
Sbjct: 260 AALTTLHLYGCKSLTALPERLGDCAALTSLDLHECSSLTALPERLGDRAALTTLDLRECS 319

Query: 468 SFESLP-SRLYVSKSLTSLEIIDCKNFMRLP-DEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           S  +    RL    +LTSL++ +C +      + +GN   L  L +  +      E LG 
Sbjct: 320 SLTTAALERLGDCAALTSLDLYECSSLTAAALERLGNCAALTTLNLGRSLTTAALERLGD 379

Query: 526 LSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL-FE 582
            ++L  L L    +L  +P+ L   ++L +L L N ++L  +PERL   ++L  L+L + 
Sbjct: 380 CAALTTLDLRGCLSLTTLPKRLGDCAALTTLYLGNCSSLAALPERLGDCAALTSLNLGYC 439

Query: 583 NNLDRIPEYL 592
            +L  +PE L
Sbjct: 440 ESLTALPERL 449



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 228/500 (45%), Gaps = 61/500 (12%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
            +T L + + +  +L  ++L+  + LT LP+ L     L  L+L  CSSLT     +   
Sbjct: 52  SLTALPERLGDCAALTSLNLEECRSLTALPERLGDCAALTSLNLHECSSLTALPERLGDC 111

Query: 135 NKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNL-----PKMTSCHLRSTLPL 188
             L  L+L+ C SLT++P  +     L  L L GC NL  L      ++  C   +TL L
Sbjct: 112 AALTTLNLENCMSLTAVPERLGDCAALTTLNLSGCRNLTALLTALPERLGDCAALTTLDL 171

Query: 189 LGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL--E 245
                +  LP  +   + +  L ++ C  L  +   +     L ++ + RC +L  L   
Sbjct: 172 RDCSSLTALPERLGDCAALTSLNLWCCSSLTALPERLGDCAALTTLHLDRCSSLTALPER 231

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPS--GQCMFKSLTSLEIIDCPNFERLPDEL 303
           +  C            + L L +C    +LP   G C   +LT+L +  C +   LP+ L
Sbjct: 232 LGDC---------AALTTLHLDRCSSLTALPERLGDC--AALTTLHLYGCKSLTALPERL 280

Query: 304 GNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYIS-SSIFKLKSVESIEI 361
           G+  AL  L + + +++  LPE LG  A L+ L+L+ CS L   +   +    ++ S+++
Sbjct: 281 GDCAALTSLDLHECSSLTALPERLGDRAALTTLDLRECSSLTTAALERLGDCAALTSLDL 340

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             CS+L             + +ER       L  C+ L +L     + +SLT+       
Sbjct: 341 YECSSLTA-----------AALER-------LGNCAALTTLN----LGRSLTT------A 372

Query: 422 KLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
            LERL    G+  AL  L + G   +  +PK L   A L+ L L  CSS  +LP RL   
Sbjct: 373 ALERL----GDCAALTTLDLRGCLSLTTLPKRLGDCAALTTLYLGNCSSLAALPERLGDC 428

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-GTAIREVPESLGQLSSLEWLVLS-DN 537
            +LTSL +  C++   LP+ +G+   L  L +    ++  +PE LG  ++L  L L   +
Sbjct: 429 AALTSLNLGYCESLTALPERLGDCAALTRLDLGYCESLTALPERLGDCAALTRLDLQVCS 488

Query: 538 NLQIIPESLNQLSSLVSLKL 557
           +L  +PE L   ++L SL L
Sbjct: 489 SLTALPERLGDCAALTSLNL 508



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 194/452 (42%), Gaps = 83/452 (18%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLE 114
           L TLN+    NL +L      +T L + + +  +L  +DL+    LT LP+ L     L 
Sbjct: 138 LTTLNLSGCRNLTAL------LTALPERLGDCAALTTLDLRDCSSLTALPERLGDCAALT 191

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKN 173
            L+L  CSSLT     +     L  L LDRC SLT+LP  +     L  L L  CS+L  
Sbjct: 192 SLNLWCCSSLTALPERLGDCAALTTLHLDRCSSLTALPERLGDCAALTTLHLDRCSSLTA 251

Query: 174 LP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           LP ++  C   +TL L                       Y CK L  +   +     L S
Sbjct: 252 LPERLGDCAALTTLHL-----------------------YGCKSLTALPERLGDCAALTS 288

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPS-SELKLKKCPRPESLPS------GQCMFKSL 285
           + +H C +L  L          R  ++ + + L L++C    SL +      G C   +L
Sbjct: 289 LDLHECSSLTALP--------ERLGDRAALTTLDLREC---SSLTTAALERLGDC--AAL 335

Query: 286 TSLEIIDCPNFERLP-DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           TSL++ +C +      + LGN  AL  L +  +      E LG  A L+ L+L+ C  L 
Sbjct: 336 TSLDLYECSSLTAAALERLGNCAALTTLNLGRSLTTAALERLGDCAALTTLDLRGCLSLT 395

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
            +   +    ++ ++ + NCS+L   PE      D + +     + L L  C  L +LP 
Sbjct: 396 TLPKRLGDCAALTTLYLGNCSSLAALPERLG---DCAAL-----TSLNLGYCESLTALPE 447

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
            L    +LT L++  C+ L  LP+ LG+                        AL++L L+
Sbjct: 448 RLGDCAALTRLDLGYCESLTALPERLGDCA----------------------ALTRLDLQ 485

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            CSS  +LP RL    +LTSL + +C++   L
Sbjct: 486 VCSSLTALPERLGDCAALTSLNLEECRSLTAL 517


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 241/505 (47%), Gaps = 56/505 (11%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR-------CPNLQFLEMPS 248
           LP  I  L N+ +L +Y+  +L  I   I  L+ L+ + + R        PN +  ++  
Sbjct: 52  LPKDIGKLQNLQKLNLYNN-QLTTIPKEIGYLKELQELNLSRNQLTTLTLPN-KIGQLQK 109

Query: 249 CNIDGTRSKEQPSSELKLKKCP-------RPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
             +D  + K  P    KL+          + ++LP      K L  L++ D      LP+
Sbjct: 110 LYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDN-QLTTLPN 168

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           E+G LQ L +L + G  ++ LP+ +G+L  L +L+L N ++L+ +   I  LK ++ +++
Sbjct: 169 EIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDL-NDNQLKTLPKEIGYLKELQDLDL 227

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLC 407
            + + L   P        +   ++ G+ ++ +P  + KL          ++L++LP  + 
Sbjct: 228 RD-NQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIG 286

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKC 466
             K L  L + D K L  LP E+G L+ L+ L   G   ++ +PK +  L   +L     
Sbjct: 287 YLKELQVLHLSDNK-LTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSG 345

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
           +  ++LP  +   + L  LE+ D      LP +IG L+ L+VL +    ++ +P+ +GQL
Sbjct: 346 NQLKTLPKDIGQLQKLQDLEL-DSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQL 404

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
             L  L L +N L+ +P+ + QL  L  L LS+N L  +P+ ++ L +L+ L+L  N L 
Sbjct: 405 QKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLK 464

Query: 587 RIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
            +P+ +                T++P +   L+   +L+  L L  N+L+ + KD    Q
Sbjct: 465 TLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQ---NLQE-LYLTNNQLTTLPKDIEKLQ 520

Query: 635 SVNGETYITKSMYFPGNEIPKWFRH 659
           ++  E Y+T +       +PK  R+
Sbjct: 521 NLQ-ELYLTNNQLTT---LPKEIRY 541



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 267/562 (47%), Gaps = 69/562 (12%)

Query: 80  LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEV 139
           L + +QN   ++ +DL  ++L T   D+   QNL+ L+L Y + LT     I YL +L+ 
Sbjct: 29  LTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNL-YNNQLTTIPKEIGYLKELQE 87

Query: 140 LDLDRCKSLT-SLPTSIHSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELP 197
           L+L R +  T +LP  I    L++L L   + LK LPK +        L L    ++ LP
Sbjct: 88  LNLSRNQLTTLTLPNKIGQ--LQKLYLDN-NQLKTLPKEIGKLQNLQELYLTNNQLKTLP 144

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
             I  L  + +L +    +L  + + I KLQ L+ + +     L+ L      +   R  
Sbjct: 145 KEIGYLKELQDLDLRDN-QLTTLPNEIGKLQNLQKLDL-SGNQLKTLPKEIGKLQNLREL 202

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
           +   ++LK        +LP      K L  L++ D      LP+E+G LQ L +L + G 
Sbjct: 203 DLNDNQLK--------TLPKEIGYLKELQDLDLRDN-QLTTLPNEIGKLQNLQKLDLSGN 253

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC------------- 364
            ++ LP+ +G+L  L +L L   ++L+ +   I  LK ++ + +S+              
Sbjct: 254 QLKTLPKEIGKLQNLQELYLY-GNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQ 312

Query: 365 ----------SNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKCSKLE------- 400
                     + LK  P       E+   ++ G+ ++ +P  + +L K   LE       
Sbjct: 313 KLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLK 372

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LS 459
           +LP  +   ++L  L + + + L+ LP ++G L+ L  L +    ++ +PK + QL  L 
Sbjct: 373 TLPKDIGKLQNLQVLNLSNNQ-LKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQ 431

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIR 517
           +L L   +   +LP  +   + L +L++++  N     LP EIG L+ L+VL +    + 
Sbjct: 432 ELNLS-HNKLTTLPKDI---EKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLT 487

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +P+ +G+L +L+ L L++N L  +P+ + +L +L  L L+NN L  +P+ +  L  L+ 
Sbjct: 488 TLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEV 547

Query: 578 LDLFENNLDRIPEYLRSFPTSI 599
           L     +LD IP  LRS    I
Sbjct: 548 L-----HLDDIPA-LRSQEKKI 563



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 184/371 (49%), Gaps = 34/371 (9%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L+ L+  +      L + L N   +  L ++   +  LP+ +G+L  L KL L N ++L 
Sbjct: 15  LSQLKAEETKTHRNLTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYN-NQLT 73

Query: 345 YISSSIFKLKSVESIEIS-NCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNKC--- 396
            I   I  LK ++ + +S N       P    ++    +D + ++ +P  + KL      
Sbjct: 74  TIPKEIGYLKELQELNLSRNQLTTLTLPNKIGQLQKLYLDNNQLKTLPKEIGKLQNLQEL 133

Query: 397 ----SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
               ++L++LP  +   K L  L++ D  +L  LP+E+G L+ L++L + G  ++ +PK 
Sbjct: 134 YLTNNQLKTLPKEIGYLKELQDLDLRDN-QLTTLPNEIGKLQNLQKLDLSGNQLKTLPKE 192

Query: 453 LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           + +L  L +L L   +  ++LP  +   K L  L++ D +    LP+EIG L+ L+ L +
Sbjct: 193 IGKLQNLRELDLND-NQLKTLPKEIGYLKELQDLDLRDNQ-LTTLPNEIGKLQNLQKLDL 250

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            G  ++ +P+ +G+L +L+ L L  N L+ +P+ +  L  L  L LS+N L  +P+ +  
Sbjct: 251 SGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQ 310

Query: 572 LSSLK-YLDLFENNLDRIPE---YLRSFP---------TSIPSEFTSLRLSVDLRNCLKL 618
           L  L+  L L +N L  +P+   YL+             ++P +   L+   D    L+L
Sbjct: 311 LQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQD----LEL 366

Query: 619 DPNELSEIIKD 629
           D N+L  + KD
Sbjct: 367 DSNQLKTLPKD 377



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 217/441 (49%), Gaps = 33/441 (7%)

Query: 56  LKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           LKTL   I + + L  L +  +++T L +++  L +L+++DL  ++L T   ++   QNL
Sbjct: 140 LKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNL 199

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLK 172
             LDL   + L      I YL +L+ LDL R   LT+LP  I   + L++L L G + LK
Sbjct: 200 RELDLN-DNQLKTLPKEIGYLKELQDLDL-RDNQLTTLPNEIGKLQNLQKLDLSG-NQLK 256

Query: 173 NLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            LPK +        L L G  ++ LP  I  L  + ++L  S  +L  +   I +LQ L+
Sbjct: 257 TLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKEL-QVLHLSDNKLTTLPKEIGQLQKLQ 315

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           ++ +H   N Q   +P    D    KE    +L   +    ++LP      + L  LE +
Sbjct: 316 AL-LHLGDN-QLKTLPK---DIGYLKELQLLDLSGNQL---KTLPKDIGQLQKLQDLE-L 366

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    + LP ++G LQ L  L +    ++ LP+ +GQL  L  LEL N ++L+ +   I 
Sbjct: 367 DSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYN-NQLKTLPKEIG 425

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFK 410
           +L+ ++ + +S+ + L   P+          IE++ +  VL L   ++L++LP  +   +
Sbjct: 426 QLQKLQELNLSH-NKLTTLPK---------DIEKLQNLQVLNLT-NNQLKTLPKEIGQLQ 474

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
           +L  L  +   KL  LP ++G L+ L+EL +    +  +PK + +L  L +L L   +  
Sbjct: 475 NLQVLN-LSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNLQELYL-TNNQL 532

Query: 470 ESLPSRLYVSKSLTSLEIIDC 490
            +LP  +   K L  L + D 
Sbjct: 533 TTLPKEIRYLKGLEVLHLDDI 553


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 130/238 (54%), Gaps = 6/238 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +    LR+ EWH +P K+L   L  +
Sbjct: 525 EAQWNMKAFSKMSRLRLLKI---DNMQLSEGPEDLS-NNLRFLEWHSYPSKSLPAGLQVD 580

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V LK I+L  S  L+K PDL+   NLE L L  C+SL+
Sbjct: 581 ELVELHMANSNLEQLWYGCKSAVKLKIINLNNSLYLSKTPDLTGIPNLESLILEGCTSLS 640

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+    KL+ ++L  C+S+  LP+++  + LK   L GCS L+  P +  + +  +
Sbjct: 641 EVHPSLGRHKKLQYVNLVNCRSIRILPSNLEMESLKFFTLDGCSKLEKFPDIVGNMNQLT 700

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
            L L   GI +L SSI  L  +  L + +C+ LE+I SSI  L+ L+ + +  C  LQ
Sbjct: 701 VLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQ 758



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 159/383 (41%), Gaps = 92/383 (24%)

Query: 410 KSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
           KS   L+II+      L + PD L  +  LE L +EG T + EV  SL +   L  + L 
Sbjct: 600 KSAVKLKIINLNNSLYLSKTPD-LTGIPNLESLILEGCTSLSEVHPSLGRHKKLQYVNLV 658

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C S   LPS L + +SL    +  C    + PD +GN+  L VL +  T I ++  S+ 
Sbjct: 659 NCRSIRILPSNLEM-ESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIH 717

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-N 583
            L  LE  VLS NN +                    NLE IP  +  L SLK LDL + +
Sbjct: 718 HLIGLE--VLSMNNCR--------------------NLESIPSSIGCLKSLKKLDLSDCS 755

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYIT 643
            L  IP+ L    +    EF  L            +P       + G+            
Sbjct: 756 ELQNIPQNLGKVESL---EFDGLS-----------NP-------RPGF------------ 782

Query: 644 KSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVED 703
             +  PGNEIP WF HQS GS+IS++ P  +     MGF  CV  +             +
Sbjct: 783 -GIAIPGNEIPGWFNHQSKGSSISVQVPSWS-----MGFVACVAFSA------------N 824

Query: 704 DRKCNLFDVVCDRRSEGYDSYTSSY-LGKISHVESDHVFLGSSIF-------AGENSCKR 755
           D   +LF   C  ++   ++Y S   +    H+ SDH++L    F         +++   
Sbjct: 825 DESPSLF---CHFKANERENYPSPMCISCKGHLFSDHIWLFYLSFDYLKELQEWQHASFS 881

Query: 756 SDEFFFHIDRSCCEVKKCGIHFV 778
           + E  F       +VK CG+ F+
Sbjct: 882 NIELSFQSSEPGVKVKNCGVCFL 904



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 21/174 (12%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS   L+II+  N     + PD L  +  L  LI++G T++ E+   LG+   L  + L 
Sbjct: 600 KSAVKLKIINLNNSLYLSKTPD-LTGIPNLESLILEGCTSLSEVHPSLGRHKKLQYVNLV 658

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSS-- 389
           NC  +  + S++ +++S++   +  CS L+ FP+I          ++D +GI ++ SS  
Sbjct: 659 NCRSIRILPSNL-EMESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIH 717

Query: 390 ------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
                 VL +N C  LES+PSS+   KSL  L++ DC +L+ +P  LG +E+LE
Sbjct: 718 HLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQNLGKVESLE 771



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N +  +L Y   S  KLK +    S+ +S   +L G P + 
Sbjct: 571 KSLPAGL-QVDELVELHMANSNLEQLWYGCKSAVKLKIINLNNSLYLSKTPDLTGIPNLE 629

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C  +  LPS+L M +SL    +  C KLE+
Sbjct: 630 SLILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSIRILPSNLEM-ESLKFFTLDGCSKLEK 688

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L  L ++ TGI ++  S+  L  L  L +  C + ES+PS +   KSL  
Sbjct: 689 FPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKK 748

Query: 485 LEIIDCKNFMRLPDEIGNLEYLK 507
           L++ DC     +P  +G +E L+
Sbjct: 749 LDLSDCSELQNIPQNLGKVESLE 771



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 14/192 (7%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFL 244
           G+ ++EL       SN+ E L Y CK     ++ N+++S++     ++  +   PNL+ L
Sbjct: 576 GLQVDELVELHMANSNL-EQLWYGCKSAVKLKIINLNNSLY---LSKTPDLTGIPNLESL 631

Query: 245 EMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            +  C     +  +  + +    + L  C     LPS   M +SL    +  C   E+ P
Sbjct: 632 ILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSIRILPSNLEM-ESLKFFTLDGCSKLEKFP 690

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           D +GN+  L  L +D T I +L   +  L  L  L + NC  LE I SSI  LKS++ ++
Sbjct: 691 DIVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLD 750

Query: 361 ISNCSNLKGFPE 372
           +S+CS L+  P+
Sbjct: 751 LSDCSELQNIPQ 762


>gi|357513731|ref|XP_003627154.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355521176|gb|AET01630.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1544

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 172/367 (46%), Gaps = 41/367 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVP--FTELRYFEWHQFPLKTL-N 60
           +I +   TF  MT+LR LKF    G K    VH  E +   F +L Y EW+ +PLK+L  
Sbjct: 535 DINVQADTFKLMTKLRFLKFHIPKGKKKLGTVHLPENIMPFFDKLTYLEWNGYPLKSLPE 594

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             H E L+ + +P S +  LW  +Q LV+L+ IDL   K L  LPDLS A  L+ L L  
Sbjct: 595 PFHAEQLIQISLPHSNIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALKLKQLRLSG 654

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C  L E   S    + L+ L LDRC  L SL    H   LK   ++GC +LK     +  
Sbjct: 655 CEELCEVRPSAFSKDTLDTLLLDRCTKLESLMGEKHLTSLKYFSVKGCKSLKEFSLSSDS 714

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
             R  L L   GI+ L  SI  ++N+  L +     L N+   +  L+ L  +R+ +C  
Sbjct: 715 INR--LDLSKTGIKILHPSIGDMNNLIWLNLEDL-NLTNLPIELSHLRSLTELRVSKCNV 771

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           +            T+SK               E+L  G  + + L      DC N   LP
Sbjct: 772 V------------TKSK--------------LEALFEGLTLLRLLHLK---DCCNLIELP 802

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
             + +L++L+ L +DG+++ ELP  +  L+ L    L NCS+L  +        S++  +
Sbjct: 803 ANISSLESLHELRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPL---SIKEFQ 859

Query: 361 ISNCSNL 367
             NC++L
Sbjct: 860 ADNCTSL 866



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 197/477 (41%), Gaps = 99/477 (20%)

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
           P  + KL     PE++      F  LT LE    P  + LP+   + + L ++ +  + I
Sbjct: 557 PKGKKKLGTVHLPENI---MPFFDKLTYLEWNGYP-LKSLPEPF-HAEQLIQISLPHSNI 611

Query: 320 RELPEGLGQLALLSKLELKNCSELEYIS--SSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
             L  G+ +L  L  ++L  C +L ++   S   KLK    + +S C  L        C 
Sbjct: 612 EHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALKLKQ---LRLSGCEEL--------CE 660

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE---IIDCKKLER--------- 425
           +  S   +     L L++C+KLESL       K LTSL+   +  CK L+          
Sbjct: 661 VRPSAFSKDTLDTLLLDRCTKLESLMGE----KHLTSLKYFSVKGCKSLKEFSLSSDSIN 716

Query: 426 -----------LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS--SFES 471
                      L   +G++  L  L +E   +  +P  L+ L +L++L++ KC+  +   
Sbjct: 717 RLDLSKTGIKILHPSIGDMNNLIWLNLEDLNLTNLPIELSHLRSLTELRVSKCNVVTKSK 776

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           L +       L  L + DC N + LP  I +LE L  L + G+++ E+P S+  LS LE 
Sbjct: 777 LEALFEGLTLLRLLHLKDCCNLIELPANISSLESLHELRLDGSSVEELPASIKYLSELEI 836

Query: 532 LVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L + + L+ +PE          L LS    +   +    L ++  L  F  N+    +
Sbjct: 837 QSLDNCSKLRCLPE----------LPLSIKEFQ--ADNCTSLITVSTLKTFSINMIGQKK 884

Query: 591 YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW--MKQSVNGETYITKSMY- 647
           Y+ SF  SI                L+LD   L  I +D    MK +      + K  + 
Sbjct: 885 YI-SFKNSI---------------MLELDGPSLDRITEDAMLTMKSAAFHNVLVRKYRFQ 928

Query: 648 ------------FPGNEIPKWFRHQS-TGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
                        PG  +P+  +HQS T S+I++           +GF F VVV+ S
Sbjct: 929 THSFNYNRAEVCLPGRRVPREIKHQSTTSSSITINISNS------LGFIFAVVVSPS 979


>gi|297836080|ref|XP_002885922.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331762|gb|EFH62181.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 10/216 (4%)

Query: 7   EIQINPYTFSKMTELRLLKFC----GSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL- 59
           E++I+   F KM+ L+ L       G   +   H  E   +   +L++  W ++PL+++ 
Sbjct: 372 ELRIHKKAFKKMSNLKFLNIYTTTFGGNKETRWHLQEDFDYLPPKLKFLSWEKYPLRSMP 431

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    +NLV L+M  S + +LW+ V +L  LK +DL  SK L ++PDLS+  NLE L+LG
Sbjct: 432 SNFQPKNLVKLQMMNSNLEKLWEGVHSLTGLKDMDLWGSKKLKEIPDLSMVTNLETLNLG 491

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            CSSL E  SSI+YLNKL  L++  C +L  LPT ++ K L+ L L GCS LK  P +++
Sbjct: 492 SCSSLVELPSSIKYLNKLIELNMSYCTNLEILPTGLNLKSLQCLYLWGCSQLKTFPDIST 551

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
               S L L    IEE PS++  L N+  L ++S K
Sbjct: 552 N--ISDLNLGESAIEEFPSNLH-LENLDALEMFSMK 584



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 42/260 (16%)

Query: 214 CKRLENISSSI------FKLQFLESIRIHR-----CPNLQFLEMPSCNIDGTRSKEQPSS 262
           C  LEN + S         L  ++ +RIH+       NL+FL + +    G +       
Sbjct: 348 CDVLENKTGSNTVQGIPLNLDEIDELRIHKKAFKKMSNLKFLNIYTTTFGGNKETRWHLQ 407

Query: 263 E-----------LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
           E           L  +K P   S+PS     K+L  L++++  N E+L + + +L  L  
Sbjct: 408 EDFDYLPPKLKFLSWEKYPL-RSMPS-NFQPKNLVKLQMMNS-NLEKLWEGVHSLTGLKD 464

Query: 312 LIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
           + + G+  ++E+P+ L  +  L  L L +CS L  + SSI  L  +  + +S C+NL+  
Sbjct: 465 MDLWGSKKLKEIPD-LSMVTNLETLNLGSCSSLVELPSSIKYLNKLIELNMSYCTNLEIL 523

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           P         +G+       L L  CS+L++ P        L   E      +E  P  L
Sbjct: 524 P---------TGLNLKSLQCLYLWGCSQLKTFPDISTNISDLNLGE----SAIEEFPSNL 570

Query: 431 G--NLEALEELRVEGTGIRE 448
              NL+ALE   ++   + E
Sbjct: 571 HLENLDALEMFSMKNGKLWE 590



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLA 457
           L S+PS+    K+L  L++++   LE+L + + +L  L+++ + G+  ++E+P       
Sbjct: 427 LRSMPSNF-QPKNLVKLQMMNSN-LEKLWEGVHSLTGLKDMDLWGSKKLKEIPDLSMVTN 484

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           L  L L  CSS   LPS +     L  L +  C N   LP  + NL+ L+ L + G + +
Sbjct: 485 LETLNLGSCSSLVELPSSIKYLNKLIELNMSYCTNLEILPTGL-NLKSLQCLYLWGCSQL 543

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLN--QLSSLVSLKLSNNNL-ERI 565
           +  P+    +S L    L ++ ++  P +L+   L +L    + N  L ER+
Sbjct: 544 KTFPDISTNISDLN---LGESAIEEFPSNLHLENLDALEMFSMKNGKLWERV 592


>gi|6449046|gb|AAF08790.1| downy mildew resistance protein RPP5 [Arabidopsis thaliana]
          Length = 1361

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 163/632 (25%), Positives = 265/632 (41%), Gaps = 152/632 (24%)

Query: 10   INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLV 68
            I+  +F  M  L+ L+     +  +  SL   P  +L+   W   PLK L +    E LV
Sbjct: 541  IDEKSFKGMRNLQYLEIGYWSDGVLPQSLVYFP-RKLKRLWWDNCPLKRLPSNFKAEYLV 599

Query: 69   SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN---------------- 112
             L+M  SK+ +LWD  Q L SLK++DL  S  L ++PDLSLA N                
Sbjct: 600  ELRMVNSKLEKLWDGTQPLGSLKKMDLYNSYKLKEIPDLSLAINLEELNLEECESLETLP 659

Query: 113  ------------------------------LEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
                                          LE L +   SS   T   + +  KL+ +  
Sbjct: 660  SSIQNAIKLRELNCWGGLLIDLKSLEGMCNLEYLSVPSWSSRECTQGIVYFPRKLKSVLW 719

Query: 143  DRCKSLTSLPTSIHSKYLKRLV-----------------------LRGCSNLKNLPKMTS 179
              C  L  LP++  ++YL  L+                       LR  +NLK +P ++ 
Sbjct: 720  TNC-PLKRLPSNFKAEYLVELIMEYSELEKLWDGTQSLGSLKEMNLRYSNNLKEIPDLSL 778

Query: 180  CHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                  L L G V +  LPSSI+  + +  L +  C+ LE+  + +F L+ LE + +  C
Sbjct: 779  AINLEELDLFGCVSLVTLPSSIQNATKLIYLDMSECENLESFPT-VFNLKSLEYLDLTGC 837

Query: 239  PNLQ---FLEMPSCNIDGTRSKEQPS--SELKLKKCPRPESLPSG--------QCM---- 281
            PNL+    ++M       +R++  P   +E+ ++ C   ++LP+G        +CM    
Sbjct: 838  PNLRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEF 897

Query: 282  ---------------------FKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG- 316
                                  +SL SLE +D     N + LPD L     L  L + G 
Sbjct: 898  RSEQLTFLNVSGCKLEKLWEGIQSLGSLEEMDLSESENLKELPD-LSKATNLKLLCLSGC 956

Query: 317  TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----E 372
             ++  LP  +G L  L +L +  C+ LE + + +  L S+E++++S CS+L+ FP     
Sbjct: 957  KSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISTN 1015

Query: 373  IPFCNIDGSGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
            I    ++ + IE IP          L LN C  L +LPS++   ++L  L +  C  LE 
Sbjct: 1016 IVCLYLENTAIEEIPDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMNRCTGLEL 1075

Query: 426  LPDELGNLEALEELRVEG---------------------TGIREVPKSLAQLA-LSKLKL 463
            LP ++ NL +LE L + G                     T I EVP  +     L+ L++
Sbjct: 1076 LPTDV-NLSSLETLDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDFTRLTVLRM 1134

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
              C   +++   ++   SLT  +  DC+  ++
Sbjct: 1135 YCCQRLKNISPNIFRLTSLTLADFTDCRGVIK 1166


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 7   EIQINPYTFSKMTELRLLKFC-------GSKNKCMVHSLEGVPF--TELRYFEWHQFPLK 57
           EI      F+ M  LRLLK           + KC VH   G  F   ELR+  W+++PLK
Sbjct: 452 EINFTNEAFAPMNRLRLLKVYTLNFLMDSKREKCKVHFSXGFKFHCEELRHLYWYEYPLK 511

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L N  + +NLV L MP S++ QLW   + L +LK ++LK+SK LT+ PD S   NLE L
Sbjct: 512 SLPNDFNLKNLVDLSMPYSQIKQLWKGTKVLXNLKFMNLKHSKFLTETPDFSRVTNLERL 571

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP 175
            L  C SL + H S+  L KL  L L  CK L SLP+ I   K L+  +L GCS  + LP
Sbjct: 572 VLKGCISLYKVHPSLGDLXKLNFLSLKNCKMLKSLPSCICDLKCLEXFILSGCSKFEELP 631

Query: 176 K-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
           +   +  +       G  I  LPSS   L N+  L    CK
Sbjct: 632 ENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFEXCK 672



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 191/446 (42%), Gaps = 46/446 (10%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP++  NL+ L  L +  + I++L +G   L  L  + LK+ S+    +    ++ ++E 
Sbjct: 513 LPNDF-NLKNLVDLSMPYSQIKQLWKGTKVLXNLKFMNLKH-SKFLTETPDFSRVTNLER 570

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + +  C        I    +  S  +    + L L  C  L+SLPS +C  K L    + 
Sbjct: 571 LVLKGC--------ISLYKVHPSLGDLXKLNFLSLKNCKMLKSLPSCICDLKCLEXFILS 622

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
            C K E LP+  GNLE L+E   +GT IR +P S + L  L  L  + C      PS  +
Sbjct: 623 GCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFEXCKG--PPPSTSW 680

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
                +S    +  NF+  P    +      L+    +     +SLG LSSLE L LS+N
Sbjct: 681 WLPRRSS----NFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLSSLEDLDLSEN 736

Query: 538 NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           N   +P ++ +L  L  L L N   L+ +PE    + S+            +     S  
Sbjct: 737 NFVTLPSNIXRLPHLKMLGLENCKRLQALPELPTSIRSI------------MARNCTSLE 784

Query: 597 TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
           T     F+SL ++V L+  +    N      +DG +  +++   +        G+ IP W
Sbjct: 785 TISNQSFSSLLMTVRLKEHIYCPIN------RDGLLVPALSAVXF--------GSRIPDW 830

Query: 657 FRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDR 716
            R+QS+GS +  + P     +  +G A CVV    +        +   R C LF      
Sbjct: 831 IRYQSSGSEVKAELPPNWFDSNFLGLALCVVTVPRLVSLADFFGLF-WRSCTLFYSTSSH 889

Query: 717 RSEGYDSYTSSYLGKISHVESDHVFL 742
            S  +D YT     K   VESDH++L
Sbjct: 890 XSSSFDVYTYPNHLK-GKVESDHLWL 914


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 165/379 (43%), Gaps = 74/379 (19%)

Query: 7   EIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLK 57
           E+      FS+MT LRLL+         G K +C +H  +   F   ELRY  W ++P +
Sbjct: 502 EMNFTTKAFSQMTNLRLLEIYRSNLRDTGGKMQCKLHISDDFKFHYDELRYLHWDEYPCE 561

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L +    ENLV   MP S +TQLW   +    L+ +D+ YS+ L K PD S A NLE+L
Sbjct: 562 SLPSDFESENLVHFCMPRSHLTQLWKGQKVFGHLEFVDVSYSQYLKKTPDFSRATNLEVL 621

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
            L  C++L + H S+ YL+KL +L+++ C +L  LP+      L+  +L GCS L+ L +
Sbjct: 622 VLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLPSIRWLVSLRTFILSGCSKLEKLQE 681

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           +        +P L         S  CL             L N   +   L  L  +   
Sbjct: 682 VP-----QHMPYL---------SKLCLDGTAITDFSGWSELGNFQENSGNLDCLSEL--- 724

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK-------CPRPESLPSGQCMFKSLTSLE 289
                        N D +  ++Q SS + L+         PR     S  C   SLT L 
Sbjct: 725 -------------NSDDSTIRQQHSSSVVLRNHNASPSSAPRRSRFISPHCTLTSLTYLN 771

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
                                   + GT+I  LP  L +L++L +LEL NC  L+ +   
Sbjct: 772 ------------------------LSGTSIIHLPWNLERLSMLKRLELTNCRRLQALP-- 805

Query: 350 IFKLKSVESIEISNCSNLK 368
                S+E +  SNC++L+
Sbjct: 806 -VLPSSIECMNASNCTSLE 823



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 198/481 (41%), Gaps = 88/481 (18%)

Query: 370  FPEIPFCNIDGSGIERIPSSVLKLNKC------SKLESLPSSLCMFKSLTSLEIIDCKKL 423
            + E+ + + D    E +PS     N        S L  L     +F  L  +++   + L
Sbjct: 547  YDELRYLHWDEYPCESLPSDFESENLVHFCMPRSHLTQLWKGQKVFGHLEFVDVSYSQYL 606

Query: 424  ERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
            ++ PD       LE L ++G T +R+V  SL  L+ L  L ++ C + E LPS  ++  S
Sbjct: 607  KKTPD-FSRATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLPSIRWLV-S 664

Query: 482  LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP---------ESLGQLSSLEWL 532
            L +  +  C    +L +   ++ YL  L + GTAI +           E+ G L  L  L
Sbjct: 665  LRTFILSGCSKLEKLQEVPQHMPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLSEL 724

Query: 533  VLSDNNLQ------IIPESLNQ-----------------LSSLVSLKLSNNNLERIPERL 569
               D+ ++      ++  + N                  L+SL  L LS  ++  +P  L
Sbjct: 725  NSDDSTIRQQHSSSVVLRNHNASPSSAPRRSRFISPHCTLTSLTYLNLSGTSIIHLPWNL 784

Query: 570  DPLSSLKYLDLFENNLDRIPEYLRSFPTSI----PSEFTSLRL----------------- 608
            + LS LK L+L   N  R+ + L   P+SI     S  TSL L                 
Sbjct: 785  ERLSMLKRLEL--TNCRRL-QALPVLPSSIECMNASNCTSLELISPQSVFKRFGGFLFGN 841

Query: 609  SVDLRNC---LKLDPNEL-SEIIKDGWMKQSV--NGETYITKSMYFPGNEIPKWFRHQST 662
               LRNC   ++ D   + S  +   W       +    I  S  FPG+EIP WFRH S 
Sbjct: 842  CFKLRNCHSKMEHDVQSVASHAVPGTWRDTYAIWHPNVAIPFSTVFPGSEIPDWFRHHSQ 901

Query: 663  GSTISLKTPQPTGY--NKLMGFAFCVVVACSVSECCRHESVEDDRKCNL--FDVVCDRRS 718
            G  I+++ P P  Y  +  +GFA   V+A       +H+S      C+L   D+  +  S
Sbjct: 902  GHEINIEVP-PDWYINSNFLGFALSAVMA------PQHDSRAWCMYCDLDTHDLNSNSNS 954

Query: 719  EGYDSYTSSYLGKISH--VESDHVFLGS--SIFAGENSCKRSDEFFFHIDRSCCEVKKCG 774
                S+  S+  ++    +ESDHV+L    S F+         +F F     C  VK CG
Sbjct: 955  HRICSFFGSWTYQLQRTPIESDHVWLAYVPSFFSFSREKWSHIKFSFSSSGGCV-VKSCG 1013

Query: 775  I 775
             
Sbjct: 1014 F 1014


>gi|357513735|ref|XP_003627156.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521178|gb|AET01632.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1473

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 178/378 (47%), Gaps = 48/378 (12%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTE-----LRYFEWHQFPLK 57
           N+++ ++  TF+KM  LR+LKF    N  +C    L    F E     LRYFEW+ +P +
Sbjct: 517 NNDLPLSADTFTKMKALRILKFHAPSNLQRCTNTYLNLPKFLEPFSNKLRYFEWNGYPFE 576

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L    + + LV ++MP S V QLW   + L  L+ IDL   K   KLP+ S A +L+ +
Sbjct: 577 SLPQHFYAKFLVEIRMPHSNVKQLWQGTKELGKLEGIDLSECKQFEKLPNFSKASSLKWV 636

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C SL + H S+   + L  L LDRC  +  +    H  +L+++ + GC +L+    
Sbjct: 637 NLSGCESLVDLHPSVLCADTLVTLILDRCTKVRRVRGEKHLNFLEKISVDGCKSLEEFA- 695

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
             S  L   L L   GI+ L  SI  L  + +L                    LES+R++
Sbjct: 696 -VSSDLIENLDLSSTGIKTLDLSIGRLQKLKQL-------------------NLESLRLN 735

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
           R P     E+ S  +   R  +   S L ++K    E       +F  L SL+I+   +F
Sbjct: 736 RIPK----ELSS--VRSIRELKISGSRLIVEKKQLHE-------LFDGLQSLQILHMKDF 782

Query: 297 ---ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS---SI 350
                LP+ +     L  L +DG+ ++ LP+ + +L  L  L L NC +LE I      I
Sbjct: 783 INQFELPNNVHVASKLMELNLDGSNMKMLPQSIKKLEELEILSLVNCRKLECIPELPPLI 842

Query: 351 FKLKSVESIEISNCSNLK 368
             L +V    + + SNLK
Sbjct: 843 TLLNAVNCTSLVSVSNLK 860



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 119/527 (22%), Positives = 218/527 (41%), Gaps = 83/527 (15%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            FE LP      + L  + +  + +++L +G  +L  L  ++L  C + E + +   K  S
Sbjct: 575  FESLPQHF-YAKFLVEIRMPHSNVKQLWQGTKELGKLEGIDLSECKQFEKLPN-FSKASS 632

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            ++ + +S C +L        C              L L++C+K+  +       K L  L
Sbjct: 633  LKWVNLSGCESLVDLHPSVLC--------ADTLVTLILDRCTKVRRVRGE----KHLNFL 680

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVP------KSLAQLALSKLKLKKCSSF 469
            E I     + L +   + + +E L +  TGI+ +       + L QL L  L+L +    
Sbjct: 681  EKISVDGCKSLEEFAVSSDLIENLDLSSTGIKTLDLSIGRLQKLKQLNLESLRLNR---- 736

Query: 470  ESLPSRLYVSKSLTSLEI------IDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-EVPES 522
              +P  L   +S+  L+I      ++ K    L D    L+ L++L +K    + E+P +
Sbjct: 737  --IPKELSSVRSIRELKISGSRLIVEKKQLHELFD---GLQSLQILHMKDFINQFELPNN 791

Query: 523  LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLF 581
            +   S L  L L  +N++++P+S+ +L  L  L L N   LE IPE L PL +L  L+  
Sbjct: 792  VHVASKLMELNLDGSNMKMLPQSIKKLEELEILSLVNCRKLECIPE-LPPLITL--LNAV 848

Query: 582  ENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD------------ 629
                      L+   T +  +   +  S    N L LD + L  I++             
Sbjct: 849  NCTSLVSVSNLKKLATKMIGKTKHISFS----NSLNLDGHSLGLIMESLNLTMMSAVFHN 904

Query: 630  ---GWMKQSVNGETYITKSMYFPGNEIPKWFR-HQSTGSTISLKTPQPTGYNKLMGFAFC 685
                 ++ +V    Y +      G  IP+ F+   ++ S+I++ T  P   N L+GF + 
Sbjct: 905  VSVRRLRVAVRSYNYNSVDACQLGTSIPRLFQCLTASDSSITI-TLLPDRSN-LLGFIYS 962

Query: 686  VVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLG-KISHVESDHVFLGS 744
            VV++ +     +        +CNL          G +   +++L   ++ + SDHV++  
Sbjct: 963  VVLSPAGGNGMKGGGARIKCQCNL----------GEEGIKATWLNTDVTELNSDHVYVWY 1012

Query: 745  SIFAGENSCKRSD-----EFFFHIDR-----SCCEVKKCGIHFVHAQ 781
              F  ++  K        EF+   D          +K+CG+  V  Q
Sbjct: 1013 DPFHCDSILKFYQPEICFEFYVTNDTGREVDGSVGIKECGVRLVSVQ 1059


>gi|77696199|gb|ABB00834.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKTLN-IL 62
           E+ I+  +F ++  LR LK   S++     VH  E   F   LR   W  +P K+L    
Sbjct: 37  EVVISGKSFKRIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTF 96

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + LV L MP S++ +LW+  Q L  LK+++L  S+ L +LPDLS A NLE +DL YC 
Sbjct: 97  QPQYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSNATNLERMDLSYCE 156

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SS  +L+KLE L+++ C +L  +P  ++   L+ + +RGCS L+N+P M++   
Sbjct: 157 SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNMRGCSRLRNIPVMSTN-- 214

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            + L +    +E +P SI+  S +  L I S  +L+ I+     L+ L+ I
Sbjct: 215 ITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLI 265



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 38/290 (13%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S+LE L         L  + +   + L+ LPD L N   LE + +     + E+P S + 
Sbjct: 109 SQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATNLERMDLSYCESLVEIPSSFSH 167

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ SL ++ +  C     +P    N+  L V     T
Sbjct: 168 LHKLEWLEMNNCINLQVIPAHMNLA-SLETVNMRGCSRLRNIPVMSTNITQLYV---SRT 223

Query: 515 AIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           A+  +P S+   S LE L +S +     +  +P SL QL       L ++++E IPE + 
Sbjct: 224 AVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLD------LIDSDIETIPECIK 277

Query: 571 PLSSLKYLDLFE----NNLDRIPEYLRSFPT----SIPSEFTSL---RLSVDLRNCLKLD 619
            L  L  L+L       +L  +P  LR        S+ + F  L   +  ++  NC KL 
Sbjct: 278 SLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAELNFTNCFKLG 337

Query: 620 PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
                 I++           + +  +   PG E+P  F HQ  G+T++++
Sbjct: 338 QQAQRAIVQ----------RSLLLGTTLLPGRELPAEFDHQGKGNTLTIR 377



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 36/283 (12%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSL 288
           R PNL+FL++     DG      P           L  +  P     P+ Q  +  L  L
Sbjct: 47  RIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTFQPQY--LVEL 104

Query: 289 EIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
             +     E+L +    L  L ++ +     ++ELP+ L     L +++L  C  L  I 
Sbjct: 105 -YMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATNLERMDLSYCESLVEIP 162

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           SS   L  +E +E++NC NL+  P     +++ + +E +      +  CS+L ++P    
Sbjct: 163 SSFSHLHKLEWLEMNNCINLQVIP----AHMNLASLETV-----NMRGCSRLRNIP---V 210

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKL 463
           M  ++T L  +    +E +P  +     LE L +  +    GI  +P SL QL L     
Sbjct: 211 MSTNITQL-YVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLID--- 266

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
              S  E++P  +     L  L +  C+    LP+   +L +L
Sbjct: 267 ---SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFL 306


>gi|15241561|ref|NP_198701.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758062|dbj|BAB08641.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006983|gb|AED94366.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 986

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 153/300 (51%), Gaps = 26/300 (8%)

Query: 6   SEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPFT-ELRYFEWHQFPLKTLNI- 61
            E+ ++   F ++  L+ L+    G   K  V   E + F   LR  +W  +P ++L++ 
Sbjct: 528 GEVFLSERAFKRLCNLQFLRVFKTGYDEKNRVRIPENMEFPPRLRLLQWEAYPRRSLSLK 587

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           L+ E LV L M GS + +LWD  Q L +LK++ L  S  L KLPDLS A NLE LDL  C
Sbjct: 588 LNLEYLVELDMEGSLLEKLWDGTQPLANLKKMSLSSSWYLKKLPDLSNATNLEELDLRAC 647

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            +L E  SS  YL+KL+ L++  C+ L  +P  I+ K L+ + + GCS LK+ P +++  
Sbjct: 648 QNLVELPSSFSYLHKLKYLNMMGCRRLKEVPPHINLKSLELVNMYGCSRLKSFPDISTN- 706

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE--SIRIHRCP 239
             S+L +    +EELP S+   S +  L IY  + L+ ++     L +L+    RI + P
Sbjct: 707 -ISSLDISYTDVEELPESMTMWSRLRTLEIYKSRNLKIVTHVPLNLTYLDLSETRIEKIP 765

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS--GQCMFKSLT---SLEIIDCP 294
           +         N+ G +        L L  C +  SLP   G  ++ S     SLE + CP
Sbjct: 766 D------DIKNVHGLQI-------LFLGGCRKLASLPELPGSLLYLSANECESLESVSCP 812



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 131/312 (41%), Gaps = 42/312 (13%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S LE L        +L  + +     L++LPD L N   LEEL +     + E+P S + 
Sbjct: 601 SLLEKLWDGTQPLANLKKMSLSSSWYLKKLPD-LSNATNLEELDLRACQNLVELPSSFSY 659

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L +  C   + +P  + + KSL  + +  C      PD   N+     L I  T
Sbjct: 660 LHKLKYLNMMGCRRLKEVPPHINL-KSLELVNMYGCSRLKSFPDISTNI---SSLDISYT 715

Query: 515 AIREVPESLGQLSSLEWL-VLSDNNLQIIPE-SLNQLSSLVSLKLSNNNLERIPERLDPL 572
            + E+PES+   S L  L +    NL+I+    LN    L  L LS   +E+IP+ +  +
Sbjct: 716 DVEELPESMTMWSRLRTLEIYKSRNLKIVTHVPLN----LTYLDLSETRIEKIPDDIKNV 771

Query: 573 SSLKYLDLFE-NNLDRIPE------YLRSFP----TSIPSEFTSLRLSVDLRNCLKLDPN 621
             L+ L L     L  +PE      YL +       S+   F +  + +   NC KL+  
Sbjct: 772 HGLQILFLGGCRKLASLPELPGSLLYLSANECESLESVSCPFNTSYMELSFTNCFKLNQE 831

Query: 622 ELSEIIKD----GWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN 677
               II+     GW                 PG E+P    H+STG +I+++    T ++
Sbjct: 832 ARRGIIQQSFSHGWAS--------------LPGRELPTDLYHRSTGHSITVRLEGKTPFS 877

Query: 678 KLMGFAFCVVVA 689
              GF   +V++
Sbjct: 878 AFFGFKVFLVIS 889


>gi|77696201|gb|ABB00835.1| disease resistance protein [Arabidopsis thaliana]
 gi|77696209|gb|ABB00839.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKTLN-IL 62
           E+ I+  +F ++  LR LK   S++     VH  E   F   LR   W  +P K+L    
Sbjct: 37  EVVISGKSFKRIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTF 96

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + LV L MP S++ +LW+  Q L  LK+++L  S+ L +LPDLS A NLE +DL YC 
Sbjct: 97  QPQYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSNATNLERMDLSYCE 156

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SS  +L+KLE L+++ C +L  +P  ++   L+ + +RGCS L+N+P M++   
Sbjct: 157 SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNMRGCSRLRNIPVMSTN-- 214

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            + L +    +E +P SI+  S +  L I S  +L+ I+     L+ L+ I
Sbjct: 215 ITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLI 265



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 38/290 (13%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S+LE L         L  + +   + L+ LPD L N   LE + +     + E+P S + 
Sbjct: 109 SQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATNLERMDLSYCESLVEIPSSFSH 167

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ SL ++ +  C     +P    N+  L V     T
Sbjct: 168 LHKLEWLEMNNCINLQVIPAHMNLA-SLETVNMRGCSRLRNIPVMSTNITQLYV---SRT 223

Query: 515 AIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           A+  +P S+   S LE L +S +     +  +P SL QL       L ++++E IPE + 
Sbjct: 224 AVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLD------LIDSDIETIPECIK 277

Query: 571 PLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL----------RLSVDLRNCLKLD 619
            L  L  L+L     L  +PE   S    +  ++ SL          +  ++  NC KL 
Sbjct: 278 SLHLLYILNLSGCRRLASLPELPSSLRFLMADDYESLETVFCPLNTPKAELNFTNCFKLG 337

Query: 620 PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
                 I++           + +  +   PG E+P  F HQ  G+T++++
Sbjct: 338 QQAQRAIVQ----------RSLLLGTTLLPGREVPAEFDHQGKGNTLTIR 377



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 36/283 (12%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSL 288
           R PNL+FL++     DG      P           L  +  P     P+ Q  +  L  L
Sbjct: 47  RIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTFQPQY--LVEL 104

Query: 289 EIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
             +     E+L +    L  L ++ +     ++ELP+ L     L +++L  C  L  I 
Sbjct: 105 -YMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATNLERMDLSYCESLVEIP 162

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           SS   L  +E +E++NC NL+  P     +++ + +E +      +  CS+L ++P    
Sbjct: 163 SSFSHLHKLEWLEMNNCINLQVIP----AHMNLASLETV-----NMRGCSRLRNIP---V 210

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKL 463
           M  ++T L  +    +E +P  +     LE L +  +    GI  +P SL QL L     
Sbjct: 211 MSTNITQL-YVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLID--- 266

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
              S  E++P  +     L  L +  C+    LP+   +L +L
Sbjct: 267 ---SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFL 306


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 166/373 (44%), Gaps = 61/373 (16%)

Query: 7   EIQINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEGVPF--TELRYFEWHQFPLK 57
           E+      FS+MT LRLL+         G K +C +H  +   F   ELRY  W ++P +
Sbjct: 593 EMNFTTKAFSQMTNLRLLEIYRSNLRDTGGKMQCKLHVSDDFKFHYDELRYLHWDEYPCE 652

Query: 58  TLNI-LHWENLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           +L      ENLV   MP S+ +TQLW   +   +L+ +D+ YS+ L + PD S A NLE+
Sbjct: 653 SLPFDFESENLVHFCMPRSRHLTQLWKGQKVFGNLEFVDVSYSQYLKETPDFSRATNLEV 712

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L L  C++L + H S+ YL+KL +L+L+ C +L  LP+      L+ L+L GCS L+ LP
Sbjct: 713 LVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLPSIRWLVSLETLILSGCSKLEKLP 772

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
           ++        +P L         S  CL             L N   +   L  L  +  
Sbjct: 773 EVP-----QHMPYL---------SKLCLDGTAITDFSGWSELGNFQENSGNLDCLNEL-- 816

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
               +    ++PS ++        PSS  +     RP       C   SLT L       
Sbjct: 817 -NSDDSTIRQLPSSSVVLRNHNASPSSAPRRSHSIRP------HCTLTSLTYLN------ 863

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
                             + GT+I  LP  L +L +L +LEL NC  L+ +        S
Sbjct: 864 ------------------LSGTSIIRLPWNLERLFMLQRLELTNCRRLQALP---VLPSS 902

Query: 356 VESIEISNCSNLK 368
           +E +  SNC++L+
Sbjct: 903 IERMNASNCTSLE 915



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 187/435 (42%), Gaps = 81/435 (18%)

Query: 410  KSLTSLEIIDC---KKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
            K   +LE +D    + L+  PD       LE L ++G T +R+V  SL  L+ L  L L+
Sbjct: 682  KVFGNLEFVDVSYSQYLKETPD-FSRATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNLE 740

Query: 465  KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP---- 520
             C++ E LPS  ++  SL +L +  C    +LP+   ++ YL  L + GTAI +      
Sbjct: 741  NCTNLEHLPSIRWLV-SLETLILSGCSKLEKLPEVPQHMPYLSKLCLDGTAITDFSGWSE 799

Query: 521  -----ESLGQLSSLEWLVLSDNNLQIIPES----LNQ-------------------LSSL 552
                 E+ G L  L  L   D+ ++ +P S     N                    L+SL
Sbjct: 800  LGNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNHNASPSSAPRRSHSIRPHCTLTSL 859

Query: 553  VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI----PSEFTSLRL 608
              L LS  ++ R+P  L+ L  L+ L+L   N  R+ + L   P+SI     S  TSL L
Sbjct: 860  TYLNLSGTSIIRLPWNLERLFMLQRLEL--TNCRRL-QALPVLPSSIERMNASNCTSLEL 916

Query: 609  S-----------------VDLRNC---LKLDPNEL-SEIIKDGWMK--QSVNGETYITKS 645
                                LRNC   ++ D   + S ++   W     S +    I  S
Sbjct: 917  VSPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQSVASHVVPGAWRSTYASWHPNVGIPFS 976

Query: 646  MYFPGNEIPKWFRHQSTGSTISLKTPQPTGY--NKLMGFAFCVVVACSVSECCRHESVED 703
              FPG+EIP WFRH S G  I+++ P P  Y  +  +GFA   V+A       +H+S   
Sbjct: 977  TVFPGSEIPDWFRHHSQGHEINIEVP-PDWYINSNFLGFALSAVMA------PQHDSRAW 1029

Query: 704  DRKCNLFDVVCDRRSEGYDSYTSSYLGKISH--VESDHVFLGSSIFAGENSCKRSDEFFF 761
               C+L     +  S    S+  S+  ++ H  +ESDHV+L         SC++     F
Sbjct: 1030 YMYCDLDTHDLNSNSHRICSFFGSWTYQLQHTPIESDHVWLAYVPSFLSFSCEKWSHIKF 1089

Query: 762  HIDRS-CCEVKKCGI 775
                S  C VK CG 
Sbjct: 1090 SFSSSGGCVVKSCGF 1104


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 146/299 (48%), Gaps = 35/299 (11%)

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C  L SLPS +C FKSL +L    C +LE  PD L ++E+L  L ++GT I+E+P S+ +
Sbjct: 1127 CKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIER 1186

Query: 456  L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-- 512
            L  L    L  C +  +LP  +    SL  L +  C NF +LPD +G L+ L  L++   
Sbjct: 1187 LRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHL 1246

Query: 513  GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
             +   ++P SL  L SL  L+L   N++ IP  +  LSSL  L L+ N+  RIP+ +  L
Sbjct: 1247 DSMNFQLP-SLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQL 1305

Query: 573  SSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
             +L +LDL     L  IPE     P+ +      ++  + ++ C                
Sbjct: 1306 YNLTFLDLSHCKMLQHIPE----LPSGVRRH--KIQRVIFVQGC---------------- 1343

Query: 632  MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVA 689
              +  N  T+I +S     N IP+W  HQ +G  I++K P     N   +G   C ++ 
Sbjct: 1344 --KYRNVTTFIAES-----NGIPEWISHQKSGFKITMKLPWSWYENDDFLGVVLCSLIV 1395



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 39/312 (12%)

Query: 9   QINPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LH 63
           Q+   +F +M  LRLLK    + K  +  H      F+  EL Y  W ++PL++L +  H
Sbjct: 546 QLTTKSFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFH 605

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            +NLV L +  S + QLW   +    L+ IDL YS  L ++PD S   NLEIL L  C+ 
Sbjct: 606 AKNLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCT- 664

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHL 182
                             +  C +L  LP  I+  K+L+ L   GCS L+  P++   ++
Sbjct: 665 ------------------MHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKG-NM 705

Query: 183 RS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           R    L L G  I +LPSSI  L+ +  LL+  C +L  I   I  L  LE + +  C N
Sbjct: 706 RELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHC-N 764

Query: 241 LQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
           +    +PS  C++   +       +L L++     S+P+       L  L +  C N E+
Sbjct: 765 IMEGGIPSDICHLSSLQ-------KLNLER-GHFSSIPTTINQLSRLEVLNLSHCSNLEQ 816

Query: 299 LPDELGNLQALN 310
           +P+    L+ L+
Sbjct: 817 IPELPSRLRLLD 828



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 52/313 (16%)

Query: 249  CNIDGTRSK---------EQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            C  DG R K         E P  E       L L  C    SLPSG C FKSL +L    
Sbjct: 1091 CQCDGARRKRCFGCSDMTEVPIIENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSG 1150

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C   E  PD L ++++L  L +DGTAI+E+P  + +L  L    L NC  L  +  SI  
Sbjct: 1151 CSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICN 1210

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
            L S+  + +  C N +  P+          + R+  S+L+L+    L+S+   L     L
Sbjct: 1211 LTSLRKLRVERCPNFRKLPD---------NLGRL-QSLLQLS-VGHLDSMNFQLPSLSGL 1259

Query: 413  TSLE--IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
             SL   ++    +  +P E+ +L +LE L + G     +P  ++QL  L+ L L  C   
Sbjct: 1260 CSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKML 1319

Query: 470  ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            + +P                      LP  +   +  +V+ ++G   R V   + + + +
Sbjct: 1320 QHIPE---------------------LPSGVRRHKIQRVIFVQGCKYRNVTTFIAESNGI 1358

Query: 530  -EWLVLSDNNLQI 541
             EW+    +  +I
Sbjct: 1359 PEWISHQKSGFKI 1371



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MT 178
            CS +TE    I+   +L+ L L  CK+LTSLP+ I + K L  L   GCS L++ P  + 
Sbjct: 1104 CSDMTEV-PIIENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQ 1162

Query: 179  SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                   L L G  I+E+PSSI+ L  +    + +C  L N+  SI  L  L  +R+ RC
Sbjct: 1163 DMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERC 1222

Query: 239  PNLQFLEMPSCNIDGTRSKEQPS-SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            PN  F ++P  N+   +S  Q S   L       P    SG C  ++L    ++   N  
Sbjct: 1223 PN--FRKLPD-NLGRLQSLLQLSVGHLDSMNFQLPSL--SGLCSLRTL----MLHACNIR 1273

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
             +P E+ +L +L RL + G     +P+G+ QL  L+ L+L +C  L++I
Sbjct: 1274 EIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHI 1322



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 133/304 (43%), Gaps = 57/304 (18%)

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           ++ C  LE LP  +  +K L +L    C KLER P+  GN+  L  L + GT I ++P S
Sbjct: 665 MHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSS 724

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           +  L                         L +L + +C    ++P  I +L  L+VL + 
Sbjct: 725 ITHL-----------------------NGLQTLLLQECAKLHKIPIHICHLSSLEVLDLG 761

Query: 513 GTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
              I E  +P  +  LSSL+ L L   +   IP ++NQLS L  L LS+ +NLE+IPE  
Sbjct: 762 HCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPEL- 820

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
            P S L+ LD   +N            TS  + F  L     L NC           ++D
Sbjct: 821 -P-SRLRLLDAHGSN-----------RTSSRAPFLPLH---SLVNCFSR--------VQD 856

Query: 630 GWMKQSVNGETYITKS--MYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFA-F 684
              + S +   Y  K   ++ PG + IPK    ++       + PQ     N+ +GFA F
Sbjct: 857 S-KRTSFSDSFYHGKGTCIFLPGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAIF 915

Query: 685 CVVV 688
           CV V
Sbjct: 916 CVYV 919



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 61/294 (20%)

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
           +L  L  DR   L SLP + H+K L  L+LR  SN+K L +    H +       + + +
Sbjct: 586 ELTYLHWDR-YPLESLPLNFHAKNLVELLLRN-SNIKQLWRGNKLHDK-------LRVID 636

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           L  S+  +            R+ + SS                PNL+ L +  C + G  
Sbjct: 637 LSYSVHLI------------RIPDFSS---------------VPNLEILTLEGCTMHG-- 667

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                        C   E LP G   +K L +L    C   ER P+  GN++ L  L + 
Sbjct: 668 -------------CVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLS 714

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
           GTAI +LP  +  L  L  L L+ C++L  I   I  L S+E +++ +C+ ++G      
Sbjct: 715 GTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDI 774

Query: 376 CNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           C++         SS+ KLN +     S+P+++     L  L +  C  LE++P+
Sbjct: 775 CHL---------SSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPE 819


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 197/448 (43%), Gaps = 93/448 (20%)

Query: 7   EIQINPYTFSKMTELRLLKF----------CGSKNKCMVHSLEGVPF--TELRYFEWHQF 54
           EI      F+ M +LRLLKF          C SK KC VH      F   ELRY   H +
Sbjct: 536 EIHFTTKAFAGMDKLRLLKFYDYSPSTNSECTSKRKCKVHIPRDFKFHYNELRYLHLHGY 595

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           PL+ L +    +NLV L +  S V QLW  ++ L  LK +DL +SK L + P+ S   NL
Sbjct: 596 PLEQLPHDFSPKNLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNL 655

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLK 172
           E LDL  C+ L E H ++  L KL  L L  CK L ++P SI   K L+  +  GCS ++
Sbjct: 656 EKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVE 715

Query: 173 NLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           N P+   +      L      I  LPSSI             C                 
Sbjct: 716 NFPENFGNLEQLKELYADETAISALPSSI-------------CH---------------- 746

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
            +RI     LQ L    C        + P S   L   PR  S  SG+ +   L+     
Sbjct: 747 -LRI-----LQVLSFNGC--------KGPPSASWLTLLPRKSS-NSGKFLLSPLSG---- 787

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS--SS 349
                      LG+L+ LN   +    I E  + L  LA+LS LE  + S   +IS  SS
Sbjct: 788 -----------LGSLKELN---LRDCNISEGAD-LSHLAILSSLEYLDLSGNNFISLPSS 832

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
           + +L  + S+++ NC  L+   E+P      S I+ I +     + C  LE++ S+  +F
Sbjct: 833 MSQLSQLVSLKLQNCRRLQALSELP------SSIKEIDA-----HNCMSLETI-SNRSLF 880

Query: 410 KSLTSLEIIDCKKLERLPDELGN-LEAL 436
            SL  +   +C K++   + +G+ L+AL
Sbjct: 881 PSLRHVSFGECLKIKTYQNNIGSMLQAL 908



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 233/512 (45%), Gaps = 70/512 (13%)

Query: 297  ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI--SSSIFKLK 354
            E+LP +    + L  L +  + +++L +G+    +L KL+  + S  +Y+  + +   + 
Sbjct: 598  EQLPHDFSP-KNLVDLSLSCSDVKQLWKGI---KVLDKLKFMDLSHSKYLVETPNFSGIS 653

Query: 355  SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            ++E ++++ C+ L+     P   + G        S L L  C  L+++P+S+C  KSL +
Sbjct: 654  NLEKLDLTGCTYLREVH--PTLGVLGK------LSFLSLRDCKMLKNIPNSICKLKSLET 705

Query: 415  LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
                 C K+E  P+  GNLE L+EL  + T I  +P S+  L  L  L    C   +  P
Sbjct: 706  FIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGC---KGPP 762

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE--SLGQLSSLEW 531
            S  ++  +L   +  +   F+  P  +  L  LK L ++   I E  +   L  LSSLE+
Sbjct: 763  SASWL--TLLPRKSSNSGKFLLSP--LSGLGSLKELNLRDCNISEGADLSHLAILSSLEY 818

Query: 532  LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
            L LS NN   +P S++QLS LVSLKL   N  R+    +  SS+K +D     +L+ I  
Sbjct: 819  LDLSGNNFISLPSSMSQLSQLVSLKL--QNCRRLQALSELPSSIKEIDAHNCMSLETI-- 874

Query: 591  YLRSFPTSIPSEFTSLRLSVDLRNCLKLDP--NELSEIIKD-GWMKQSVNGETY------ 641
                   S  S F SLR  V    CLK+    N +  +++      Q+     Y      
Sbjct: 875  -------SNRSLFPSLR-HVSFGECLKIKTYQNNIGSMLQALATFLQTHKRSRYARDNPE 926

Query: 642  ---ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCR 697
               I  S   PG+EIP WF +QS+G+ ++++ P P  +N   +GFA   V          
Sbjct: 927  SVTIEFSTVVPGSEIPDWFSYQSSGNVVNIELP-PNWFNSNFLGFALSAVFG-------- 977

Query: 698  HESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH-------VESDHVFLGSSIFAGE 750
             + + D    +   V C      + +  +SY   + H       +ESDH++LG +     
Sbjct: 978  FDPLPDYNPNH--KVFCLFCIFSFQNSAASYRDNVFHYNSGPALIESDHLWLGYAPVVSS 1035

Query: 751  NSCKRSDEF--FFHIDRSCCEVKKCGIHFVHA 780
                  + F   F I      VK+CGIH V++
Sbjct: 1036 FKWHEVNHFKAAFQIYGRHFVVKRCGIHLVYS 1067


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 146/299 (48%), Gaps = 35/299 (11%)

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C  L SLPS +C FKSL +L    C +LE  PD L ++E+L  L ++GT I+E+P S+ +
Sbjct: 1113 CKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIER 1172

Query: 456  L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-- 512
            L  L    L  C +  +LP  +    SL  L +  C NF +LPD +G L+ L  L++   
Sbjct: 1173 LRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHL 1232

Query: 513  GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
             +   ++P SL  L SL  L+L   N++ IP  +  LSSL  L L+ N+  RIP+ +  L
Sbjct: 1233 DSMNFQLP-SLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQL 1291

Query: 573  SSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
             +L +LDL     L  IPE     P+ +      ++  + ++ C                
Sbjct: 1292 YNLTFLDLSHCKMLQHIPE----LPSGVRRH--KIQRVIFVQGC---------------- 1329

Query: 632  MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVA 689
              +  N  T+I +S     N IP+W  HQ +G  I++K P     N   +G   C ++ 
Sbjct: 1330 --KYRNVTTFIAES-----NGIPEWISHQKSGFKITMKLPWSWYENDDFLGVVLCSLIV 1381



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 39/312 (12%)

Query: 9   QINPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LH 63
           Q+   +F +M  LRLLK    + K  +  H      F+  EL Y  W ++PL++L +  H
Sbjct: 532 QLTTKSFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFH 591

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            +NLV L +  S + QLW   +    L+ IDL YS  L ++PD S   NLEIL L  C+ 
Sbjct: 592 AKNLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCT- 650

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHL 182
                             +  C +L  LP  I+  K+L+ L   GCS L+  P++   ++
Sbjct: 651 ------------------MHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKG-NM 691

Query: 183 RS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           R    L L G  I +LPSSI  L+ +  LL+  C +L  I   I  L  LE + +  C N
Sbjct: 692 RELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHC-N 750

Query: 241 LQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
           +    +PS  C++   +       +L L++     S+P+       L  L +  C N E+
Sbjct: 751 IMEGGIPSDICHLSSLQ-------KLNLER-GHFSSIPTTINQLSRLEVLNLSHCSNLEQ 802

Query: 299 LPDELGNLQALN 310
           +P+    L+ L+
Sbjct: 803 IPELPSRLRLLD 814



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 52/313 (16%)

Query: 249  CNIDGTRSK---------EQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            C  DG R K         E P  E       L L  C    SLPSG C FKSL +L    
Sbjct: 1077 CQCDGARRKRCFGCSDMTEVPIIENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSG 1136

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C   E  PD L ++++L  L +DGTAI+E+P  + +L  L    L NC  L  +  SI  
Sbjct: 1137 CSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICN 1196

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
            L S+  + +  C N +  P+          + R+  S+L+L+    L+S+   L     L
Sbjct: 1197 LTSLRKLRVERCPNFRKLPD---------NLGRL-QSLLQLS-VGHLDSMNFQLPSLSGL 1245

Query: 413  TSLE--IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
             SL   ++    +  +P E+ +L +LE L + G     +P  ++QL  L+ L L  C   
Sbjct: 1246 CSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKML 1305

Query: 470  ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            + +P                      LP  +   +  +V+ ++G   R V   + + + +
Sbjct: 1306 QHIPE---------------------LPSGVRRHKIQRVIFVQGCKYRNVTTFIAESNGI 1344

Query: 530  -EWLVLSDNNLQI 541
             EW+    +  +I
Sbjct: 1345 PEWISHQKSGFKI 1357



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 121  CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MT 178
            CS +TE    I+   +L+ L L  CK+LTSLP+ I + K L  L   GCS L++ P  + 
Sbjct: 1090 CSDMTEV-PIIENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQ 1148

Query: 179  SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                   L L G  I+E+PSSI+ L  +    + +C  L N+  SI  L  L  +R+ RC
Sbjct: 1149 DMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERC 1208

Query: 239  PNLQFLEMPSCNIDGTRSKEQPS-SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            PN  F ++P  N+   +S  Q S   L       P    SG C  ++L    ++   N  
Sbjct: 1209 PN--FRKLPD-NLGRLQSLLQLSVGHLDSMNFQLPSL--SGLCSLRTL----MLHACNIR 1259

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
             +P E+ +L +L RL + G     +P+G+ QL  L+ L+L +C  L++I
Sbjct: 1260 EIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHI 1308



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 132/304 (43%), Gaps = 57/304 (18%)

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           ++ C  LE LP  +  +K L +L    C KLER P+  GN+  L  L + GT I ++P S
Sbjct: 651 MHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSS 710

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           +  L                         L +L + +C    ++P  I +L  L+VL + 
Sbjct: 711 ITHL-----------------------NGLQTLLLQECAKLHKIPIHICHLSSLEVLDLG 747

Query: 513 GTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
              I E  +P  +  LSSL+ L L   +   IP ++NQLS L  L LS+ +NLE+IPE  
Sbjct: 748 HCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPEL- 806

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
              S L+ LD   +N            TS  + F  L     L NC           ++D
Sbjct: 807 --PSRLRLLDAHGSN-----------RTSSRAPFLPLH---SLVNCFSR--------VQD 842

Query: 630 GWMKQSVNGETYITKS--MYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFA-F 684
              + S +   Y  K   ++ PG + IPK    ++       + PQ     N+ +GFA F
Sbjct: 843 S-KRTSFSDSFYHGKGTCIFLPGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAIF 901

Query: 685 CVVV 688
           CV V
Sbjct: 902 CVYV 905



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 61/294 (20%)

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
           +L  L  DR   L SLP + H+K L  L+LR  SN+K L +    H +       + + +
Sbjct: 572 ELTYLHWDR-YPLESLPLNFHAKNLVELLLRN-SNIKQLWRGNKLHDK-------LRVID 622

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           L  S+  +            R+ + SS                PNL+ L +  C + G  
Sbjct: 623 LSYSVHLI------------RIPDFSS---------------VPNLEILTLEGCTMHG-- 653

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                        C   E LP G   +K L +L    C   ER P+  GN++ L  L + 
Sbjct: 654 -------------CVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLS 700

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
           GTAI +LP  +  L  L  L L+ C++L  I   I  L S+E +++ +C+ ++G      
Sbjct: 701 GTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDI 760

Query: 376 CNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           C++         SS+ KLN +     S+P+++     L  L +  C  LE++P+
Sbjct: 761 CHL---------SSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIPE 805


>gi|109676360|gb|ABG37662.1| NBS-LRR type disease resistance-like protein [Populus trichocarpa]
          Length = 1138

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 137/268 (51%), Gaps = 13/268 (4%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EWH +P K+L   L  +
Sbjct: 185 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPEDLS-KELRFLEWHSYPSKSLPAGLQVD 240

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L+K PDL+   NL  L L  C+SL+
Sbjct: 241 GLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLS 300

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+     L+ ++L  CKS   LP+++  + LK   L GC+ L+  P +  + +   
Sbjct: 301 EVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLM 360

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G GI EL SSI  L  +  L + +CK LE+I SSI  L+ L+ + +  C  L+  
Sbjct: 361 ELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK-- 418

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRP 272
                NI     K +   E      PRP
Sbjct: 419 -----NIPENLGKVESLEEFDGLSNPRP 441



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N S  +L Y   S   LK +    S+ +S   +L G P + 
Sbjct: 231 KSLPAGL-QVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLS 289

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C     LPS+L M +SL    +  C KLE+
Sbjct: 290 SLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEM-ESLKVFTLDGCTKLEK 348

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L EL ++GTGI E+  S+  L  L  L +  C + ES+PS +   KSL  
Sbjct: 349 FPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKK 408

Query: 485 LEIIDCKNFMRLPDEIGNLEYLK 507
           L++  C     +P+ +G +E L+
Sbjct: 409 LDLSGCSELKNIPENLGKVESLE 431



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 23/177 (12%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L++I+  N     + PD L  +  L+ LI++G T++ E+   LG+   L  + L 
Sbjct: 260 KSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLV 318

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIERIPSS- 389
           NC     + S++ +++S++   +  C+ L+ FP+I          C +DG+GI  + SS 
Sbjct: 319 NCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVGNMNCLMELC-LDGTGIAELSSSI 376

Query: 390 -------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                  VL +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE 
Sbjct: 377 HHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEF 433



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 13/207 (6%)

Query: 410 KSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
           KS  +L++I+      L + PD L  +  L  L +EG T + EV  SL +   L  + L 
Sbjct: 260 KSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLV 318

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C SF  LPS L + +SL    +  C    + PD +GN+  L  L + GT I E+  S+ 
Sbjct: 319 NCKSFRILPSNLEM-ESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIH 377

Query: 525 QLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
            L  LE L +++  NL+ IP S+  L SL  L LS  + L+ IPE L  + SL+  D   
Sbjct: 378 HLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDGLS 437

Query: 583 NNLDRIPEYLRSFPTS-IPSEFTSLRL 608
           N     P +  +FP + IP  F   +L
Sbjct: 438 NPR---PGFGIAFPGNEIPGWFNHRKL 461



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 13/174 (7%)

Query: 208 ELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN----IDGTRSKE 258
           E L Y CK     ++ N+S+S   L   ++  +   PNL  L +  C     +  +  + 
Sbjct: 253 EQLWYGCKSAVNLKVINLSNS---LNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRH 309

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
           +    + L  C     LPS   M +SL    +  C   E+ PD +GN+  L  L +DGT 
Sbjct: 310 KNLQYVNLVNCKSFRILPSNLEM-ESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTG 368

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           I EL   +  L  L  L + NC  LE I SSI  LKS++ +++S CS LK  PE
Sbjct: 369 IAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPE 422



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 37/206 (17%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           LS L L+ C+S   +   L   K+L  + +++CK+F  LP  +  +E LKV T+ G T +
Sbjct: 288 LSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKL 346

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
            + P+ +G ++ L  L L    +  +  S++ L  L  L ++N  NLE IP  +  L SL
Sbjct: 347 EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSL 406

Query: 576 KYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
           K LDL   + L  IPE L    +    EF  L            +P       + G+   
Sbjct: 407 KKLDLSGCSELKNIPENLGKVESL--EEFDGLS-----------NP-------RPGF--- 443

Query: 635 SVNGETYITKSMYFPGNEIPKWFRHQ 660
                      + FPGNEIP WF H+
Sbjct: 444 ----------GIAFPGNEIPGWFNHR 459


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 26/338 (7%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKN-----KCMVHSLEGVPFTELRYFEWHQFPLKTL 59
            +E+ I P  F KM  L+LL+F  + +       M+  LE +P   LRY  W  + LK+L
Sbjct: 594 GNELSITPGIFKKMPNLKLLEFYTNSSVEESRTRMLDGLEYLP--TLRYLHWDAYHLKSL 651

Query: 60  NILHWEN-LVSLKMPGSKVTQLWDDVQ-NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
                 + LV L +  S +  +W   Q +L +L+ ++L   K L + PDLS A NLE L 
Sbjct: 652 PPQFCTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISCKHLNEFPDLSKATNLESLK 711

Query: 118 LGYCSSLTET-HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           L  C +L E   SS++ LNKL    L  CK+L SLP +I+ K L+ L L GCS+L+  P 
Sbjct: 712 LSNCDNLVEIPDSSLRQLNKLVHFKLSNCKNLKSLPNNINLKSLRSLHLNGCSSLEEFPF 771

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           ++       L L    I+++P SI+ L+ + ++ +  CKRL N+   I  L+FL  + + 
Sbjct: 772 ISET--VEKLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLA 829

Query: 237 RCPN-LQFLEMPSC----NIDGTRSKEQP-----SSELK---LKKCPRPESLPSGQCMFK 283
            CPN + F E+       N++ T  +E P      SEL+   +  C +  +LP       
Sbjct: 830 NCPNVISFPELGRSIRWLNLNKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLG 889

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
            L  L +  C N    P+  G  + +  L + GT+I E
Sbjct: 890 QLKYLNLRGCVNVTESPNLAGG-KTMKALDLHGTSITE 926



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 51/353 (14%)

Query: 112 NLEILDLGYCSSLTETHS----SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
           NL++L+    SS+ E+ +     ++YL  L  L  D    L SLP    + +L  L L  
Sbjct: 609 NLKLLEFYTNSSVEESRTRMLDGLEYLPTLRYLHWD-AYHLKSLPPQFCTSFLVELNLS- 666

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
                           S++  +  G      S + L N+  L + SCK L N    + K 
Sbjct: 667 ---------------HSSIQTVWSG------SQQDLGNLRSLNLISCKHL-NEFPDLSKA 704

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
             LES+++  C NL  +E+P    D +  +       KL  C   +SLP+     KSL S
Sbjct: 705 TNLESLKLSNCDNL--VEIP----DSSLRQLNKLVHFKLSNCKNLKSLPN-NINLKSLRS 757

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L +  C + E  P      + + +L+++ T+I+++P  + +L  L  + L  C  L  + 
Sbjct: 758 LHLNGCSSLEEFP---FISETVEKLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLP 814

Query: 348 SSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV--------LKLNK 395
             I  LK +  + ++NC N+  FPE    I + N++ +GI+ +P ++        L ++ 
Sbjct: 815 ECIKNLKFLNDLGLANCPNVISFPELGRSIRWLNLNKTGIQEVPLTIGDKSELRYLNMSG 874

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
           C KL +LP ++     L  L +  C  +   P+  G  + ++ L + GT I E
Sbjct: 875 CDKLMTLPPTVKKLGQLKYLNLRGCVNVTESPNLAGG-KTMKALDLHGTSITE 926



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 21/287 (7%)

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           R+ D L  L  L  L  D   ++ LP      + L +L L + S     S S   L ++ 
Sbjct: 627 RMLDGLEYLPTLRYLHWDAYHLKSLPPQFCT-SFLVELNLSHSSIQTVWSGSQQDLGNLR 685

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP-SSLCMFKSLTSLE 416
           S+ + +C +L  FP++       + +E      LKL+ C  L  +P SSL     L   +
Sbjct: 686 SLNLISCKHLNEFPDLS----KATNLES-----LKLSNCDNLVEIPDSSLRQLNKLVHFK 736

Query: 417 IIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
           + +CK L+ LP+ + NL++L  L + G + + E P       + KL L + +S + +P  
Sbjct: 737 LSNCKNLKSLPNNI-NLKSLRSLHLNGCSSLEEFP--FISETVEKLLLNE-TSIQQVPPS 792

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVL 534
           +     L  + +  CK  M LP+ I NL++L  L +     +   PE LG+  S+ WL L
Sbjct: 793 IERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPE-LGR--SIRWLNL 849

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           +   +Q +P ++   S L  L +S  + L  +P  +  L  LKYL+L
Sbjct: 850 NKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLGQLKYLNL 896


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 155/305 (50%), Gaps = 29/305 (9%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L SLPSS+  FKSL +L    C +LE  P+ L ++E+L +L ++GT I+E+P S
Sbjct: 1047 LRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTIKEIPSS 1106

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            ++ L  L  L L +C +  +LP  +    SL +L +  C NF + PD +G L  LK L I
Sbjct: 1107 ISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNLGRLRSLKSLFI 1166

Query: 512  K--GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
                +   ++P SL  L SL+ L+L   NL+ IP  +  LSSLV L L  N+  RIP+ +
Sbjct: 1167 SHLDSMDFQLP-SLSGLCSLKLLMLHACNLREIPSGIYYLSSLVLLYLGRNHFSRIPDGI 1225

Query: 570  DPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
              L +LK LDL     L  IPE     P+S+        + +D+ NC  L+   LS    
Sbjct: 1226 SQLYNLKLLDLSHCKMLQHIPE----LPSSL--------MYLDVHNCTSLE--NLSSQSN 1271

Query: 629  DGW------MKQSVNGETY-ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLM 680
              W       K  + G  + + ++  F    IP+W  HQ +G  I++K P     N   +
Sbjct: 1272 LLWSSLFKCFKSQIQGREFGLVRT--FIAESIPEWISHQKSGFKITMKLPWSWYENDDFL 1329

Query: 681  GFAFC 685
            GF  C
Sbjct: 1330 GFVLC 1334



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 131/253 (51%), Gaps = 23/253 (9%)

Query: 9   QINPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LH 63
           Q+   +F +M  LRLLK    + K  +  H      F+  EL Y  W  +PL++L +  H
Sbjct: 540 QLTTESFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDGYPLESLPMNFH 599

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            +NLV L +  S + QLW   +    L+ IDL YS  L ++PD S   NLEIL      +
Sbjct: 600 AKNLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEIL------T 653

Query: 124 LTETHSSIQ-YLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCH 181
           L E    I+  + +L VLDL    ++  LP+SI H   L+ L+L  CS L  +P    CH
Sbjct: 654 LEERFPEIKGNMRELRVLDLS-GTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHI-CH 711

Query: 182 LRSTLPLLGVG---IEE--LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           L S+L +L +G   I E  +PS I  LS++ +L +       +I ++I +L  LE + + 
Sbjct: 712 L-SSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFGSIPTTINQLSRLEILNLS 769

Query: 237 RCPNL-QFLEMPS 248
            C NL Q  E+PS
Sbjct: 770 HCSNLEQIPELPS 782



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 32/243 (13%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C    SLPS    FKSL +L    C   E  P+ L ++++L +L +DGT I+E+P  
Sbjct: 1047 LRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTIKEIPSS 1106

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            +  L  L  L L  C  L  +  SI  L S++++ +  C N   FP+             
Sbjct: 1107 ISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPD------------- 1153

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
                               +L   +SL SL I     ++     L  L +L+ L +    
Sbjct: 1154 -------------------NLGRLRSLKSLFISHLDSMDFQLPSLSGLCSLKLLMLHACN 1194

Query: 446  IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
            +RE+P  +  L+   L     + F  +P  +    +L  L++  CK    +P+   +L Y
Sbjct: 1195 LREIPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPELPSSLMY 1254

Query: 506  LKV 508
            L V
Sbjct: 1255 LDV 1257



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 53/275 (19%)

Query: 136  KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  CK+LTSLP+SI   K L  L   GCS L++ P+ +        L L G  I
Sbjct: 1041 ELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTI 1100

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI  L  +  L +Y CK L N+  SI  L  L+++ + RCPN             
Sbjct: 1101 KEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFN----------- 1149

Query: 254  TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI--IDCPNFERLPDELGNLQALNR 311
                                  P      +SL SL I  +D  +F+ LP  L  L +L  
Sbjct: 1150 --------------------KFPDNLGRLRSLKSLFISHLDSMDFQ-LP-SLSGLCSLKL 1187

Query: 312  LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            L++    +RE+P G+  L+ L  L L   +    I   I +L +++ +++S+C  L+  P
Sbjct: 1188 LMLHACNLREIPSGIYYLSSLVLLYLGR-NHFSRIPDGISQLYNLKLLDLSHCKMLQHIP 1246

Query: 372  EIPFCNIDGSGIERIPSSVLKLN--KCSKLESLPS 404
            E             +PSS++ L+   C+ LE+L S
Sbjct: 1247 E-------------LPSSLMYLDVHNCTSLENLSS 1268



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 125/287 (43%), Gaps = 60/287 (20%)

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS 467
           F S+ +LEI+  +  ER P+  GN+  L  L + GT I ++P S+  L  L  L L++CS
Sbjct: 643 FSSVPNLEILTLE--ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECS 700

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQ 525
               +PS                         I +L  LKVL +    I E  +P  +  
Sbjct: 701 KLHKIPS------------------------HICHLSSLKVLDLGHCNIMEGGIPSDICH 736

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENN 584
           LSSL+ L L   +   IP ++NQLS L  L LS+ +NLE+IPE   P S L+ LD   +N
Sbjct: 737 LSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNLEQIPEL--P-SRLRLLDAHGSN 793

Query: 585 LDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK 644
             RI       P               L NC        + ++K      S +  +Y  K
Sbjct: 794 --RISSRAPFLPLH------------SLVNCFS-----WARVLK----STSFSDSSYHGK 830

Query: 645 S--MYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFAFCVV 687
              +  PG+  IP+W  H      IS + PQ     N+ +GFA C V
Sbjct: 831 GTCIVLPGSAGIPEWIMHWRNRCFISTELPQNWHQNNEFLGFAICCV 877



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 12/148 (8%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
           F S+ +LEI+     ER P+  GN++ L  L + GTAI +LP  +  L  L  L L+ CS
Sbjct: 643 FSSVPNLEILTLE--ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECS 700

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLE 400
           +L  I S I  L S++ +++ +C+ ++G      C++         SS+ KLN +     
Sbjct: 701 KLHKIPSHICHLSSLKVLDLGHCNIMEGGIPSDICHL---------SSLQKLNLERGHFG 751

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           S+P+++     L  L +  C  LE++P+
Sbjct: 752 SIPTTINQLSRLEILNLSHCSNLEQIPE 779



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 20/203 (9%)

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           L SLP + H+K L  L+LR  SN+K L +    H +  +  L   +  +   I   S++ 
Sbjct: 591 LESLPMNFHAKNLVELLLRN-SNIKQLWRGNKLHDKLRVIDLSYSVHLI--RIPDFSSVP 647

Query: 208 ELLIYSCK-RLENISSSIFKLQFLESIRIHRCPNLQFLEMPS--CNIDGTRSKEQPSSEL 264
            L I + + R   I  ++ +L+ L+            +++PS   +++G ++       L
Sbjct: 648 NLEILTLEERFPEIKGNMRELRVLD------LSGTAIMDLPSSITHLNGLQT-------L 694

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELP 323
            L++C +   +PS  C   SL  L++  C   E  +P ++ +L +L +L ++      +P
Sbjct: 695 LLEECSKLHKIPSHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFGSIP 754

Query: 324 EGLGQLALLSKLELKNCSELEYI 346
             + QL+ L  L L +CS LE I
Sbjct: 755 TTINQLSRLEILNLSHCSNLEQI 777



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 5/112 (4%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE- 448
           VL L+  + ++ LPSS+     L +L + +C KL ++P  + +L +L+ L +    I E 
Sbjct: 670 VLDLSGTAIMD-LPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSLKVLDLGHCNIMEG 728

Query: 449 -VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            +P  +  L +L KL L++   F S+P+ +     L  L +  C N  ++P+
Sbjct: 729 GIPSDICHLSSLQKLNLER-GHFGSIPTTINQLSRLEILNLSHCSNLEQIPE 779


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 163/310 (52%), Gaps = 27/310 (8%)

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P +LG L AL  L +    + ELPEG+  L  L+ L L + ++L  + + I +L S++ +
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSD-NKLTSVPAEIGQLASLKDL 119

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEII 418
            I+N + L+  P        G  I R+ +S+  LN   ++L S+P+ +    SLT L + 
Sbjct: 120 RITN-NELEDLP--------GKIIGRL-TSLTGLNLSDNRLTSVPAEIGRLTSLTGLGL- 168

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY 477
           D  KL  +P E+G L +L  LR++G  +  VP  + +L +L+ L+L   +   S+P+ + 
Sbjct: 169 DGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLS-GNKLTSVPAEIG 227

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
              SLT L + D      +P EIG L  L VL + G  +  VP  +GQL++LE L L  N
Sbjct: 228 RLTSLTGLGL-DGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGN 286

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L  +P  + +L+SL +L LS+N L  +P  +  L+SL+   L  N L           T
Sbjct: 287 KLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKL-----------T 335

Query: 598 SIPSEFTSLR 607
           S+P+E   LR
Sbjct: 336 SVPAEIWRLR 345



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 105/234 (44%), Gaps = 45/234 (19%)

Query: 421 KKLERL---PDELGNLEALEELRVEGTGIREVPK------SLAQLALSKLKLKKCSS--- 468
           KKL  L   P +LG L AL  L +    + E+P+      SL  L LS  KL    +   
Sbjct: 52  KKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIG 111

Query: 469 --------------FESLPSRLYVS-KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                          E LP ++     SLT L + D +    +P EIG L  L  L + G
Sbjct: 112 QLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNR-LTSVPAEIGRLTSLTGLGLDG 170

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             +  VP  +G+L+SL  L L  N L  +P  + +L+SL  L+LS N L  +P  +  L+
Sbjct: 171 NKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLT 230

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR-LSVDLRNCLKLDPNELSEI 626
           SL  L L  N L           TS+P+E   L  L+V     L+LD N L+ +
Sbjct: 231 SLTGLGLDGNKL-----------TSVPAEIGRLTSLTV-----LRLDGNRLTSV 268



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 23/145 (15%)

Query: 498 DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
           D+ G +  L+    K  ++   P  LG+L++L  L L +N L  +PE ++ L+SL  L L
Sbjct: 39  DDKGRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFL 98

Query: 558 SNNNLERIPERLDPLSSLKYLDLFENNLDRIP----EYLRSFP---------TSIPSE-- 602
           S+N L  +P  +  L+SLK L +  N L+ +P      L S           TS+P+E  
Sbjct: 99  SDNKLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIG 158

Query: 603 -FTSLRLSVDLRNCLKLDPNELSEI 626
             TSL         L LD N+L+ +
Sbjct: 159 RLTSL-------TGLGLDGNKLTSV 176


>gi|15222556|ref|NP_176571.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325008|gb|AAG52450.1|AC010852_7 putative disease resistance protein; 28811-33581 [Arabidopsis
           thaliana]
 gi|332196041|gb|AEE34162.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1031

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPF-TELRYFEWHQFPLKTLN-IL 62
           E+ I+  +F ++  LR LK   S++     VH  E   F   LR   W  +P K+L    
Sbjct: 539 EVVISGKSFKRIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTF 598

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + LV L MP S++ +LW+  Q L  LK+++L  S+ L +LPDLS A NLE +DL YC 
Sbjct: 599 QPQYLVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPDLSNATNLERMDLSYCE 658

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL E  SS  +L+KLE L+++ C +L  +P  ++   L+ + +RGCS L+N+P M++   
Sbjct: 659 SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNMRGCSRLRNIPVMSTN-- 716

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            + L +    +E +P SI+  S +  L I S  +L+ I+     L+ L+ I
Sbjct: 717 ITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLI 767



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 46/310 (14%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S+LE L         L  + +   + L+ LPD L N   LE + +     + E+P S + 
Sbjct: 611 SQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATNLERMDLSYCESLVEIPSSFSH 669

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ SL ++ +  C     +P    N+  L V     T
Sbjct: 670 LHKLEWLEMNNCINLQVIPAHMNLA-SLETVNMRGCSRLRNIPVMSTNITQLYV---SRT 725

Query: 515 AIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           A+  +P S+   S LE L +S +     +  +P SL QL       L ++++E IPE + 
Sbjct: 726 AVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLD------LIDSDIETIPECIK 779

Query: 571 PLSSLKYLDLFE----NNLDRIPEYLRSFPT----SIPSEFTSL---RLSVDLRNCLKLD 619
            L  L  L+L       +L  +P  LR        S+ + F  L   +  ++  NC KL 
Sbjct: 780 SLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLNTPKAELNFTNCFKLG 839

Query: 620 PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKL 679
                 I++           + +  +   PG E+P  F HQ  G+T++++          
Sbjct: 840 QQAQRAIVQ----------RSLLLGTTLLPGRELPAEFDHQGKGNTLTIRPG-------- 881

Query: 680 MGFAFCVVVA 689
            GF  C+V++
Sbjct: 882 TGFVVCIVIS 891



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 36/283 (12%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLTSL 288
           R PNL+FL++     DG      P           L  +  P     P+ Q  +  L  L
Sbjct: 549 RIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLPPTFQPQY--LVEL 606

Query: 289 EIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
             +     E+L +    L  L ++ +     ++ELP+ L     L +++L  C  L  I 
Sbjct: 607 -YMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATNLERMDLSYCESLVEIP 664

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           SS   L  +E +E++NC NL+  P     +++ + +E +      +  CS+L ++P    
Sbjct: 665 SSFSHLHKLEWLEMNNCINLQVIP----AHMNLASLETV-----NMRGCSRLRNIP---V 712

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKL 463
           M  ++T L  +    +E +P  +     LE L +  +    GI  +P SL QL L     
Sbjct: 713 MSTNITQL-YVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLPISLKQLDLID--- 768

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
              S  E++P  +     L  L +  C+    LP+   +L +L
Sbjct: 769 ---SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFL 808


>gi|296089435|emb|CBI39254.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 206/416 (49%), Gaps = 54/416 (12%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G L+  N     GT+I E+P  +  L  L +L L++C +L   S +I  L S++S+++ 
Sbjct: 1   MGKLREFN---FSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLK 57

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
            CS LKG P         S I+ + +   L L+ C  L  LP S+C   SL +L +  C 
Sbjct: 58  GCSKLKGLP---------SSIKHLKALKNLDLSSCENLVRLPESICSLSSLETLFLNGCL 108

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
           K +  P   G++  L  LR++ T I+E+P S+  L AL  L L + SS  SLP  +    
Sbjct: 109 KFKGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSR-SSIVSLPESICSLT 167

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-EVP--ESLGQLSSLEWLVLSDN 537
           SL ++ + +C    +LP+++G L  L++L+   + IR ++P  +   +LSSL+ L+L D 
Sbjct: 168 SLKTINVDECSALHKLPEDLGELSRLEILSF--SYIRCDLPLIKRDSRLSSLKTLILIDC 225

Query: 538 NLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           NL+  +   +  L SL  L LS+ N+  IP  +  LSSL+ L+L  N+   IP  +    
Sbjct: 226 NLKDGVVLDICHLLSLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRL- 284

Query: 597 TSIPSEFTSLRLSVDLRNCLK-------------LDPNELSEIIKDGWMKQSVNGETYIT 643
                  TSL    +LR+C K             LD +  S+      ++++ NG  Y +
Sbjct: 285 ----YHLTSL----NLRHCNKLQQVPELPSSLRLLDVHGPSDGTSSSPIRRNWNG-AYFS 335

Query: 644 KSMY--------FPGNE-IPKWFRHQSTGSTISLKTPQPTGYNK-LMGFAFCVVVA 689
            S Y         PG+  IPKW +++  GS I +  PQ    N   +GFA   V A
Sbjct: 336 DSWYSGNGICIVIPGSSGIPKWIKNKRKGSEIEIGLPQNWHLNNDFLGFALYCVYA 391



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 16/319 (5%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
           G  I E+P SIK L+ + ELL+  CK+L   S +I  L  L+S+++  C  L+ L     
Sbjct: 11  GTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPSSIK 70

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           ++   ++       L L  C     LP   C   SL +L +  C  F+  P   G++  L
Sbjct: 71  HLKALKN-------LDLSSCENLVRLPESICSLSSLETLFLNGCLKFKGFPGVKGHMNNL 123

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
             L +D TAI+E+P  +  L  L  L L   S +  +  SI  L S+++I +  CS L  
Sbjct: 124 RVLRLDSTAIKEIPSSITHLKALEYLNLSR-SSIVSLPESICSLTSLKTINVDECSALHK 182

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
            PE      D   + R+        +C     L        SL +L +IDC   + +  +
Sbjct: 183 LPE------DLGELSRLEILSFSYIRCDL--PLIKRDSRLSSLKTLILIDCNLKDGVVLD 234

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           + +L +L+EL +    IR +P  +  L+  ++     + F S+P+ +     LTSL +  
Sbjct: 235 ICHLLSLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLYHLTSLNLRH 294

Query: 490 CKNFMRLPDEIGNLEYLKV 508
           C    ++P+   +L  L V
Sbjct: 295 CNKLQQVPELPSSLRLLDV 313



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 23/246 (9%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           CS L    SSI++L  L+ LDL  C++L  LP SI S   L+ L L GC   K  P +  
Sbjct: 59  CSKLKGLPSSIKHLKALKNLDLSSCENLVRLPESICSLSSLETLFLNGCLKFKGFPGVKG 118

Query: 180 CHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            H+ +   L L    I+E+PSSI  L  + E L  S   + ++  SI  L  L++I +  
Sbjct: 119 -HMNNLRVLRLDSTAIKEIPSSITHLKAL-EYLNLSRSSIVSLPESICSLTSLKTINVDE 176

Query: 238 CPNLQ----------FLEMPS-----CNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQC 280
           C  L            LE+ S     C++   +   + SS   L L  C   + +    C
Sbjct: 177 CSALHKLPEDLGELSRLEILSFSYIRCDLPLIKRDSRLSSLKTLILIDCNLKDGVVLDIC 236

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
              SL  L +  C N   +P+++  L +L  L +DG     +P G+ +L  L+ L L++C
Sbjct: 237 HLLSLKELHLSSC-NIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLYHLTSLNLRHC 295

Query: 341 SELEYI 346
           ++L+ +
Sbjct: 296 NKLQQV 301



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 8/191 (4%)

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           H  NL  L++  + + ++   + +L +L+ ++L  S +++    +    +L+ +++  CS
Sbjct: 119 HMNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRSSIVSLPESICSLTSLKTINVDECS 178

Query: 123 SLTETHSSIQYLNKLEVLDLD--RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           +L +    +  L++LE+L     RC  L  +        LK L+L  C NLK+   +  C
Sbjct: 179 ALHKLPEDLGELSRLEILSFSYIRC-DLPLIKRDSRLSSLKTLILIDC-NLKDGVVLDIC 236

Query: 181 HLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
           HL S   L L    I  +P+ I CLS++ E+L        +I + I +L  L S+ +  C
Sbjct: 237 HLLSLKELHLSSCNIRGIPNDIFCLSSL-EILNLDGNHFSSIPAGISRLYHLTSLNLRHC 295

Query: 239 PNLQFL-EMPS 248
             LQ + E+PS
Sbjct: 296 NKLQQVPELPS 306


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 199/469 (42%), Gaps = 80/469 (17%)

Query: 46   LRYFEWHQFPLKTLNILHWE---NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
            L++ EW  F +   + + +     LV L M G    Q     +N  ++K +DL Y   L 
Sbjct: 590  LKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVDLSYCGTLK 649

Query: 103  KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKL------------------------E 138
            + P+ S   NLE L L  C+SL   H S+  L+KL                        E
Sbjct: 650  ETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLE 709

Query: 139  VLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG---IEE 195
            VL+L RC+ +  +P    S  LK L LR C  L+ +       L   + L   G   +E 
Sbjct: 710  VLNLSRCRKIEEIPDLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLER 769

Query: 196  LPSSIKCLSNIGELLIYSCKRLENISSSIF-------KLQFLESIRIHRC---------- 238
            LP     L ++  L + SC +LE    S F       K + L+ + +  C          
Sbjct: 770  LPIYTNKLESLELLNLASCLKLETFFDSSFRKFPSHLKFKSLKVLNLRDCLNLEEITDFS 829

Query: 239  --PNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
               NL+ L++ +C     I  +         L+L  C   E LPS     KSL SL   +
Sbjct: 830  MASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKLPSS-LKLKSLDSLSFTN 888

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C   E+LP+   N+++L  + ++GTAIR LP  +G L  L  L L +C+ L  + + I  
Sbjct: 889  CYKLEQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHW 948

Query: 353  LKSVESIEISNCSNLKGFP-------------------EIPFCNIDGSG----IERIPSS 389
            LKS+E + +  CS L  FP                   ++  CNI  S     +  + +S
Sbjct: 949  LKSLEELHLRGCSKLDMFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTS 1008

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE---RLPDELGNLEA 435
            + KLN      S   SL  FKSL  LE+ +CK L+   +LP  L  + A
Sbjct: 1009 LEKLNLSGNTFSCLPSLQNFKSLRFLELRNCKFLQNIIKLPHHLARVNA 1057



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 174/371 (46%), Gaps = 51/371 (13%)

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSL 285
           I    C  ++ +++  C   GT  KE P+        +L L+ C   + +         L
Sbjct: 629 IAFENCKTMKHVDLSYC---GTL-KETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKL 684

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
            +L++  C N E+ P     L++L  L +     I E+P+ L   + L +L L+ C  L 
Sbjct: 685 VTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPD-LSASSNLKELYLRECDRLR 743

Query: 345 YISSSIFK-LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL- 402
            I  SI + L  +  +++  C NL+  P      I  + +E +   +L L  C KLE+  
Sbjct: 744 IIHDSIGRSLDKLIILDLEGCKNLERLP------IYTNKLESL--ELLNLASCLKLETFF 795

Query: 403 -------PSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALE-----ELRVEGTGIRE 448
                  PS L  FKSL  L + DC  LE + D     NLE L+      LR+    I E
Sbjct: 796 DSSFRKFPSHL-KFKSLKVLNLRDCLNLEEITDFSMASNLEILDLNTCFSLRI----IHE 850

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
              SL +L    L+L  C + E LPS L + KSL SL   +C    +LP+   N++ L+V
Sbjct: 851 SIGSLDKLI--TLQLDLCHNLEKLPSSLKL-KSLDSLSFTNCYKLEQLPEFDENMKSLRV 907

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
           + + GTAIR +P S+G L  LE L L+D  NL  +P  ++ L SL  L L   + L+  P
Sbjct: 908 MNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFP 967

Query: 567 ERLDPLSSLKY 577
               P SSL +
Sbjct: 968 ----PRSSLNF 974


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 147/264 (55%), Gaps = 17/264 (6%)

Query: 4   INSEIQINPYTFSKMTELRLLK---------FCGSKNKCMVHSLEGVPFTELRYFEWHQF 54
           I  ++Q+N   F+KM +L+ L          F   ++  +   L+ +P  ELRY  W  +
Sbjct: 573 IIKDLQLNSKVFAKMNKLQYLDIYTKGYYVFFQIPRSLNLPQGLKSLP-DELRYLRWAYY 631

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           PL++L +  + E LV L +  S+V +LW + +++V+LK + L  S  L +LP+LS A+NL
Sbjct: 632 PLESLPSKFNGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNL 691

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            I+DL  C  LT  H S+  LNKLE LDL  C SLTSL ++IH   L+ L L GC  LK 
Sbjct: 692 AIVDLRMCGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCIKLKE 751

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
              +TS  +   L L   GI++L SSI   + + +LL+ S   +EN+  SI +L  L  +
Sbjct: 752 FS-VTSKEM-VLLNLEHTGIKQLSSSIGLQTKLEKLLL-SHSFIENLPKSIRRLSSLRHL 808

Query: 234 RIHRCPNLQFL-EMPS--CNIDGT 254
            +  C  LQ L ++PS    +D T
Sbjct: 809 ELRHCRKLQRLPKLPSSLITLDAT 832



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 146/320 (45%), Gaps = 37/320 (11%)

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           A+ +LR+ G      P   +   L KL L  C S  SL S +++S SL  L +  C   +
Sbjct: 692 AIVDLRMCGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLS-SLRYLSLAGC---I 747

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
           +L +     + + +L ++ T I+++  S+G  + LE L+LS + ++ +P+S+ +LSSL  
Sbjct: 748 KLKEFSVTSKEMVLLNLEHTGIKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRH 807

Query: 555 LKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR 613
           L+L +   L+R+P+    L +L        +L+ +     +FP+         +  V   
Sbjct: 808 LELRHCRKLQRLPKLPSSLITLDATGCV--SLENV-----TFPSRALQVLKENKTKVSFW 860

Query: 614 NCLKLDPNELSEI---IKDGWMK------QSVNGETYITKSMY-FPGNEIPKWFRHQSTG 663
           NC+KL  + L  I    +   MK       + +   Y  +  Y +PG+ +PKW  +++T 
Sbjct: 861 NCVKLVEHSLKAIELNAQINMMKFAHKQISTSSDHDYDAQGTYVYPGSSVPKWLVYRTTR 920

Query: 664 STISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDS 723
           + + +        +  + F FC +V            VE +     F++     +E    
Sbjct: 921 NYMFIDLSFVNHSSDQLAFIFCFIVP----------QVESEGFILRFNISVGGEAEN--- 967

Query: 724 YTSSYLGKISH-VESDHVFL 742
               YL K S  ++SDHV+L
Sbjct: 968 -IQVYLNKPSQEIKSDHVYL 986



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 12/107 (11%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIP 387
           L KL+L  C  L  + S+I  L S+  + ++ C  LK F     E+   N++ +GI+++ 
Sbjct: 715 LEKLDLGGCFSLTSLKSNI-HLSSLRYLSLAGCIKLKEFSVTSKEMVLLNLEHTGIKQLS 773

Query: 388 SSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           SS+    K  KL       E+LP S+    SL  LE+  C+KL+RLP
Sbjct: 774 SSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRHLELRHCRKLQRLP 820


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 138/270 (51%), Gaps = 17/270 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   ELR+ EWH +P K+L   L  +
Sbjct: 639 EAQWNMKAFSKMSRLRLLKI---DNVQLSEGPEDLS-KELRFLEWHSYPSKSLPAGLQVD 694

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L+K PDL+   NL  L L  C+SL+
Sbjct: 695 GLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEGCTSLS 754

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT---SCHL 182
           E H S+     L+ ++L  CKS   LP+++  + LK   L GC+ L+  P +    +C +
Sbjct: 755 EVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLM 814

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L G GI EL SSI  L  +  L + +CK LE+I SSI  L+ L+ + +  C  L+
Sbjct: 815 E--LCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK 872

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
                  NI     K +   E      PRP
Sbjct: 873 -------NIPENLGKVESLEEFDGLSNPRP 895



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N S  +L Y   S   LK +    S+ +S   +L G P + 
Sbjct: 685 KSLPAGL-QVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLS 743

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C     LPS+L M +SL    +  C KLE+
Sbjct: 744 SLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEM-ESLKVFTLDGCTKLEK 802

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L EL ++GTGI E+  S+  L  L  L +  C + ES+PS +   KSL  
Sbjct: 803 FPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKK 862

Query: 485 LEIIDCKNFMRLPDEIGNLEYLK 507
           L++  C     +P+ +G +E L+
Sbjct: 863 LDLSGCSELKNIPENLGKVESLE 885



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 23/177 (12%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L++I+  N     + PD L  +  L+ LI++G T++ E+   LG+   L  + L 
Sbjct: 714 KSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLV 772

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--------PFCNIDGSGIERIPSS- 389
           NC     + S++ +++S++   +  C+ L+ FP+I          C +DG+GI  + SS 
Sbjct: 773 NCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVGNMNCLMELC-LDGTGIAELSSSI 830

Query: 390 -------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                  VL +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE 
Sbjct: 831 HHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEF 887



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 13/207 (6%)

Query: 410 KSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
           KS  +L++I+      L + PD L  +  L  L +EG T + EV  SL +   L  + L 
Sbjct: 714 KSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLV 772

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C SF  LPS L + +SL    +  C    + PD +GN+  L  L + GT I E+  S+ 
Sbjct: 773 NCKSFRILPSNLEM-ESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIH 831

Query: 525 QLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
            L  LE L +++  NL+ IP S+  L SL  L LS  + L+ IPE L  + SL+  D   
Sbjct: 832 HLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDGLS 891

Query: 583 NNLDRIPEYLRSFPTS-IPSEFTSLRL 608
           N     P +  +FP + IP  F   +L
Sbjct: 892 NPR---PGFGIAFPGNEIPGWFNHRKL 915



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 13/174 (7%)

Query: 208 ELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN----IDGTRSKE 258
           E L Y CK     ++ N+S+S   L   ++  +   PNL  L +  C     +  +  + 
Sbjct: 707 EQLWYGCKSAVNLKVINLSNS---LNLSKTPDLTGIPNLSSLILEGCTSLSEVHPSLGRH 763

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
           +    + L  C     LPS   M +SL    +  C   E+ PD +GN+  L  L +DGT 
Sbjct: 764 KNLQYVNLVNCKSFRILPSNLEM-ESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTG 822

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           I EL   +  L  L  L + NC  LE I SSI  LKS++ +++S CS LK  PE
Sbjct: 823 IAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPE 876



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 37/206 (17%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           LS L L+ C+S   +   L   K+L  + +++CK+F  LP  +  +E LKV T+ G T +
Sbjct: 742 LSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKL 800

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
            + P+ +G ++ L  L L    +  +  S++ L  L  L ++N  NLE IP  +  L SL
Sbjct: 801 EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSL 860

Query: 576 KYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
           K LDL   + L  IPE L    +    EF  L            +P       + G+   
Sbjct: 861 KKLDLSGCSELKNIPENLGKVESL--EEFDGLS-----------NP-------RPGF--- 897

Query: 635 SVNGETYITKSMYFPGNEIPKWFRHQ 660
                      + FPGNEIP WF H+
Sbjct: 898 ----------GIAFPGNEIPGWFNHR 913


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 223/466 (47%), Gaps = 63/466 (13%)

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           STL LL  G+E+LP  +  +  I  L + S  RL  I + I +L  L+ + ++   N Q 
Sbjct: 145 STLNLLEFGLEKLPPLVFQIPKIQTLCLQS-NRLTEIPTEINQLTHLQELNLN---NNQL 200

Query: 244 LEMP----------SCNIDGTRSKEQPSSELKLKK-------CPRPESLPSGQCMFKSLT 286
            E P          S N+ G +    P +  KL K         R ++LP       +L 
Sbjct: 201 TEFPLAITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQ 260

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           +L +  C   ++LP+ +  L+ + +L +D   I + P  + +L+ L  L+L+  ++L+++
Sbjct: 261 NLTLSSC-RIQQLPESMQQLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQK-NQLKHL 318

Query: 347 SSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKC--- 396
             SI  L+ +  + +SN ++LK  P       ++   ++  + ++ +P+++ KL++    
Sbjct: 319 PESIGNLRKLSHLSLSN-NHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELREL 377

Query: 397 ----SKLESLPSSLCMFKSLTSLEIIDCK----------------------KLERLPDEL 430
               ++L  LP  +    +LT L++   K                      +L+ LP  L
Sbjct: 378 NLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSL 437

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           G L+ L +L V+G  +  +P  +  L  LS L L   +  + LP  L   K+L  L + D
Sbjct: 438 GKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLS-YNQLQVLPKSLGKLKNLHQLSV-D 495

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
                 LP  I +L+ L +L++   A+  +PES+GQLS +  L L  N L  +PES+ QL
Sbjct: 496 GNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQL 555

Query: 550 SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           S +V L L  N L ++P+ +  + SL  L+L  N L ++P+ ++  
Sbjct: 556 SKVVHLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKL 601



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 227/473 (47%), Gaps = 50/473 (10%)

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCS------NLKNLPK 176
           LTE  + I  L  L+ L+L+  + LT  P +I H   LK L L G        N+  L K
Sbjct: 177 LTEIPTEINQLTHLQELNLNNNQ-LTEFPLAITHLTTLKSLNLSGNKFHCVPVNIGKLSK 235

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-----FLE 231
           + +  L+S        I+ LP ++  LSN+  L + SC R++ +  S+ +L+      L+
Sbjct: 236 LVTFTLKSD------RIKALPETMGTLSNLQNLTLSSC-RIQQLPESMQQLKQIGKLALD 288

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           + RI + P                +K      LKL+K  + + LP      + L+ L + 
Sbjct: 289 NNRIEKFP-------------AVITKLSSLVYLKLQKN-QLKHLPESIGNLRKLSHLSLS 334

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           +  + ++LPD +GNL  L  L +    +  LP  +G+L+ L +L L+  ++L  +   + 
Sbjct: 335 NN-HLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQ-NQLSCLPQQVT 392

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
           ++ ++  ++++  + L   P           +  +    L     ++L+ LP SL   K+
Sbjct: 393 QILTLTQLKLT-YNKLTHLP---------PKLSNLQQLSLLNLSYNQLQVLPKSLGKLKN 442

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
           L  L + D  KL  LP  +GNL  L  L +    ++ +PKSL +L  L +L +   +   
Sbjct: 443 LHQLSV-DGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVD-GNKLT 500

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
            LP  +Y  K L  L + +      LP+ IG L  +  L ++G  + ++PES+GQLS + 
Sbjct: 501 ELPKIIYDLKKLFLLSL-NYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVV 559

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            L L  N L  +P+S+  + SL +L L NN L ++P+ +  L  L++L L +N
Sbjct: 560 HLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLDKN 612



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 39/279 (13%)

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           G+E++P  V ++ K         +LC+             +L  +P E+  L  L+EL +
Sbjct: 153 GLEKLPPLVFQIPKIQ-------TLCL----------QSNRLTEIPTEINQLTHLQELNL 195

Query: 442 EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
               + E P ++  L   K      + F  +P  +     L +  +        LP+ +G
Sbjct: 196 NNNQLTEFPLAITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTL-KSDRIKALPETMG 254

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
            L  L+ LT+    I+++PES+ QL  +  L L +N ++  P  + +LSSLV LKL  N 
Sbjct: 255 TLSNLQNLTLSSCRIQQLPESMQQLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQ 314

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIPE----------------YLRSFPTSIP--SEF 603
           L+ +PE +  L  L +L L  N+L ++P+                 L + P +I   SE 
Sbjct: 315 LKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSEL 374

Query: 604 TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
             L L  +  +CL   P ++++I+    +K + N  T++
Sbjct: 375 RELNLEQNQLSCL---PQQVTQILTLTQLKLTYNKLTHL 410



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 212/500 (42%), Gaps = 104/500 (20%)

Query: 53  QFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQ 111
           +FPL    I H   L SL + G+K   +  ++  L  L    LK  + +  LP+ +    
Sbjct: 202 EFPLA---ITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDR-IKALPETMGTLS 257

Query: 112 NLEILDLGYC--SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGC 168
           NL+ L L  C    L E+   ++ + KL  LD +R +   ++ T + S  YLK       
Sbjct: 258 NLQNLTLSSCRIQQLPESMQQLKQIGKL-ALDNNRIEKFPAVITKLSSLVYLK----LQK 312

Query: 169 SNLKNLPKMTSCHLR--STLPLLGVGIEELPSSIKCLSNIGELLIYSCKR--LENISSSI 224
           + LK+LP+ +  +LR  S L L    +++LP SI    N+ +L++ S  R  L+ + ++I
Sbjct: 313 NQLKHLPE-SIGNLRKLSHLSLSNNHLKKLPDSI---GNLAQLMVLSVARNQLDALPATI 368

Query: 225 FKLQFLESIRIHR-----CPN--LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
            KL  L  + + +      P    Q L +    +   +    P         P+  +L  
Sbjct: 369 GKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLP---------PKLSNLQQ 419

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
              +  S   L++        LP  LG L+ L++L +DG  +  LP G+G L  LS L L
Sbjct: 420 LSLLNLSYNQLQV--------LPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNL 471

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
            + ++L+ +  S+ KLK++  +                  +DG+ +  +P  +  L K  
Sbjct: 472 -SYNQLQVLPKSLGKLKNLHQLS-----------------VDGNKLTELPKIIYDLKKLF 513

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
            L                  ++   L  LP+ +G L  +  L +EG  + ++P+S+ QL+
Sbjct: 514 LLS-----------------LNYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLS 556

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
                  K                      ++     +LP  IGN+  L  L +K   + 
Sbjct: 557 -------KVVHLN-----------------LEGNQLTQLPKSIGNMRSLYALNLKNNQLT 592

Query: 518 EVPESLGQLSSLEWLVLSDN 537
           ++P+++ +L  L +L+L  N
Sbjct: 593 KLPQTIQKLRGLRFLLLDKN 612


>gi|147856100|emb|CAN82453.1| hypothetical protein VITISV_003327 [Vitis vinifera]
          Length = 762

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 194/423 (45%), Gaps = 68/423 (16%)

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           P    +PD   N++ L +L +DGTAI+E+P  +  L++L +   +NC  LE +  SI +L
Sbjct: 179 PTLTTMPDTW-NMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRL 237

Query: 354 KSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLNKCSK 398
           K ++ +  +NCS L  FPE+          ++ G+ I+ +PSS+        L L  C K
Sbjct: 238 KYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKK 297

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK------- 451
           L +LP+ +C  KSL +L +  C KL +LP  LG+L+ LE L     G    P        
Sbjct: 298 LVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLC 357

Query: 452 SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL----PDEIGNLEYLK 507
           SL  L L+ L L + S  + +  RLY      SLE++D  N   +     DEI +L  L+
Sbjct: 358 SLRILHLNGLNLMQWSIQDDI-CRLY------SLEVLDLTNCNLIDDGTADEIFHLSSLQ 410

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI-IPESLNQLSSLVSLKLSNNNLERIP 566
           VL +    I ++P  + QLS L+ L  S   + + IPE  + L S+     +       P
Sbjct: 411 VLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITLSNP 470

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR---NCLKLDPNEL 623
                 SSL +  LF           + F ++I +         DL    +C    P   
Sbjct: 471 ------SSLFWASLF-----------KCFKSAIQAWNLHATFVQDLECGNHCYDPSPEAW 513

Query: 624 SEIIKDGWMKQSVNGETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGYNK-LMG 681
            +    G   Q +        S+  P  + IP+W RHQ  GS ++ + P+    NK L+G
Sbjct: 514 PDFCYFG---QGI--------SILIPRSSGIPEWIRHQKNGSRVTTELPRYWYKNKDLLG 562

Query: 682 FAF 684
           FA 
Sbjct: 563 FAL 565



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 32/311 (10%)

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L  +P   +      L L G  I+E+PSSI  LS + E    +CK LE++  SI +L++L
Sbjct: 181 LTTMPDTWNMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYL 240

Query: 231 ESIRIHRCPNL-QFLE-------MPSCNIDGTRSKEQPSS--------ELKLKKCPRPES 274
           + +    C  L  F E       +   ++ GT  ++ PSS         L L  C +  +
Sbjct: 241 QVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVT 300

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID--GTAIRELPEGLGQLALL 332
           LP+  C  KSL +L +  C    +LP  LG+LQ L  L     G+    LP   G L  L
Sbjct: 301 LPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSG-LCSL 359

Query: 333 SKLELKNCSELEY-ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
             L L   + +++ I   I +L S+E ++++NC+ +           DG+  E    S L
Sbjct: 360 RILHLNGLNLMQWSIQDDICRLYSLEVLDLTNCNLID----------DGTADEIFHLSSL 409

Query: 392 KLNKCSK--LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           ++   S+  +  +P+ +     L  L    C+    +P+   +L +++     G      
Sbjct: 410 QVLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITLSN 469

Query: 450 PKSLAQLALSK 460
           P SL   +L K
Sbjct: 470 PSSLFWASLFK 480



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 39/295 (13%)

Query: 101 LTKLPDLSLAQNLEILDLGYC--SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HS 157
           LT +PD     N+E L   Y   +++ E  SSI  L+ L       CK+L SLP SI   
Sbjct: 181 LTTMPD---TWNMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRL 237

Query: 158 KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
           KYL+ L    CS L + P+ M + +    L L G  I++LPSSI+ L  +  L + SCK+
Sbjct: 238 KYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKK 297

Query: 217 LENISSSIFKLQFLESIRIHRCP----------NLQFLEMPSCNIDGTRSKEQPS----- 261
           L  + + I  L+ L+++ ++ C           +LQ LE       G+ +   PS     
Sbjct: 298 LVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLC 357

Query: 262 -------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER-LPDELGNLQALNRLI 313
                  + L L +     S+    C   SL  L++ +C   +    DE+ +L +L  L+
Sbjct: 358 SLRILHLNGLNLMQ----WSIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLL 413

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL-KSVESIEISNCSNL 367
           +    I ++P G+ QL+ L  L   +C     ++  I +L  S+ SI++  C+ L
Sbjct: 414 LSRNHISKIPAGISQLSKLQVLGFSHCE----MAVEIPELPSSLRSIDVHACTGL 464


>gi|147777715|emb|CAN66808.1| hypothetical protein VITISV_010918 [Vitis vinifera]
          Length = 615

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 74/388 (19%)

Query: 8   IQINPYTFSKMTELRLLKFCGSK--------NKCMVHSLEGVPFTELRYFEWHQFPLKTL 59
           + I   +F  MT LRLLK   ++        NK  +      P  ELRY  WH +PL+ L
Sbjct: 271 MDITTKSFEMMTRLRLLKIYWARKSTSMREDNKIKLSKDFEFPSHELRYLYWHGYPLEYL 330

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL-AQNLEILD 117
            +  + ++LV L M  + + QLW+  + L  L  I + +S+ L ++PD S+ A NLE L 
Sbjct: 331 LSSFYAKDLVELDMCYNSLKQLWESDEPLEKLNTISVSFSQHLMEIPDFSIRAPNLEKLI 390

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L  CSS  E H SI  L K+ VL++  CK L S P+ I  + LK L   GCS LK  P +
Sbjct: 391 LDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLGSFPSIIDMEALKILNFAGCSELKKFPDI 450

Query: 178 TSCHLRSTLPLL--GVGIEELPSSIKC-LSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
             C++   L L      IEEL SSI   ++ +  L +  CK L  + + IFKL+ L  + 
Sbjct: 451 -QCNMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFKLKSLXYLF 509

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           +  C  L+                                                    
Sbjct: 510 LSGCSKLE---------------------------------------------------- 517

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           NF   P+ + +++ L  L++DGT+I  LP  + +L  L  L ++ C +L  + +++  L 
Sbjct: 518 NF---PEIMEDMENLXELLLDGTSIEALPFSIERLKGLGLLNMRKCKKLR-MRTNLNPLW 573

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSG 382
            ++   +S    ++G P  P+CN+ G+G
Sbjct: 574 VLKKYGVSKA--IEGKP--PYCNLSGNG 597



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 29/200 (14%)

Query: 287 SLEIIDCPNFE-RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
           S  +++ P+F  R P+       L +LI+DG ++  E+   +G+L  +  L +KNC +L 
Sbjct: 370 SQHLMEIPDFSIRAPN-------LEKLILDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLG 422

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--------GSGIERIPSSV------ 390
              S I  +++++ +  + CS LK FP+I  CN++         + IE + SS+      
Sbjct: 423 SFPS-IIDMEALKILNFAGCSELKKFPDIQ-CNMEHLLELYLSSTTIEELSSSIGWHITG 480

Query: 391 ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
              L LN+C  L  LP+ +   KSL  L +  C KLE  P+ + ++E L EL ++GT I 
Sbjct: 481 LVLLDLNRCKVLTCLPTCIFKLKSLXYLFLSGCSKLENFPEIMEDMENLXELLLDGTSIE 540

Query: 448 EVPKSLAQL-ALSKLKLKKC 466
            +P S+ +L  L  L ++KC
Sbjct: 541 ALPFSIERLKGLGLLNMRKC 560



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 16/210 (7%)

Query: 237 RCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           R PNL+ L +  C+    +  +  + +    L +K C +  S PS   M ++L  L    
Sbjct: 382 RAPNLEKLILDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLGSFPSIIDM-EALKILNFAG 440

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG-QLALLSKLELKNCSELEYISSSIF 351
           C   ++ PD   N++ L  L +  T I EL   +G  +  L  L+L  C  L  + + IF
Sbjct: 441 CSELKKFPDIQCNMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIF 500

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
           KLKS+  + +S CS L+ FPEI         +E + +    L   + +E+LP S+   K 
Sbjct: 501 KLKSLXYLFLSGCSKLENFPEI---------MEDMENLXELLLDGTSIEALPFSIERLKG 551

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRV 441
           L  L +  CKKL R+   L  L  L++  V
Sbjct: 552 LGLLNMRKCKKL-RMRTNLNPLWVLKKYGV 580



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 3/142 (2%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           VL +  C KL S PS + M ++L  L    C +L++ PD   N+E L EL +  T I E+
Sbjct: 412 VLNIKNCKKLGSFPSIIDM-EALKILNFAGCSELKKFPDIQCNMEHLLELYLSSTTIEEL 470

Query: 450 PKSLAQ--LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
             S+      L  L L +C     LP+ ++  KSL  L +  C      P+ + ++E L 
Sbjct: 471 SSSIGWHITGLVLLDLNRCKVLTCLPTCIFKLKSLXYLFLSGCSKLENFPEIMEDMENLX 530

Query: 508 VLTIKGTAIREVPESLGQLSSL 529
            L + GT+I  +P S+ +L  L
Sbjct: 531 ELLLDGTSIEALPFSIERLKGL 552


>gi|297836989|ref|XP_002886376.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332217|gb|EFH62635.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 145/260 (55%), Gaps = 16/260 (6%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKT 58
           S IN E+ I    F +M  LR L+   SK+    +V+  E + F   LR  +W  +P K+
Sbjct: 484 SGIN-EVIIKKGAFKRMPNLRFLRVYKSKDDGNDVVYIPEEMEFPRFLRLLDWEAYPSKS 542

Query: 59  LNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L    + E+LV L +  +++ +LW+  Q+L +LK++DL++S  L +LPDLS A NLE LD
Sbjct: 543 LPANFNAESLVELILSDNQLEKLWEGSQHLPNLKKMDLRHSYDLKQLPDLSNATNLESLD 602

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           +  C+SL E  S I  L+KLE L +  C +L  +PT ++   L  L ++GCS LK  P +
Sbjct: 603 VHLCASLVEFPSYIGNLHKLEELKMGFCINLQVVPTLVNLASLDYLDMKGCSQLKKFPDI 662

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR--------LENISSSIFKLQF 229
            S ++R+ L +    +EELP SI+  S +  L IY   +        +E +   I  L  
Sbjct: 663 -STNIRA-LVIADTILEELPRSIRLWSRLQYLSIYGSVKDPLLGRADIEKVPDWIKDLPR 720

Query: 230 LESIRIHRCPNLQFL-EMPS 248
           L+S++I  CP L  L E+PS
Sbjct: 721 LQSLQIFGCPKLASLPEIPS 740



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 142/322 (44%), Gaps = 57/322 (17%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPKSLAQ 455
           ++LE L        +L  +++     L++LPD L N   LE L V     + E P  +  
Sbjct: 560 NQLEKLWEGSQHLPNLKKMDLRHSYDLKQLPD-LSNATNLESLDVHLCASLVEFPSYIGN 618

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L +LK+  C + + +P+ + ++ SL  L++  C    + PD   N+   + L I  T
Sbjct: 619 LHKLEELKMGFCINLQVVPTLVNLA-SLDYLDMKGCSQLKKFPDISTNI---RALVIADT 674

Query: 515 AIREVPESLGQLSSLEWL---------VLSDNNLQIIPESLNQLSSLVSLKLSN----NN 561
            + E+P S+   S L++L         +L   +++ +P+ +  L  L SL++       +
Sbjct: 675 ILEELPRSIRLWSRLQYLSIYGSVKDPLLGRADIEKVPDWIKDLPRLQSLQIFGCPKLAS 734

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPN 621
           L  IP      SSLK   L  N  + + E L SFP  I S+ TSL       NC KL   
Sbjct: 735 LPEIP------SSLK--TLIANTCESL-ETLASFP--IDSQVTSLFFP----NCFKLGQE 779

Query: 622 ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
                      +Q +  ++ +      PG  IP  F H+  G++++ +           G
Sbjct: 780 ----------ARQVITQQSLLA---CLPGRTIPAEFHHRDIGNSLTFRP-------GFFG 819

Query: 682 FAFCVVVA--CSVSECCRHESV 701
           F  CVVV+   ++ E  RH S+
Sbjct: 820 FRICVVVSPKPAMGEHIRHYSM 841



 Score = 39.7 bits (91), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 36/210 (17%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L SL++  C +    P  +GNL  L  L +      ++   L  LA L  L++K CS+L
Sbjct: 597 NLESLDVHLCASLVEFPSYIGNLHKLEELKMGFCINLQVVPTLVNLASLDYLDMKGCSQL 656

Query: 344 EY---ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           +    IS++I  L   ++I      +++ +  + + +I GS    +   +L     + +E
Sbjct: 657 KKFPDISTNIRALVIADTILEELPRSIRLWSRLQYLSIYGS----VKDPLLGR---ADIE 709

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK 460
            +P  +     L SL+I  C KL  LP                    E+P SL  L  + 
Sbjct: 710 KVPDWIKDLPRLQSLQIFGCPKLASLP--------------------EIPSSLKTLIAN- 748

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
                C S E+L S   +   +TSL   +C
Sbjct: 749 ----TCESLETLAS-FPIDSQVTSLFFPNC 773


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 165/323 (51%), Gaps = 20/323 (6%)

Query: 284 SLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            L +L+++   N     LP E+G LQ L  L ++   +  LP G+GQL  L  L L N +
Sbjct: 82  QLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHN-N 140

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
            L+ +   I KL+ +E + +   + L+  P+       +   ++    ++  P  + KL 
Sbjct: 141 RLKSLPKEIGKLQKLERLYLG-GNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLR 199

Query: 395 KCSKLESLPSSLCMFKS----LTSLE--IIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
              +L    + L +       L SLE  I++  +L  LP+E+G L+ LEEL +    +  
Sbjct: 200 SLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVT 259

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P+ +  L  L  L L   + F +LP +++  ++L  L +   +    LP EIG LE L+
Sbjct: 260 LPQEIGALENLQNLHLY-SNQFRTLPKQIWQLQNLQDLHLAHNQ-LTVLPQEIGQLENLQ 317

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L +    ++ +P+ +G+L  L+WL+L++N L ++P+ + QL  L  L L +N L  +P+
Sbjct: 318 SLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPK 377

Query: 568 RLDPLSSLKYLDLFENNLDRIPE 590
            +  L  LKYLDL  N L  +PE
Sbjct: 378 EIWKLEKLKYLDLANNQLRLLPE 400



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 214/454 (47%), Gaps = 36/454 (7%)

Query: 152 PTSIHSKYLKRLVLRGCSN-LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELL 210
           P  + S +L R  LR  S  +  L  +   +L +        +  LP+ I  L N+  L 
Sbjct: 37  PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENN------QLATLPNEIGQLENLQVLS 90

Query: 211 IYSCKRLENISSSIFKLQFL-----ESIRIHRCPNL--QFLEMPSCNIDGTRSKEQPSSE 263
           +Y+  RL  +   +  LQ L     E+ ++   PN   Q   + + N+   R K  P   
Sbjct: 91  LYN-NRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEI 149

Query: 264 LKLKKCPRP-------ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG 316
            KL+K  R         +LP      + L  L +      +  P+E+G L++L RLI+D 
Sbjct: 150 GKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHL-SRDQLKTFPEEIGKLRSLKRLILDS 208

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
             +  L + +G+L  L +L L+N ++L  + + I KL+++E + +SN + L   P+    
Sbjct: 209 NQLVVLSQEIGKLRSLERLILEN-NQLATLPNEIGKLQNLEELNLSN-NQLVTLPQ---- 262

Query: 377 NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             +   +E + +  L     ++  +LP  +   ++L  L +    +L  LP E+G LE L
Sbjct: 263 --EIGALENLQNLHLY---SNQFRTLPKQIWQLQNLQDLHLAH-NQLTVLPQEIGQLENL 316

Query: 437 EELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           + L +    ++ +PK + +L   K  +   +    LP  +   + L  L + D +    L
Sbjct: 317 QSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQ-LTTL 375

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
           P EI  LE LK L +    +R +PE +G+L  LE+L LS+N L+++P+ + +L  L  L 
Sbjct: 376 PKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLD 435

Query: 557 LSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           LSNN L  +P+ +  L  L+ LDL  N     P+
Sbjct: 436 LSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPK 469



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
           D K +  L   + N   +K L +    +R + + +G L +L  L L +N L  +P  + Q
Sbjct: 23  DNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQ 82

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L +L  L L NN L  +P+ +  L +L+ L+L  N L  +P
Sbjct: 83  LENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLP 123


>gi|449530355|ref|XP_004172161.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 987

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 193/413 (46%), Gaps = 62/413 (15%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL- 59
           M K N++ +     F KM  LRLLK   +    +  + E +   ELR+  WH FPLK++ 
Sbjct: 389 MGKGNNKEKFRLEAFGKMRNLRLLKL--NYVHLIGSNFEHIISKELRWICWHGFPLKSIP 446

Query: 60  NILHWENLVSLKMPGSKVTQ--LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           +  +  NLV++ M  S +     W D Q L +LK ++L +S+ L K P+ +   NLE L 
Sbjct: 447 SSFYQGNLVAIDMRYSSLIHPWTWRDSQILENLKVLNLSHSEKLKKSPNFTKLPNLEQLK 506

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPK 176
           L  C++L+  H SI  L KL +++L  C +L+SLPTSI++ + L+  ++ GCS +  L  
Sbjct: 507 LKNCTALSSLHPSIGQLCKLHLINLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHD 566

Query: 177 MTSCHLRSTLPLLG--VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
               HL S   LL     I  +P SI  L  + +L +  C                    
Sbjct: 567 DLG-HLESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGC-------------------- 605

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE------SLPSGQCMFKSLTSL 288
                        +C   G+ S       L     PRP       +LPS      SLT L
Sbjct: 606 -------------NCR-SGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTEL 651

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYIS 347
            + +C N E LP ++G+L  L +L + G   +R L   L  L  L++L ++NC  LE+I 
Sbjct: 652 SLQNC-NLESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRLEFIQ 710

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
              F  K++ S   +NC +L   P++       S  ER P+ +L  N C+ LE
Sbjct: 711 E--FP-KNMRSFCATNCKSLVRTPDV-------SMFERAPNMILT-NCCALLE 752



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 26/250 (10%)

Query: 331 LLSKLELKNCSELEYI--SSSIFKLKSVESIEISNCSNLKGF-PEI-PFCNIDGSGIERI 386
           +L  L++ N S  E +  S +  KL ++E +++ NC+ L    P I   C +        
Sbjct: 475 ILENLKVLNLSHSEKLKKSPNFTKLPNLEQLKLKNCTALSSLHPSIGQLCKLH------- 527

Query: 387 PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
              ++ L  C+ L SLP+S+    SL +  I  C K+  L D+LG+LE+L  L  + T I
Sbjct: 528 ---LINLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLADRTAI 584

Query: 447 REVPKSLAQL-ALSKLKLKKCS------SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
             +P S+ +L  L+ L L  C+      S  SLP RL VS +L           + LP  
Sbjct: 585 SHIPFSIVKLKKLTDLSLCGCNCRSGSGSSASLPWRL-VSWALPRPN--QTCTALTLPSS 641

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLS 558
           +  L  L  L+++   +  +P  +G LS L+ L L  N NL+++   L  L  L  L + 
Sbjct: 642 LQGLSSLTELSLQNCNLESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVE 701

Query: 559 N-NNLERIPE 567
           N   LE I E
Sbjct: 702 NCGRLEFIQE 711



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 31/211 (14%)

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKK 465
           + ++L  L +   +KL++ P+    L  LE+L+++  T +  +  S+ QL  L  + L+ 
Sbjct: 475 ILENLKVLNLSHSEKLKKSPN-FTKLPNLEQLKLKNCTALSSLHPSIGQLCKLHLINLQN 533

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL-- 523
           C++  SLP+ +Y   SL +  I  C     L D++G+LE L  L    TAI  +P S+  
Sbjct: 534 CTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLADRTAISHIPFSIVK 593

Query: 524 ------------------GQLSSLEWLVLS--------DNNLQIIPESLNQLSSLVSLKL 557
                             G  +SL W ++S              +P SL  LSSL  L L
Sbjct: 594 LKKLTDLSLCGCNCRSGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTELSL 653

Query: 558 SNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
            N NLE +P  +  LS LK L+L  N   R+
Sbjct: 654 QNCNLESLPIDIGSLSELKKLNLGGNKNLRV 684



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 46/222 (20%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLE 289
           + PNL+ L++ +C      S   PS         + L+ C    SLP+      SL +  
Sbjct: 498 KLPNLEQLKLKNCT---ALSSLHPSIGQLCKLHLINLQNCTNLSSLPTSIYNLHSLQTFI 554

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC--------- 340
           I  C     L D+LG+L++L  L+ D TAI  +P  + +L  L+ L L  C         
Sbjct: 555 ISGCSKIHCLHDDLGHLESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGCNCRSGSGSS 614

Query: 341 SELEY------------------ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           + L +                  + SS+  L S+  + + NC NL+  P      ID   
Sbjct: 615 ASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTELSLQNC-NLESLP------IDIGS 667

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           +  +    L  NK   L  L + LC    L  L + +C +LE
Sbjct: 668 LSELKKLNLGGNK--NLRVLGTELCGLLKLNELNVENCGRLE 707


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 147/322 (45%), Gaps = 65/322 (20%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++E L++L + G+ I+E+P S
Sbjct: 1077 LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSS 1136

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            + +L  L  L L  C +  +LP  +    SL +L I  C    +LP+ +G L+ L++L +
Sbjct: 1137 IQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYV 1196

Query: 512  K------------------------GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
            K                           +RE+P  +  L+SL+ LVL  N    IP+ ++
Sbjct: 1197 KDFDSMNCQXPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGIS 1256

Query: 548  QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
            QL  L+ L LS+  L                      L  IPE   +  T +  + TSL+
Sbjct: 1257 QLHKLIVLNLSHCKL----------------------LQHIPEPPSNLXTLVAHQCTSLK 1294

Query: 608  LSVDLRNCLKLDPNELSEIIKDGWMK---QSVNGETYITKSMYFPGNEIPKWFRHQSTGS 664
            +S  L           S   K G  K        +T+I +S     N IP+W  HQ  GS
Sbjct: 1295 ISSSLL---------WSPFFKSGIQKFVPXXKXLDTFIPES-----NGIPEWISHQKKGS 1340

Query: 665  TISLKTPQPTGYN-KLMGFAFC 685
             I+L  PQ    N   +GFA C
Sbjct: 1341 KITLTLPQNWYENDDFLGFALC 1362



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 109/229 (47%), Gaps = 17/229 (7%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C   +SLPS  C FKSLT+L    C   E  P+ L +++ L +L + G+AI+E+P  
Sbjct: 1077 LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSS 1136

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            + +L  L  L L  C  L  +  SI  L S++++ I +C  LK  PE          + R
Sbjct: 1137 IQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPE---------NLGR 1187

Query: 386  IPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
            + S  +L +     +     SL    SL  L +I+C  L  +P  + +L +L+ L + G 
Sbjct: 1188 LQSLEILYVKDFDSMNCQXPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLMGN 1246

Query: 445  GIREVPKSLAQL-ALSKLKLKKCSSFESLPS-----RLYVSKSLTSLEI 487
                +P  ++QL  L  L L  C   + +P         V+   TSL+I
Sbjct: 1247 QFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLXTLVAHQCTSLKI 1295



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 113/249 (45%), Gaps = 42/249 (16%)

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL----KSVESIEISNCSNLKGF 370
           DG ++  LP         +    K+  EL    S+I +L    K    + + N S+    
Sbjct: 604 DGYSLESLP---------TNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHL 654

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            EIP    D S +  +   +L L  C KLE LP  +  +K L +L   DC KL+R P+  
Sbjct: 655 TEIP----DFSSVPNL--EILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIK 708

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           GN+  L EL + GT I E+P S              SSF  L       K+L  L    C
Sbjct: 709 GNMRKLRELDLSGTAIEELPSS--------------SSFGHL-------KALKILSFRGC 747

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
               ++P ++  L  L+VL +    I E  +P  + +LSSL  L L  N+ + IP ++N+
Sbjct: 748 SKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLXELNLKSNDFRSIPATINR 807

Query: 549 LSSLVSLKL 557
           LS L +L L
Sbjct: 808 LSRLQTLDL 816



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 12/214 (5%)

Query: 136  KLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  CK L SLP+SI   K L  L   GCS L++ P+ +    +   L L G  I
Sbjct: 1071 ELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAI 1130

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI+ L  + +L +  CK L N+  SI  L  L+++ I  CP L+  ++P  N+  
Sbjct: 1131 KEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELK--KLPE-NLGR 1187

Query: 254  TRSKE-QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             +S E     +     C  P SL SG C   SL  L +I+C     +P  + +L +L  L
Sbjct: 1188 LQSLEILYVKDFDSMNCQXP-SL-SGLC---SLRILRLINC-GLREIPSGICHLTSLQCL 1241

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            ++ G     +P+G+ QL  L  L L +C  L++I
Sbjct: 1242 VLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHI 1275



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 67/274 (24%)

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           SL SLPT+ H+K L  L+LRG SN+K L +    H                         
Sbjct: 607 SLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLH------------------------- 640

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
                    +L  I+ S        S+ +   P+  F  +P+  I            L L
Sbjct: 641 --------NKLNVINLS-------HSVHLTEIPD--FSSVPNLEI------------LTL 671

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP--E 324
           K C + E LP G   +K L +L   DC   +R P+  GN++ L  L + GTAI ELP   
Sbjct: 672 KGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSS 731

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
             G L  L  L  + CS+L  I + +  L S+E +++S C+ ++G      C +      
Sbjct: 732 SFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRL------ 785

Query: 385 RIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEI 417
              SS+ +LN K +   S+P+++     L +L++
Sbjct: 786 ---SSLXELNLKSNDFRSIPATINRLSRLQTLDL 816



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 134/342 (39%), Gaps = 85/342 (24%)

Query: 9   QINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEG-------------VPFTELRY 48
           Q    +F +M  LRLLK        C S+       L+G              P  EL Y
Sbjct: 544 QFTKESFKQMDRLRLLKIHKDDEYGCISR---FSRHLDGKLFSEDHLPRDFEFPSYELTY 600

Query: 49  FEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
           F W  + L++L    H ++LV L + GS + QLW   +    L  I+L +S  LT++PD 
Sbjct: 601 FHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDF 660

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLR 166
           S   NLEIL L  C              KLE            LP  I+  K+L+ L   
Sbjct: 661 SSVPNLEILTLKGCV-------------KLEC-----------LPRGIYKWKHLQTLSCG 696

Query: 167 GCSNLKNLPKMTSCHLRS--TLPLLGVGIEELP--SSIKCLSNIGELLIYSCKRLENISS 222
            CS LK  P++   ++R    L L G  IEELP  SS   L  +  L    C +L  I +
Sbjct: 697 DCSKLKRFPEIKG-NMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPT 755

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            +  L  LE            L++  CNI                       +PS  C  
Sbjct: 756 DVCCLSSLE-----------VLDLSYCNI-------------------MEGGIPSDICRL 785

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
            SL  L  +   +F  +P  +  L  L  L + G  +++L +
Sbjct: 786 SSLXELN-LKSNDFRSIPATINRLSRLQTLDLHGAFVQDLNQ 826



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 2/139 (1%)

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            E + ++E+P     L L  L L+ C   +SLPS +   KSLT+L    C      P+ + 
Sbjct: 1056 EDSDMKELPIIENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILE 1115

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL-SN 559
            ++E LK L + G+AI+E+P S+ +L  L+ L L+   NL  +PES+  L+SL +L + S 
Sbjct: 1116 DMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSC 1175

Query: 560  NNLERIPERLDPLSSLKYL 578
              L+++PE L  L SL+ L
Sbjct: 1176 PELKKLPENLGRLQSLEIL 1194



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 74/163 (45%), Gaps = 28/163 (17%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           + E+P   +   L  L LK C   E LP  +Y  K L +L   DC    R P+  GN+  
Sbjct: 654 LTEIPDFSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRK 713

Query: 506 LKVLTIKGTAIREVPES--LGQL------------------------SSLEWLVLSDNNL 539
           L+ L + GTAI E+P S   G L                        SSLE L LS  N+
Sbjct: 714 LRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNI 773

Query: 540 Q--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
               IP  + +LSSL  L L +N+   IP  ++ LS L+ LDL
Sbjct: 774 MEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSRLQTLDL 816



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 84   VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
            ++++  LK++DL  S +      +   + L+ L+L YC +L     SI  L  L+ L + 
Sbjct: 1114 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1173

Query: 144  RCKSLTSLP------TSIHSKYLKRLVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEEL 196
             C  L  LP       S+   Y+K      C      P ++  C LR  L L+  G+ E+
Sbjct: 1174 SCPELKKLPENLGRLQSLEILYVKDFDSMNC----QXPSLSGLCSLR-ILRLINCGLREI 1228

Query: 197  PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            PS I  L+++ + L+    +  +I   I +L  L  + +  C  LQ +  P  N+
Sbjct: 1229 PSGICHLTSL-QCLVLMGNQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNL 1282


>gi|168032883|ref|XP_001768947.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679859|gb|EDQ66301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 321

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 166/328 (50%), Gaps = 24/328 (7%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELE 344
           T+  I  C +   L +ELGNL++L    I   +++  LP   G L  L+  +++ CS L 
Sbjct: 1   TTFNIGRCSSLTSLSNELGNLKSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLT 60

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
            + + +  L S+ + ++S  S+L   P   F N+          +   +  CS L SLP+
Sbjct: 61  SLPNELGNLTSLTTFDLSGWSSLTSLPN-EFGNL-------TSLTTFNIQWCSSLTSLPN 112

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPKSLAQL-ALSKLK 462
            L    SLT+L +  C  L  LP+ELGNL +L  L +E  + +  +P  L  L +L+ + 
Sbjct: 113 ELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIID 172

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPE 521
           +  CSS  SLP+ L    SLT+ +I  C +   LP+E+GNL  L    I + +++   P 
Sbjct: 173 IGWCSSLTSLPNELDNLISLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSFPN 232

Query: 522 SLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD 579
            LG L+SL  L +   ++L  +P  L  L+SL +  LS  ++L  +P  L  L+SL  L+
Sbjct: 233 ELGNLTSLTTLEIQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNELSNLTSLTTLN 292

Query: 580 LFENNLDRIPEYLRSFPTSIPSEFTSLR 607
           +         EY  S  TS+P+E  +L 
Sbjct: 293 M---------EYCSSL-TSLPNELGNLT 310



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 152/322 (47%), Gaps = 28/322 (8%)

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSS 262
           I  C  L ++S+ +  L+ L +  I RC +L  L         + + +I    S     +
Sbjct: 5   IGRCSSLTSLSNELGNLKSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPN 64

Query: 263 EL---------KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
           EL          L       SLP+      SLT+  I  C +   LP+ELGNL +L  L 
Sbjct: 65  ELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFNIQWCSSLTSLPNELGNLTSLTTLN 124

Query: 314 ID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           ++  +++  LP  LG L  L+ L ++ CS L  + + +  L S+  I+I  CS+L   P 
Sbjct: 125 MEYCSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPN 184

Query: 373 IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
                +D      I  +   + +CS L SLP+ L    SLT+ +I  C  L   P+ELGN
Sbjct: 185 ----ELD----NLISLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSFPNELGN 236

Query: 433 LEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           L +L  L ++  + +  +P  L  L +L+   L   SS  SLP+ L    SLT+L +  C
Sbjct: 237 LTSLTTLEIQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNELSNLTSLTTLNMEYC 296

Query: 491 KNFMRLPDEIGNLEYLKVLTIK 512
            +   LP+E+GNL  L  L ++
Sbjct: 297 SSLTSLPNELGNLTSLTTLNME 318



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 168/381 (44%), Gaps = 69/381 (18%)

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP 175
           ++G CSSLT   + +  L  L   D+ RC SLTSLP    +   L    ++ CS+L +LP
Sbjct: 4   NIGRCSSLTSLSNELGNLKSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLP 63

Query: 176 -KMTSCHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            ++ +    +T  L G   +  LP+    L+++    I  C  L ++ + +  L  L ++
Sbjct: 64  NELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFNIQWCSSLTSLPNELGNLTSLTTL 123

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            +  C +L                                SLP+      SLT+L +  C
Sbjct: 124 NMEYCSSLT-------------------------------SLPNELGNLTSLTTLNMECC 152

Query: 294 PNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            +   LP+ELGNL +L  + I   +++  LP  L  L  L+  ++  CS L  + + +  
Sbjct: 153 SSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLISLTTFDIGRCSSLTSLPNELGN 212

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L S+ + +I  CS+L  FP                      N+   L SL          
Sbjct: 213 LTSLTTFDIGRCSSLTSFP----------------------NELGNLTSL---------- 240

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFE 470
           T+LEI  C  L  LP+ELGNL +L    + G + +  +P  L+ L +L+ L ++ CSS  
Sbjct: 241 TTLEIQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNELSNLTSLTTLNMEYCSSLT 300

Query: 471 SLPSRLYVSKSLTSLEIIDCK 491
           SLP+ L    SLT+L +  C 
Sbjct: 301 SLPNELGNLTSLTTLNMECCS 321



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 148/337 (43%), Gaps = 45/337 (13%)

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
           ++L   D+G CSSLT   +    L  L   D+  C SLTSLP                + 
Sbjct: 22  KSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLP----------------NE 65

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L NL  +T+  L          +  LP+    L+++    I  C  L ++ + +  L  L
Sbjct: 66  LGNLTSLTTFDLSG-----WSSLTSLPNEFGNLTSLTTFNIQWCSSLTSLPNELGNLTSL 120

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
            ++ +  C +L  L     N+    +       L ++ C     LP+      +LTSL I
Sbjct: 121 TTLNMEYCSSLTSLPNELGNLTSLTT-------LNMECCSSLTLLPN---ELGNLTSLTI 170

Query: 291 ID---CPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           ID   C +   LP+EL NL +L    I   +++  LP  LG L  L+  ++  CS L   
Sbjct: 171 IDIGWCSSLTSLPNELDNLISLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSF 230

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSS 405
            + +  L S+ ++EI  CS+L   P           +  + S +   L+  S L SLP+ 
Sbjct: 231 PNELGNLTSLTTLEIQWCSSLTSLPN---------ELGNLTSLTTFDLSGWSSLTSLPNE 281

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           L    SLT+L +  C  L  LP+ELGNL +L  L +E
Sbjct: 282 LSNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNME 318



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 31/319 (9%)

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           +   +  CS L  +S+ +  LKS+ + +I  CS+L   P   F N+          +   
Sbjct: 1   TTFNIGRCSSLTSLSNELGNLKSLTTFDIGRCSSLTSLPN-EFGNL-------TSLTTFD 52

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK 451
           +  CS L SLP+ L    SLT+ ++     L  LP+E GNL +L    ++  + +  +P 
Sbjct: 53  IQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFNIQWCSSLTSLPN 112

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            L  L +L+ L ++ CSS  SLP+ L    SLT+L +  C +   LP+E+GNL  L ++ 
Sbjct: 113 ELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIID 172

Query: 511 IKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           I   +++  +P  L  L SL    +   ++L  +P  L  L+SL +  +   ++L   P 
Sbjct: 173 IGWCSSLTSLPNELDNLISLTTFDIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSFPN 232

Query: 568 RLDPLSSLKYLDL-FENNLDRIPEYLRSFP-------------TSIPSEFTSLR--LSVD 611
            L  L+SL  L++ + ++L  +P  L +               TS+P+E ++L    +++
Sbjct: 233 ELGNLTSLTTLEIQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNELSNLTSLTTLN 292

Query: 612 LRNCLKLD--PNELSEIIK 628
           +  C  L   PNEL  +  
Sbjct: 293 MEYCSSLTSLPNELGNLTS 311



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 20/300 (6%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L ++  NL SL   D+++   LT LP+ L    +L   DL   SSLT   +    
Sbjct: 33  SSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNEFGN 92

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L   ++  C SLTSLP  + +   L  L +  CS+L +LP      L +   L  + 
Sbjct: 93  LTSLTTFNIQWCSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPN----ELGNLTSLTTLN 148

Query: 193 IE------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
           +E       LP+ +  L+++  + I  C  L ++ + +  L  L +  I RC +L  L  
Sbjct: 149 MECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLISLTTFDIGRCSSLTSLPN 208

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+    +         + +C    S P+      SLT+LEI  C +   LP+ELGNL
Sbjct: 209 ELGNLTSLTT-------FDIGRCSSLTSFPNELGNLTSLTTLEIQWCSSLTSLPNELGNL 261

Query: 307 QALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +L    + G +++  LP  L  L  L+ L ++ CS L  + + +  L S+ ++ +  CS
Sbjct: 262 TSLTTFDLSGWSSLTSLPNELSNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECCS 321


>gi|332330341|gb|AEE43927.1| TIR-NBS-LRR resistance protein muRdr1C [Rosa multiflora]
          Length = 1139

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 185/377 (49%), Gaps = 47/377 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N   FSKM EL+LL          +H+L    G  +    L++ +W  +P K+L  
Sbjct: 548 EADWNLEAFSKMCELKLL---------YIHNLRLSLGPKYLPNALKFLKWSWYPSKSLPP 598

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+  ++L +LK IDL  S  LT+ PD +   +LE L L  
Sbjct: 599 CFQPDELTELTLVHSNIDHLWNGKKSLGNLKSIDLSDSINLTRTPDFTGIPSLEKLILEG 658

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL + H SI  L +L+  +   CKS+ SLP  +  ++L+   + GCS LK +P+    
Sbjct: 659 CISLVKIHPSIASLKRLKFWNFRNCKSIKSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQ 718

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI                 E++S S+ +L  L  I I   P
Sbjct: 719 TKRLSRLCLGGTAVEKLPSSI-----------------EHLSESLVELD-LSGIVIREQP 760

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
             +FL+    N+  +      S  L  +K P P   L +    F SL +L++ DC   E 
Sbjct: 761 YSRFLKQ---NLIAS------SFGLFPRKSPHPLLPLLASLKHFSSLRTLKLNDCNLCEG 811

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G+L +L RL + G     LP  +  L+ L+   ++NC++L+ + +    +    
Sbjct: 812 EIPNDIGSLSSLKRLELRGNNFVSLPASIHLLSKLTYFGVENCTKLQQLPA--LPVSDYL 869

Query: 358 SIEISNCSNLKGFPEIP 374
           ++  +NC++L+ FP+ P
Sbjct: 870 NVLTNNCTSLQVFPDPP 886



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 223/514 (43%), Gaps = 94/514 (18%)

Query: 303  LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            LGNL++++  + D   +   P+  G +  L KL L+ C  L  I  SI  LK ++     
Sbjct: 625  LGNLKSID--LSDSINLTRTPDFTG-IPSLEKLILEGCISLVKIHPSIASLKRLKFWNFR 681

Query: 363  NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
            NC ++K  P      +D   +E        ++ CSKL+ +P  +   K L+ L  +    
Sbjct: 682  NCKSIKSLP----GEVDMEFLE-----TFDVSGCSKLKMIPEFVGQTKRLSRL-CLGGTA 731

Query: 423  LERLPDELGNL-EALEELRVEGTGIREVPKS--LAQ--LALSKLKLKKCSSFESLP--SR 475
            +E+LP  + +L E+L EL + G  IRE P S  L Q  +A S     + S    LP  + 
Sbjct: 732  VEKLPSSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSFGLFPRKSPHPLLPLLAS 791

Query: 476  LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
            L    SL +L++ DC           NL        +G    E+P  +G LSSL+ L L 
Sbjct: 792  LKHFSSLRTLKLNDC-----------NL-------CEG----EIPNDIGSLSSLKRLELR 829

Query: 536  DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
             NN   +P S++ LS L    + N   L+++P    P+S   YL++  NN       L+ 
Sbjct: 830  GNNFVSLPASIHLLSKLTYFGVENCTKLQQLPAL--PVSD--YLNVLTNNCTS----LQV 881

Query: 595  FPTSIPSEFTSL-RLSVDLRNCLK-LDPNELSEIIKDGWMK-------------QSVNGE 639
            FP   P + + L    +D  NCL   D +     +   W++             Q  N  
Sbjct: 882  FPD--PPDLSRLSEFFLDCSNCLSCQDSSYFLYSVLKRWIEIQVLSRCDMMVHMQETNRR 939

Query: 640  TYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHE 699
                     PG+EIP+WF +QS G  ++ K P     +K +GFA C ++           
Sbjct: 940  PLEFVDFVIPGSEIPEWFNNQSVGDRVTEKLPSDACNSKWIGFAVCALIV---------- 989

Query: 700  SVEDDRKCNLFDVVCDRRSEG----YDSYTSSYLGKISHVE---SDHVFLGS--SIFAGE 750
              +D+    L     D  + G    ++ Y   ++G +  V+   SDH++L    S F   
Sbjct: 990  -PQDNPSALLERPFLDPDTYGIECYWNDYGIGFVGLVVPVKQFVSDHLWLLVLLSPFRKP 1048

Query: 751  NSCKRSDEFFFHIDRSC-----CEVKKCGIHFVH 779
             +C   + F F I R+       +VKKCG+  ++
Sbjct: 1049 ENCLEVN-FVFEITRAVGNNRGMKVKKCGVRALY 1081


>gi|168035738|ref|XP_001770366.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678397|gb|EDQ64856.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 643

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 237/531 (44%), Gaps = 89/531 (16%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           CSSLT     +  L  L  LDL  C SL SLP  I +   L +L L  CS+L +LP    
Sbjct: 101 CSSLTSLQHELANLTSLIELDLSGCSSLISLPQKISNLSSLIKLDLSRCSSLTSLPH--- 157

Query: 180 CHLRSTLPLLGV------GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
             L++   L+ V       +  LP  +  LS++ +L +  C  L N+             
Sbjct: 158 -ELKNLSSLIKVYFMNWSSLTSLPKELANLSSLTKLNLTGCSSLTNMP------------ 204

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
             H   NL  L +                 L L +C R  SLP       SL  L++ +C
Sbjct: 205 --HELANLSSLTI-----------------LDLSECLRLTSLPYEITNLSSLIILDLNNC 245

Query: 294 PNFERLPDELGNLQALNRL-IIDGTAIRELPEGL------------------------GQ 328
            +   L  E+ NL +L ++ +++ +++  LP  L                          
Sbjct: 246 SSLTNLSYEIENLSSLTKVYLVNWSSLTNLPHELTNLSSLTILSLSRCSSLRSLLHEIAN 305

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
           L+ L++ +L  CS L  +S  +  L S+  + +S CS+L  FP           I  + S
Sbjct: 306 LSSLTEFDLNECSSLISLSHELINLSSLTKLYLSGCSSLTSFPH---------EITNLSS 356

Query: 389 -SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGI 446
             ++ L+ CS L SLP+ +    SLT L++ +C  L  LP E+ NL +L +L + G + +
Sbjct: 357 LRIVNLSDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPHEIANLSSLTKLDLRGCSSL 416

Query: 447 REVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             +   +  L +L KL L+ CSS  SLP  +    SLT  ++  C + + LP +I NL  
Sbjct: 417 TSLSHEITNLFSLIKLDLRGCSSLTSLPHEIAKFSSLTKFDLRTCSSLISLPHKIKNLSS 476

Query: 506 LKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNL 562
           L  L + G +++  +P  +  LSS+  L LS  ++L  +P+ L  LSSL    L+  +NL
Sbjct: 477 LTSLHLSGCSSLTSLPYEIINLSSMTKLDLSGYSSLTSLPKELANLSSLNLFNLNGCSNL 536

Query: 563 ERIPERLDPLSSLKYLDL-----FENNLDRIPE--YLRSFPTSIPSEFTSL 606
             +   +  LSSL  LDL       + L  I    YL+    S  S FTSL
Sbjct: 537 IILLHEIKNLSSLTKLDLSGCLSLASLLYEITNLSYLKWLKLSRYSNFTSL 587



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 209/475 (44%), Gaps = 29/475 (6%)

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSS 130
           M  S +T L  ++ NL SL +++L     LT +P +L+   +L ILDL  C  LT     
Sbjct: 171 MNWSSLTSLPKELANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSECLRLTSLPYE 230

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK--MTSCHLRSTLP 187
           I  L+ L +LDL+ C SLT+L   I +   L ++ L   S+L NLP        L     
Sbjct: 231 ITNLSSLIILDLNNCSSLTNLSYEIENLSSLTKVYLVNWSSLTNLPHELTNLSSLTILSL 290

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                +  L   I  LS++ E  +  C  L ++S  +  L  L  + +  C +L      
Sbjct: 291 SRCSSLRSLLHEIANLSSLTEFDLNECSSLISLSHELINLSSLTKLYLSGCSSLTSFPHE 350

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+   R        + L  C    SLP+      SLT L++ +C     LP E+ NL 
Sbjct: 351 ITNLSSLR-------IVNLSDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPHEIANLS 403

Query: 308 ALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +L +L + G +++  L   +  L  L KL+L+ CS L  +   I K  S+   ++  CS+
Sbjct: 404 SLTKLDLRGCSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHEIAKFSSLTKFDLRTCSS 463

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L   P      I                 CS L SLP  +    S+T L++     L  L
Sbjct: 464 LISLPH----KIKNLSSLTSLHLS----GCSSLTSLPYEIINLSSMTKLDLSGYSSLTSL 515

Query: 427 PDELGNLEALEELRVEGTG-----IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
           P EL NL +L    + G       + E+ K+L+  +L+KL L  C S  SL   +     
Sbjct: 516 PKELANLSSLNLFNLNGCSNLIILLHEI-KNLS--SLTKLDLSGCLSLASLLYEITNLSY 572

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS 535
           L  L++    NF  L  EI NL  LK L +K  ++   +   +  LSSL+ L LS
Sbjct: 573 LKWLKLSRYSNFTSLSHEISNLSSLKWLNLKRCSSFISLLHKIANLSSLKILDLS 627



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 14/285 (4%)

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           +DG   + LP+ +  L  LS L L++ S L+ IS  +  L S+ S+++S C++L      
Sbjct: 3   LDGIEFKVLPKAIKNLKSLSNLSLQSNSNLKIISDKLTNLYSLTSLDLSGCTSLTSLVH- 61

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
                          + L L+ CS L SL   L    SLTSL +  C  L  L  EL NL
Sbjct: 62  -------ELANLSSLTSLNLSGCSSLRSLSKKLANLSSLTSLNLSKCSSLTSLQHELANL 114

Query: 434 EALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            +L EL + G + +  +P+ ++ L +L KL L +CSS  SLP  L    SL  +  ++  
Sbjct: 115 TSLIELDLSGCSSLISLPQKISNLSSLIKLDLSRCSSLTSLPHELKNLSSLIKVYFMNWS 174

Query: 492 NFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQL 549
           +   LP E+ NL  L  L + G +++  +P  L  LSSL  L LS+   L  +P  +  L
Sbjct: 175 SLTSLPKELANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSECLRLTSLPYEITNL 234

Query: 550 SSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYL 592
           SSL+ L L+N ++L  +   ++ LSSL  + L   ++L  +P  L
Sbjct: 235 SSLIILDLNNCSSLTNLSYEIENLSSLTKVYLVNWSSLTNLPHEL 279



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 12/259 (4%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
           LP      KSL++L +    N + + D+L NL +L  L + G T++  L   L  L+ L+
Sbjct: 11  LPKAIKNLKSLSNLSLQSNSNLKIISDKLTNLYSLTSLDLSGCTSLTSLVHELANLSSLT 70

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L L  CS L  +S  +  L S+ S+ +S CS+L         N+  S IE      L L
Sbjct: 71  SLNLSGCSSLRSLSKKLANLSSLTSLNLSKCSSLTSLQH-ELANL-TSLIE------LDL 122

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR-VEGTGIREVPKS 452
           + CS L SLP  +    SL  L++  C  L  LP EL NL +L ++  +  + +  +PK 
Sbjct: 123 SGCSSLISLPQKISNLSSLIKLDLSRCSSLTSLPHELKNLSSLIKVYFMNWSSLTSLPKE 182

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           LA L +L+KL L  CSS  ++P  L    SLT L++ +C     LP EI NL  L +L +
Sbjct: 183 LANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSECLRLTSLPYEITNLSSLIILDL 242

Query: 512 KG-TAIREVPESLGQLSSL 529
              +++  +   +  LSSL
Sbjct: 243 NNCSSLTNLSYEIENLSSL 261



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 142/315 (45%), Gaps = 42/315 (13%)

Query: 66  NLVSLKMPG----SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGY 120
           NL SL++      S +T L +++ NL SL ++DL    +LT LP +++   +L  LDL  
Sbjct: 353 NLSSLRIVNLSDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPHEIANLSSLTKLDLRG 412

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY--LKRLVLRGCSNLKNLP-KM 177
           CSSLT     I  L  L  LDL  C SLTSLP  I +K+  L +  LR CS+L +LP K+
Sbjct: 413 CSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHEI-AKFSSLTKFDLRTCSSLISLPHKI 471

Query: 178 TSCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
            +    ++L L G   +  LP  I  LS++ +L +     L ++   +  L  L    ++
Sbjct: 472 KNLSSLTSLHLSGCSSLTSLPYEIINLSSMTKLDLSGYSSLTSLPKELANLSSLNLFNLN 531

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
            C NL  L     N+                                SLT L++  C + 
Sbjct: 532 GCSNLIILLHEIKNLS-------------------------------SLTKLDLSGCLSL 560

Query: 297 ERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             L  E+ NL  L  L +   +    L   +  L+ L  L LK CS    +   I  L S
Sbjct: 561 ASLLYEITNLSYLKWLKLSRYSNFTSLSHEISNLSSLKWLNLKRCSSFISLLHKIANLSS 620

Query: 356 VESIEISNCSNLKGF 370
           ++ +++S CS+LK  
Sbjct: 621 LKILDLSRCSSLKNL 635


>gi|227438189|gb|ACP30584.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 980

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 227/503 (45%), Gaps = 70/503 (13%)

Query: 3   KINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI- 61
           KI  E+ ++   F  M+ L+ L+  G      +         +LR   W  FP+      
Sbjct: 378 KIEEELDVSEKAFDGMSNLQFLQVNGYGAPLQLTRGLNYLSHKLRLLHWSHFPMSCFPCN 437

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           ++ E LV L M GSK+ +LW+ ++ L SLK +DL  S  L +LP+LS A NLE L L  C
Sbjct: 438 VNLEFLVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNLKELPNLSTATNLEKLYLRNC 497

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            SL +        N +E LD+  C SL   P+ + ++  L +L L    NL  LP     
Sbjct: 498 WSLIKLPCLPG--NSMEELDIGGCSSLVQFPSFTGNAVNLLKLNLVSFPNLVELPSYVGN 555

Query: 181 HLRSTLPLLGVG----IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
              + L  L +     + ELP S   L  +  L++  C +LEN  ++I  L+FL  + + 
Sbjct: 556 --ATNLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFPNNI-TLEFLNDLDLA 612

Query: 237 RCPNLQFLEMPS-CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
            C +L      +  N+   ++       L L   P+   +PS      +L  L + +C N
Sbjct: 613 GCSSLDLSGFSTIVNVVNLQT-------LNLSSLPQLLEVPSFIGNATNLEDLILSNCSN 665

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              LP  +GNLQ L RL ++G                       CS+LE + ++I  L+S
Sbjct: 666 LVELPLFIGNLQKLKRLRLEG-----------------------CSKLEVLPTNI-NLES 701

Query: 356 VESIEISNCSNLKGFPEIPF----CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
           +  + +++CS LK FPEI        + G+ IE++P S+                   +S
Sbjct: 702 LFELNLNDCSMLKHFPEISTYIRNLYLIGTAIEQVPPSI-------------------RS 742

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
            + L+ +     E L      LE +  + +  T I+E+P  + +++ LS   LK C    
Sbjct: 743 WSRLDELKMSYFENLKGFPHALERITCMCLTDTEIQELPPWVKKISRLSVFVLKGCRKLV 802

Query: 471 SLPSRLYVSKSLTSLEIIDCKNF 493
           +LP+   +S+S+  ++  DCK+ 
Sbjct: 803 TLPA---ISESIRYMDASDCKSL 822



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 200/463 (43%), Gaps = 76/463 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
           EL +  C      PS      +L  L ++  PN   LP  +GN   L  L +   + + E
Sbjct: 513 ELDIGGCSSLVQFPSFTGNAVNLLKLNLVSFPNLVELPSYVGNATNLENLNLSNCSHLVE 572

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS--NLKGFPEIPFCNID 379
           LP   G L  L  L LK CS+LE   ++I  L+ +  ++++ CS  +L GF  I      
Sbjct: 573 LPLSFGNLQKLQTLILKGCSKLENFPNNI-TLEFLNDLDLAGCSSLDLSGFSTI------ 625

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              +  +    L L+   +L  +PS +    +L  L + +C  L  LP  +GNL+ L+ L
Sbjct: 626 ---VNVVNLQTLNLSSLPQLLEVPSFIGNATNLEDLILSNCSNLVELPLFIGNLQKLKRL 682

Query: 440 RVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           R+EG                      CS  E LP+ + + +SL  L + DC      P E
Sbjct: 683 RLEG----------------------CSKLEVLPTNINL-ESLFELNLNDCSMLKHFP-E 718

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
           I    Y++ L + GTAI +VP S+   S L+ L +S   NL+  P +L +++ +    L+
Sbjct: 719 IST--YIRNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKGFPHALERITCMC---LT 773

Query: 559 NNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLRSFPTS-------IPSEFTSLR 607
           +  ++ +P  +  +S L    L        L  I E +R    S       +   F +  
Sbjct: 774 DTEIQELPPWVKKISRLSVFVLKGCRKLVTLPAISESIRYMDASDCKSLEILECSFHNQY 833

Query: 608 LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--- 664
           L+++  NC KL     + II++              +    PG ++P  F H++TG+   
Sbjct: 834 LTLNFANCFKLSQEARNLIIQNS------------CRYAVLPGGQVPPHFTHRATGAGPL 881

Query: 665 TISL-KTPQPTGYNKLMGFAFCVVVACSVSE--CCRHESVEDD 704
           TI L + P P    K M F  C+++   V    C    S+E D
Sbjct: 882 TIKLNEKPLP----KYMIFKACILLVYKVDHDACSEENSMEVD 920


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 18/288 (6%)

Query: 7   EIQINPYTFSKMTELRLLKF----------CGSK-NKCMVHSLEGVPF--TELRYFEWHQ 53
           EI      F  M++LRLL            C S+  +C VH  +   F   ELR+  W +
Sbjct: 543 EICFTTEAFGNMSKLRLLAIHESSLSDDSECSSRLMQCQVHISDDFKFHYDELRFLLWEE 602

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           +PLK+L +    +NLV L M  S +T+LW+  +   +LK IDL  SK L + PD S   N
Sbjct: 603 YPLKSLPSDFKSQNLVYLSMTKSHLTRLWEGNKVFKNLKYIDLSDSKYLAETPDFSRVTN 662

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L++L    C+ L + HSS+  L+KL  L+   C +L   P       L+ L L GCS L+
Sbjct: 663 LKMLSFEGCTQLHKIHSSLGDLDKLCRLNFKNCINLEHFPGLDQLVSLEALNLSGCSKLE 722

Query: 173 NLPKMTS-CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
             P ++   H  S L   G  I ELPSSI   + +  L + +C++L ++ SSI KL  LE
Sbjct: 723 KFPVISQPMHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLE 782

Query: 232 SIRIHRCPNLQFLEMPSCNIDG-TRSKEQPSS--ELKLKKCPRPESLP 276
           ++ +  C  L   ++ S N+D   R  ++ S   EL+L+ C    +LP
Sbjct: 783 TLSLSGCSRLGKPQVNSDNLDALPRILDRLSHLRELQLQDCRSLRALP 830



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 111/238 (46%), Gaps = 40/238 (16%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
           L  G  +FK+L  +++ D       PD    +  L  L  +G T + ++   LG L  L 
Sbjct: 630 LWEGNKVFKNLKYIDLSDSKYLAETPD-FSRVTNLKMLSFEGCTQLHKIHSSLGDLDKLC 688

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGIER 385
           +L  KNC  LE+    + +L S+E++ +S CS L+ FP I          C  DG+ I  
Sbjct: 689 RLNFKNCINLEHFPG-LDQLVSLEALNLSGCSKLEKFPVISQPMHCLSKLC-FDGTAITE 746

Query: 386 IPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           +PSS        VL L  C KL SLPSS+C    L +L +  C +L +      NL+AL 
Sbjct: 747 LPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCSRLGKPQVNSDNLDAL- 805

Query: 438 ELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP------SRLYVSKSLTSLEII 488
                       P+ L +L+ L +L+L+ C S  +LP        +  S + TSLE I
Sbjct: 806 ------------PRILDRLSHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYI 851



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 195/487 (40%), Gaps = 113/487 (23%)

Query: 315  DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            D   + E P+   ++  L  L  + C++L  I SS+  L  +  +   NC NL+ FP   
Sbjct: 647  DSKYLAETPD-FSRVTNLKMLSFEGCTQLHKIHSSLGDLDKLCRLNFKNCINLEHFP--- 702

Query: 375  FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
                   G++++ S                       L +L +  C KLE+ P     + 
Sbjct: 703  -------GLDQLVS-----------------------LEALNLSGCSKLEKFPVISQPMH 732

Query: 435  ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
             L +L  +GT I E+P S+A                      Y +K L  L++ +C+  +
Sbjct: 733  CLSKLCFDGTAITELPSSIA----------------------YATK-LVVLDLQNCEKLL 769

Query: 495  RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
             LP  I  L +L+ L++ G +    P+            ++ +NL  +P  L++LS L  
Sbjct: 770  SLPSSICKLAHLETLSLSGCSRLGKPQ------------VNSDNLDALPRILDRLSHLRE 817

Query: 555  LKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR 613
            L+L +  +L  +P    PL S   L    +N   + EY+   P S+   F     S+   
Sbjct: 818  LQLQDCRSLRALP----PLPSSMELINASDNCTSL-EYIS--PQSV---FLCFGGSI-FG 866

Query: 614  NCLKLDPNE----------LSEIIKDGWMKQSVNGETY----ITKSMYFPGNEIPKWFRH 659
            NC +L   +           +   +D W  +S   + Y    +  S  FPG+ IP WF H
Sbjct: 867  NCFQLTKYQSKMGPHLRRMATHFDQDRW--KSAYDQQYPNVQVPFSTVFPGSTIPDWFMH 924

Query: 660  QSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDDRKCN--LFDVVCDR 716
             S G  + +    P  Y+   +GFA   V+A       R  S      CN  L D+  + 
Sbjct: 925  YSKGHEVDIDV-DPDWYDSSFLGFALSAVIAPKDGSITRGWST----YCNLDLHDLNSES 979

Query: 717  RSEGYDSYTSSYLG------KISHVESDHVFLGS-SIFAGENSCKRSD-EFFFHIDRSCC 768
             SE   S+  S+        + + + SDH++L     F G N  K S  +F F   R  C
Sbjct: 980  ESESESSWVCSFTDARTCQLEDTTINSDHLWLAYVPSFLGFNDKKWSRIKFSFSTSRKSC 1039

Query: 769  EVKKCGI 775
             VK  G+
Sbjct: 1040 IVKHWGV 1046



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 27/201 (13%)

Query: 231 ESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           E+    R  NL+ L    C     I  +         L  K C   E  P G     SL 
Sbjct: 653 ETPDFSRVTNLKMLSFEGCTQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLE 711

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           +L +  C   E+ P     +  L++L  DGTAI ELP  +     L  L+L+NC +L  +
Sbjct: 712 ALNLSGCSKLEKFPVISQPMHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSL 771

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
            SSI KL  +E++ +S CS L G P++   N+D                     +LP  L
Sbjct: 772 PSSICKLAHLETLSLSGCSRL-GKPQVNSDNLD---------------------ALPRIL 809

Query: 407 CMFKSLTSLEIIDCKKLERLP 427
                L  L++ DC+ L  LP
Sbjct: 810 DRLSHLRELQLQDCRSLRALP 830


>gi|359493485|ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 222/515 (43%), Gaps = 97/515 (18%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--------GSGI 383
           L ++ L  C+ L  +  SI  LK +    +  CS L+ FPE+   N++        G+ I
Sbjct: 322 LRRIILNGCTSLVKLHPSIGALKELIFPNLEGCSKLEKFPEVVQGNLENLSRISFEGTAI 381

Query: 384 ERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
             +PSS+        L L  C KL SLP S+C   SL +L +  C KL++LPD+LG L+ 
Sbjct: 382 RELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 441

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           L EL V+GTGI+EV  S+  L  L  L L  C    S    L   +S  +         +
Sbjct: 442 LAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAP-------L 494

Query: 495 RLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +LP  +  L  LK L +    + E  +P  L  LSSLE L L  N+   +P SL++LS L
Sbjct: 495 QLP-FLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPASLSRLSRL 553

Query: 553 VSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
             L L +  +L  +PE     SS++YL+     +L    E L    ++  S+   LR   
Sbjct: 554 KRLTLEHCKSLRSLPEL---PSSIEYLNAHSCASL----ETLSCSSSTYTSKLGDLRF-- 604

Query: 611 DLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY------------------FPGNE 652
           +  NC +L  N+ S+I+      +++   T +  SM                     G+ 
Sbjct: 605 NFTNCFRLGENQGSDIV------ETILEGTQLASSMAKLLEPDERSLLQHGYQALVQGSR 658

Query: 653 IPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFD 711
           IPKWF H+S GS +  + P P  YN KLMG A CVV     +          D     F 
Sbjct: 659 IPKWFTHRSEGSKVIAELP-PHWYNTKLMGLAACVVFNFKGAV---------DGYLGTFP 708

Query: 712 VVC--DRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFA----------GENSCKRSDEF 759
           + C  D        + S +   I  +ESDH +      A          GE S      F
Sbjct: 709 LACFLDGHYATLSDHNSLWTSSI--IESDHTWFAYISRAELEAPYPPWFGELSDYMLASF 766

Query: 760 FFHIDRSCC----------EVKKCGIHFVHAQRQR 784
            F +               EVKKCG+  V+ +  +
Sbjct: 767 LFLVPEGAVTSDDEVTSHGEVKKCGVRIVYEEDGK 801



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 170/363 (46%), Gaps = 62/363 (17%)

Query: 42  PFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
           P   LR   WH +PLK+L +  H E LV L M  S + QLW+  +    LK I L +S+ 
Sbjct: 250 PSNNLRSLHWHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWEGKKAFKKLKFIKLSHSQH 309

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
           LTK PD S A  L  + L  C+SL + H SI  L +L   +L+ C  L   P        
Sbjct: 310 LTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFPNLEGCSKLEKFPE------- 362

Query: 161 KRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
              V++G  NL+NL +++           G  I ELPSSI  L+ +  L + +C++L ++
Sbjct: 363 ---VVQG--NLENLSRIS---------FEGTAIRELPSSIGSLNRLVLLNLRNCEKLASL 408

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLE--------MPSCNIDGTRSKEQPSS--------EL 264
             SI +L  L+++ +  C  L+ L         +   N+DGT  KE  SS         L
Sbjct: 409 PQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEAL 468

Query: 265 KLKKC-----------------PRPESLPSGQCMFKSLTSLEIIDCPNFE-RLPDELGNL 306
            L  C                   P  LP    ++ SL SL + DC   E  LP +L +L
Sbjct: 469 SLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLY-SLKSLNLSDCNLLEGALPTDLSSL 527

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL-KSVESIEISNCS 365
            +L  L +D  +   LP  L +L+ L +L L++C  L     S+ +L  S+E +   +C+
Sbjct: 528 SSLENLYLDKNSFITLPASLSRLSRLKRLTLEHCKSLR----SLPELPSSIEYLNAHSCA 583

Query: 366 NLK 368
           +L+
Sbjct: 584 SLE 586



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 39/237 (16%)

Query: 293 CPNFERLPDEL-GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C   E+ P+ + GNL+ L+R+  +GTAIRELP  +G L  L  L L+NC +L  +  SI 
Sbjct: 354 CSKLEKFPEVVQGNLENLSRISFEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSIC 413

Query: 352 KLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSV--------LKLNKC 396
           +L S++++ +S CS LK  P+       +   N+DG+GI+ + SS+        L L  C
Sbjct: 414 ELISLQTLTLSGCSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGC 473

Query: 397 SKLESLPSSLCMFK----------------SLTSLEIIDCKKLE-RLPDELGNLEALEEL 439
               S   +L  F+                SL SL + DC  LE  LP +L +L +LE L
Sbjct: 474 KGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENL 533

Query: 440 RVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP----SRLYV-SKSLTSLEIIDC 490
            ++      +P SL++L+ L +L L+ C S  SLP    S  Y+ + S  SLE + C
Sbjct: 534 YLDKNSFITLPASLSRLSRLKRLTLEHCKSLRSLPELPSSIEYLNAHSCASLETLSC 590


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 6/238 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E Q N   FSKM+ LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 586 EAQWNMEAFSKMSRLRLLKI---NNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPASLQVD 641

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ ++LK I+L  S  L+K P+L+   NLE L L  C+SL+
Sbjct: 642 ELVELHMANSSIEQLWYGCKSAINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLS 701

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+    KL+ ++L  CKS+  LP ++  + LK   L GCS L+  P +  + +   
Sbjct: 702 EVHPSLALHKKLQHVNLVNCKSIRILPNNLEMESLKVCTLDGCSKLEKFPDIIGNMNCLM 761

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
            L L    I +LPSSI  L  +G L + SCK LE+I SSI  L+ L+ + +  C  L+
Sbjct: 762 VLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELK 819



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 144/329 (43%), Gaps = 65/329 (19%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           L  L L+ C+S   +   L + K L  + +++CK+   LP+ +  +E LKV T+ G + +
Sbjct: 689 LESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNL-EMESLKVCTLDGCSKL 747

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
            + P+ +G ++ L  L L + ++  +P S++ L  L  L +++  NLE IP  +  L SL
Sbjct: 748 EKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSL 807

Query: 576 KYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
           K LDL   + L  IPE L    +    EF  L            +P       + G+   
Sbjct: 808 KKLDLSGCSELKCIPENLGKVESL--EEFDGLS-----------NP-------RPGF--- 844

Query: 635 SVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSE 694
                      +  PGNEIP WF H+S GS+IS++ P        MGF  CV        
Sbjct: 845 ----------GIAVPGNEIPGWFNHRSKGSSISVQVPSGR-----MGFFACVAFNA---- 885

Query: 695 CCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY-LGKISHVESDHVFLGSSIF------ 747
                   +D   +LF   C  ++ G ++Y S   +    H+ SDH++L    F      
Sbjct: 886 --------NDESPSLF---CHFKANGRENYPSPMCINFEGHLFSDHIWLFYLSFDYLKEL 934

Query: 748 -AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
              ++    + E  FH      +V  CG+
Sbjct: 935 QEWQHESFSNIELSFHSYEQGVKVNNCGV 963



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 21/176 (11%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L+II+  N     + P+ L  +  L  LI++G T++ E+   L     L  + L 
Sbjct: 661 KSAINLKIINLSNSLNLSKTPN-LTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLV 719

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV- 390
           NC  +  + +++ +++S++   +  CS L+ FP+I           +D + I ++PSS+ 
Sbjct: 720 NCKSIRILPNNL-EMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIH 778

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                  L +N C  LES+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE 
Sbjct: 779 HLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEF 834



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 19/177 (10%)

Query: 208 ELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS- 261
           E L Y CK     ++ N+S+S   L   ++  +   PNL+ L +  C    + S+  PS 
Sbjct: 654 EQLWYGCKSAINLKIINLSNS---LNLSKTPNLTGIPNLESLILEGCT---SLSEVHPSL 707

Query: 262 ------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                   + L  C     LP+   M +SL    +  C   E+ PD +GN+  L  L +D
Sbjct: 708 ALHKKLQHVNLVNCKSIRILPNNLEM-ESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLD 766

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            T+I +LP  +  L  L  L + +C  LE I SSI  LKS++ +++S CS LK  PE
Sbjct: 767 ETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPE 823


>gi|10177889|dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 156/319 (48%), Gaps = 24/319 (7%)

Query: 13  YTFSKMTELRLLKFCGS------KNKCMVHSLEGV--PFTELRYFEWHQFPLKTL-NILH 63
           + F+ M +LR LK   +      ++   ++  EG+  P  E+RY  W +FPLK +    +
Sbjct: 579 HAFAMMRDLRYLKIYSTHCPQECESDIKLNFPEGLLLPLNEVRYLHWLKFPLKEVPQDFN 638

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             NLV LK+P S++ ++W+D ++   LK ++L +SK L  L  L  AQNL+ L+L  C++
Sbjct: 639 PGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLAGLGKAQNLQELNLEGCTA 698

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E H  ++ +  L  L+L  C SL SLP  I    LK L+L GCS  K   ++ S  L 
Sbjct: 699 LKEMHVDMENMKFLVFLNLRGCTSLKSLP-EIQLISLKTLILSGCSKFKTF-QVISDKLE 756

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           + L L G  I+ELP  I  L  +  L +  CK+L+ +  S+ +L+ LE + +  C  L  
Sbjct: 757 A-LYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNE 815

Query: 244 LEMPSCN--------IDGTRSKEQPS----SELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                 N        +D T  K+ P       L L K  +   LP     F  L  L + 
Sbjct: 816 FPETWGNMSRLEILLLDETAIKDMPKILSVRRLCLNKNEKISRLPDLLNKFSQLQWLHLK 875

Query: 292 DCPNFERLPDELGNLQALN 310
            C N   +P    NLQ LN
Sbjct: 876 YCKNLTHVPQLPPNLQYLN 894



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 197/440 (44%), Gaps = 78/440 (17%)

Query: 325  GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
            GLG+   L +L L+ C+ L+ +   +  +K +  + +  C++LK  PEI   ++      
Sbjct: 681  GLGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISL------ 734

Query: 385  RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
                  L L+ CSK ++              ++I  K              LE L ++GT
Sbjct: 735  ----KTLILSGCSKFKTF-------------QVISDK--------------LEALYLDGT 763

Query: 445  GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I+E+P  + +L  L  L +K C   + LP  L   K+L  L +  C      P+  GN+
Sbjct: 764  AIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETWGNM 823

Query: 504  EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NN 561
              L++L +  TAI+++P+ L    S+  L L+ N  +  +P+ LN+ S L  L L    N
Sbjct: 824  SRLEILLLDETAIKDMPKIL----SVRRLCLNKNEKISRLPDLLNKFSQLQWLHLKYCKN 879

Query: 562  LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPN 621
            L  +P+ L P  +L+YL++  +    +    +    SIP     +  S    NC +L+  
Sbjct: 880  LTHVPQ-LPP--NLQYLNV--HGCSSLKTVAKPLVCSIP--MKHVNSSFIFTNCNELEQA 932

Query: 622  ELSEIIKDGWMKQSVNG-------ETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTP 671
               EI+     K  +         E+ + + ++   FPG E+P WF H + GS +  + P
Sbjct: 933  AKEEIVVYAERKCHLLASALKRCDESCVPEILFCTSFPGCEMPSWFSHDAIGSMVEFELP 992

Query: 672  QPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRS-EGYDSYTSSYLG 730
                +N+L G A CVVV  S   C  H ++       +    C++ + EG  S  +  +G
Sbjct: 993  PHWNHNRLSGIALCVVV--SFKNCKSHANL-------IVKFSCEQNNGEGSSSSITWKVG 1043

Query: 731  KI-------SHVESDHVFLG 743
             +         VESDHVF+G
Sbjct: 1044 SLIEQDNQEETVESDHVFIG 1063



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 18/219 (8%)

Query: 303 LGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           LG  Q L  L ++G TA++E+   +  +  L  L L+ C+ L+ +     +L S++++ +
Sbjct: 682 LGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPE--IQLISLKTLIL 739

Query: 362 SNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMF 409
           S CS  K F     ++    +DG+ I+ +P  + +L +        C KL+ LP SL   
Sbjct: 740 SGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQL 799

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
           K+L  L +  C KL   P+  GN+  LE L ++ T I+++PK    L++ +L L K    
Sbjct: 800 KALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKI---LSVRRLCLNKNEKI 856

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
             LP  L     L  L +  CKN   +P    NL+YL V
Sbjct: 857 SRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNV 895



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 16/184 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   +SLP  Q +  SL +L +  C  F+        L+AL    +DGTAI+ELP
Sbjct: 715 LNLRGCTSLKSLPEIQLI--SLKTLILSGCSKFKTFQVISDKLEAL---YLDGTAIKELP 769

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFC 376
             +G+L  L  L +K C +L+ +  S+ +LK++E + +S CS L  FPE       +   
Sbjct: 770 CDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEIL 829

Query: 377 NIDGSGIERIPSSV----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            +D + I+ +P  +    L LNK  K+  LP  L  F  L  L +  CK L  +P    N
Sbjct: 830 LLDETAIKDMPKILSVRRLCLNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPN 889

Query: 433 LEAL 436
           L+ L
Sbjct: 890 LQYL 893


>gi|108738478|gb|ABG00772.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738524|gb|ABG00795.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 238/517 (46%), Gaps = 75/517 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+            E L 
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS-------NLMVLEMLK 414

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR---EVPESLGQLSSLE 530
             L+           +   F+ +P+    L  LK+  +   + R   ++P+ L +LSS+ 
Sbjct: 415 KPLFRISESNVPGTSEEPRFVEVPNSFSKL--LKLEELDACSWRISGKIPDDLEKLSSMR 472

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            L L +N    +P SL +LS+L  L L +   L+R+P
Sbjct: 473 ILNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLP 509



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDDT-ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+    L      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSSMRILNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L Q   
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPWKLEQ--- 517

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
             L L+ C S ES+ S L   K L  L + +C   + +P
Sbjct: 518 --LNLENCFSLESI-SDLSNLKILEDLNLTNCAKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|147851963|emb|CAN81250.1| hypothetical protein VITISV_002336 [Vitis vinifera]
          Length = 482

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 4   INSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWHQFP 55
           I   I I   +F  +  LRLLK          G  +K  +      P  ELRY  W  +P
Sbjct: 92  IPKPIHITTESFVMLKNLRLLKIYSDHEFASMGKHSKVKLSKDFEFPSYELRYLYWQGYP 151

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           L++L +  + E+LV L M  S + QLW+    L  L  I L   + L ++PD+S+     
Sbjct: 152 LESLPSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQRLIEIPDISV----- 206

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
                        H SI  L+KL +L+L  CK L+S P+ I  + L+ L L GCS LK  
Sbjct: 207 -------------HPSIGKLSKLILLNLKNCKKLSSFPSIIDMEALEILNLSGCSELKKF 253

Query: 175 PKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           P +     HL   L L    IEELPSSI+ L+ +  L + SC +LEN    + +++ L+ 
Sbjct: 254 PDIQGNMEHLLE-LYLASTAIEELPSSIEHLTGLVLLDLKSCSKLENFPEMMKEMENLKE 312

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKS 284
           +         FL       DGT  +  PSS         L L+ C    SLP G C   S
Sbjct: 313 L---------FL-------DGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCTLTS 356

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
           L +L +  C      P  LG+LQ L +   +GTAI + P+ +
Sbjct: 357 LETLIVSGCSQLNNFPKNLGSLQHLAQPHANGTAITQPPDSI 398



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 30/283 (10%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
           G  +E LPSS      +   + YS   L+ +  S   L+ L +IR+  C  L  +E+P  
Sbjct: 149 GYPLESLPSSFYAEDLVELDMCYSS--LKQLWESDMLLEKLNTIRLSCCQRL--IEIPDI 204

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           ++  +  K      L LK C +  S PS   M ++L  L +  C   ++ PD  GN++ L
Sbjct: 205 SVHPSIGKLSKLILLNLKNCKKLSSFPSIIDM-EALEILNLSGCSELKKFPDIQGNMEHL 263

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
             L +  TAI ELP  +  L  L  L+LK+CS+LE     + ++++++ +          
Sbjct: 264 LELYLASTAIEELPSSIEHLTGLVLLDLKSCSKLENFPEMMKEMENLKEL---------- 313

Query: 370 FPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
                   +DG+ IE +PSS+        L L  C  L SLP  +C   SL +L +  C 
Sbjct: 314 -------FLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCS 366

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
           +L   P  LG+L+ L +    GT I + P S+  L   K K++
Sbjct: 367 QLNNFPKNLGSLQHLAQPHANGTAITQPPDSIVLLRNLKAKIE 409



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 11/206 (5%)

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           +G+L+ L  L LKNC +L    S I  ++++E + +S CS LK FP+I         +E 
Sbjct: 210 IGKLSKLILLNLKNCKKLSSFPS-IIDMEALEILNLSGCSELKKFPDI------QGNMEH 262

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           +    L     + +E LPSS+     L  L++  C KLE  P+ +  +E L+EL ++GT 
Sbjct: 263 LLELYLA---STAIEELPSSIEHLTGLVLLDLKSCSKLENFPEMMKEMENLKELFLDGTS 319

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           I  +P S+ +L  L  L L+ C +  SLP  +    SL +L +  C      P  +G+L+
Sbjct: 320 IEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNFPKNLGSLQ 379

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLE 530
           +L      GTAI + P+S+  L +L+
Sbjct: 380 HLAQPHANGTAITQPPDSIVLLRNLK 405



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 27/220 (12%)

Query: 370 FP--EIPFCNIDGSGIERIPSS-----VLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCK 421
           FP  E+ +    G  +E +PSS     +++L+ C S L+ L  S  + + L ++ +  C+
Sbjct: 137 FPSYELRYLYWQGYPLESLPSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQ 196

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
           +L  +PD                 +      L++L L  L LK C    S PS + + ++
Sbjct: 197 RLIEIPD---------------ISVHPSIGKLSKLIL--LNLKNCKKLSSFPSIIDM-EA 238

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL-SDNNLQ 540
           L  L +  C    + PD  GN+E+L  L +  TAI E+P S+  L+ L  L L S + L+
Sbjct: 239 LEILNLSGCSELKKFPDIQGNMEHLLELYLASTAIEELPSSIEHLTGLVLLDLKSCSKLE 298

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
             PE + ++ +L  L L   ++E +P  +D L  L  L+L
Sbjct: 299 NFPEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLVLLNL 338


>gi|15238668|ref|NP_197290.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005098|gb|AED92481.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1197

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 156/319 (48%), Gaps = 24/319 (7%)

Query: 13  YTFSKMTELRLLKFCGS------KNKCMVHSLEGV--PFTELRYFEWHQFPLKTL-NILH 63
           + F+ M +LR LK   +      ++   ++  EG+  P  E+RY  W +FPLK +    +
Sbjct: 576 HAFAMMRDLRYLKIYSTHCPQECESDIKLNFPEGLLLPLNEVRYLHWLKFPLKEVPQDFN 635

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             NLV LK+P S++ ++W+D ++   LK ++L +SK L  L  L  AQNL+ L+L  C++
Sbjct: 636 PGNLVDLKLPYSEIERVWEDNKDAPKLKWVNLNHSKKLNTLAGLGKAQNLQELNLEGCTA 695

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E H  ++ +  L  L+L  C SL SLP  I    LK L+L GCS  K   ++ S  L 
Sbjct: 696 LKEMHVDMENMKFLVFLNLRGCTSLKSLP-EIQLISLKTLILSGCSKFKTF-QVISDKLE 753

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           + L L G  I+ELP  I  L  +  L +  CK+L+ +  S+ +L+ LE + +  C  L  
Sbjct: 754 A-LYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNE 812

Query: 244 LEMPSCN--------IDGTRSKEQPS----SELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                 N        +D T  K+ P       L L K  +   LP     F  L  L + 
Sbjct: 813 FPETWGNMSRLEILLLDETAIKDMPKILSVRRLCLNKNEKISRLPDLLNKFSQLQWLHLK 872

Query: 292 DCPNFERLPDELGNLQALN 310
            C N   +P    NLQ LN
Sbjct: 873 YCKNLTHVPQLPPNLQYLN 891



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 197/440 (44%), Gaps = 78/440 (17%)

Query: 325  GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
            GLG+   L +L L+ C+ L+ +   +  +K +  + +  C++LK  PEI   ++      
Sbjct: 678  GLGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISL------ 731

Query: 385  RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
                  L L+ CSK ++              ++I  K              LE L ++GT
Sbjct: 732  ----KTLILSGCSKFKTF-------------QVISDK--------------LEALYLDGT 760

Query: 445  GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I+E+P  + +L  L  L +K C   + LP  L   K+L  L +  C      P+  GN+
Sbjct: 761  AIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETWGNM 820

Query: 504  EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NN 561
              L++L +  TAI+++P+ L    S+  L L+ N  +  +P+ LN+ S L  L L    N
Sbjct: 821  SRLEILLLDETAIKDMPKIL----SVRRLCLNKNEKISRLPDLLNKFSQLQWLHLKYCKN 876

Query: 562  LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPN 621
            L  +P+ L P  +L+YL++  +    +    +    SIP     +  S    NC +L+  
Sbjct: 877  LTHVPQ-LPP--NLQYLNV--HGCSSLKTVAKPLVCSIP--MKHVNSSFIFTNCNELEQA 929

Query: 622  ELSEIIKDGWMKQSVNG-------ETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTP 671
               EI+     K  +         E+ + + ++   FPG E+P WF H + GS +  + P
Sbjct: 930  AKEEIVVYAERKCHLLASALKRCDESCVPEILFCTSFPGCEMPSWFSHDAIGSMVEFELP 989

Query: 672  QPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRS-EGYDSYTSSYLG 730
                +N+L G A CVVV  S   C  H ++       +    C++ + EG  S  +  +G
Sbjct: 990  PHWNHNRLSGIALCVVV--SFKNCKSHANL-------IVKFSCEQNNGEGSSSSITWKVG 1040

Query: 731  KI-------SHVESDHVFLG 743
             +         VESDHVF+G
Sbjct: 1041 SLIEQDNQEETVESDHVFIG 1060



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 18/219 (8%)

Query: 303 LGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           LG  Q L  L ++G TA++E+   +  +  L  L L+ C+ L+ +     +L S++++ +
Sbjct: 679 LGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPE--IQLISLKTLIL 736

Query: 362 SNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMF 409
           S CS  K F     ++    +DG+ I+ +P  + +L +        C KL+ LP SL   
Sbjct: 737 SGCSKFKTFQVISDKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQL 796

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
           K+L  L +  C KL   P+  GN+  LE L ++ T I+++PK    L++ +L L K    
Sbjct: 797 KALEELILSGCSKLNEFPETWGNMSRLEILLLDETAIKDMPKI---LSVRRLCLNKNEKI 853

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
             LP  L     L  L +  CKN   +P    NL+YL V
Sbjct: 854 SRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNV 892



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 16/184 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   +SLP  Q +  SL +L +  C  F+        L+AL    +DGTAI+ELP
Sbjct: 712 LNLRGCTSLKSLPEIQLI--SLKTLILSGCSKFKTFQVISDKLEAL---YLDGTAIKELP 766

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFC 376
             +G+L  L  L +K C +L+ +  S+ +LK++E + +S CS L  FPE       +   
Sbjct: 767 CDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETWGNMSRLEIL 826

Query: 377 NIDGSGIERIPSSV----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            +D + I+ +P  +    L LNK  K+  LP  L  F  L  L +  CK L  +P    N
Sbjct: 827 LLDETAIKDMPKILSVRRLCLNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPN 886

Query: 433 LEAL 436
           L+ L
Sbjct: 887 LQYL 890


>gi|399920222|gb|AFP55569.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1134

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 181/379 (47%), Gaps = 51/379 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N   FSKM +L+LL          +H+L+   G  F    LR+  W  +P K+L  
Sbjct: 552 EADWNLEAFSKMCKLKLL---------YLHNLKLSVGPKFLPNALRFLNWSWYPSKSLPP 602

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+ ++   +LK IDL YS  LT+ PD +   NLE L L  
Sbjct: 603 CFQPDELTELSLVHSNIDHLWNGIKCSRNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEG 662

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS- 179
           C++L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 663 CTNLVKIHPSITLLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQ 722

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
               S L + G  +E LPSS                  E +S S+ +L  L  I I   P
Sbjct: 723 TKTLSKLCIGGSAVENLPSS-----------------FERLSKSLVELD-LNGIVIREQP 764

Query: 240 NLQFLEMP-SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+     +  G   ++ P        CP    L S +  F SLT L++ DC   E 
Sbjct: 765 YSLFLKQNLRVSFFGLFPRKSP--------CPLTPLLASLK-HFSSLTQLKLNDCNLCEG 815

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G L +L  L + G     LP  +  L+ L ++ ++NC  L+ +     +L + +
Sbjct: 816 EIPNDIGYLSSLELLQLRGNNFVNLPASIHLLSKLKRINVENCKRLQQLP----ELPATD 871

Query: 358 SIEI--SNCSNLKGFPEIP 374
            + +   NC++L+ FP+ P
Sbjct: 872 ELRVVTDNCTSLQVFPDPP 890



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 232/514 (45%), Gaps = 99/514 (19%)

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            P+ L +L+L+        S ++++ + I   ++++SI++S   NL   P       D +G
Sbjct: 606  PDELTELSLVH-------SNIDHLWNGIKCSRNLKSIDLSYSINLTRTP-------DFTG 651

Query: 383  IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            I  +   VL+   C+ L  +  S+ + K L      +CK ++ LP E+ N+E LE   V 
Sbjct: 652  IPNLEKLVLE--GCTNLVKIHPSITLLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVS 708

Query: 443  G-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL-YVSKSLTSLEIIDCKNFMRLPDE 499
            G + ++ +P+ + Q   LSKL +   S+ E+LPS    +SKSL  L++    N + + ++
Sbjct: 709  GCSKLKMIPEFVGQTKTLSKLCIGG-SAVENLPSSFERLSKSLVELDL----NGIVIREQ 763

Query: 500  IGNLEYLKV---LTIKGTAIREVP-------ESLGQLSSLEWLVLSDNNL--QIIPESLN 547
              +L +LK    ++  G   R+ P        SL   SSL  L L+D NL    IP  + 
Sbjct: 764  PYSL-FLKQNLRVSFFGLFPRKSPCPLTPLLASLKHFSSLTQLKLNDCNLCEGEIPNDIG 822

Query: 548  QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTS 605
             LSSL  L+L  NN   +P  +  LS LK +++ EN   L ++PE        +P+    
Sbjct: 823  YLSSLELLQLRGNNFVNLPASIHLLSKLKRINV-ENCKRLQQLPE--------LPAT-DE 872

Query: 606  LRLSVDLRNCLKL----DPNELSEIIKDGWMK-----QSVNGETY--------------I 642
            LR+  D  NC  L    DP  LS    + W+       +V  + +               
Sbjct: 873  LRVVTD--NCTSLQVFPDPPNLSRC-PEFWLSGINCFSAVGNQGFRYFLYSRLKQLLEET 929

Query: 643  TKSMYF-----PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCR 697
              S+Y+     PG+EIP+WF +QS G ++  K P     +K +G A C ++    +    
Sbjct: 930  PWSLYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACNSKWIGVALCFLIVPQDNPSAV 989

Query: 698  HESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV-------FLGSSIFAGE 750
             E    D    +F    ++   G+    ++    +  + SDH+       F+       E
Sbjct: 990  PEVRHLDPFTRVF-CCWNKNCSGHGRLVTT----VKQIVSDHLLFAVLPKFIWKPQNCLE 1044

Query: 751  NSCKRSDEFFFHIDRSC-----CEVKKCGIHFVH 779
            ++C    +F F +D++       +VKKCG   ++
Sbjct: 1045 DTCTEI-KFVFVVDQTVGNSRGLQVKKCGARILY 1077


>gi|22531229|gb|AAM97118.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 586

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 139/267 (52%), Gaps = 29/267 (10%)

Query: 7   EIQINPYTFSKMTELRLLK-----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           E+ +    F  M  L+ L+     F       +   +E +P   +R   W  +P K+L  
Sbjct: 59  EVSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPEDMEYIP--PVRLLHWQNYPRKSLPQ 116

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             + E+LV ++MP SK+ +LW  +Q L +LK ID+ +S  L ++P+LS A NLEIL L +
Sbjct: 117 RFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEF 176

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E   SI  L+KLE+L+++ C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 177 CKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDISSN 236

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRL----------------ENISS 222
             +  L L    IE++P S+ C S +  L I   S KRL                E+I  
Sbjct: 237 IKK--LNLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPE 294

Query: 223 SIFKLQFLESIRIHRCPNLQ-FLEMPS 248
           SI  L  L+ + ++ C  L+  L +PS
Sbjct: 295 SIIGLTRLDWLNVNSCRKLKSILGLPS 321



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 61/273 (22%)

Query: 413 TSLEIID---CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
           T+LEI+    CK L  LP  + NL  LE L VE                       CS  
Sbjct: 167 TNLEILSLEFCKSLVELPFSILNLHKLEILNVE----------------------NCSML 204

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           + +P+ + ++ SL  L++  C      PD   N   +K L +  T I +VP S+G  S L
Sbjct: 205 KVIPTNINLA-SLERLDMTGCSELRTFPDISSN---IKKLNLGDTMIEDVPPSVGCWSRL 260

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L +   +L+     L+    + SL L  +N+E IPE +  L+ L +L++   N  R  
Sbjct: 261 DHLYIGSRSLK----RLHVPPCITSLVLWKSNIESIPESIIGLTRLDWLNV---NSCRKL 313

Query: 590 EYLRSFPTSIPS--------------EFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQS 635
           + +   P+S+                 F +   ++   NCL LD     E  + G ++QS
Sbjct: 314 KSILGLPSSLQDLDANDCVSLKRVCFSFHNPIRALSFNNCLNLD-----EEARKGIIQQS 368

Query: 636 VNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           V       + +  PG +IP+ F H++TG +I++
Sbjct: 369 V------YRYICLPGKKIPEEFTHKATGRSITI 395



 Score = 45.8 bits (107), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 34/151 (22%)

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-- 375
           ++ ELP  +  L  L  L ++NCS L+ I ++I  L S+E ++++ CS L+ FP+I    
Sbjct: 179 SLVELPFSILNLHKLEILNVENCSMLKVIPTNI-NLASLERLDMTGCSELRTFPDISSNI 237

Query: 376 --CNIDGSGIERIPSSV------------------LKLNKC--------SKLESLPSSLC 407
              N+  + IE +P SV                  L +  C        S +ES+P S+ 
Sbjct: 238 KKLNLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPESII 297

Query: 408 MFKSLTSLEIIDCKKLER---LPDELGNLEA 435
               L  L +  C+KL+    LP  L +L+A
Sbjct: 298 GLTRLDWLNVNSCRKLKSILGLPSSLQDLDA 328


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 250/583 (42%), Gaps = 101/583 (17%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILH 63
            ++ + ++P  F KM  LRLL     +N      +E +P   L++ +WH F   T  +   
Sbjct: 528  STRLDVDPQAFRKMKNLRLLIV---QNARFSTKIEYLP-DSLKWIKWHGFRQPTFPSFFT 583

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
             +NLV L +  S +      +++   LK +DL YS  L K+P+ S A NLE L L  C++
Sbjct: 584  MKNLVGLDLQHSFIKTFGKRLEDCERLKYVDLSYSTFLEKIPNFSAASNLEELYLTNCTN 643

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHL 182
            L     S+  L+KL VL+LD C +L  LP        LK+L L  C  L+ +P ++S   
Sbjct: 644  LGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKLEKIPDLSSA-- 701

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
                                 SN+  L IY C  L  I  S+  L  LE + + +C NL 
Sbjct: 702  ---------------------SNLTSLHIYECTNLRVIHESVGSLDKLEGLYLKQCTNL- 739

Query: 243  FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
                                                    KSL  L +  C   E  P  
Sbjct: 740  -------------------------------VKLPSYLSLKSLLCLSLSGCCKLESFPTI 768

Query: 303  LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
              N+++L  L +D TAI+ELP  +  L  L  L+L  C+ L  + ++I+ L+S+E++ +S
Sbjct: 769  AKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIYLLRSLENLLLS 828

Query: 363  NCSNLKGFPE------IPFCNIDGSGIERIPSSVLKLNKCSKLESL--PSSLCMFKSLTS 414
             CS    FP+       P C+         PS +++    + L SL  P  L   +S + 
Sbjct: 829  GCSIFGMFPDKWNPTIQPVCS---------PSKMME----TALWSLKVPHFLVPNESFSH 875

Query: 415  LEIIDCKKLE----RLPDELGNLEA-LEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSS 468
              ++D +          D L ++   L +LR+       +P  L + ++L  L+L+ C  
Sbjct: 876  FTLLDLQSCNISNANFLDILCDVAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELRNCKF 935

Query: 469  FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-------EVPE 521
             + +PS   + +S+  ++   C++  R+PD I ++   K     G   R       E+PE
Sbjct: 936  LQEIPS---LPESIQKMDACGCESLSRIPDNIVDIISKKQDLTMGEISREFLLTGIEIPE 992

Query: 522  SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
                 ++     L   + +  P+    L++ VS K++ N+ ER
Sbjct: 993  WFSYKTTSN---LVSASFRHYPDMERTLAACVSFKVNGNSSER 1032



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 200/448 (44%), Gaps = 49/448 (10%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L + +C N   +   + +L  L  L +DG + +++LP G   L+ L KL L  C +
Sbjct: 632  NLEELYLTNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKK 691

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            LE I   +    ++ S+ I  C+NL+   E          ++++    L L +C+ L  L
Sbjct: 692  LEKIPD-LSSASNLTSLHIYECTNLRVIHE------SVGSLDKLEG--LYLKQCTNLVKL 742

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
            PS L + KSL  L +  C KLE  P    N+++L  L ++ T I+E+P S+  L  L  L
Sbjct: 743  PSYLSL-KSLLCLSLSGCCKLESFPTIAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTL 801

Query: 462  KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG----------NLEYLKVLTI 511
            KL  C++  SLP+ +Y+ +SL +L +  C  F   PD+             +    + ++
Sbjct: 802  KLNGCTNLISLPNTIYLLRSLENLLLSGCSIFGMFPDKWNPTIQPVCSPSKMMETALWSL 861

Query: 512  KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            K        ES    + L+    + +N   +    +    L  L+LS N    +P  L  
Sbjct: 862  KVPHFLVPNESFSHFTLLDLQSCNISNANFLDILCDVAPFLSDLRLSENKFSSLPSCLHK 921

Query: 572  LSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNELSEIIKD 629
              SL  L+L      R  ++L+  P S+P     +    D   C  L   P+ + +II  
Sbjct: 922  FMSLWNLEL------RNCKFLQEIP-SLPESIQKM----DACGCESLSRIPDNIVDIISK 970

Query: 630  GWMKQSVN-GETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
               KQ +  GE  I++     G EIP+WF +++T + +S          + +  A CV  
Sbjct: 971  ---KQDLTMGE--ISREFLLTGIEIPEWFSYKTTSNLVSASFRHYPDMERTL--AACVSF 1023

Query: 689  ACSVSECCRHESVEDDRKCNLFDVVCDR 716
              + +   R   +     CN+F  VC+R
Sbjct: 1024 KVNGNSSERGARIS----CNIF--VCNR 1045


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 171/372 (45%), Gaps = 45/372 (12%)

Query: 11  NPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLVS 69
           NP  FSKM  L+LL     +      SL       LR  +W  +PLK+L      + L  
Sbjct: 554 NPEAFSKMCNLKLLYIHNLRLSLGPKSLPDA----LRILKWSWYPLKSLPPGFQPDELTE 609

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L    S +  LW+ ++ L +LK I L YS  L + PD +   NLE L L  C++L + H 
Sbjct: 610 LSFVHSNIDHLWNGIKYLGNLKSIVLSYSINLIRTPDFTGIPNLEKLVLEGCTNLVKIHP 669

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPL 188
           SI  L +L++ +   CKS+ +LP+ ++ ++L+   + GCS LK +P+      R S L L
Sbjct: 670 SIALLKRLKIWNFRNCKSIKTLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCL 729

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
            G  +E+LPSSI                 E++S S+  L  L  I I   P   FL+   
Sbjct: 730 GGTAVEKLPSSI-----------------EHLSESLVGLD-LSGIVIREQPYSLFLK--- 768

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLP-----SGQCMFKSLTSLEIIDCPNFE-RLPDE 302
                   +   +S L L   PR    P     +    F SL  L + DC   E  +P++
Sbjct: 769 --------QNVIASSLGL--FPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPND 818

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G+L +L  L + G     LP  +  L  L  + ++NC  L+ +      +     +   
Sbjct: 819 IGSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPE--LPVSGSLRVTTV 876

Query: 363 NCSNLKGFPEIP 374
           NC++L+ FPE+P
Sbjct: 877 NCTSLQVFPELP 888



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 139/564 (24%), Positives = 244/564 (43%), Gaps = 88/564 (15%)

Query: 272  PESLPSGQCMFK-SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            P+SLP    + K S   L+ +  P F+  PDEL  L  ++      + I  L  G+  L 
Sbjct: 578  PKSLPDALRILKWSWYPLKSLP-PGFQ--PDELTELSFVH------SNIDHLWNGIKYLG 628

Query: 331  LLSKLELKNCSELEYISSSIFK-LKSVESIEISNCSNL-KGFPEIPFCNIDGSGIERIPS 388
             L  + L     L  I +  F  + ++E + +  C+NL K  P I         ++R+  
Sbjct: 629  NLKSIVLSYSINL--IRTPDFTGIPNLEKLVLEGCTNLVKIHPSIAL-------LKRL-- 677

Query: 389  SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
             +     C  +++LPS + M + L + ++  C KL+ +P+ +G  + L +L + GT + +
Sbjct: 678  KIWNFRNCKSIKTLPSEVNM-EFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLGGTAVEK 736

Query: 449  VPKSLAQLALSKLKLKKCS-SFESLPSRLYVSKSL--TSLEIIDCKNFMRLPDEIGNLEY 505
            +P S+  L+ S + L          P  L++ +++  +SL +   K+   L   + +L++
Sbjct: 737  LPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKH 796

Query: 506  ---LKVLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN- 559
               LK L +    +   E+P  +G LSSLE L L  NN   +P S++ L  L S+ + N 
Sbjct: 797  FSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENC 856

Query: 560  NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLRNCLKL 618
              L+++PE L    SL+   +   +L   PE        +P +   L   S++  NCL  
Sbjct: 857  KRLQQLPE-LPVSGSLRVTTVNCTSLQVFPE--------LPPDLCRLSAFSLNSVNCLST 907

Query: 619  DPNELSEIIKDGWMKQ--SVNGETYITK-------------------------------- 644
              N+ +       + +   V   TY+                                  
Sbjct: 908  IGNQDASFFLYSVINRLLEVTYVTYVRSLSLSLSLSLSLSLSLSLSLSRSLETHLSFEFL 967

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
            +   PG+EIP+WF +QS G +++ K P     +K +GFA C ++    +     E  + D
Sbjct: 968  NFLIPGSEIPEWFNNQSAGDSVTEKLPWDACNSKWIGFAVCALIVPQDNPSAVPEDPDLD 1027

Query: 705  RKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFL--GSSIFAGENSCKRSDEFFFH 762
                L  + C+  + G +      L  +   +SDH++L    S F    +C R   F F 
Sbjct: 1028 PDTCL--ISCNWSNYGINGVVGRGLC-VRQFDSDHLWLLVLPSPFRKPKNC-REVNFVFQ 1083

Query: 763  IDRS-----CCEVKKCGIHFVHAQ 781
              R+     C +VKKCG+  ++ Q
Sbjct: 1084 TARAVGNNRCMKVKKCGVRALYEQ 1107


>gi|356532658|ref|XP_003534888.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1072

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 141/267 (52%), Gaps = 45/267 (16%)

Query: 15  FSKMTELRLLKFCGSKNKCMVHSL-EGVPF--TELRYFEWHQFPLKTL--NILHWENLVS 69
           F+ M++L+ LK  G  N  +++ L EG+ F  TELR+  W  +PLK+L  N +    LV 
Sbjct: 551 FTNMSKLQFLKISGKYNDDLLNILAEGLQFLETELRFLYWDYYPLKSLPENFIA-RRLVI 609

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L+ P  ++ +LWD VQNLV+LK++DL  S  L +LPDLS A NLE L LG CS LT  H 
Sbjct: 610 LEFPFGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSGATNLEELKLGGCSMLTSVHP 669

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPT---------------------SIHSKYLKRLVLRGC 168
           SI  L KLE L L  CKSLT + +                     S+ S  +K L L G 
Sbjct: 670 SIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCENLREFSLISDNMKELRL-GW 728

Query: 169 SNLKNLP-------KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
           +N++ LP       K+ S  LR +       IE+LPSSI  L+ +  L I  C+ L+ I 
Sbjct: 729 TNVRALPSSFGYQSKLKSLDLRRS------KIEKLPSSINNLTQLLHLDIRYCRELQTIP 782

Query: 222 SSIFKLQFLESIRIHRCPNLQFL-EMP 247
                  FLE +    C +LQ L E+P
Sbjct: 783 ELPM---FLEILDAECCTSLQTLPELP 806



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%)

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSS 468
           +L  +++    KLE LPD L     LEEL++ G + +  V  S+  L  L KL L  C S
Sbjct: 629 NLKKVDLTSSNKLEELPD-LSGATNLEELKLGGCSMLTSVHPSIFSLPKLEKLFLINCKS 687

Query: 469 FESLPSRLYVSK--SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
              + S    SK  SL+ L ++ C+N         N+   K L +  T +R +P S G  
Sbjct: 688 LTIVTSD---SKLCSLSHLYLLFCENLREFSLISDNM---KELRLGWTNVRALPSSFGYQ 741

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           S L+ L L  + ++ +P S+N L+ L+ L +     L+ IPE
Sbjct: 742 SKLKSLDLRRSKIEKLPSSINNLTQLLHLDIRYCRELQTIPE 783



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 30/229 (13%)

Query: 288 LEIIDCP--NFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L I++ P    ++L D + NL  L ++ +     + ELP+ L     L +L+L  CS L 
Sbjct: 607 LVILEFPFGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPD-LSGATNLEELKLGGCSMLT 665

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPE-----------IPFC-NIDGSGIERIPSSVLK 392
            +  SIF L  +E + + NC +L                + FC N+    +       L+
Sbjct: 666 SVHPSIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCENLREFSLISDNMKELR 725

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV----EGTGIRE 448
           L   + + +LPSS      L SL+ +   K+E+LP  + NL  L  L +    E   I E
Sbjct: 726 LG-WTNVRALPSSFGYQSKLKSLD-LRRSKIEKLPSSINNLTQLLHLDIRYCRELQTIPE 783

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +P     + L  L  + C+S ++LP    + + L +L I +CK+ + LP
Sbjct: 784 LP-----MFLEILDAECCTSLQTLPE---LPRFLKTLNIRECKSLLTLP 824



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 17/199 (8%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLA 457
           L+SLP +  + + L  LE     ++++L D + NL  L+++ +  +  + E+P       
Sbjct: 595 LKSLPENF-IARRLVILEF-PFGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSGATN 652

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE--IGNLEYLKVLTIKGTA 515
           L +LKL  CS   S+   ++    L  L +I+CK+   +  +  + +L +L +L  +   
Sbjct: 653 LEELKLGGCSMLTSVHPSIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCEN-- 710

Query: 516 IRE---VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
           +RE   + +++ +L  L W      N++ +P S    S L SL L  + +E++P  ++ L
Sbjct: 711 LREFSLISDNMKELR-LGW-----TNVRALPSSFGYQSKLKSLDLRRSKIEKLPSSINNL 764

Query: 573 SSLKYLDL-FENNLDRIPE 590
           + L +LD+ +   L  IPE
Sbjct: 765 TQLLHLDIRYCRELQTIPE 783


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 272/566 (48%), Gaps = 88/566 (15%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYS---KLLTKLPDLSLAQNLEILDLGYCSS 123
           L  L +  +K+ +L + + NL +LK +DL ++    L T + DLS   NL  L+L + + 
Sbjct: 64  LTRLYVRNTKIARLPESIGNLSNLKELDLTWNLIEILPTSIGDLS---NLTHLNLSHATK 120

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCH 181
           L E   SI  L+KL  L+L     +T+LP SI +   LK L L  CS L+ +P  + S  
Sbjct: 121 LAELPDSIGNLSKLTYLNLS-AGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLK 179

Query: 182 LRSTLPLLGVG-------IEEL-------------------PSSIKCLSNIGELLIYSCK 215
             + + L G G       IE+L                   P SI  LS +  L + S  
Sbjct: 180 NLTHIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDL-SHN 238

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
           RL ++  SI  L+ L  + + +C N+  L +   ++         S++L L+   R ES+
Sbjct: 239 RLNSLPESIGLLKNLVWLNL-KCNNIAILPISIEHLVNLTYLNLYSNKL-LRN--RSESI 294

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                +     S   +D      L D +GNL+ LN L +    +  LPE +G+L  LS L
Sbjct: 295 GKLINLNYLNLSNNKVDI-----LFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCL 349

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           +L        I++ I  L         N  NL+        N++G+ I R+P  +  L K
Sbjct: 350 QL--------INNKIVDLTK----NFGNLVNLRKL------NLNGNNINRLPDDIGNLKK 391

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
             +L        ++K+           LE+LPD +GNL +L  L +    I E+P ++  
Sbjct: 392 LKEL-------YLWKN----------NLEKLPDSIGNLTSLSILDLGRNQISELPDTIGN 434

Query: 456 LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL-PDEIGNLEYLKVLTIKG 513
           L  + KL L K +    LP  +   +S++ L +   +N+++L P+ +GNL  LK L I  
Sbjct: 435 LHNIEKLDLYK-NRLTCLPETISNLQSISHLYL--QRNYIKLLPEGMGNLTNLKKLKIWN 491

Query: 514 TAIREVPESLGQLSS-LEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
             +R +PES+G L++ L+ L + +N L+ +PES+  L +L SL  +NN L  IP+ +  +
Sbjct: 492 NRLRCLPESIGNLAANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNI 551

Query: 573 SSLKYLDLFENNLDRIPE--YLRSFP 596
           ++LK L+L +N L  + +   L++ P
Sbjct: 552 TNLKTLNLTKNPLTDLTDLSVLQTIP 577



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 172/416 (41%), Gaps = 90/416 (21%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           E LP+      +LT L +        LPD +GNL  L  L +    I  LPE +G L  L
Sbjct: 98  EILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRL 157

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI---------PFCNIDGSGI 383
             L L  CS+L+ I ++I  LK++  I++        F  I             I+ S I
Sbjct: 158 KHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSI 217

Query: 384 ERIPSSVLKLNKCS-------KLESLPSSLCMFKSLTSLEIIDCKKLERLP--------- 427
             IP S+  L+K +       +L SLP S+ + K+L  L  + C  +  LP         
Sbjct: 218 VTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLN-LKCNNIAILPISIEHLVNL 276

Query: 428 --------------------------------------DELGNLEALEELRVEGTGIREV 449
                                                 D +GNL+ L EL +    +  +
Sbjct: 277 TYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSL 336

Query: 450 PKSLAQLA------------------------LSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           P+++ +L                         L KL L   ++   LP  +   K L  L
Sbjct: 337 PENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNG-NNINRLPDDIGNLKKLKEL 395

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
            +    N  +LPD IGNL  L +L +    I E+P+++G L ++E L L  N L  +PE+
Sbjct: 396 YLWK-NNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPET 454

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPS 601
           ++ L S+  L L  N ++ +PE +  L++LK L ++ N L  +PE + +   ++ S
Sbjct: 455 ISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQS 510



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 37/292 (12%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LPD +G+L  L  L I   ++  LPE +G L+ L++L ++N        + I +L     
Sbjct: 31  LPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRN--------TKIARLPE--- 79

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
             I N SNLK   E+                       + +E LP+S+    +LT L + 
Sbjct: 80  -SIGNLSNLK---ELDLT-------------------WNLIEILPTSIGDLSNLTHLNLS 116

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY 477
              KL  LPD +GNL  L  L +    I  +P+S+  L  L  L L  CS  + +P+ + 
Sbjct: 117 HATKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIG 176

Query: 478 VSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
             K+LT +++      +  +  +++G    L  L I  ++I  +PES+G LS L  L LS
Sbjct: 177 SLKNLTHIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLS 236

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
            N L  +PES+  L +LV L L  NN+  +P  ++ L +L YL+L+ N L R
Sbjct: 237 HNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLR 288



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 26/180 (14%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
           +   +L  LPD +G+L  L EL +    +  +P+S+    LSKL            +RLY
Sbjct: 23  LGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGN--LSKL------------TRLY 68

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD- 536
           V  +             RLP+ IGNL  LK L +    I  +P S+G LS+L  L LS  
Sbjct: 69  VRNT----------KIARLPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHA 118

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSF 595
             L  +P+S+  LS L  L LS   +  +PE +  L  LK+L+L + + L +IP  + S 
Sbjct: 119 TKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSL 178



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 8/117 (6%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LPD IG+L  L  L I   ++  +PES+G LS L  L + +  +  +PES+  LS+L  L
Sbjct: 31  LPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPESIGNLSNLKEL 90

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP--SEFTSLRLSV 610
            L+ N +E +P  +  LS+L +L+L           L   P SI   S+ T L LS 
Sbjct: 91  DLTWNLIEILPTSIGDLSNLTHLNLSH------ATKLAELPDSIGNLSKLTYLNLSA 141



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 9/108 (8%)

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           E   +L +    +  +P+++G L+ L  L ++  +L  +PES+  LS L  L + N  + 
Sbjct: 16  ERWSILRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIA 75

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP--SEFTSLRLS 609
           R+PE +  LS+LK LDL  N        +   PTSI   S  T L LS
Sbjct: 76  RLPESIGNLSNLKELDLTWN-------LIEILPTSIGDLSNLTHLNLS 116


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 210/461 (45%), Gaps = 112/461 (24%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--------GSGI 383
            L ++ L  C+ L  +  SI  LK +  + +  CS L+ FPE+   N++        G+ I
Sbjct: 650  LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 709

Query: 384  ERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
              +PSS+        L L  C KL SLP S+C   SL +L +  C KL++LPD+LG L+ 
Sbjct: 710  RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 769

Query: 436  LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS-KSLTSLEIIDCKNF 493
            L EL V+GTGI+EVP S+  L  L +L L  C  +ES    L  S  S  +LE       
Sbjct: 770  LVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGSWPTLEP------ 823

Query: 494  MRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSS 551
            +RLP  +  L  LK+L +    + E  +P  L  LSSLE L LS N+   IP +L+ LS 
Sbjct: 824  LRLP-RLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSR 882

Query: 552  LVSLKLSN-NNLERIPERLDPLSSLKYLD------------------------------- 579
            L  L L    +L+ +PE     SS++YL+                               
Sbjct: 883  LHVLMLPYCKSLQSLPELP---SSIRYLNAEACTSLETFSCSPSACTSKRYGGLRLEFSN 939

Query: 580  ---LFENNLDRIP----------EYLRSFPTSI-----------------PSEFTSLR-- 607
               L EN   R+           + L   P+SI                 PS  TS R  
Sbjct: 940  CFRLMENEHSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYG 999

Query: 608  -LSVDLRNCLKLDPNELSEIIKD------------GWMKQSVNGETYITKSMY---FPGN 651
             L ++  NC +L  NE ++ +K              +++  + G      ++Y    PG+
Sbjct: 1000 GLRLEFSNCFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNLYDAIVPGS 1059

Query: 652  EIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACS 691
             IP+WF  QSTGS+++++ P P  YN KLMG A C V+  +
Sbjct: 1060 RIPEWFVDQSTGSSVTVELP-PHWYNTKLMGMAVCAVIGAT 1099



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 212/500 (42%), Gaps = 93/500 (18%)

Query: 11  NPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVS 69
           +PY  SK+   R  KF               P   LR   WH +PLK+L +I H + LV 
Sbjct: 562 SPYNDSKLHLSRDFKF---------------PSNNLRSLHWHGYPLKSLPSIFHPKKLVE 606

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L M  S + QLW+  +    LK I L +S+ LTK PD S A  L  + L  C+SL + H 
Sbjct: 607 LNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHP 666

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
           SI  L +L  L+L+ C  L   P           V++G  NL++L         S + L 
Sbjct: 667 SIGALKELIFLNLEGCSKLEKFPE----------VVQG--NLEDL---------SGISLE 705

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE---- 245
           G  I ELPSSI  L+ +  L + +CK+L ++  SI +L  L+++ +  C  L+ L     
Sbjct: 706 GTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLG 765

Query: 246 ----MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
               +   ++DGT  KE PSS                  +  +L  L +  C  +E    
Sbjct: 766 RLQCLVELHVDGTGIKEVPSS----------------INLLTNLQELSLAGCKGWES--- 806

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
                ++ N     G+     P  L +L+ L  L++ N S+   +  ++    S  S   
Sbjct: 807 -----KSWNLAFSFGSWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLE 861

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL-----TSLE 416
               +   F  IP  N+  SG+ R+   VL L  C  L+SLP      + L     TSLE
Sbjct: 862 MLDLSRNSFITIP-ANL--SGLSRL--HVLMLPYCKSLQSLPELPSSIRYLNAEACTSLE 916

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPS- 474
              C          G       LR+E +   R +    ++L +  L L  C S +SLP  
Sbjct: 917 TFSCSPSACTSKRYGG------LRLEFSNCFRLMENEHSRLHV--LMLPYCKSLQSLPEL 968

Query: 475 ----RLYVSKSLTSLEIIDC 490
               R   +++ TSLE   C
Sbjct: 969 PSSIRYLNAEACTSLETFSC 988


>gi|356558197|ref|XP_003547394.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1122

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 137/271 (50%), Gaps = 34/271 (12%)

Query: 9   QINPYTFSKMTELRLLKFCGSKNKCMVHSLE-------GVPFT--ELRYFEWHQFPLKTL 59
           ++ P+ F KM  L+ L+  G   KC   S +        + F+  ELR+  W+ +PLK+L
Sbjct: 626 ELGPHIFGKMNRLQFLEISG---KCEEDSFDEQNILAKWLQFSANELRFLCWYHYPLKSL 682

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
                 E LV LK+P  ++  LW  V+NLV+LK + L  SK+L +LPDLS A NLE+L L
Sbjct: 683 PENFSAEKLVILKLPKGEIKYLWHGVKNLVNLKELHLTDSKMLEELPDLSNATNLEVLVL 742

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
             CS LT  H SI  L KLE L+L  C SLT+L ++ H   L  L L  C  L+ L  +T
Sbjct: 743 EGCSMLTTVHPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNLDKCEKLRKLSLIT 802

Query: 179 ----SCHLRST-----------------LPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
                  LR T                 L L G  I++LPSSIK L  +  L +  C +L
Sbjct: 803 ENIKELRLRWTKVKAFSFTFGDESKLQLLLLEGSVIKKLPSSIKDLMQLSHLNVSYCSKL 862

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           + I      L+ L++     C +L+ +  PS
Sbjct: 863 QEIPKLPPSLKILDARYSQDCTSLKTVVFPS 893



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 158/358 (44%), Gaps = 49/358 (13%)

Query: 411  SLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSS 468
            +L  L + D K LE LPD L N   LE L +EG + +  V  S+  L  L KL L+ C+S
Sbjct: 713  NLKELHLTDSKMLEELPD-LSNATNLEVLVLEGCSMLTTVHPSIFSLGKLEKLNLQDCTS 771

Query: 469  FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
              +L S  ++  SL+ L +  C+   +L     N+   K L ++ T ++    + G  S 
Sbjct: 772  LTTLASNSHLC-SLSYLNLDKCEKLRKLSLITENI---KELRLRWTKVKAFSFTFGDESK 827

Query: 529  LEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL-FENNLD 586
            L+ L+L  + ++ +P S+  L  L  L +S  + L+ IP +L P  SLK LD  +  +  
Sbjct: 828  LQLLLLEGSVIKKLPSSIKDLMQLSHLNVSYCSKLQEIP-KLPP--SLKILDARYSQDCT 884

Query: 587  RIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMK------------- 633
             +   +  FP++   +    R  V   NCLKL+   L  I  +  +              
Sbjct: 885  SLKTVV--FPSTATEQLKENRKEVLFWNCLKLNQQSLEAIALNAQINVIKFANRCLSAPN 942

Query: 634  -------QSVNGETYITKSMY-FPGNEIPKWFRHQSTGS--TISLKTPQPTGYNKLMGFA 683
                      + + +  + +Y +PG+ + +W  +++  +   I + +  P+     +GF 
Sbjct: 943  HDDVENYNDYDKKYHFYQVVYVYPGSSVLEWLEYKTRNNYIIIDMSSAPPS---LPVGFI 999

Query: 684  FCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLG-KISHVESDHV 740
            FC  +          E +E     N+   + DR  EG       Y+G +   +ESDH+
Sbjct: 1000 FCFALGMYGDTSL--ERIE----ANI--TISDREGEGKKDSVGMYIGLRNGTIESDHL 1049



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 24/231 (10%)

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           +KNL  +   HL  +  L     EELP  +   +N+  L++  C  L  +  SIF L  L
Sbjct: 708 VKNLVNLKELHLTDSKML-----EELPD-LSNATNLEVLVLEGCSMLTTVHPSIFSLGKL 761

Query: 231 ESIRIHRCPNLQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           E + +  C +L  L   S  C++          S L L KC +   L       K L   
Sbjct: 762 EKLNLQDCTSLTTLASNSHLCSL----------SYLNLDKCEKLRKLSLITENIKELR-- 809

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
             +     +      G+   L  L+++G+ I++LP  +  L  LS L +  CS+L+ I  
Sbjct: 810 --LRWTKVKAFSFTFGDESKLQLLLLEGSVIKKLPSSIKDLMQLSHLNVSYCSKLQEIPK 867

Query: 349 SIFKLKSVESIEISNCSNLKG--FPEIPFCNIDGSGIERIPSSVLKLNKCS 397
               LK +++    +C++LK   FP      +  +  E +  + LKLN+ S
Sbjct: 868 LPPSLKILDARYSQDCTSLKTVVFPSTATEQLKENRKEVLFWNCLKLNQQS 918


>gi|19699367|gb|AAL91293.1| AT5g41750/MUF8_3 [Arabidopsis thaliana]
 gi|24111427|gb|AAN46864.1| At5g41750/MUF8_3 [Arabidopsis thaliana]
          Length = 828

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 139/267 (52%), Gaps = 29/267 (10%)

Query: 7   EIQINPYTFSKMTELRLLK-----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           E+ +    F  M  L+ L+     F       +   +E +P   +R   W  +P K+L  
Sbjct: 301 EVSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPEDMEYIP--PVRLLHWQNYPRKSLPQ 358

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             + E+LV ++MP SK+ +LW  +Q L +LK ID+ +S  L ++P+LS A NLEIL L +
Sbjct: 359 RFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEF 418

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E   SI  L+KLE+L+++ C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 419 CKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDISSN 478

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRL----------------ENISS 222
             +  L L    IE++P S+ C S +  L I   S KRL                E+I  
Sbjct: 479 IKK--LNLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPE 536

Query: 223 SIFKLQFLESIRIHRCPNLQ-FLEMPS 248
           SI  L  L+ + ++ C  L+  L +PS
Sbjct: 537 SIIGLTRLDWLNVNSCRKLKSILGLPS 563



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 61/273 (22%)

Query: 413 TSLEIID---CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
           T+LEI+    CK L  LP  + NL  LE L VE                       CS  
Sbjct: 409 TNLEILSLEFCKSLVELPFSILNLHKLEILNVE----------------------NCSML 446

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           + +P+ + ++ SL  L++  C      PD   N   +K L +  T I +VP S+G  S L
Sbjct: 447 KVIPTNINLA-SLERLDMTGCSELRTFPDISSN---IKKLNLGDTMIEDVPPSVGCWSRL 502

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L +   +L+     L+    + SL L  +N+E IPE +  L+ L +L++   N  R  
Sbjct: 503 DHLYIGSRSLK----RLHVPPCITSLVLWKSNIESIPESIIGLTRLDWLNV---NSCRKL 555

Query: 590 EYLRSFPTSIPS--------------EFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQS 635
           + +   P+S+                 F +   ++   NCL LD     E  + G ++QS
Sbjct: 556 KSILGLPSSLQDLDANDCVSLKRVCFSFHNPIRALSFNNCLNLD-----EEARKGIIQQS 610

Query: 636 VNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           V       + +  PG +IP+ F H++TG +I++
Sbjct: 611 V------YRYICLPGKKIPEEFTHKATGRSITI 637



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 34/151 (22%)

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-- 375
           ++ ELP  +  L  L  L ++NCS L+ I ++I  L S+E ++++ CS L+ FP+I    
Sbjct: 421 SLVELPFSILNLHKLEILNVENCSMLKVIPTNI-NLASLERLDMTGCSELRTFPDISSNI 479

Query: 376 --CNIDGSGIERIPSSV------------------LKLNKC--------SKLESLPSSLC 407
              N+  + IE +P SV                  L +  C        S +ES+P S+ 
Sbjct: 480 KKLNLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPESII 539

Query: 408 MFKSLTSLEIIDCKKLER---LPDELGNLEA 435
               L  L +  C+KL+    LP  L +L+A
Sbjct: 540 GLTRLDWLNVNSCRKLKSILGLPSSLQDLDA 570


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
            thaliana]
          Length = 1162

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 190/429 (44%), Gaps = 73/429 (17%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT---------ELRYFEW 51
            + K   E+ I+     ++ + + +K     N    H  E V             +R  +W
Sbjct: 619  LYKNEEELNISEKALERIHDFQFVKI----NDVFTHQPERVQLALEDLIYQSPRIRSLKW 674

Query: 52   HQFPLKTL---NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
              FP + +   +  + E LV L M  S + +LW+  + L +LK +DL  S  L +LP+LS
Sbjct: 675  --FPYQNICLPSTFNPEFLVELDMSDSNLRKLWEGTKQLRNLKWMDLSDSSYLKELPNLS 732

Query: 109  LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
             A NLE L L  CSSL E  SSI+ L  L++LDL  C SL  LP+  ++  LK+L L  C
Sbjct: 733  TATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNTTKLKKLDLGKC 792

Query: 169  SNLKNLP-----------KMTSCHLRSTLPLLGVGIE-------------ELPSSIKCLS 204
            S+L  LP            + +C     LP +    +             ELP SI   +
Sbjct: 793  SSLVKLPPSINANNLQELSLRNCSRVVKLPAIENATKLRELKLRNCSSLIELPLSIGTAT 852

Query: 205  NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL 264
            N+ +L I  C  L  + SSI  +  LE   +  C +L  L     N+       Q  SEL
Sbjct: 853  NLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNL-------QKLSEL 905

Query: 265  KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
             + +C + E+LP+     KSL +L++ DC   +  P+   ++  L    + GTAI+E+P 
Sbjct: 906  LMSECSKLEALPTN-INLKSLYTLDLTDCTQLKSFPEISTHISELR---LKGTAIKEVPL 961

Query: 325  GLGQLALLSKLELKN--------------------CSELEYISSSIFKLKSVESIEISNC 364
             +   + L+  E+                        +++ +   + ++  +  + ++NC
Sbjct: 962  SITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMSRLRDLRLNNC 1021

Query: 365  SNLKGFPEI 373
            +NL   P++
Sbjct: 1022 NNLVSLPQL 1030



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 158/348 (45%), Gaps = 88/348 (25%)

Query: 302  ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            +L NL+ ++  + D + ++ELP  L     L +L+L+NCS L  + SSI KL S++ +++
Sbjct: 710  QLRNLKWMD--LSDSSYLKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDL 766

Query: 362  SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             +CS+L   P   F N   + +++     L L KCS L  LP S+    +L  L + +C 
Sbjct: 767  HSCSSLVELPS--FGNT--TKLKK-----LDLGKCSSLVKLPPSINA-NNLQELSLRNCS 816

Query: 422  KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
            ++ +LP  + N   L EL++   + + E+P S+     L KL +  CSS   LPS +   
Sbjct: 817  RVVKLP-AIENATKLRELKLRNCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSI--- 872

Query: 480  KSLTSLEIID---CKNFMRLPDEIGNLE-------------------------------- 504
              +T+LE+ D   C + + LP  IGNL+                                
Sbjct: 873  GDMTNLEVFDLDNCSSLVTLPSSIGNLQKLSELLMSECSKLEALPTNINLKSLYTLDLTD 932

Query: 505  ------------YLKVLTIKGTAIREVPESLGQLSSLEW--------------------- 531
                        ++  L +KGTAI+EVP S+   S L                       
Sbjct: 933  CTQLKSFPEISTHISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITD 992

Query: 532  LVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
            L+L   ++Q +P  + ++S L  L+L+N NNL  +P+  D L +   L
Sbjct: 993  LLLVSEDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQLSDSLDNYAML 1040



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 5/112 (4%)

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +L   +Y S  + SL+    +N   LP    N E+L  L +  + +R++ E   QL +L+
Sbjct: 658 ALEDLIYQSPRIRSLKWFPYQNIC-LPSTF-NPEFLVELDMSDSNLRKLWEGTKQLRNLK 715

Query: 531 WLVLSDNN-LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           W+ LSD++ L+ +P +L+  ++L  LKL N ++L  +P  ++ L+SL+ LDL
Sbjct: 716 WMDLSDSSYLKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDL 766


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 193/438 (44%), Gaps = 66/438 (15%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C R +SLPS    FK L SL    C      P+  GN+  L      GT+I E+P
Sbjct: 558 LTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGTSINEVP 617

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +  L  L +L L++C +L   S +I  L S++S+++  CS LKG P         S I
Sbjct: 618 LSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLP---------SSI 668

Query: 384 ERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
             + +   L L+ C  L  LP S+C   SL +L +  C K +  P   G++  L  LR++
Sbjct: 669 XHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLRLD 728

Query: 443 GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            T I+E+P S+  L AL  L L + SS + +              ++D          I 
Sbjct: 729 STAIKEIPSSITHLKALEYLNLSR-SSIDGV--------------VLD----------IC 763

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-N 560
           +L  LK L +    IR +P  +  LSSLE L L  N+   IP  +++LS L SL L + N
Sbjct: 764 HLLSLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLSHLTSLNLRHCN 823

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR-----NC 615
            L+++PE                    +P  LR      PS+ TS   S+        NC
Sbjct: 824 KLQQVPE--------------------LPSSLRLLDVHGPSDGTSSSPSLLPPLHSLVNC 863

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKS--MYFPGNE-IPKWFRHQSTGSTISLKTPQ 672
           L     +     +  W   S +   Y      +  PG+  IPKW +++  GS I +  PQ
Sbjct: 864 LNSAIQDSENRSRRNWNGASFSDSWYSGNGICIVIPGSSGIPKWIKNKRKGSEIEIGLPQ 923

Query: 673 PTGYNK-LMGFAFCVVVA 689
               N   +GFA   V A
Sbjct: 924 NWHLNNDFLGFALYCVYA 941



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 173/387 (44%), Gaps = 72/387 (18%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLV--------SLKRIDLKYSKLLTKLPDLSLAQ 111
           NI+H E     K PG + ++LW      V         LK I+L YS  L K+PD S   
Sbjct: 498 NIVHQE---CPKDPGGR-SRLWGSDAEFVLTKNXLLXKLKVINLSYSVNLIKIPDFSSVP 553

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSN 170
           NLEI                        L L+ C+ L SLP+S    K L+ L   GCS 
Sbjct: 554 NLEI------------------------LTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSK 589

Query: 171 LKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           L + P++      LR      G  I E+P SIK L+ + ELL+  CK+L   S +I  L 
Sbjct: 590 LTSFPEINGNMGKLRE-FNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLS 648

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            L+S+++  C  L+ L     ++   ++       L L  C     LP   C   SL +L
Sbjct: 649 SLKSLKLKGCSKLKGLPSSIXHLKALKN-------LDLSXCENLVRLPESICSLXSLETL 701

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +  C  F+  P   G++  L  L +D TAI+E+P  +  L  L  L L   S ++ +  
Sbjct: 702 FLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSR-SSIDGVVL 760

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFC-------NIDGSGIERIPSSVLKLNKCSKLES 401
            I  L S++ + +S+C N++G P   FC       N+DG+    IP+ + +L+       
Sbjct: 761 DICHLLSLKELHLSSC-NIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLSH------ 813

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPD 428
                     LTSL +  C KL+++P+
Sbjct: 814 ----------LTSLNLRHCNKLQQVPE 830


>gi|42568255|ref|NP_198990.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|42570590|ref|NP_851117.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007337|gb|AED94720.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007338|gb|AED94721.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1068

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 139/267 (52%), Gaps = 29/267 (10%)

Query: 7   EIQINPYTFSKMTELRLLK-----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           E+ +    F  M  L+ L+     F       +   +E +P   +R   W  +P K+L  
Sbjct: 541 EVSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPEDMEYIP--PVRLLHWQNYPRKSLPQ 598

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             + E+LV ++MP SK+ +LW  +Q L +LK ID+ +S  L ++P+LS A NLEIL L +
Sbjct: 599 RFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEF 658

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E   SI  L+KLE+L+++ C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 659 CKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDISSN 718

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRL----------------ENISS 222
             +  L L    IE++P S+ C S +  L I   S KRL                E+I  
Sbjct: 719 IKK--LNLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPE 776

Query: 223 SIFKLQFLESIRIHRCPNLQ-FLEMPS 248
           SI  L  L+ + ++ C  L+  L +PS
Sbjct: 777 SIIGLTRLDWLNVNSCRKLKSILGLPS 803



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 61/273 (22%)

Query: 413 TSLEIID---CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
           T+LEI+    CK L  LP  + NL  LE L VE                       CS  
Sbjct: 649 TNLEILSLEFCKSLVELPFSILNLHKLEILNVE----------------------NCSML 686

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           + +P+ + ++ SL  L++  C      PD   N   +K L +  T I +VP S+G  S L
Sbjct: 687 KVIPTNINLA-SLERLDMTGCSELRTFPDISSN---IKKLNLGDTMIEDVPPSVGCWSRL 742

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L +   +L+     L+    + SL L  +N+E IPE +  L+ L +L++   N  R  
Sbjct: 743 DHLYIGSRSLK----RLHVPPCITSLVLWKSNIESIPESIIGLTRLDWLNV---NSCRKL 795

Query: 590 EYLRSFPTSIPS--------------EFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQS 635
           + +   P+S+                 F +   ++   NCL LD     E  + G ++QS
Sbjct: 796 KSILGLPSSLQDLDANDCVSLKRVCFSFHNPIRALSFNNCLNLD-----EEARKGIIQQS 850

Query: 636 VNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           V       + +  PG +IP+ F H++TG +I++
Sbjct: 851 V------YRYICLPGKKIPEEFTHKATGRSITI 877



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 34/148 (22%)

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----C 376
           ELP  +  L  L  L ++NCS L+ I ++I  L S+E ++++ CS L+ FP+I       
Sbjct: 664 ELPFSILNLHKLEILNVENCSMLKVIPTNI-NLASLERLDMTGCSELRTFPDISSNIKKL 722

Query: 377 NIDGSGIERIPSSV------------------LKLNKC--------SKLESLPSSLCMFK 410
           N+  + IE +P SV                  L +  C        S +ES+P S+    
Sbjct: 723 NLGDTMIEDVPPSVGCWSRLDHLYIGSRSLKRLHVPPCITSLVLWKSNIESIPESIIGLT 782

Query: 411 SLTSLEIIDCKKLER---LPDELGNLEA 435
            L  L +  C+KL+    LP  L +L+A
Sbjct: 783 RLDWLNVNSCRKLKSILGLPSSLQDLDA 810


>gi|357513695|ref|XP_003627136.1| Disease resistance protein [Medicago truncatula]
 gi|355521158|gb|AET01612.1| Disease resistance protein [Medicago truncatula]
          Length = 991

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 52/383 (13%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNK-CMVHSLEGVPFTE-----LRYFEWHQFPLKT 58
           N+++ ++  TFSKM  LR+LKF    N+ C    L+   F E     LRYFEW+ +P ++
Sbjct: 379 NNDLSLSADTFSKMKGLRILKFYAPSNQSCTTTYLDLPEFLEPFSNKLRYFEWNGYPFES 438

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L      + LV ++M  S V +LW  +Q    L+ ID+   K   +LPDLS A  L+ ++
Sbjct: 439 LPKPFKAKFLVEIRMRYSIVKELWQGIQEFDKLEGIDMSECKHFVQLPDLSKASRLKWIN 498

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L  C SL + H S+   N L  L LDRC  + S+    H  +L+ + + GC++L+     
Sbjct: 499 LSGCESLVDLHPSVLCANTLVTLILDRCTKVRSVRGEKHLSFLEEISVDGCTSLEEFA-- 556

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            S  L   L L   GI+ L  SI CL  I        KRL            LES+R+  
Sbjct: 557 VSSDLIENLDLSSTGIQTLDLSIGCLPKI--------KRLN-----------LESLRLSH 597

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            P     E+PS  +   R  +   S L ++K    E       +F  L SL I+   +F 
Sbjct: 598 LPK----ELPS--VISLRELKISGSRLIVEKQQLHE-------LFDGLRSLRILHMKDFV 644

Query: 298 -----RLPDELGNLQALNRLIIDGTAIRELP-EGLGQL-ALLSKLELKNCSELEYISS-- 348
                 LP+ +  +  L  L +DG+ ++ L  E + +L  L++ L   NC+ L  +SS  
Sbjct: 645 FVNQFDLPNNIDVVSKLMELNLDGSNMKRLELECIPELPPLITVLNAVNCTSLISVSSLK 704

Query: 349 --SIFKLKSVESIEISNCSNLKG 369
             +   +   + I  SN  NL G
Sbjct: 705 NLATKMMGKTKHISFSNSLNLDG 727


>gi|227438143|gb|ACP30561.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1005

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 173/334 (51%), Gaps = 32/334 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFCG--SKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NI 61
           E+ ++   F  M  LR L      S  K  +H LEG+ +   +LR   W ++P++ + + 
Sbjct: 422 ELHVHNSAFKGMRNLRFLNIYTNQSMTKDRLHLLEGLDYLPPKLRLLSWDRYPMRCMPSK 481

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              + LV LKM GSK+ +LW+ + NL  L  +DL  S+ L ++PDLSLA NL+ L+L  C
Sbjct: 482 FCPKYLVKLKMQGSKLEKLWEGIGNLTCLDYMDLSESENLKEIPDLSLATNLKTLNLSGC 541

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           SSL +   SI+ L+KL  L++  C +L +LP+ I+ + L  + LR CS L + P +++  
Sbjct: 542 SSLVDLPLSIRNLSKLMTLEMSGCINLRTLPSGINLQSLLSVDLRKCSELNSFPDISTN- 600

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF--KLQFLESIRIHRCP 239
             S L L    IEE+PS+++ L N+  L      R+E I S      +Q L ++     P
Sbjct: 601 -ISDLDLNETAIEEIPSNLR-LQNLVSL------RMERIKSERLWASVQSLAALMTALTP 652

Query: 240 NLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEII 291
            L  L + +     T   E PSS        +L++ +C   E+LP+G  + +SL  L++ 
Sbjct: 653 LLTKLYLSNI----TSLVELPSSFQNLNKLEQLRITECIYLETLPTGMNI-ESLDYLDLS 707

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            C      P+   N+  +N   ++ T I EL + 
Sbjct: 708 GCTRLRSFPEISTNISTIN---LNNTGIEELEKA 738



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 199/515 (38%), Gaps = 100/515 (19%)

Query: 296 FERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            E+L + +GNL  L+ + + +   ++E+P+ L     L  L L  CS L  +  SI  L 
Sbjct: 497 LEKLWEGIGNLTCLDYMDLSESENLKEIPD-LSLATNLKTLNLSGCSSLVDLPLSIRNLS 555

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            + ++E+S C NL+  P         SGI       + L KCS+L S P    +  +++ 
Sbjct: 556 KLMTLEMSGCINLRTLP---------SGINLQSLLSVDLRKCSELNSFPD---ISTNISD 603

Query: 415 LEIIDCKKLERLPD--ELGNLEALEELRVEGTGIREVPKSLAQLA------LSKLKLKKC 466
           L++ +   +E +P    L NL +L   R++   +    +SLA L       L+KL L   
Sbjct: 604 LDLNETA-IEEIPSNLRLQNLVSLRMERIKSERLWASVQSLAALMTALTPLLTKLYLSNI 662

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQ 525
           +S   LPS       L  L I +C     LP  + N+E L  L + G T +R  PE    
Sbjct: 663 TSLVELPSSFQNLNKLEQLRITECIYLETLPTGM-NIESLDYLDLSGCTRLRSFPEISTN 721

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
           +S++       NN  I  E L +    VS   SN          D  S++    + E + 
Sbjct: 722 ISTINL-----NNTGI--EELEKADFTVSRIHSNK-----ASWCDSPSAV----VMETDN 765

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS 645
             +   L S P    S     +L +   NC  L    L +             E  + K 
Sbjct: 766 VHVHRTL-SAPKEASSSTYVPKLYLKFVNCFILSQEALLQ-------------ELSVLKG 811

Query: 646 MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSE----------- 694
           + FPG  +P +F H+S G ++++    P  +N L    F    AC++ E           
Sbjct: 812 LIFPGEVVPSYFTHRSIGCSLTI----PLLHNSL-SVPFFRFRACAMVELDLRLYPLSPY 866

Query: 695 -----CCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAG 749
                CCR                 DR    + S+   +     H +  H+F+       
Sbjct: 867 IVIQICCR---------------FSDRFGNSFQSFGQPHSFTPYHQKGSHLFIFDCRLLL 911

Query: 750 ENSCKRSDEFFFHI---------DRSCCEVKKCGI 775
                  DE  ++          DRS   +K CGI
Sbjct: 912 NRDNATPDELNYNQVCIEFRIIEDRSIFILKGCGI 946



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 7/175 (4%)

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQLALSK 460
           +PS  C  K L  L++    KLE+L + +GNL  L+ + + E   ++E+P       L  
Sbjct: 478 MPSKFCP-KYLVKLKM-QGSKLEKLWEGIGNLTCLDYMDLSESENLKEIPDLSLATNLKT 535

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L  CSS   LP  +     L +LE+  C N   LP  I     L V   K + +   P
Sbjct: 536 LNLSGCSSLVDLPLSIRNLSKLMTLEMSGCINLRTLPSGINLQSLLSVDLRKCSELNSFP 595

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +    +S L+   L++  ++ IP +L +L +LVSL++     ER+   +  L++L
Sbjct: 596 DISTNISDLD---LNETAIEEIPSNL-RLQNLVSLRMERIKSERLWASVQSLAAL 646


>gi|168014783|ref|XP_001759931.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689061|gb|EDQ75435.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 414

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 31/395 (7%)

Query: 140 LDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG---IEE 195
           LDL+ C +LT LP  + +   LK L L+GC  L++LP   S +L S   L   G   +  
Sbjct: 28  LDLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKLRSLPNDLS-NLTSLTILNTWGCSSLTS 86

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP+ +  L+++    +Y C  L ++ + +     L ++ I     L  L     N     
Sbjct: 87  LPNELSNLTSLTTFYMYKCSSLTSLPNELGNFTSLTTLNIGSYSRLTSLPNELGNFTSLI 146

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
           + +       ++      SLP+       LT+L+I  C +   LP+EL NL +L    I 
Sbjct: 147 TFD-------IRWYKSLISLPNELGNLTYLTTLDITWCESLALLPNELDNLTSLTTFDIS 199

Query: 316 G-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-- 372
             +++   P   G L+ L+ L+++ CS L  + + +  L S+ ++ +  CS+L   P   
Sbjct: 200 WCSSLTLFPNEFGNLSFLTTLKMRTCSSLTSLPNELENLTSLTTLNMRWCSSLTSLPNEM 259

Query: 373 ---IPFCNIDGSGIERIPS-----------SVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
                   +D SG + + S           ++L ++ CS L SLP+ L  F SL +L + 
Sbjct: 260 SNLTSLTTLDISGFKSLISLPNKLGKLTSLTILNMDGCSSLTSLPNKLGNFTSLITLSME 319

Query: 419 DCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
           +C  L  LP+E  NL +L  L + + + +  +   L  + +L+   +K+CSS  SLP+ L
Sbjct: 320 ECLSLTSLPNEFSNLTSLTILNMWKYSSLISLLNELDNIESLTTFNIKRCSSLISLPNEL 379

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
               SLT+L I  C   + LP+E+ NL  L +L +
Sbjct: 380 GNLTSLTTLNINRCSRLISLPNELKNLTSLTILNM 414



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 193/424 (45%), Gaps = 53/424 (12%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L ++V+N+  LK ++LK  + L  LP DLS   +L IL+   CSSLT   + +  
Sbjct: 34  SNLTMLPNEVKNMTLLKTLNLKGCEKLRSLPNDLSNLTSLTILNTWGCSSLTSLPNELSN 93

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L    + +C SLTSLP  + +   L  L +   S L +LP      L +   L+   
Sbjct: 94  LTSLTTFYMYKCSSLTSLPNELGNFTSLTTLNIGSYSRLTSLPN----ELGNFTSLITFD 149

Query: 193 IE------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
           I        LP+ +  L+ +  L I  C+ L  + + +  L  L +  I  C +L     
Sbjct: 150 IRWYKSLISLPNELGNLTYLTTLDITWCESLALLPNELDNLTSLTTFDISWCSSLTLFPN 209

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+    +       LK++ C    SLP+      SLT+L +  C +   LP+E+ NL
Sbjct: 210 EFGNLSFLTT-------LKMRTCSSLTSLPNELENLTSLTTLNMRWCSSLTSLPNEMSNL 262

Query: 307 QALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +L  L I G  ++  LP  LG+L  L+ L +  CS L  + + +    S+ ++ +  C 
Sbjct: 263 TSLTTLDISGFKSLISLPNKLGKLTSLTILNMDGCSSLTSLPNKLGNFTSLITLSMEECL 322

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           +L   P   F N+          ++L + K S L SL + L   +SLT+  I  C  L  
Sbjct: 323 SLTSLPN-EFSNLTS-------LTILNMWKYSSLISLLNELDNIESLTTFNIKRCSSLIS 374

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           LP+ELGNL +L  L +                       +CS   SLP+ L   K+LTSL
Sbjct: 375 LPNELGNLTSLTTLNI----------------------NRCSRLISLPNEL---KNLTSL 409

Query: 486 EIID 489
            I++
Sbjct: 410 TILN 413



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 183/389 (47%), Gaps = 34/389 (8%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
           EL L+ C     LP+       L +L +  C     LP++L NL +L  L   G +++  
Sbjct: 27  ELDLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKLRSLPNDLSNLTSLTILNTWGCSSLTS 86

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  L  L  L+   +  CS L  + + +    S+ ++ I + S L   P     N  G+
Sbjct: 87  LPNELSNLTSLTTFYMYKCSSLTSLPNELGNFTSLTTLNIGSYSRLTSLP-----NELGN 141

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
               I      +     L SLP+ L     LT+L+I  C+ L  LP+EL NL +L    +
Sbjct: 142 FTSLI---TFDIRWYKSLISLPNELGNLTYLTTLDITWCESLALLPNELDNLTSLTTFDI 198

Query: 442 EG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
              + +   P     L+ L+ LK++ CSS  SLP+ L    SLT+L +  C +   LP+E
Sbjct: 199 SWCSSLTLFPNEFGNLSFLTTLKMRTCSSLTSLPNELENLTSLTTLNMRWCSSLTSLPNE 258

Query: 500 IGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL 557
           + NL  L  L I G  ++  +P  LG+L+SL  L +   ++L  +P  L   +SL++L +
Sbjct: 259 MSNLTSLTTLDISGFKSLISLPNKLGKLTSLTILNMDGCSSLTSLPNKLGNFTSLITLSM 318

Query: 558 SN-NNLERIPERLDPLSSLKYLDLFE--------NNLDRIPEYLRSFP-------TSIPS 601
               +L  +P     L+SL  L++++        N LD I E L +F         S+P+
Sbjct: 319 EECLSLTSLPNEFSNLTSLTILNMWKYSSLISLLNELDNI-ESLTTFNIKRCSSLISLPN 377

Query: 602 EFTSLR--LSVDLRNCLKLD--PNELSEI 626
           E  +L    ++++  C +L   PNEL  +
Sbjct: 378 ELGNLTSLTTLNINRCSRLISLPNELKNL 406



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 21/190 (11%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           L+ L+L+  S  + +P+  +   ++  L++  C N   LP+E+ N+  LK L +KG   +
Sbjct: 1   LNVLQLRNYSFIKKIPNLFFEISTILELDLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKL 60

Query: 517 REVPESLGQLSSLEWL-VLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSS 574
           R +P  L  L+SL  L     ++L  +P  L+ L+SL +  +   ++L  +P  L   +S
Sbjct: 61  RSLPNDLSNLTSLTILNTWGCSSLTSLPNELSNLTSLTTFYMYKCSSLTSLPNELGNFTS 120

Query: 575 LKYLDLFE-NNLDRIPEYLRSFPT-------------SIPSEFTSLRL--SVDLRNC--L 616
           L  L++   + L  +P  L +F +             S+P+E  +L    ++D+  C  L
Sbjct: 121 LTTLNIGSYSRLTSLPNELGNFTSLITFDIRWYKSLISLPNELGNLTYLTTLDITWCESL 180

Query: 617 KLDPNELSEI 626
            L PNEL  +
Sbjct: 181 ALLPNELDNL 190



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 63  HWENLVSLKMPGS-KVTQLWDDVQNLVSLKRIDL-KYSKLLTKLPDLSLAQNLEILDLGY 120
           ++ +L++L M     +T L ++  NL SL  +++ KYS L++ L +L   ++L   ++  
Sbjct: 309 NFTSLITLSMEECLSLTSLPNEFSNLTSLTILNMWKYSSLISLLNELDNIESLTTFNIKR 368

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP 152
           CSSL    + +  L  L  L+++RC  L SLP
Sbjct: 369 CSSLISLPNELGNLTSLTTLNINRCSRLISLP 400


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 178/385 (46%), Gaps = 56/385 (14%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCG--SKNKCMVHSLEGVPF---------TELRYFEWHQ 53
           N+ + +   TF+KM  LR+LKF    S  KC +      P+          +LRYFEW+ 
Sbjct: 532 NNVLPLTSDTFTKMKALRILKFHAPSSLQKCTI----TYPYLPKFLKLFSKKLRYFEWYG 587

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           +P ++L    H + LV ++MP S V QLW  ++ L  L+ IDL   K L KLPD S A +
Sbjct: 588 YPFESLPQPFHAKFLVEIRMPHSNVKQLWQGMKELGKLEGIDLSECKHLIKLPDFSKASS 647

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L+ ++L  C SL +   S+   + L  L L RC  +TS+    H   L+++ + GC +LK
Sbjct: 648 LKWVNLSGCESLVDLPPSVLCADMLVTLILHRCTKITSVRGEKHLNCLEKISVDGCKSLK 707

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
                 S +L   L L   GI+ L  SI  L  +        KRL            L+S
Sbjct: 708 IFA--VSSNLIENLDLSSTGIQTLDLSIGSLEKL--------KRLN-----------LDS 746

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           ++++  P            +G  S     SELK+            + +F  L SL+I+ 
Sbjct: 747 LKLNCLP------------EGLSSV-TSISELKISGSALIVEKQLLEELFDGLQSLQILH 793

Query: 293 CPNF---ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS- 348
             +F     LP+ +  L  L  L +DG+ ++ LPE + +L  L  L L NC ELE I   
Sbjct: 794 MKDFINQFELPNNIHVLSKLKELNLDGSNMKRLPESIKKLEELEILSLVNCRELECIPEL 853

Query: 349 --SIFKLKSVESIEISNCSNLKGFP 371
              +  L +V    + + SNLKG  
Sbjct: 854 PPLVTLLNAVNCTSLVSVSNLKGLA 878



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 217/521 (41%), Gaps = 92/521 (17%)

Query: 282  FKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLEL 337
             K L  LE ID   C +  +LPD      +L  + + G  ++ +LP  +    +L  L L
Sbjct: 619  MKELGKLEGIDLSECKHLIKLPD-FSKASSLKWVNLSGCESLVDLPPSVLCADMLVTLIL 677

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSVLKL 393
              C+++  +      L  +E I +  C +LK F      I   ++  +GI+ +  S+  L
Sbjct: 678  HRCTKITSVRGEKH-LNCLEKISVDGCKSLKIFAVSSNLIENLDLSSTGIQTLDLSIGSL 736

Query: 394  NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
             K  +L                  +D  KL  LP+ L ++ ++ EL++ G+ +    + L
Sbjct: 737  EKLKRLN-----------------LDSLKLNCLPEGLSSVTSISELKISGSALIVEKQLL 779

Query: 454  AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
             +L            F+ L       +SL  L + D  N   LP+ I  L  LK L + G
Sbjct: 780  EEL------------FDGL-------QSLQILHMKDFINQFELPNNIHVLSKLKELNLDG 820

Query: 514  TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
            + ++ +PES+ +L  LE L L +   L+ IPE    L  LV+L  + N        L  +
Sbjct: 821  SNMKRLPESIKKLEELEILSLVNCRELECIPE----LPPLVTLLNAVN-----CTSLVSV 871

Query: 573  SSLKYL-DLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
            S+LK L  +       I     SF  S+  +  SL L ++      L+   +S + ++  
Sbjct: 872  SNLKGLATMMMGKTKHI-----SFSNSLNLDGHSLSLIME-----NLNLTMMSAVFQNVS 921

Query: 632  MKQ---SVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
            +++    V+   Y +     PG  IP+ F+ Q+   +    T  P   N L+GF + VV+
Sbjct: 922  VRRLRVKVHSYNYNSVDACRPGTSIPRLFKCQTAADSSITITLLPERSN-LLGFIYSVVL 980

Query: 689  ACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLG-KISHVESDHVFLGSSIF 747
            + +     +        +C+L          G +   +S+L   ++ + SDH ++    F
Sbjct: 981  SPAGGNGMKKGEARIKCQCSL----------GKEGIKASWLNTHVTELNSDHTYVWYDPF 1030

Query: 748  AGENSCKRSD-----EFFFHIDR-----SCCEVKKCGIHFV 778
              ++  K        EF+   D      S   +K+CG+  V
Sbjct: 1031 HCDSILKFYQPKICFEFYVTNDTTGEVDSSIHIKECGVRQV 1071


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 188/373 (50%), Gaps = 36/373 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK-----NKCMVHSLEGVPF---TELRYFEWH 52
           MS++   I++ P  F+ +++L+ LKF  S      +   +     VP     EL Y  W 
Sbjct: 539 MSEVR-RIKLFPAAFTMLSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQ 597

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            +P   L +    + LV L +  S + QLW+D +N  SL+ +DL  SK L  L  LS A+
Sbjct: 598 GYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAK 657

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE LDL  C+SL +   S++ +N+L  L+L  C SL SLP     K LK L+L GC  L
Sbjct: 658 NLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKL 716

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K+   ++      +L L G  IE +   I+ L ++  L + +C++L+ + + ++KL+ L+
Sbjct: 717 KDFHIISES--IESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQ 774

Query: 232 SIRIHRCPNLQFL----EMPSC----NIDGTRSKEQPS----SELKLKKCPRP------- 272
            + +  C  L+ L    E   C     +DGT  K+ P     S LK+    RP       
Sbjct: 775 ELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKICSFCRPVIDDSTG 834

Query: 273 -ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
              LP     F  L+ L + +C N ++LPD+  +L++L  L +    I  LPE + +L  
Sbjct: 835 LVVLPFSGNSF--LSDLYLTNC-NIDKLPDKFSSLRSLRCLCLSRNNIETLPESIEKLYS 891

Query: 332 LSKLELKNCSELE 344
           L  L+LK+C  L+
Sbjct: 892 LLLLDLKHCCRLK 904



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 217/526 (41%), Gaps = 115/526 (21%)

Query: 348  SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
            S + + K++E +++  C++L         ++ GS  +      L L  C+ LESLP    
Sbjct: 651  SGLSRAKNLERLDLEGCTSL---------DLLGSVKQMNELIYLNLRDCTSLESLPKGF- 700

Query: 408  MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKC 466
              KSL +L +  C KL+   D     E++E L +EGT I  V + +  L +L  L LK C
Sbjct: 701  KIKSLKTLILSGCLKLK---DFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNC 757

Query: 467  SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
               + LP+ LY  KSL  L +  C     LP     +E L++L + GT+I++ PE +  L
Sbjct: 758  EKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPE-MSCL 816

Query: 527  SSLEW------LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
            S+L+       ++     L ++P S N  S L  L L+N N++++P++   L SL+ L L
Sbjct: 817  SNLKICSFCRPVIDDSTGLVVLPFSGN--SFLSDLYLTNCNIDKLPDKFSSLRSLRCLCL 874

Query: 581  FENNLDRIPEYLR----------------------------------------SFPTSIP 600
              NN++ +PE +                                         S P +IP
Sbjct: 875  SRNNIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYLDAHGCGSLENVSKPLTIP 934

Query: 601  SEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK-----------SMYFP 649
                 +  +    +C KL+  E  +I+    +K  +   T               ++ FP
Sbjct: 935  LVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHNHKGLLLDPLVAVCFP 994

Query: 650  GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNL 709
            G++IP WF HQ  GS I          +K +G + CVVV     E             N 
Sbjct: 995  GHDIPSWFSHQKMGSLIETDLLPHWCNSKFIGASLCVVVTFKDHE---------GHHANR 1045

Query: 710  FDVVCDRRSE--------------GYDSYTSSYLGKISHVESDHVFLGSS-----IFA-- 748
              V C  + +              G++    S   +   + SDHVF+  +     +F   
Sbjct: 1046 LSVRCKSKFKSQNGQFISFSFCLGGWNESCGSSCHEPRKLGSDHVFISYNNCNVPVFKWS 1105

Query: 749  -----GENSCKRSDEFFFHIDR------SCCEVKKCGIHFVHAQRQ 783
                 G      S  F F++         CCE+ +CG++F++A+ +
Sbjct: 1106 EETNEGNRCHPTSASFEFYLTDETERKLECCEILRCGMNFLYARDE 1151



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 30/260 (11%)

Query: 237 RCPNLQFLEMPSC---NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
           R  NL+ L++  C   ++ G+  +      L L+ C   ESLP G    KSL +L +  C
Sbjct: 655 RAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKG-FKIKSLKTLILSGC 713

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
               +L D     +++  L ++GTAI  + E +  L  L  L LKNC +L+Y+ + ++KL
Sbjct: 714 L---KLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKL 770

Query: 354 KSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIP--SSVLKLNKCS------- 397
           KS++ + +S CS L+  P I           +DG+ I++ P  S +  L  CS       
Sbjct: 771 KSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKICSFCRPVID 830

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
               L  LP S   F  L+ L + +C  +++LPD+  +L +L  L +    I  +P+S+ 
Sbjct: 831 DSTGLVVLPFSGNSF--LSDLYLTNC-NIDKLPDKFSSLRSLRCLCLSRNNIETLPESIE 887

Query: 455 Q-LALSKLKLKKCSSFESLP 473
           +  +L  L LK C   +SLP
Sbjct: 888 KLYSLLLLDLKHCCRLKSLP 907


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 249/555 (44%), Gaps = 101/555 (18%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           NL  + +  +K+T++ D +  L++L ++DL Y+++ TK+P+ L+   NL  L L Y + +
Sbjct: 288 NLTQIILHNNKITEIPDALAKLINLTQLDLSYNQI-TKIPEALAKLTNLTQLIL-YSNQI 345

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           TE    I  L  L  LDL     +T +P +                   L K+T+    +
Sbjct: 346 TEIPEVIAKLTNLTQLDLS-YNQITKIPEA-------------------LAKLTNL---T 382

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    I E+P ++  L N+ ++ I S  R+  I  ++ KL            NL  L
Sbjct: 383 QLILYSNRISEIPEALAKLINLTQI-ILSYNRISEIPEALAKL-----------TNLTQL 430

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
           ++    I                       +P       +LT + I+       +P+ L 
Sbjct: 431 DLSYNQIT---------------------KIPEALAKLINLTQI-ILHSNKITEIPEALA 468

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            L  L +L +    I E+PE L +L  L++L L + +++  I  ++ KL        SN 
Sbjct: 469 KLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSD-NQIIKIPKALAKL--------SNL 519

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEI 417
           + L         +++ + I  IP ++ KL   ++L         +P +L    +LT L++
Sbjct: 520 TQL---------DLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDL 570

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
                +  +P+ +  L  L +L +  + I E+P+ +A+L  L++L L   +    +P  +
Sbjct: 571 GTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLT-SNQIAEIPEAI 629

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
               +LT L I+       +P+ I  L  L  L +    I ++PE++ +L++L  L+LS 
Sbjct: 630 AKLTNLTQL-ILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSY 688

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP------- 589
           N +  IPE++ +L++L  L L++N +  IP+ +  L++L  LDL  N +  IP       
Sbjct: 689 NQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYNRISEIPLEILDSK 748

Query: 590 ------EYLRSFPTS 598
                  YLR   TS
Sbjct: 749 DPKEILNYLRQISTS 763



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 158/627 (25%), Positives = 299/627 (47%), Gaps = 73/627 (11%)

Query: 25  KFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-----NILHWENLVSLKMPGSKV-- 77
           K  G+  K +   L G+P   LR  +    PL+++      ILH E L+ +++  +++  
Sbjct: 63  KVSGNNLKTLPLELLGLP--NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPE 120

Query: 78  --------TQLWDDVQNLVSLKRIDLKYSKL---------LTKLPDLSLAQNLEILDLGY 120
                   TQL+ +  ++  +  +  K S L         +T++P+ ++A+   + +L  
Sbjct: 121 AIANLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPE-AIAKLSNLRELHV 179

Query: 121 CSS-LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN-LKNLPKMT 178
            S+ +TE   +I  L+ L  L +     +T +P +I +K +    L+  SN +  +P++ 
Sbjct: 180 SSNQITEIPEAIANLSNLRELHVS-SNQITEIPEAI-AKLINLRELQVSSNKITEIPEVI 237

Query: 179 S--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           +   +LR  L L    I E+P  I  L+N+ +L + S  ++  IS ++ KL  L  I +H
Sbjct: 238 AKLTNLRK-LYLRNNQITEIPEVIAKLTNLTQLDL-SYNQITKISEALAKLINLTQIILH 295

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES---------LPSGQC-----MF 282
              N +  E+P          +   S  ++ K P   +         L S Q      + 
Sbjct: 296 ---NNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVI 352

Query: 283 KSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             LT+L  +D       ++P+ L  L  L +LI+    I E+PE L +L  L+++ L + 
Sbjct: 353 AKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIIL-SY 411

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPE-----IPFCNI--DGSGIERIPSSVLKL 393
           + +  I  ++ KL ++  +++S  + +   PE     I    I    + I  IP ++ KL
Sbjct: 412 NRISEIPEALAKLTNLTQLDLS-YNQITKIPEALAKLINLTQIILHSNKITEIPEALAKL 470

Query: 394 NKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                     +++  +P +L    +LT L + D + + ++P  L  L  L +L +    I
Sbjct: 471 TNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQII-KIPKALAKLSNLTQLDLNRNKI 529

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
            E+P++LA+L  L++L L+  +    +P  L    +LT L++    N   +P+ I  L  
Sbjct: 530 TEIPEALAKLTNLTQLYLRN-NRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTN 588

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L  L +  + I E+PE + +L++L  L L+ N +  IPE++ +L++L  L L++N +  I
Sbjct: 589 LTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEI 648

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYL 592
           PE +  L++L  L+L  N + +IPE +
Sbjct: 649 PEAIAKLTNLTQLNLTSNQITKIPEAI 675



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/598 (25%), Positives = 280/598 (46%), Gaps = 67/598 (11%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS-L 124
           NL  L +  +++T++ + + NL +L+ + +  S  +T++P+ ++A+ + + +L   S+ +
Sbjct: 173 NLRELHVSSNQITEIPEAIANLSNLRELHVS-SNQITEIPE-AIAKLINLRELQVSSNKI 230

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRL------VLRGCSNLKNLPKM 177
           TE    I  L  L  L L R   +T +P  I     L +L      + +    L  L  +
Sbjct: 231 TEIPEVIAKLTNLRKLYL-RNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINL 289

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           T   L +        I E+P ++  L N+ +L + S  ++  I  ++ KL  L  + ++ 
Sbjct: 290 TQIILHNN------KITEIPDALAKLINLTQLDL-SYNQITKIPEALAKLTNLTQLILYS 342

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
               Q  E+P      T   +   S  ++ K P  E+L        +LT L I+      
Sbjct: 343 N---QITEIPEVIAKLTNLTQLDLSYNQITKIP--EAL----AKLTNLTQL-ILYSNRIS 392

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+ L  L  L ++I+    I E+PE L +L  L++L+L + +++  I  ++ KL ++ 
Sbjct: 393 EIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDL-SYNQITKIPEALAKLINLT 451

Query: 358 SIEISNCSNLKGFPEI--PFCNIDG-----SGIERIPSSVLKLNKCSKLE-------SLP 403
            I I + + +   PE      N+       + I  IP ++ KL   ++L         +P
Sbjct: 452 QI-ILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIP 510

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
            +L    +LT L++ +  K+  +P+ L  L  L +L +    I E+P++LA+L  L++L 
Sbjct: 511 KALAKLSNLTQLDL-NRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLD 569

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           L    +   +P  +    +LT L +   +    +P+ I  L  L  L +    I E+PE+
Sbjct: 570 LGTNYNISEIPEAITKLTNLTQLNLTSSQ-ITEIPEVIAKLTNLTQLNLTSNQIAEIPEA 628

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           + +L++L  L+L+ N +  IPE++ +L++L  L L++N + +IPE +  L++L  L L  
Sbjct: 629 IAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSY 688

Query: 583 NNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLD--PNELSEI 626
           N +  IPE +                T IP   T       L N  +LD   N +SEI
Sbjct: 689 NQITEIPEAIAKLTNLTQLILTSNQITEIPDAITK------LTNLTQLDLSYNRISEI 740


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 163/323 (50%), Gaps = 27/323 (8%)

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           LR+  W+ +  K+L      E LV L++  S +  LW   ++L SL+++DL  SK L + 
Sbjct: 612 LRWLVWNHYSWKSLPENFKPEKLVHLELRWSSLHYLWKKTEHLPSLRKLDLSLSKSLVQT 671

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
           PD +   NLE L+L YCS L E H S+ Y  KL  L+L  C  L   P  I+ + L+ L 
Sbjct: 672 PDFTGMPNLEYLNLEYCSKLEEVHYSLAYCEKLIELNLSWCTKLRRFPY-INMESLESLD 730

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGVG--IEELPSSIKCLSNIGELLIYSCKRLENISS 222
           L+ C  +   P++    ++  L +L     I ELPSS++  +++ EL +   + LE + S
Sbjct: 731 LQYCYGIMVFPEIIGT-MKPELMILSANTMITELPSSLQYPTHLTELDLSGMENLEALPS 789

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCN------IDGTRS--KEQPSSELKLKKCP---- 270
           SI KL+ L  + +  C  L+ L     +      +D +R+   + PSS ++L K      
Sbjct: 790 SIVKLKDLVKLNVSYCLTLKSLPEEIGDLENLEELDASRTLISQPPSSIVRLNKLKSLKL 849

Query: 271 -RPESLPSGQCMF-----KSLTSLEIID--CPNFE--RLPDELGNLQALNRLIIDGTAIR 320
            +  +L    C         L SLEI++    NFE  R+P+++G L +L  L ++G    
Sbjct: 850 MKRNTLTDDVCFVFPPVNNGLLSLEILELGSSNFEDGRIPEDIGCLSSLKELRLEGDNFN 909

Query: 321 ELPEGLGQLALLSKLELKNCSEL 343
            LP+ + QL  L  L +K+C  L
Sbjct: 910 HLPQSIAQLGALRFLYIKDCRSL 932



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 38/310 (12%)

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
           + E LPS + +  SL S  ++  P+F  +P    NL+ LN  +   + + E+   L    
Sbjct: 650 KTEHLPSLRKLDLSL-SKSLVQTPDFTGMP----NLEYLN--LEYCSKLEEVHYSLAYCE 702

Query: 331 LLSKLELKNCSELE---YISSSIFKLKSVESIEISNCSNLKGFPEI-----PFCNI--DG 380
            L +L L  C++L    YI+     ++S+ES+++  C  +  FPEI     P   I    
Sbjct: 703 KLIELNLSWCTKLRRFPYIN-----MESLESLDLQYCYGIMVFPEIIGTMKPELMILSAN 757

Query: 381 SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
           + I  +PSS+        L L+    LE+LPSS+   K L  L +  C  L+ LP+E+G+
Sbjct: 758 TMITELPSSLQYPTHLTELDLSGMENLEALPSSIVKLKDLVKLNVSYCLTLKSLPEEIGD 817

Query: 433 LEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY--VSKSLTSLEIID 489
           LE LEEL    T I + P S+ +L  L  LKL K ++       ++  V+  L SLEI++
Sbjct: 818 LENLEELDASRTLISQPPSSIVRLNKLKSLKLMKRNTLTDDVCFVFPPVNNGLLSLEILE 877

Query: 490 --CKNF--MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPE 544
               NF   R+P++IG L  LK L ++G     +P+S+ QL +L +L + D  +L  +PE
Sbjct: 878 LGSSNFEDGRIPEDIGCLSSLKELRLEGDNFNHLPQSIAQLGALRFLYIKDCRSLTSLPE 937

Query: 545 SLNQLSSLVS 554
              QL ++ +
Sbjct: 938 FPPQLDTIFA 947



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 189/427 (44%), Gaps = 68/427 (15%)

Query: 309  LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS------ 362
            L  L+ +  + + LPE      L+  LEL+  S L Y+      L S+  +++S      
Sbjct: 612  LRWLVWNHYSWKSLPENFKPEKLV-HLELR-WSSLHYLWKKTEHLPSLRKLDLSLSKSLV 669

Query: 363  NCSNLKGFPEIPFCNIDG-SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLT 413
               +  G P + + N++  S +E +  S+        L L+ C+KL   P      +SL 
Sbjct: 670  QTPDFTGMPNLEYLNLEYCSKLEEVHYSLAYCEKLIELNLSWCTKLRRFP--YINMESLE 727

Query: 414  SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESL 472
            SL++  C  +   P+ +G ++    +    T I E+P SL     L++L L    + E+L
Sbjct: 728  SLDLQYCYGIMVFPEIIGTMKPELMILSANTMITELPSSLQYPTHLTELDLSGMENLEAL 787

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS----- 527
            PS +   K L  L +  C     LP+EIG+LE L+ L    T I + P S+ +L+     
Sbjct: 788  PSSIVKLKDLVKLNVSYCLTLKSLPEEIGDLENLEELDASRTLISQPPSSIVRLNKLKSL 847

Query: 528  ------------------------SLEWLVLSDNNLQI--IPESLNQLSSLVSLKLSNNN 561
                                    SLE L L  +N +   IPE +  LSSL  L+L  +N
Sbjct: 848  KLMKRNTLTDDVCFVFPPVNNGLLSLEILELGSSNFEDGRIPEDIGCLSSLKELRLEGDN 907

Query: 562  LERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP 620
               +P+ +  L +L++L + +  +L  +PE    FP  + + F     S DL  C  L  
Sbjct: 908  FNHLPQSIAQLGALRFLYIKDCRSLTSLPE----FPPQLDTIFAD--WSNDLI-CKSLFL 960

Query: 621  NELSEIIKDGWMKQSVNGETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGY-NK 678
            N  S        + +++    ++  ++   G+ IP WF HQ T +++S+  P+     + 
Sbjct: 961  NISS-------FQHNISASDSLSLRVFTSLGSSIPIWFHHQGTDTSVSVNLPENWYVSDN 1013

Query: 679  LMGFAFC 685
             +GFA C
Sbjct: 1014 FLGFAVC 1020


>gi|449481499|ref|XP_004156201.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 688

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 147/286 (51%), Gaps = 23/286 (8%)

Query: 18  MTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPG 74
           MT LR+LK         VH  E + +   +LR+  WH +PLKTL +  +  NL+ L++P 
Sbjct: 1   MTNLRILKLNN------VHLSEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPN 54

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S +  LW   +++ +LK I+L  S+ L+K PD S   NLE L L  C  L + H S+  L
Sbjct: 55  SSIHHLWTASKSMETLKVINLSDSQFLSKTPDFSGVPNLERLVLSGCVELHQLHHSLGNL 114

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVG 192
           N L  LDL  CK LT++P +I  + LK LVL GCSNL + PK++S   HL   L L    
Sbjct: 115 NHLIQLDLRNCKKLTNIPFNISLESLKILVLSGCSNLTHFPKISSNMNHLLE-LHLDETS 173

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           I+ L SSI  L+++  L + +C  L  + S+I  L  L+++ ++ C  L  L     +I 
Sbjct: 174 IKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDIS 233

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
                +  S+            +      F+ LT LEI++C    R
Sbjct: 234 SLEKLDITST-----------CVNQAPMSFQLLTKLEILNCQGLSR 268



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 48/296 (16%)

Query: 283 KSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS+ +L++I   D     + PD  G +  L RL++ G   + +L   LG L  L +L+L+
Sbjct: 65  KSMETLKVINLSDSQFLSKTPDFSG-VPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLR 123

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV- 390
           NC +L  I  +I  L+S++ + +S CSNL  FP+I          ++D + I+ + SS+ 
Sbjct: 124 NCKKLTNIPFNI-SLESLKILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIG 182

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                  L L  C+ L  LPS++    SL +L +  C KL+ LP+ LG++ +LE+L +  
Sbjct: 183 HLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITS 242

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFES------LPSRLYVSK----------------- 480
           T + + P S     L+KL++  C            P+  +  K                 
Sbjct: 243 TCVNQAPMSFQ--LLTKLEILNCQGLSRKFLHSLFPTWKFTRKFSNYSQGLKVTNWFTFG 300

Query: 481 -SLTSLEIIDCKNF-MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            SL  L + DC  +   LP+++ +L  L++L +      ++PES+  L +L  L L
Sbjct: 301 CSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKNHFTKLPESICHLVNLRDLFL 356



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 151/370 (40%), Gaps = 84/370 (22%)

Query: 285 LTSLEIIDCPNFERLPDELGNL-QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +T+L I+   N   L +E+  L   L  L   G  ++ LP       LL +LEL N S  
Sbjct: 1   MTNLRILKLNNV-HLSEEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLL-ELELPNSSIH 58

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
              ++S    KS+E++++ N S+ +   + P    D SG+  +    L L+ C +L  L 
Sbjct: 59  HLWTAS----KSMETLKVINLSDSQFLSKTP----DFSGVPNLER--LVLSGCVELHQLH 108

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELG-----------------------NLEALEELR 440
            SL     L  L++ +CKKL  +P  +                        N+  L EL 
Sbjct: 109 HSLGNLNHLIQLDLRNCKKLTNIPFNISLESLKILVLSGCSNLTHFPKISSNMNHLLELH 168

Query: 441 VEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           ++ T I+ +  S+  L +L  L LK C+    LPS +    SL +L +  C     LP+ 
Sbjct: 169 LDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPES 228

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLE----------------------------- 530
           +G++  L+ L I  T + + P S   L+ LE                             
Sbjct: 229 LGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSRKFLHSLFPTWKFTRKFSNYS 288

Query: 531 -------WLV---------LSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
                  W           LSD NL    +P  L  L+SL  L LS N+  ++PE +  L
Sbjct: 289 QGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSKNHFTKLPESICHL 348

Query: 573 SSLKYLDLFE 582
            +L+ L L E
Sbjct: 349 VNLRDLFLVE 358



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 21/252 (8%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L L+ C +  ++P    + +SL  L +  C N    P    N+  L  L +D T+I+ L
Sbjct: 119 QLDLRNCKKLTNIPFNISL-ESLKILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVL 177

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
              +G L  L  L LKNC++L  + S+I  L S++++ ++ CS L   PE      D S 
Sbjct: 178 HSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLG---DISS 234

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER--LPDELGNLEALEELR 440
           +E++  +   +N+       P S   F+ LT LEI++C+ L R  L       +   +  
Sbjct: 235 LEKLDITSTCVNQA------PMS---FQLLTKLEILNCQGLSRKFLHSLFPTWKFTRKFS 285

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFES-LPSRLYVSKSLTSLEIIDC--KNFMRLP 497
               G++         +L  L L  C+ ++  LP+ L   +SL SL+I+     +F +LP
Sbjct: 286 NYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDL---RSLASLQILHLSKNHFTKLP 342

Query: 498 DEIGNLEYLKVL 509
           + I +L  L+ L
Sbjct: 343 ESICHLVNLRDL 354



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 18/231 (7%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLE-SLPSS-----LCMFKSLTSLEII---DCKK 422
           ++ F N  G  ++ +PS+    N  + LE  LP+S         KS+ +L++I   D + 
Sbjct: 24  QLRFLNWHGYPLKTLPSN---FNPTNLLELELPNSSIHHLWTASKSMETLKVINLSDSQF 80

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
           L + PD  G +  LE L + G   + ++  SL  L  L +L L+ C    ++P  + + +
Sbjct: 81  LSKTPDFSG-VPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNISL-E 138

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           SL  L +  C N    P    N+ +L  L +  T+I+ +  S+G L+SL  L L +  +L
Sbjct: 139 SLKILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDL 198

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             +P ++  L+SL +L L+  + L+ +PE L  +SSL+ LD+    +++ P
Sbjct: 199 LKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITSTCVNQAP 249


>gi|224146780|ref|XP_002336335.1| predicted protein [Populus trichocarpa]
 gi|222834747|gb|EEE73210.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 196/472 (41%), Gaps = 92/472 (19%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L  C  L SLPS +     L  L +  C KL+  P+  GN + L +L ++ T I E+P
Sbjct: 21  VNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELP 80

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+  L  L  L LK C     LPS +   KSL +L +  C     LP+  G LE L  L
Sbjct: 81  PSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECLNEL 140

Query: 510 TIKGTAIREVPESLGQLSSLE-----------------W--------------------- 531
            + GTAIRE P S+  L +L+                 W                     
Sbjct: 141 DVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLP 200

Query: 532 ----------LVLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
                     L LS+ NL    +P  +  LSSL  L LS N    +P  +D LS LK+L 
Sbjct: 201 SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLKFLY 260

Query: 580 LFE----NNLDRIP---EYLRSFP---------TSIPSEFTSLRLSVDLRNCLKLDPNEL 623
           + +     +L ++P   E LR            +S P +F  L  S    NC +L  ++ 
Sbjct: 261 MEDCKMLQSLPQLPPNLELLRVNGCTSLEKMQFSSNPYKFNCL--SFCFINCWRLSESDC 318

Query: 624 SEIIKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLM 680
              +    +++   G   + +  S++ PG+EIP WF HQS GS++S++TP  +  N + +
Sbjct: 319 WNNMFHTLLRKCFQGPPNLIEVFSVFIPGSEIPTWFSHQSEGSSVSVQTPPHSLENDECL 378

Query: 681 GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKI------SH 734
           G+A C  +     + C    +  D   +   + C      Y S  S +   I       +
Sbjct: 379 GYAVCASLE---YDGCASSELLTDYWVSGVPISCFFNGVNYGSVMSYFHRGIEMQWKRDN 435

Query: 735 VESDH---VFLGS--SIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
           + SDH   +F  S   IF       R     F   R   +V KCG+  V+ Q
Sbjct: 436 IPSDHLWYLFFPSRFKIF------DRHVSLRFETYRPQIKVIKCGVRPVYHQ 481



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 41/328 (12%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
           C  L+E HSSI + NKL  ++L  C+SLTSLP+ I     L+ L L GCS LK  P++  
Sbjct: 2   CRRLSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEG 61

Query: 180 CH--LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
               LR  L L    IEELP SI+ L  +  L +  CK+L  + SSI  L+ L+++ +  
Sbjct: 62  NKKCLRK-LCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSG 120

Query: 238 CPNLQFLE--------MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           C  L+ L         +   ++ GT  +E P S   LK     + L    C   S ++  
Sbjct: 121 CSELENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNL---KILSFHGCAESSRSTTN 177

Query: 290 IIDCPNFERLPDELGN-----------LQALNRLIIDGTAIRE--LPEGLGQLALLSKLE 336
           I     F  +P +  N           L +L RL +    + E  +P  +G L+ L +L 
Sbjct: 178 IWQRLMFPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLN 237

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           L   ++   + +SI +L  ++ + + +C  L+  P++P  N++          +L++N C
Sbjct: 238 LSR-NKFVSLPTSIDQLSGLKFLYMEDCKMLQSLPQLP-PNLE----------LLRVNGC 285

Query: 397 SKLESLPSSLCMFK-SLTSLEIIDCKKL 423
           + LE +  S   +K +  S   I+C +L
Sbjct: 286 TSLEKMQFSSNPYKFNCLSFCFINCWRL 313



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 25/266 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           + L  C    SLPS       L  L +  C   +  P+  GN + L +L +D T+I ELP
Sbjct: 21  VNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELP 80

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFC 376
             +  L  L  L LK+C +L  + SSI  LKS++++ +S CS L+  PE       +   
Sbjct: 81  PSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECLNEL 140

Query: 377 NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN---- 432
           ++ G+ I   P S+  L     L+ L    C   S ++  I        +P +  N    
Sbjct: 141 DVSGTAIREPPVSIFSLK---NLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSL 197

Query: 433 -------LEALEELRVEGTGIRE--VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSL 482
                  L +L  L +    + E  VP  +  L +L +L L + + F SLP+ +     L
Sbjct: 198 VLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSR-NKFVSLPTSIDQLSGL 256

Query: 483 TSLEIIDCKNFMRLPDEIGNLEYLKV 508
             L + DCK    LP    NLE L+V
Sbjct: 257 KFLYMEDCKMLQSLPQLPPNLELLRV 282


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 260/616 (42%), Gaps = 110/616 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   + L  L   G+ +T+L   + +L  L  + +  +KL    P +   Q L +L +G 
Sbjct: 55  IGRLQKLSRLDAHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIG- 113

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPKMT 178
            + LTE    +  L  LEVLD+   K L++ P  +    L++L + G   + L  L K+ 
Sbjct: 114 DNRLTEVPPGVFLLPNLEVLDVSNNK-LSTFPPGVEK--LQKLRVLGIYDNQLTELQKLR 170

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH-- 236
             H+       G  + E+PS +  L N+ E+L  S  +L      + KLQ L  + I+  
Sbjct: 171 ELHIN------GNQLTEVPSGVCSLPNL-EVLSVSNNKLSTFPPGVEKLQKLRELHINGN 223

Query: 237 ----------RCPNLQFL------------------EMPSCNIDGTR------------- 255
                       PNL+ L                  ++   +I G +             
Sbjct: 224 QLTEVPSGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGV 283

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLI 313
            K Q   EL++      E +P G C   SL +LE++D  N      P  +  LQ L +L 
Sbjct: 284 EKLQKLRELRIYGNQLAE-VPRGVC---SLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLH 339

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN---------- 363
           I+G  + E+P G+  L  L +L + N ++L      + KL+ +  + I            
Sbjct: 340 INGNQLTEVPSGVCSLPNLEELSVYN-NKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGV 398

Query: 364 CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLE 416
           CS     P +   ++  + +   P  V KL K        ++L  +PS +C   SL +LE
Sbjct: 399 CS----LPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVC---SLPNLE 451

Query: 417 II--DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           ++  +  KL   P  +  L+ L EL V G  + E+P  +  L   ++ +   +    LP 
Sbjct: 452 VVYVNNNKLSTFPPGVERLQKLRELHVHGNQLTEIPPVVCYLTNLEVLIISDNPIRHLPD 511

Query: 475 ---------RLYVS-----------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                     LYVS           K+L  L    CK F  LPDE+GNL++L  L++   
Sbjct: 512 GVRRLTRLKTLYVSGCQFPGQVLQLKTLEKLHAGGCK-FDMLPDEVGNLQHLWFLSLSSN 570

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            +R +P ++  L +L  + L  N     PE L  L ++  L +SNNN+ R+P  L     
Sbjct: 571 LLRTLPSTMSHLHNLREVHLDKNKFDTFPEVLCDLPAMEKLFISNNNITRLPTALHRADK 630

Query: 575 LKYLDLFENNLDRIPE 590
           LK LD+  N L   P+
Sbjct: 631 LKDLDVSGNPLTYPPQ 646



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 240/553 (43%), Gaps = 92/553 (16%)

Query: 85  QNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC----SSLTETHSSIQYLNKLEVL 140
           Q +  L  +DL  ++ LT +P+    +  +I DL +     + LT    +I  L KL  L
Sbjct: 10  QTVDGLLTLDLS-NQGLTSIPE----EVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRL 64

Query: 141 DLDRCKSLTSLPTSIHSKYLKRLV-LRGCSN-LKNLPKMTSCHLRSTLPLLGVG---IEE 195
           D      LT LP +I S  L++L  L   SN L NLP          L LL +G   + E
Sbjct: 65  D-AHGNMLTRLPQAIGS--LQKLTHLYVYSNKLANLPP--GIEKLQKLTLLSIGDNRLTE 119

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           +P  +  L N+ E+L  S  +L      + KLQ L  + I+     +  ++   +I+G +
Sbjct: 120 VPPGVFLLPNL-EVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQ 178

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLI 313
             E                +PSG C   SL +LE++   N      P  +  LQ L  L 
Sbjct: 179 LTE----------------VPSGVC---SLPNLEVLSVSNNKLSTFPPGVEKLQKLRELH 219

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN--CSNLKGFP 371
           I+G  + E+P G+  L  L  L + N ++L      + KL+ +  ++I    C N K   
Sbjct: 220 INGNQLTEVPSGVCSLPNLEVLSVYN-NKLSTFPPGVEKLQKLRQLDIYGVKCHNNK--- 275

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCK--K 422
                      +   P  V KL K        ++L  +P  +C   SL +LE++D    K
Sbjct: 276 -----------LSTFPPGVEKLQKLRELRIYGNQLAEVPRGVC---SLPNLEVLDVSNSK 321

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL--KKCSSF----ESLPS- 474
           L   P  +  L+ L +L + G  + EVP  +  L  L +L +   K S+F    E L   
Sbjct: 322 LSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKL 381

Query: 475 -RLYVSK-----------SLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            +LY+             SL +LE++   N      P  +  L+ L+ L I    + EVP
Sbjct: 382 RQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVP 441

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
             +  L +LE + +++N L   P  + +L  L  L +  N L  IP  +  L++L+ L +
Sbjct: 442 SGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQLTEIPPVVCYLTNLEVLII 501

Query: 581 FENNLDRIPEYLR 593
            +N +  +P+ +R
Sbjct: 502 SDNPIRHLPDGVR 514



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 204/481 (42%), Gaps = 58/481 (12%)

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPK-MTSCHLRSTLPL 188
           Q ++ L  LDL   + LTS+P  +    +  L   G SN  L ++P+ +      S L  
Sbjct: 10  QTVDGLLTLDLSN-QGLTSIPEEVFD--ITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDA 66

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCPNLQF 243
            G  +  LP +I  L  +  L +YS K L N+   I KLQ L  +     R+   P   F
Sbjct: 67  HGNMLTRLPQAIGSLQKLTHLYVYSNK-LANLPPGIEKLQKLTLLSIGDNRLTEVPPGVF 125

Query: 244 LEMPSCNI-DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
           L +P+  + D + +K                + P G    + L  L I D        ++
Sbjct: 126 L-LPNLEVLDVSNNKL--------------STFPPGVEKLQKLRVLGIYD--------NQ 162

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L  LQ L  L I+G  + E+P G+  L  L  L + N ++L      + KL+ +  + I 
Sbjct: 163 LTELQKLRELHINGNQLTEVPSGVCSLPNLEVLSVSN-NKLSTFPPGVEKLQKLRELHI- 220

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK- 421
              N     E+P      SG+  +P+  +     +KL + P  +   + L  L+I   K 
Sbjct: 221 ---NGNQLTEVP------SGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKC 271

Query: 422 ---KLERLPDELGNLEALEELRVEGTGIREVPK---SLAQLALSKLKLKKCSSFESLPSR 475
              KL   P  +  L+ L ELR+ G  + EVP+   SL  L +  +   K S+F     +
Sbjct: 272 HNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEK 331

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L   + L     I+      +P  + +L  L+ L++    +   P  + +L  L  L + 
Sbjct: 332 LQKLRQLH----INGNQLTEVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIY 387

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L  +P  +  L +L  L + NN L   P  ++ L  L+ L +++N L  +P  + S 
Sbjct: 388 GNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSL 447

Query: 596 P 596
           P
Sbjct: 448 P 448


>gi|108738464|gb|ABG00765.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738466|gb|ABG00766.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 241/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  QL  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSQLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSQLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 182/416 (43%), Gaps = 71/416 (17%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHW 64
            E  +N   FS MT LR+LK     N  +   L+ +   +LR+  WH +P K L    H 
Sbjct: 576 GESHLNAKVFSTMTNLRILKI---NNVSLCGELDYLS-DQLRFLSWHGYPSKYLPPNFHP 631

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           ++++ L++P S +  LW   + L  LK ++L  S+ ++K PD S   NLE L L  C  L
Sbjct: 632 KSILELELPNSFIHYLWKGSKRLDRLKTVNLSDSQFISKTPDFSGVPNLERLILSGCVRL 691

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           T+ H S+  L +L  LDL  CK+L ++P SI  + L  L L  CS+LKN P +       
Sbjct: 692 TKLHQSLGSLKRLIQLDLKNCKALKAIPFSISLESLIVLSLSNCSSLKNFPNIVGNMKNL 751

Query: 185 T-LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           T L L G  I+EL  SI  L+ +  L + +C  L  + ++I  L  L+++ +H C  L  
Sbjct: 752 TELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCSKL-- 809

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPES-LPSGQCMFKSLTSLEIIDCPNFER---- 298
                     TR  E       L+K     + +       + LT+LEI+DC    R    
Sbjct: 810 ----------TRIPESLGFIASLEKLDVTNTCINQAPLSLQLLTNLEILDCRGLSRKFIH 859

Query: 299 -------------------------------------------LPDELGNLQALNRLIID 315
                                                      +PD L +L +L  L + 
Sbjct: 860 SLFPSWNSSSYSSQLGLKFTYCLSSFCSMKKLNLSDCSLKDGDIPDNLQSLPSLEILDLS 919

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK-SVESIEISNCSNLKGF 370
           G +   LP+ +  L  L  L L NC  L+ +     KL  SV S+E  +C +LK +
Sbjct: 920 GNSFSFLPKSVEHLVNLRTLYLVNCKRLQELP----KLPLSVRSVEARDCVSLKEY 971



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 155/334 (46%), Gaps = 69/334 (20%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLS 333
           L  G      L ++ + D     + PD  G +  L RLI+ G   + +L + LG L  L 
Sbjct: 647 LWKGSKRLDRLKTVNLSDSQFISKTPDFSG-VPNLERLILSGCVRLTKLHQSLGSLKRLI 705

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERI 386
           +L+LKNC  L+ I  SI  L+S+  + +SNCS+LK FP I          ++DG+ I+ +
Sbjct: 706 QLDLKNCKALKAIPFSI-SLESLIVLSLSNCSSLKNFPNIVGNMKNLTELHLDGTSIQEL 764

Query: 387 PSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
             S+        L L  C+ L  LP+++     L +L +  C KL R+P+ LG + +LE+
Sbjct: 765 HPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCSKLTRIPESLGFIASLEK 824

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR--- 495
           L V  T I + P SL                          + LT+LEI+DC+   R   
Sbjct: 825 LDVTNTCINQAPLSL--------------------------QLLTNLEILDCRGLSRKFI 858

Query: 496 -----------LPDEIG-NLEY-------LKVLTIKGTAIR--EVPESLGQLSSLEWLVL 534
                         ++G    Y       +K L +   +++  ++P++L  L SLE L L
Sbjct: 859 HSLFPSWNSSSYSSQLGLKFTYCLSSFCSMKKLNLSDCSLKDGDIPDNLQSLPSLEILDL 918

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
           S N+   +P+S+  L +L +L L N   L+ +P+
Sbjct: 919 SGNSFSFLPKSVEHLVNLRTLYLVNCKRLQELPK 952



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 181/390 (46%), Gaps = 57/390 (14%)

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNL-QALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
           +F ++T+L I+   N   L  EL  L   L  L   G   + LP      ++L +LEL N
Sbjct: 584 VFSTMTNLRILKINNVS-LCGELDYLSDQLRFLSWHGYPSKYLPPNFHPKSIL-ELELPN 641

Query: 340 CSELEYI---SSSIFKLKSV---ESIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSV-- 390
            S + Y+   S  + +LK+V   +S  IS   +  G P +    + G   + ++  S+  
Sbjct: 642 -SFIHYLWKGSKRLDRLKTVNLSDSQFISKTPDFSGVPNLERLILSGCVRLTKLHQSLGS 700

Query: 391 ------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
                 L L  C  L+++P S+ + +SL  L + +C  L+  P+ +GN++ L EL ++GT
Sbjct: 701 LKRLIQLDLKNCKALKAIPFSISL-ESLIVLSLSNCSSLKNFPNIVGNMKNLTELHLDGT 759

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            I+E+  S+  L  L  L L+ C++   LP+ +     L +L +  C    R+P+ +G +
Sbjct: 760 SIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCSKLTRIPESLGFI 819

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE------------------- 544
             L+ L +  T I + P SL  L++LE L     + + I                     
Sbjct: 820 ASLEKLDVTNTCINQAPLSLQLLTNLEILDCRGLSRKFIHSLFPSWNSSSYSSQLGLKFT 879

Query: 545 -SLNQLSSLVSLKLSNNNLER--IPERLDPLSSLKYLDLFENNLDRIP---EYLRSFPT- 597
             L+   S+  L LS+ +L+   IP+ L  L SL+ LDL  N+   +P   E+L +  T 
Sbjct: 880 YCLSSFCSMKKLNLSDCSLKDGDIPDNLQSLPSLEILDLSGNSFSFLPKSVEHLVNLRTL 939

Query: 598 ---------SIPSEFTSLRLSVDLRNCLKL 618
                     +P    S+R SV+ R+C+ L
Sbjct: 940 YLVNCKRLQELPKLPLSVR-SVEARDCVSL 968


>gi|357515097|ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
 gi|355521859|gb|AET02313.1| NBS resistance protein [Medicago truncatula]
          Length = 1731

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 181/368 (49%), Gaps = 39/368 (10%)

Query: 6   SEIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN-I 61
           + + + P TF KM  LRLL F    G K+  + H L  +P   LRYF W  +PLKTL   
Sbjct: 545 THVNLRPDTFEKMKNLRLLAFQDQKGVKSVSLPHGLGLLP-ENLRYFLWDGYPLKTLPPT 603

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              E LV L + GS V +LW+ V N+ +L++IDL  S  L + P++S + NL+ + L  C
Sbjct: 604 FCLEMLVELSLTGSLVEKLWNGVLNVPNLEKIDLSGSTKLIECPNVSGSPNLKYVLLDEC 663

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            S+ E  SSI +L KLEVL++  C SL S+ ++  S  L++L    C NLK+L       
Sbjct: 664 ESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCSPALRQLSAINCFNLKDLSVPFDYL 723

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G    ELPSS+    N+G         L N++ +     F++ I + +  N 
Sbjct: 724 DGLGLSLTGWDGNELPSSLLHAKNLGNFFFPISDCLVNLTEN-----FVDRICLVKQRNC 778

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           Q  + P   +D            K+   P           F+S+ +L  +D P    +PD
Sbjct: 779 Q--QDPFITLD------------KMFTSPG----------FQSVKNLVFVDIPMLSEIPD 814

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS-SIFKLKSVESIE 360
            +  L +L  LI+   AI+ LPE +  L  L  +++ +C  L+ I + S F    ++ + 
Sbjct: 815 SISLLSSLESLILFDMAIKSLPETVKYLPQLKFVDIHDCKLLQSIPALSQF----IQILV 870

Query: 361 ISNCSNLK 368
           + NC +L+
Sbjct: 871 VWNCESLE 878


>gi|108738476|gb|ABG00771.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  ++  LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEHCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEHCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEHCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 173/380 (45%), Gaps = 46/380 (12%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILH 63
           + E  +N   FS MT L++L+     N  +   LE +  ++LR   WH +P + L +   
Sbjct: 564 HGESHLNTKFFSAMTGLKVLRV---HNVFLSGDLEYLS-SKLRLLSWHGYPFRNLPSDFQ 619

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
              L+ L +  S +   W + + L  LK I+L  SK L K PDLS   NLE L L  C  
Sbjct: 620 PNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCIR 679

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHL 182
           L E H S+  L  L  LDL  CKSL S+ ++I  + LK L+L GCS L+N P++  +  L
Sbjct: 680 LQELHLSVGILKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKL 739

Query: 183 RSTLPLLGVGIEE------------------------LPSSIKCLSNIGELLIYSCKRLE 218
            + L L G  I +                        LP++I CL++I  L +  C +L+
Sbjct: 740 LTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLD 799

Query: 219 NISSSIFKLQFLESIRI------HRCPNLQFL-EMPSCNIDGTRSKEQPSSELKLKKCPR 271
            I  S+  +  LE + +      H   +L+ L  + + N  G  S++   S   L   PR
Sbjct: 800 QIPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLKALNCKGL-SRKLCHSLFPLWSTPR 858

Query: 272 PESLPSG-----QCM--FKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELP 323
                S       C   F S+  L   DC   +  +PD+L  L +L+ L +       LP
Sbjct: 859 SNDSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLP 918

Query: 324 EGLGQLALLSKLELKNCSEL 343
             LGQL  L  L L NCS L
Sbjct: 919 NSLGQLINLRCLVLDNCSRL 938



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 151/303 (49%), Gaps = 39/303 (12%)

Query: 285 LTSLEIIDCPNFERL---PDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNC 340
           L  L++I+  N + L   PD L  +  L RL+++G   ++EL   +G L  L  L+LK+C
Sbjct: 643 LDKLKVINLSNSKFLLKTPD-LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDC 701

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV--- 390
             L+ I S+I  L+S++ + +S CS L+ FPEI          ++DG+ I ++ +S+   
Sbjct: 702 KSLKSICSNI-SLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKL 760

Query: 391 -----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
                L L  C  L +LP+++    S+  L +  C KL+++PD LGN+  LE+L V GT 
Sbjct: 761 TSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCLEKLDVSGTS 820

Query: 446 IREVPKSLAQLALSK------LKLKKCSSFESLPSRLYVSKSLT-SLEIIDCKNFMRLPD 498
           I  +P SL  L   K      L  K C S   L S    + S +  L +I C        
Sbjct: 821 ISHIPLSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRSNDSHSFGLRLITC-------- 872

Query: 499 EIGNLEYLKVLTIKG--TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
              N   +KVL       A  ++P+ L  LSSL +L LS N    +P SL QL +L  L 
Sbjct: 873 -FSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLV 931

Query: 557 LSN 559
           L N
Sbjct: 932 LDN 934



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 162/362 (44%), Gaps = 63/362 (17%)

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLI-IDGTAIRELPEGLGQLALLSKLELKN 339
            F ++T L+++   N   L  +L  L +  RL+   G   R LP       LL +L L+N
Sbjct: 573 FFSAMTGLKVLRVHNV-FLSGDLEYLSSKLRLLSWHGYPFRNLPSDFQPNELL-ELNLQN 630

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            S +E       KL  ++ I +SN   L   P++         +ER     L LN C +L
Sbjct: 631 -SCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTV----PNLER-----LVLNGCIRL 680

Query: 400 ESLPSSLCMFKSLTSLEIIDCK-----------------------KLERLPDELGNLEAL 436
           + L  S+ + K L  L++ DCK                       +LE  P+ +GN++ L
Sbjct: 681 QELHLSVGILKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLL 740

Query: 437 EELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            EL ++GT IR++  S+ +L +L  L L+ C +  +LP+ +    S+  L +  C    +
Sbjct: 741 TELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQ 800

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE------------------WLVLSDN 537
           +PD +GN+  L+ L + GT+I  +P SL  L++L+                  W     N
Sbjct: 801 IPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRSN 860

Query: 538 N-----LQIIPESLNQLSSLVSLKLSNNNLE--RIPERLDPLSSLKYLDLFENNLDRIPE 590
           +     L++I    +   S+  L  S+  L    IP+ L  LSSL +LDL  N    +P 
Sbjct: 861 DSHSFGLRLIT-CFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPN 919

Query: 591 YL 592
            L
Sbjct: 920 SL 921



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 114/260 (43%), Gaps = 49/260 (18%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGTAIR 320
           L LK C   +S+    C   SL SL+I+    C   E  P+ +GN++ L  L +DGTAIR
Sbjct: 696 LDLKDCKSLKSI----CSNISLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIR 751

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------I 373
           +L   +G+L  L  L+L+NC  L  + ++I  L S++ + +  CS L   P+       +
Sbjct: 752 KLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCL 811

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKL--ESLPSSLCM----------------------- 408
              ++ G+ I  IP S+  L     L  + L   LC                        
Sbjct: 812 EKLDVSGTSISHIPLSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRSNDSHSFGLRLIT 871

Query: 409 ----FKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
               F S+  L   DCK  +  +PD+L  L +L  L +       +P SL QL  L  L 
Sbjct: 872 CFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLV 931

Query: 463 LKKCSSFESLP----SRLYV 478
           L  CS   SLP    S LYV
Sbjct: 932 LDNCSRLRSLPKFPVSLLYV 951



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 115/215 (53%), Gaps = 13/215 (6%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P+ +L+LN + S +E+          L  + + + K L + PD L  +  LE L + G  
Sbjct: 620 PNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPD-LSTVPNLERLVLNGCI 678

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEII---DCKNFMRLPDEI 500
            ++E+  S+  L  L  L LK C S +S+ S +    SL SL+I+    C      P+ +
Sbjct: 679 RLQELHLSVGILKHLIFLDLKDCKSLKSICSNI----SLESLKILILSGCSRLENFPEIV 734

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN 559
           GN++ L  L + GTAIR++  S+G+L+SL  L L +  NL  +P ++  L+S+  L L  
Sbjct: 735 GNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGG 794

Query: 560 -NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
            + L++IP+ L  +S L+ LD+   ++  IP  LR
Sbjct: 795 CSKLDQIPDSLGNISCLEKLDVSGTSISHIPLSLR 829


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 172/367 (46%), Gaps = 41/367 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVP--FTELRYFEWHQFPLKTL-N 60
           +I +   TF  MT+LR LKF    G K    VH  E +   F +L+Y EW+ +PLK+L  
Sbjct: 618 DIHVQADTFKLMTKLRFLKFHIPNGKKKLGTVHLPENIMPFFDKLKYLEWNGYPLKSLPE 677

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             H E L+ + +P S +  LW  +Q +V+L+ IDL   K    LPDLS A  L+ L L  
Sbjct: 678 PFHAEQLIQICLPHSNIEHLWHGMQEVVNLEVIDLSECKKFRSLPDLSGALKLKQLRLSG 737

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C  L E   S    + L+ L LDRC  L SL    H   LK   ++GC +LK     +  
Sbjct: 738 CEELCELQPSAFSKDTLDTLLLDRCIKLESLMGEKHLTSLKYFSVKGCKSLKEFSLSSDS 797

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
             R  L L   GI+ L  S+  ++N+  L +     L N+   +  L+ L  +R+ +C  
Sbjct: 798 INR--LDLSKTGIKILHPSLGDMNNLIWLNLEDLN-LTNLPIELSHLRSLTELRVSKCNV 854

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           +            T+SK               E+L  G  + + L      DC N   LP
Sbjct: 855 V------------TKSK--------------LEALFDGLTLLRLLHLK---DCCNLIELP 885

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
             + +L++L+ L +DG+++ ELP  +  L+ L    L NCS+L  +        S++  +
Sbjct: 886 ANISSLESLHELRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPL---SIKEFQ 942

Query: 361 ISNCSNL 367
             NC++L
Sbjct: 943 ADNCTSL 949



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 192/462 (41%), Gaps = 69/462 (14%)

Query: 260  PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
            P+ + KL     PE++      F  L  LE    P  + LP+   + + L ++ +  + I
Sbjct: 640  PNGKKKLGTVHLPENI---MPFFDKLKYLEWNGYP-LKSLPEPF-HAEQLIQICLPHSNI 694

Query: 320  RELPEGLGQLALLSKLELKNCSELEYIS--SSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
              L  G+ ++  L  ++L  C +   +   S   KLK    + +S C  L        C 
Sbjct: 695  EHLWHGMQEVVNLEVIDLSECKKFRSLPDLSGALKLKQ---LRLSGCEEL--------CE 743

Query: 378  IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE---IIDCKKLER--------- 425
            +  S   +     L L++C KLESL       K LTSL+   +  CK L+          
Sbjct: 744  LQPSAFSKDTLDTLLLDRCIKLESLMGE----KHLTSLKYFSVKGCKSLKEFSLSSDSIN 799

Query: 426  -----------LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS--SFES 471
                       L   LG++  L  L +E   +  +P  L+ L +L++L++ KC+  +   
Sbjct: 800  RLDLSKTGIKILHPSLGDMNNLIWLNLEDLNLTNLPIELSHLRSLTELRVSKCNVVTKSK 859

Query: 472  LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
            L +       L  L + DC N + LP  I +LE L  L + G+++ E+P S+  LS LE 
Sbjct: 860  LEALFDGLTLLRLLHLKDCCNLIELPANISSLESLHELRLDGSSVEELPASIKYLSELEI 919

Query: 532  LVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
              L + + L+ +PE          L LS    +   +    L ++  L  F  N+    +
Sbjct: 920  QSLDNCSKLRCLPE----------LPLSIKEFQ--ADNCTSLITVSTLKTFSINMIGQKK 967

Query: 591  YLRSFPTSIPSEFTSLRLS-VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFP 649
            Y+ SF  SI  E     L  +     L +       ++   +  Q+ +   Y    +  P
Sbjct: 968  YI-SFKNSIMLELDGPSLDCITEDAVLTMKSAAFHNVLVRKYRFQT-HSFNYNRAEVCLP 1025

Query: 650  GNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
            G  +P+ F+H+ST S     +      +K +G  F VVV+ S
Sbjct: 1026 GRRVPREFKHRSTTS-----SSITVNISKSLGCIFAVVVSPS 1062


>gi|297811961|ref|XP_002873864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319701|gb|EFH50123.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 129/227 (56%), Gaps = 10/227 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS-KNKC----MVHSLEGVPFTELRYFEWHQFP 55
           MS+I+ ++ I+   F KM  L+ L+   S  +K     + H L+ +P  +LR   W  +P
Sbjct: 547 MSEIDGQVYISEKAFEKMPNLQFLRLYNSIPDKAAEFDLPHGLDYLP-RKLRLLHWDSYP 605

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           +K + +    E LV L M  SK+ +LW+ +Q L SLK +DL  S  +  +P+LS A+NLE
Sbjct: 606 IKCMPSKFRPEFLVELTMRDSKLEKLWEGIQPLTSLKYMDLSASTNIGDIPNLSRAKNLE 665

Query: 115 ILDLGYCSSL-TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            L L +C +L T   S++Q LNKL+VLD+  C  L +LPT+I+ + L  L LRGCS LK 
Sbjct: 666 KLYLRFCENLVTVPSSALQNLNKLKVLDMSCCIKLKTLPTNINLESLSVLNLRGCSKLKR 725

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
            P +++      + L    IE++PS IK  S +  L +  CK L  I
Sbjct: 726 FPFIST--QIQFMSLGETAIEKVPSQIKLCSRLVSLEMAGCKNLRTI 770



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 51/232 (21%)

Query: 296 FERLPDELGNLQALNRL---IIDGTAIRELPEGLGQL----------------------- 329
           FE++P    NLQ L RL   I D  A  +LP GL  L                       
Sbjct: 561 FEKMP----NLQFL-RLYNSIPDKAAEFDLPHGLDYLPRKLRLLHWDSYPIKCMPSKFRP 615

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L +L +++ S+LE +   I  L S++ +++S  +N+   P +         +E+    
Sbjct: 616 EFLVELTMRD-SKLEKLWEGIQPLTSLKYMDLSASTNIGDIPNLS----RAKNLEK---- 666

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLEALEELRVEG-TG 445
            L L  C  L ++PSS    ++L  L+++D   C KL+ LP  + NLE+L  L + G + 
Sbjct: 667 -LYLRFCENLVTVPSS--ALQNLNKLKVLDMSCCIKLKTLPTNI-NLESLSVLNLRGCSK 722

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           ++  P    Q+    L     ++ E +PS++ +   L SLE+  CKN   +P
Sbjct: 723 LKRFPFISTQIQFMSLGE---TAIEKVPSQIKLCSRLVSLEMAGCKNLRTIP 771


>gi|108738444|gb|ABG00755.1| disease resistance protein [Arabidopsis thaliana]
          Length = 544

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 232/541 (42%), Gaps = 125/541 (23%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L
Sbjct: 54  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +     +   K L++L L GCS+L  LP+                      +I  ++++ 
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPE----------------------NIGAMTSLK 151

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ---PSSEL 264
           ELL+     ++N+  SI +LQ LE + +  C   +  E+P C I   +S E+     + L
Sbjct: 152 ELLLDGTA-IKNLPESINRLQNLEILSLRGC---KIQELPLC-IGTLKSLEKLYLDDTAL 206

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           K        +LPS     K+L  L ++ C +  ++PD +  L++L +L I+G+A+ ELP 
Sbjct: 207 K--------NLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPL 258

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFK-----------------------LKSVESIEI 361
               L  L      +C  L+ + SSI +                       L  +  +E+
Sbjct: 259 KPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELEL 318

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            NC  LK  P+       +   N++GS IE +P    KL K                L  
Sbjct: 319 RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK----------------LVE 362

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                 
Sbjct: 363 LRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS----------------- 405

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLE 530
                 +L  LE++  K   R+ +            + GT+      EVP S  +L  LE
Sbjct: 406 ------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLE 448

Query: 531 WLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI 588
            L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R+
Sbjct: 449 ELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRL 508

Query: 589 P 589
           P
Sbjct: 509 P 509



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 67/377 (17%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPS 388
           + + CS+L      +  LK +E + +S CS+L   PE       +    +DG+ I+ +P 
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPE 165

Query: 389 SV--------LKLNKC----------------------SKLESLPSSLCMFKSLTSLEII 418
           S+        L L  C                      + L++LPSS    K+L  L ++
Sbjct: 166 SINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSXGDLKNLQDLHLV 225

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIRE------------------------VPKSLA 454
            C  L ++PD +  L++L++L + G+ + E                        VP S+ 
Sbjct: 226 RCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIG 285

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           +L          +  E+LP  +     +  LE+ +CK    LP  IG+++ L  L ++G+
Sbjct: 286 RLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGS 345

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            I E+PE  G+L  L  L +S+   L+ +PES   L SL  L +    +  +PE    LS
Sbjct: 346 NIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS 405

Query: 574 SLKYLDLFENNLDRIPE 590
           +L  L++ +  L RI E
Sbjct: 406 NLMVLEMLKKPLFRISE 422



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P     
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSXGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 179/418 (42%), Gaps = 70/418 (16%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCM---VHSLEGVPFTELRYFEWHQFPL-----K 57
           S++ + P     MT L+ L   G+  K +   ++ L+ +    LR  +  + PL     K
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 58  TLNILHWENLVSLKMPGS----------------KVTQLWDDVQNLVSLKRIDLKYSKLL 101
           +L  L+ ++     +P S                 ++++ D +  L SLK++ +  S + 
Sbjct: 195 SLEKLYLDDTALKNLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAV- 253

Query: 102 TKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
            +LP   S   +L     G C  L +  SSI  LN L  L L     + +LP  I +  +
Sbjct: 254 EELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST-PIEALPEEIGALHF 312

Query: 160 LKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           ++ L LR C  LK LPK +       +L L G  IEELP     L  + EL + +CK L+
Sbjct: 313 IRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLK 372

Query: 219 NISSSIFKLQ-----FLESIRIHRCP-------NLQFLEM--------PSCNIDGTRSKE 258
            +  S   L+     +++   +   P       NL  LEM           N+ GT  + 
Sbjct: 373 RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEE- 431

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE---RLPDELGNLQALNRLIID 315
                      PR   +P+    F  L  LE +D  ++    ++PD+L  L  L +L + 
Sbjct: 432 -----------PRFVEVPNS---FSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLG 477

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
                 LP  L +L+ L +L L++C EL+ +     KL   E + ++NC +L+   ++
Sbjct: 478 NNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKL---EQLNLANCFSLESVSDL 532


>gi|108738556|gb|ABG00810.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 232/541 (42%), Gaps = 125/541 (23%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L
Sbjct: 54  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +     +   K L++L L GCS+L  LP+                      +I  ++++ 
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPE----------------------NIGAMTSLK 151

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ---PSSEL 264
           ELL+     ++N+  SI +LQ LE + +  C   +  E+P C I   +S E+     + L
Sbjct: 152 ELLLDGTA-IKNLPESINRLQNLEILSLRGC---KIQELPLC-IGTLKSLEKLYLDDTAL 206

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           K        +LPS     K+L  L ++ C +  ++PD +  L++L +L I+G+A+ ELP 
Sbjct: 207 K--------NLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPL 258

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFK-----------------------LKSVESIEI 361
               L  L      +C  L+ + SSI +                       L  +  +E+
Sbjct: 259 KPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELEL 318

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            NC  LK  P+       +   N++GS IE +P    KL K                L  
Sbjct: 319 RNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEK----------------LVE 362

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                 
Sbjct: 363 LRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS----------------- 405

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLE 530
                 +L  LE++  K   R+ +            + GT+      EVP S  +L  LE
Sbjct: 406 ------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLE 448

Query: 531 WLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI 588
            L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R+
Sbjct: 449 ELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRL 508

Query: 589 P 589
           P
Sbjct: 509 P 509



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D         S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYILNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|332330339|gb|AEE43925.1| TIR-NBS-LRR resistance protein muRdr1A [Rosa multiflora]
          Length = 1119

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 181/390 (46%), Gaps = 77/390 (19%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
           E   N   FSKM +LRLL          +H+L    G  +    LR+ +W  +P K L  
Sbjct: 549 EADWNLEAFSKMCKLRLL---------YIHNLRLSLGPKYLPNALRFLKWSWYPSKYLPP 599

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                 L  L +P S +  LW+ ++ L  LK IDL YS  L + PD +   NLE L L  
Sbjct: 600 GFEPAELAELSLPYSNIDHLWNGIKYLGKLKSIDLSYSINLRRTPDFTGIPNLEKLILEG 659

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L E H SI  L +L + +L  C S+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 660 CTNLVEIHPSIALLKRLRIWNLRNCTSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQ 719

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S   L G  +E+LPSSI       ELL  S   L                      
Sbjct: 720 TKRLSKFCLGGTAVEKLPSSI-------ELLPESLVEL---------------------- 750

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLK-------------KCPRP-ESLPSGQCMFKSL 285
                     +++GT  +EQP S L LK             K P+P   L +       L
Sbjct: 751 ----------DLNGTVIREQPHS-LFLKQNLIVSSFGSFRRKSPQPLIPLIASLKHLSFL 799

Query: 286 TSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           T+L++ DC   E  +P+++G+L +L +L + G     LP  +  L+ L  + ++NC  L+
Sbjct: 800 TTLKLNDCNLCEGEIPNDIGSLSSLEKLELRGNNFVSLPASIHLLSKLYFINVENCKRLQ 859

Query: 345 YISSSIFKLKSVESIEIS--NCSNLKGFPE 372
            +     +L + +S+ ++  NC++L+ FP+
Sbjct: 860 QLP----ELPARQSLRVTTNNCTSLQVFPD 885



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 228/492 (46%), Gaps = 63/492 (12%)

Query: 320  RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK------GFPEI 373
            + LP G  + A L++L L   S ++++ + I  L  ++SI++S   NL+      G P +
Sbjct: 595  KYLPPGF-EPAELAELSLP-YSNIDHLWNGIKYLGKLKSIDLSYSINLRRTPDFTGIPNL 652

Query: 374  PFCNIDGSG--IERIPSSVL-------KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
                ++G    +E  PS  L        L  C+ ++SLPS + M + L + ++  C KL+
Sbjct: 653  EKLILEGCTNLVEIHPSIALLKRLRIWNLRNCTSIKSLPSEVNM-EFLETFDVSGCSKLK 711

Query: 425  RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK-KCSSFESLPSRLYVSKSL- 482
             +P+ +G  + L +  + GT + ++P S+  L  S ++L    +     P  L++ ++L 
Sbjct: 712  MIPEFVGQTKRLSKFCLGGTAVEKLPSSIELLPESLVELDLNGTVIREQPHSLFLKQNLI 771

Query: 483  -TSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-----GTAIREVPESLGQLSSLEWLVLSD 536
             +S      K+   L   I +L++L  LT            E+P  +G LSSLE L L  
Sbjct: 772  VSSFGSFRRKSPQPLIPLIASLKHLSFLTTLKLNDCNLCEGEIPNDIGSLSSLEKLELRG 831

Query: 537  NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENN---LDRIPEYL 592
            NN   +P S++ LS L  + + N   L+++PE    L + + L +  NN   L   P+  
Sbjct: 832  NNFVSLPASIHLLSKLYFINVENCKRLQQLPE----LPARQSLRVTTNNCTSLQVFPD-P 886

Query: 593  RSFPTSIPSEFTSLRLSVDLRNCLKLDPNE-----LSEIIKDGWMKQSVNGETYITKSMY 647
            + FP   P+  T    S+   NCL    N+     +  ++K  W++Q  N  ++      
Sbjct: 887  QVFPEP-PNLSTPWNFSLISVNCLSAVGNQDASYFIYSVLKR-WIEQG-NHRSFEFFKYI 943

Query: 648  FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKC 707
             PG+EIP WF +QS G +++ K P     +K +GFA C ++           +V D+ K 
Sbjct: 944  IPGSEIPDWFNNQSVGDSVTEKLPSDECNSKWIGFAVCALIVPP-------SAVPDEIK- 995

Query: 708  NLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSD-----EFFFH 762
                V C   + G     +     +  + S H+FL  ++ A  +  K  +     +F F 
Sbjct: 996  ----VFCSWNAYGTGLIGTGTGSWLKQIVSGHLFL--AVLASPSRRKPPENCLEVKFVFK 1049

Query: 763  IDRSCCEVKKCG 774
            +D  C  +KKCG
Sbjct: 1050 VD-PCSHLKKCG 1060


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 47/346 (13%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPD---ELGNLQALNRLIIDGTAIRELPEGLGQLA 330
           +LP+     ++L  L + D  + ++LPD   +L NLQ LN  +    ++++LPE + QL 
Sbjct: 97  TLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLN--LTSNLSLKKLPENITQLK 154

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN--LKGFPEIPFCNIDGSGIERIPS 388
            L  L L   S +   ++    ++  ES+ I + ++  L   PE      + S +  +  
Sbjct: 155 KLKVLNLNGSSRIILPAN----IQLPESLRILHMNDHLLTTLPE------NFSQLHNL-- 202

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
            VL L K S L +LP+++   K+LT L + +   L +LP  +G L++LE+L ++G  +  
Sbjct: 203 KVLNL-KSSGLVALPNNIGQLKNLTILNLRE-NYLTKLPTSIGQLKSLEKLDLQGNQLTI 260

Query: 449 VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P S+ QL +L KL L   +   +LP+ +   K+L  L  ++      L D+IG L+ LK
Sbjct: 261 LPISIGQLKSLKKLDLG-ANQLTTLPTSIGQLKNLQQL-FLEVNTLTSLLDDIGKLKQLK 318

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES---------------------- 545
           VL ++   +  +P S+G+L SL WL LS N L  +P+S                      
Sbjct: 319 VLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLT 378

Query: 546 -LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L QL SL  L L++NNL  +PE +  L  L+YL L  N LDR+PE
Sbjct: 379 ILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPE 424



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 205/415 (49%), Gaps = 35/415 (8%)

Query: 196 LPSSIKCLSNIGEL-LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
           LP++I  L N+ +L L Y+  +L  + +S  KLQ LE + + R    +F  +P+     +
Sbjct: 52  LPANIGELKNLKKLNLEYN--QLTTLPASFAKLQNLEELNLTRN---KFTTLPA-----S 101

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
            +K Q   EL L      + LP      K+L  L +    + ++LP+ +  L+ L  L +
Sbjct: 102 VTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNL 161

Query: 315 DGT------AIRELPEGLGQLA----LLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           +G+      A  +LPE L  L     LL+ L  +N S+L  +   +  LKS   + + N 
Sbjct: 162 NGSSRIILPANIQLPESLRILHMNDHLLTTLP-ENFSQLHNLK--VLNLKSSGLVALPN- 217

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEI 417
            N+     +   N+  + + ++P+S+ +L    KL+        LP S+   KSL  L++
Sbjct: 218 -NIGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDL 276

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
               +L  LP  +G L+ L++L +E   +  +   + +L   K+   + +   +LP+ + 
Sbjct: 277 -GANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIG 335

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             KSL  L +   K   RLP   G L+ L+ L ++G   + +   LGQL SL+ L L+ N
Sbjct: 336 RLKSLRWLSLSSNK-LTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASN 394

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           NL  +PE++ QL  L  L L  N L+R+PE +  L  L+YLDL  N L  +PE L
Sbjct: 395 NLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESL 449



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 247/546 (45%), Gaps = 103/546 (18%)

Query: 28  GSKNKCMVHSLEGVPFTELRY---FEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDV 84
             +NK  +   E +   E  Y    E +Q      NI   +NL  L +  +++T L    
Sbjct: 20  AQENKVYMSLTEALKTPEQVYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASF 79

Query: 85  QNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
             L +L+ ++L  +K  T    ++  QNLE L+L    SL +   +I+ L  L+ L+L  
Sbjct: 80  AKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTS 139

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
             SL  LP +I   K LK L L G S             R  LP     I +LP S++ L
Sbjct: 140 NLSLKKLPENITQLKKLKVLNLNGSS-------------RIILP---ANI-QLPESLRIL 182

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            ++ + L+ +    EN S            ++H   NL+ L + S  +            
Sbjct: 183 -HMNDHLLTTLP--ENFS------------QLH---NLKVLNLKSSGL------------ 212

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
                     +LP+     K+LT L + +     +LP  +G L++L +L + G  +  LP
Sbjct: 213 ---------VALPNNIGQLKNLTILNLREN-YLTKLPTSIGQLKSLEKLDLQGNQLTILP 262

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--IEISNCSNLKGFPEIPFCNIDGS 381
             +GQL  L KL+L   ++L  + +SI +LK+++   +E++  ++L          +D  
Sbjct: 263 ISIGQLKSLKKLDL-GANQLTTLPTSIGQLKNLQQLFLEVNTLTSL----------LDDI 311

Query: 382 G-IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
           G ++++   VL L + ++L +LP+S+   KSL  L  +   KL RLP   G L+ LEEL 
Sbjct: 312 GKLKQL--KVLNLRR-NRLTTLPNSIGRLKSLRWLS-LSSNKLTRLPKSFGQLKKLEELN 367

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
           +EG   + +   L QL      LKK          LY++            N   LP+ I
Sbjct: 368 LEGNYFQTMLTILGQLK----SLKK----------LYLA----------SNNLTTLPENI 403

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           G L  L+ LT+    +  +PES+GQL  L++L L  N L  +PESL QL  L  L +  N
Sbjct: 404 GQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGAN 463

Query: 561 NLERIP 566
            L  +P
Sbjct: 464 PLVTLP 469



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 161/602 (26%), Positives = 268/602 (44%), Gaps = 128/602 (21%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E +  L +  +++T L  ++  L +LK+++L+Y++L T     +  QNLE L+L   +  
Sbjct: 37  EQVYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTR-NKF 95

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           T   +S+  L  LE L+L    SL  LP +I               LKNL K+   +L S
Sbjct: 96  TTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQ-------------LKNLQKL---NLTS 139

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L     ++LP +I  L  +  L +    R+  + ++I   Q  ES+RI    +    
Sbjct: 140 NLSL-----KKLPENITQLKKLKVLNLNGSSRII-LPANI---QLPESLRILHMNDHLLT 190

Query: 245 EMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +P     +   +     SS L         +LP+     K+LT L + +     +LP  
Sbjct: 191 TLPENFSQLHNLKVLNLKSSGL--------VALPNNIGQLKNLTILNLREN-YLTKLPTS 241

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI--E 360
           +G L++L +L + G  +  LP  +GQL  L KL+L   ++L  + +SI +LK+++ +  E
Sbjct: 242 IGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDL-GANQLTTLPTSIGQLKNLQQLFLE 300

Query: 361 ISNCSNLKGFPEIPFCNIDGSG-IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
           ++  ++L          +D  G ++++   VL L + ++L +LP+S+   KSL  L +  
Sbjct: 301 VNTLTSL----------LDDIGKLKQL--KVLNLRR-NRLTTLPNSIGRLKSLRWLSL-S 346

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYV 478
             KL RLP   G L+ LEEL +EG   + +   L QL +L KL L   ++  +LP  +  
Sbjct: 347 SNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLA-SNNLTTLPENIGQ 405

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL------------ 526
              L  L ++  K   RLP+ IG L+ L+ L ++   +  +PESLGQL            
Sbjct: 406 LPELQYLTLVRNK-LDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANP 464

Query: 527 -----------------------------------SSLEWLVL----------------- 534
                                              +SLE L L                 
Sbjct: 465 LVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKN 524

Query: 535 ------SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
                   N + I+PES+ +L +L +L L NN L  + + +  L S+  LDL  N L  +
Sbjct: 525 LKKLNLLYNQISIVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTL 584

Query: 589 PE 590
           P+
Sbjct: 585 PQ 586



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 27/307 (8%)

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTS 414
           +N   LK   ++   N++ + +  +P+S  KL          +K  +LP+S+   ++L  
Sbjct: 54  ANIGELKNLKKL---NLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTKLQNLEE 110

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLP 473
           L + D   L++LPD +  L+ L++L +     ++++P+++ QL   K+     SS   LP
Sbjct: 111 LNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRIILP 170

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           + + + +SL  L + D      LP+    L  LKVL +K + +  +P ++GQL +L  L 
Sbjct: 171 ANIQLPESLRILHMNDHL-LTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILN 229

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
           L +N L  +P S+ QL SL  L L  N L  +P  +  L SLK LDL  N L  +P  + 
Sbjct: 230 LRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIG 289

Query: 594 SFP------------TSIPSEFTSLRLSVDL---RNCLKLDPNELSEIIKDGWMKQSVNG 638
                          TS+  +   L+    L   RN L   PN +  +    W+  S N 
Sbjct: 290 QLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNK 349

Query: 639 ETYITKS 645
            T + KS
Sbjct: 350 LTRLPKS 356


>gi|108738506|gb|ABG00786.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 241/516 (46%), Gaps = 73/516 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESL 472
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+ L  L++ K   F   
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESXGNLSXLMVLEMLKKPLFRIS 421

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-EVPESLGQLSSLEW 531
            S +      TS E      F+ +P+    L  L+ L      I  ++P+ L +LS L  
Sbjct: 422 ESNVPG----TSEE----PRFVEVPNSFSKLLKLEALDACSWRISGKIPDDLEKLSCLMK 473

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
           L L +N    +P SL +LS+L  L L +   L+R+P
Sbjct: 474 LNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLP 509



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESXGNLSXLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L     +  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEALDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|449470346|ref|XP_004152878.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1074

 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 193/413 (46%), Gaps = 62/413 (15%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL- 59
           M K N++ +     F KM  LRLLK   +    +  + E +   ELR+  WH FPLK++ 
Sbjct: 462 MGKGNNKEKFRLEAFGKMRNLRLLKL--NYVHLIGSNFEHIISKELRWICWHGFPLKSIP 519

Query: 60  NILHWENLVSLKMPGSKVTQ--LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           +  +  NLV++ M  S +     W D Q L +LK ++L +S+ L K P+ +   NLE L 
Sbjct: 520 SSFYQGNLVAIDMRYSSLIHPWTWRDSQILENLKVLNLSHSEKLKKSPNFTKLPNLEQLK 579

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPK 176
           L  C++L+  H SI  L KL +++L  C +L+SLPTSI++ + L+  ++ GCS +  L  
Sbjct: 580 LKNCTALSSLHPSIGQLCKLHLINLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHD 639

Query: 177 MTSCHLRSTLPLLG--VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
               HL S   LL     I  +P SI  L  + +L +  C                    
Sbjct: 640 DLG-HLESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGC-------------------- 678

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE------SLPSGQCMFKSLTSL 288
                        +C   G+ S       L     PRP       +LPS      SLT L
Sbjct: 679 -------------NCR-SGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTEL 724

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYIS 347
            + +C N E LP ++G+L  L +L + G   +R L   L  L  L++L ++NC  LE+I 
Sbjct: 725 SLQNC-NLESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRLEFIQ 783

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
              F  K++ S   ++C +L   P++       S  ER P+ +L  N C+ LE
Sbjct: 784 E--FP-KNMRSFCATSCKSLVRTPDV-------SMFERAPNMILT-NCCALLE 825



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 26/250 (10%)

Query: 331 LLSKLELKNCSELEYI--SSSIFKLKSVESIEISNCSNLKGF-PEI-PFCNIDGSGIERI 386
           +L  L++ N S  E +  S +  KL ++E +++ NC+ L    P I   C +        
Sbjct: 548 ILENLKVLNLSHSEKLKKSPNFTKLPNLEQLKLKNCTALSSLHPSIGQLCKLH------- 600

Query: 387 PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
              ++ L  C+ L SLP+S+    SL +  I  C K++ L D+LG+LE+L  L  + T I
Sbjct: 601 ---LINLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLADRTAI 657

Query: 447 REVPKSLAQL-ALSKLKLKKCS------SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
             +P S+ +L  L+ L L  C+      S  SLP RL VS +L           + LP  
Sbjct: 658 SHIPFSIVKLKKLTDLSLCGCNCRSGSGSSASLPWRL-VSWALPRPN--QTCTALTLPSS 714

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLS 558
           +  L  L  L+++   +  +P  +G LS L+ L L  N NL+++   L  L  L  L + 
Sbjct: 715 LQGLSSLTELSLQNCNLESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVE 774

Query: 559 N-NNLERIPE 567
           N   LE I E
Sbjct: 775 NCGRLEFIQE 784



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 31/211 (14%)

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKK 465
           + ++L  L +   +KL++ P+    L  LE+L+++  T +  +  S+ QL  L  + L+ 
Sbjct: 548 ILENLKVLNLSHSEKLKKSPN-FTKLPNLEQLKLKNCTALSSLHPSIGQLCKLHLINLQN 606

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL-- 523
           C++  SLP+ +Y   SL +  I  C     L D++G+LE L  L    TAI  +P S+  
Sbjct: 607 CTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLADRTAISHIPFSIVK 666

Query: 524 ------------------GQLSSLEWLVLSDN--------NLQIIPESLNQLSSLVSLKL 557
                             G  +SL W ++S              +P SL  LSSL  L L
Sbjct: 667 LKKLTDLSLCGCNCRSGSGSSASLPWRLVSWALPRPNQTCTALTLPSSLQGLSSLTELSL 726

Query: 558 SNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
            N NLE +P  +  LS LK L+L  N   R+
Sbjct: 727 QNCNLESLPIDIGSLSELKKLNLGGNKNLRV 757



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 48/223 (21%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLE 289
           + PNL+ L++ +C      S   PS         + L+ C    SLP+      SL +  
Sbjct: 571 KLPNLEQLKLKNCT---ALSSLHPSIGQLCKLHLINLQNCTNLSSLPTSIYNLHSLQTFI 627

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL------------ 337
           I  C   + L D+LG+L++L  L+ D TAI  +P  + +L  L+ L L            
Sbjct: 628 ISGCSKIDCLHDDLGHLESLTTLLADRTAISHIPFSIVKLKKLTDLSLCGCNCRSGSGSS 687

Query: 338 ----------------KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
                           + C+ L  + SS+  L S+  + + NC NL+  P      ID  
Sbjct: 688 ASLPWRLVSWALPRPNQTCTALT-LPSSLQGLSSLTELSLQNC-NLESLP------IDIG 739

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
            +  +    L  NK   L  L + LC    L  L + +C +LE
Sbjct: 740 SLSELKKLNLGGNK--NLRVLGTELCGLLKLNELNVENCGRLE 780


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 178/384 (46%), Gaps = 52/384 (13%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            ++R   W+ +    L +  + E LV L M  S + +LW+  + L +LK +DL YS  L +
Sbjct: 670  KIRSLNWYGYESLCLPSTFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKE 729

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            LP+LS A NLE L L  CSSL E  SSI+ L  L++LDL+ C SL  LP   ++  L+ L
Sbjct: 730  LPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLREL 789

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L+ CS+L                       ELP SI   +N+ +L I  C  L  + SS
Sbjct: 790  KLQNCSSLI----------------------ELPLSIGTATNLKQLNISGCSSLVKLPSS 827

Query: 224  IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
            I  +  LE   +  C +L  L     N+       Q   +L ++ C + E+LP      K
Sbjct: 828  IGDITDLEVFDLSNCSSLVTLPSSIGNL-------QNLCKLIMRGCSKLEALPIN-INLK 879

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            SL +L + DC   +  P+   ++  L    + GTAI+E+P  +   + L+  ++   S  
Sbjct: 880  SLDTLNLTDCSQLKSFPEISTHISELR---LKGTAIKEVPLSIMSWSPLADFQI---SYF 933

Query: 344  EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
            E +         +  + +S     K   E+P        ++R+     L LN C+ L SL
Sbjct: 934  ESLMEFPHAFDIITKLHLS-----KDIQEVP------PWVKRMSRLRDLSLNNCNNLVSL 982

Query: 403  PSSLCMFKSLTSLEIIDCKKLERL 426
            P    +  SL  +   +CK LERL
Sbjct: 983  PQ---LSDSLDYIYADNCKSLERL 1003



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 184/411 (44%), Gaps = 97/411 (23%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
            ++ELP  L     L +L+L+NCS L  + SSI KL S++ +++ NCS+L+  P I     
Sbjct: 727  LKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIE---- 781

Query: 379  DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
            + + +       LKL  CS L  LP S+    +L  L I  C  L +LP  +G++  LE 
Sbjct: 782  NATKLRE-----LKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEV 836

Query: 439  LRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
              +   + +  +P S+  L  L KL ++ CS  E+LP  + + KSL +L + DC      
Sbjct: 837  FDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININL-KSLDTLNLTDCSQLKSF 895

Query: 497  PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-------------------- 536
            P EI    ++  L +KGTAI+EVP     LS + W  L+D                    
Sbjct: 896  P-EIST--HISELRLKGTAIKEVP-----LSIMSWSPLADFQISYFESLMEFPHAFDIIT 947

Query: 537  -----NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDLFE 582
                  ++Q +P  + ++S L  L L+N NNL  +P+  D L         SL+ LD   
Sbjct: 948  KLHLSKDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCF 1007

Query: 583  NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            NN    PE    FP                  C KL+        +D  M   ++     
Sbjct: 1008 NN----PEIRLYFP-----------------KCFKLNQEA-----RDLIMHTCIDA---- 1037

Query: 643  TKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFAFCVVVA 689
                 FPG ++P  F H++T G ++ +K   +P PT     + F  C+++ 
Sbjct: 1038 ----MFPGTQVPACFIHRATSGDSLKIKLKESPLPTT----LRFKACIMLV 1080



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 137/271 (50%), Gaps = 46/271 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TA 318
           ELKL+ C     LPS     + LTSL+I+D   C + E+LP  + N   L  L +   ++
Sbjct: 741 ELKLRNCSSLVELPSS---IEKLTSLQILDLENCSSLEKLP-AIENATKLRELKLQNCSS 796

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           + ELP  +G    L +L +  CS L  + SSI  +  +E  ++SNCS+L   P       
Sbjct: 797 LIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLP------- 849

Query: 379 DGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
             S I  + +   L +  CSKLE+LP ++ + KSL +L + DC +L+  P+   ++    
Sbjct: 850 --SSIGNLQNLCKLIMRGCSKLEALPININL-KSLDTLNLTDCSQLKSFPEISTHIS--- 903

Query: 438 ELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP---------SRLYVSKS------- 481
           ELR++GT I+EVP S+  ++ S L   + S FESL          ++L++SK        
Sbjct: 904 ELRLKGTAIKEVPLSI--MSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPW 961

Query: 482 ------LTSLEIIDCKNFMRLPDEIGNLEYL 506
                 L  L + +C N + LP    +L+Y+
Sbjct: 962 VKRMSRLRDLSLNNCNNLVSLPQLSDSLDYI 992


>gi|108738462|gb|ABG00764.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 243/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 -----QFLEMPSCN---IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   E+ S     I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSIXELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 199/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P  +   L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPD-SIXELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIXELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|10177430|dbj|BAB10522.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1055

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 152/303 (50%), Gaps = 20/303 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           MSKI  E  I    F  M  L+ LKF    N  ++  ++ +P   LR   W  +P K L 
Sbjct: 500 MSKIG-EFSIRKRVFEGMHNLKFLKFYNG-NVSLLEDMKYLP--RLRLLHWDSYPRKRLP 555

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L +  SK+ +LW  +Q L +LK+I+L+YS  L ++P+LS A NLE L L 
Sbjct: 556 LTFQPECLVELYLVSSKLEKLWGGIQPLTNLKKINLEYSSNLKEIPNLSKATNLETLRLT 615

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI  L+KLEVLD   C  L  +PT I+   LK + +  CS L++ P +++
Sbjct: 616 GCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKINLSSLKMVGMDDCSRLRSFPDIST 675

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLES----- 232
                 L + G  I+E P+SI  +  +G LLI   S KRL ++  S+  L    S     
Sbjct: 676 N--IKILSIRGTKIKEFPASI--VGGLGILLIGSRSLKRLTHVPESVSYLDLSHSDIKMI 731

Query: 233 -IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF-KSLTSLEI 290
              +   P+LQ L + +C      S E  S  L+     R  SL S  C F + +  LE 
Sbjct: 732 PDYVIGLPHLQHLTIGNCR--KLVSIEGHSPSLESIVAYRCISLESMCCSFHRPILKLEF 789

Query: 291 IDC 293
            +C
Sbjct: 790 YNC 792



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 38/311 (12%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           SKLE L   +    +L  + +     L+ +P+ L     LE LR+ G   + E+P S++ 
Sbjct: 571 SKLEKLWGGIQPLTNLKKINLEYSSNLKEIPN-LSKATNLETLRLTGCESLMEIPSSISN 629

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L    CS    +P+++ +S SL  + + DC      PD   N+   K+L+I+GT
Sbjct: 630 LHKLEVLDASGCSKLHVIPTKINLS-SLKMVGMDDCSRLRSFPDISTNI---KILSIRGT 685

Query: 515 AIREVPESL-GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            I+E P S+ G L  L     S   L  +PES++ L       LS+++++ IP+ +  L 
Sbjct: 686 KIKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYLD------LSHSDIKMIPDYVIGLP 739

Query: 574 SLKYLDL-----------FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
            L++L +              +L+ I  Y      S+   F    L ++  NCLKLD   
Sbjct: 740 HLQHLTIGNCRKLVSIEGHSPSLESIVAYRCISLESMCCSFHRPILKLEFYNCLKLDNES 799

Query: 623 LSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--TISLKTPQPTGYNKLM 680
              II         +G   I    +  GNE+P  F HQ+ G+  TISL       ++   
Sbjct: 800 KRRIILH-------SGHRII----FLTGNEVPAQFTHQTRGNSITISLSPGGEESFSVSS 848

Query: 681 GFAFCVVVACS 691
            F  C+V++ S
Sbjct: 849 RFRACLVLSPS 859


>gi|227438127|gb|ACP30553.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1290

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 167/361 (46%), Gaps = 50/361 (13%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LR   W  +P K L +    E LV L+M  S + +LW+    L  LK++ + +S  L +
Sbjct: 577 KLRLLRWDGYPSKCLPSNFKAEYLVELRMKNSSLEKLWEGTLPLGRLKKLIMSWSTYLKE 636

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LPDLS A++LE + L  C+SL    SSIQ L+KL  LDL+ C  L S PT I+ K L+ L
Sbjct: 637 LPDLSNAKSLEEVYLDRCTSLVTFPSSIQNLHKLRELDLEGCTELESFPTLINLKSLEYL 696

Query: 164 VLRGCSNLKNLPKM------------TSCHLRST---LPLLGVGIEELPSSIKCLSNIGE 208
            LR CS L+N P++              C   +    L  LG  +  +P   +    IG 
Sbjct: 697 NLRECSRLRNFPQIYINSSQGFSLEVEGCFWNNNLCGLDYLGCIMRCIPCKFRPEQLIG- 755

Query: 209 LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS-SELKLK 267
            L      LE +   +  L  LE + +  C NL   E+P  ++        P+   L+L 
Sbjct: 756 -LTVKSNMLERLWEGVQCLGSLEMMDVSSCENLT--EIPDLSM-------APNLMYLRLN 805

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG----------- 316
            C    ++PS       L  LE+ +C   E LP ++ NL +L  L + G           
Sbjct: 806 NCKSLVTVPSTIGSLCKLVGLEMKECTMLEVLPTDV-NLSSLRTLYLSGCSRLRSFPQIS 864

Query: 317 ----------TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
                     TAI E+P  +     LS+L +  C  L+ IS + F+L+S+  ++ S+C  
Sbjct: 865 RSIASLYLNDTAIEEVPCCIENFWRLSELSMSGCKRLKNISPNFFRLRSLHLVDFSDCGE 924

Query: 367 L 367
           +
Sbjct: 925 V 925



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 205/484 (42%), Gaps = 73/484 (15%)

Query: 252  DGTRSKEQPSS-------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            DG  SK  PS+       EL++K     E L  G      L  L +      + LPD L 
Sbjct: 584  DGYPSKCLPSNFKAEYLVELRMKNSSL-EKLWEGTLPLGRLKKLIMSWSTYLKELPD-LS 641

Query: 305  NLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
            N ++L  + +D  T++   P  +  L  L +L+L+ C+ELE   + I  LKS+E + +  
Sbjct: 642  NAKSLEEVYLDRCTSLVTFPSSIQNLHKLRELDLEGCTELESFPTLI-NLKSLEYLNLRE 700

Query: 364  CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL----CMFK--SLTSLEI 417
            CS L+ FP+I   +  G  +E +       N C  L+ L   +    C F+   L  L  
Sbjct: 701  CSRLRNFPQIYINSSQGFSLE-VEGCFWNNNLCG-LDYLGCIMRCIPCKFRPEQLIGL-T 757

Query: 418  IDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
            +    LERL + +  L +LE + V     + E+P       L  L+L  C S  ++PS +
Sbjct: 758  VKSNMLERLWEGVQCLGSLEMMDVSSCENLTEIPDLSMAPNLMYLRLNNCKSLVTVPSTI 817

Query: 477  YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS 535
                 L  LE+ +C     LP ++ NL  L+ L + G + +R  P+    ++SL    L+
Sbjct: 818  GSLCKLVGLEMKECTMLEVLPTDV-NLSSLRTLYLSGCSRLRSFPQISRSIASL---YLN 873

Query: 536  DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD--------------- 579
            D  ++ +P  +     L  L +S    L+ I      L SL  +D               
Sbjct: 874  DTAIEEVPCCIENFWRLSELSMSGCKRLKNISPNFFRLRSLHLVDFSDCGEVITVLSDAS 933

Query: 580  ---------------LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
                           LFEN  +R  +        +   F  L    +  NC KLD  +  
Sbjct: 934  IKAKMSIEDHFSLIPLFENTEERYKDGADIDWAGVSRNFEFL----NFNNCFKLD-RDAR 988

Query: 625  EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
            E+I   +MK +V            PG E+P +F H+++G+++++  PQ +     +GF  
Sbjct: 989  ELIIRSYMKPTV-----------LPGGEVPTYFTHRASGNSLAVTLPQSSLSQDFLGFKA 1037

Query: 685  CVVV 688
            C+ V
Sbjct: 1038 CIAV 1041


>gi|108738434|gb|ABG00750.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738436|gb|ABG00751.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738438|gb|ABG00752.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738446|gb|ABG00756.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738452|gb|ABG00759.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738460|gb|ABG00763.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738492|gb|ABG00779.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738494|gb|ABG00780.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738528|gb|ABG00797.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 199/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 178/384 (46%), Gaps = 52/384 (13%)

Query: 45   ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            ++R   W+ +    L +  + E LV L M  S + +LW+  + L +LK +DL YS  L +
Sbjct: 670  KIRSLNWYGYESLCLPSTFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKE 729

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
            LP+LS A NLE L L  CSSL E  SSI+ L  L++LDL+ C SL  LP   ++  L+ L
Sbjct: 730  LPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLREL 789

Query: 164  VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
             L+ CS+L                       ELP SI   +N+ +L I  C  L  + SS
Sbjct: 790  KLQNCSSLI----------------------ELPLSIGTATNLKQLNISGCSSLVKLPSS 827

Query: 224  IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
            I  +  LE   +  C +L  L     N+       Q   +L ++ C + E+LP      K
Sbjct: 828  IGDITDLEVFDLSNCSSLVTLPSSIGNL-------QNLCKLIMRGCSKLEALPIN-INLK 879

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            SL +L + DC   +  P+   ++  L    + GTAI+E+P  +   + L+  ++   S  
Sbjct: 880  SLDTLNLTDCSQLKSFPEISTHISELR---LKGTAIKEVPLSIMSWSPLADFQI---SYF 933

Query: 344  EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
            E +         +  + +S     K   E+P        ++R+     L LN C+ L SL
Sbjct: 934  ESLMEFPHAFDIITKLHLS-----KDIQEVP------PWVKRMSRLRDLSLNNCNNLVSL 982

Query: 403  PSSLCMFKSLTSLEIIDCKKLERL 426
            P    +  SL  +   +CK LERL
Sbjct: 983  PQ---LSDSLDYIYADNCKSLERL 1003



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 184/411 (44%), Gaps = 97/411 (23%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
            ++ELP  L     L +L+L+NCS L  + SSI KL S++ +++ NCS+L+  P I     
Sbjct: 727  LKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIE---- 781

Query: 379  DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
            + + +       LKL  CS L  LP S+    +L  L I  C  L +LP  +G++  LE 
Sbjct: 782  NATKLRE-----LKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEV 836

Query: 439  LRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
              +   + +  +P S+  L  L KL ++ CS  E+LP  + + KSL +L + DC      
Sbjct: 837  FDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININL-KSLDTLNLTDCSQLKSF 895

Query: 497  PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-------------------- 536
            P EI    ++  L +KGTAI+EVP     LS + W  L+D                    
Sbjct: 896  P-EIST--HISELRLKGTAIKEVP-----LSIMSWSPLADFQISYFESLMEFPHAFDIIT 947

Query: 537  -----NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDLFE 582
                  ++Q +P  + ++S L  L L+N NNL  +P+  D L         SL+ LD   
Sbjct: 948  KLHLSKDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCF 1007

Query: 583  NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            NN    PE    FP                  C KL+        +D  M   ++     
Sbjct: 1008 NN----PEIRLYFP-----------------KCFKLNQEA-----RDLIMHTCIDA---- 1037

Query: 643  TKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFAFCVVVA 689
                 FPG ++P  F H++T G ++ +K   +P PT     + F  C+++ 
Sbjct: 1038 ----MFPGTQVPACFIHRATSGDSLKIKLKESPLPTT----LRFKACIMLV 1080



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 137/271 (50%), Gaps = 46/271 (16%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TA 318
           ELKL+ C     LPS     + LTSL+I+D   C + E+LP  + N   L  L +   ++
Sbjct: 741 ELKLRNCSSLVELPSS---IEKLTSLQILDLENCSSLEKLP-AIENATKLRELKLQNCSS 796

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           + ELP  +G    L +L +  CS L  + SSI  +  +E  ++SNCS+L   P       
Sbjct: 797 LIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLP------- 849

Query: 379 DGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
             S I  + +   L +  CSKLE+LP ++ + KSL +L + DC +L+  P+   ++    
Sbjct: 850 --SSIGNLQNLCKLIMRGCSKLEALPININL-KSLDTLNLTDCSQLKSFPEISTHIS--- 903

Query: 438 ELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP---------SRLYVSKS------- 481
           ELR++GT I+EVP S+  ++ S L   + S FESL          ++L++SK        
Sbjct: 904 ELRLKGTAIKEVPLSI--MSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPW 961

Query: 482 ------LTSLEIIDCKNFMRLPDEIGNLEYL 506
                 L  L + +C N + LP    +L+Y+
Sbjct: 962 VKRMSRLRDLSLNNCNNLVSLPQLSDSLDYI 992


>gi|108738549|gb|ABG00807.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 199/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCXKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|108738558|gb|ABG00811.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKXPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L   P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKXPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 184/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  + PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKXPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L + P+
Sbjct: 216 LKNLQDLHLVRCTSLSKXPD 235


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 175/383 (45%), Gaps = 46/383 (12%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           SK + E  +N   FS MT L++L+     N  +   LE +   +LR   WH +P + L +
Sbjct: 560 SKEHGESHLNAKFFSAMTGLKVLRV---HNVFLSGVLEYLS-NKLRLLSWHGYPFRNLPS 615

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                 L+ L +  S +  +W + + L  LK I+L  SK L K PDLS   NLE L L  
Sbjct: 616 DFKPSELLELNLQNSCIENIWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNG 675

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-S 179
           C+ L E H S+  L  L  LDL  CKSL S+ ++I  + LK L+L GCS L+N P++  +
Sbjct: 676 CTRLQELHQSVGTLKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGN 735

Query: 180 CHLRSTLPLLGVGIEE------------------------LPSSIKCLSNIGELLIYSCK 215
             L   L L G  I +                        LP++I CL++I  L +  C 
Sbjct: 736 MKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCS 795

Query: 216 RLENISSSIFKLQFLESIRI------HRCPNLQFLE-MPSCNIDGTRSKEQPSSELKLKK 268
           +L+ I  S+  +  L+ + +      H    L+ L+ +   N +G  S++   S   L  
Sbjct: 796 KLDKIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEGL-SRKLCYSLFLLWS 854

Query: 269 CPRPESLPS-GQCMFKSLTSLEIIDCPNFE-------RLPDELGNLQALNRLIIDGTAIR 320
            PR  +  S G  +   LT+   +   NF         +PD+L  L +L+ L +      
Sbjct: 855 TPRNNNSHSFGLWLITCLTNFSSVKVLNFSDCKLVDGDIPDDLSCLSSLHFLDLSRNLFT 914

Query: 321 ELPEGLGQLALLSKLELKNCSEL 343
            LP  L QL  L  L L NCS L
Sbjct: 915 NLPHSLSQLINLRCLVLDNCSRL 937



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 173/389 (44%), Gaps = 74/389 (19%)

Query: 281 MFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            F ++T L+++   N     + + L N   L  L   G   R LP       LL +L L+
Sbjct: 572 FFSAMTGLKVLRVHNVFLSGVLEYLSN--KLRLLSWHGYPFRNLPSDFKPSELL-ELNLQ 628

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK 398
           N S +E I     KL  ++ I +SN   L   P++         +ER     L LN C++
Sbjct: 629 N-SCIENIWRETEKLDKLKVINLSNSKFLLKTPDLSTV----PNLER-----LVLNGCTR 678

Query: 399 LESLPSSLCMFKSLTSLEIIDCK-----------------------KLERLPDELGNLEA 435
           L+ L  S+   K L  L++ DCK                       +LE  P+ +GN++ 
Sbjct: 679 LQELHQSVGTLKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKL 738

Query: 436 LEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           ++EL ++GT IR++  S+ +L +L  L L+ C +  +LP+ +    S+  L +  C    
Sbjct: 739 VKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCSKLD 798

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE------------------WLVLSD 536
           ++PD +GN+  LK L + GT+I  +P +L  L +LE                  W    +
Sbjct: 799 KIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEGLSRKLCYSLFLLWSTPRN 858

Query: 537 NN-----LQIIPESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIP 589
           NN     L +I   L   SS+  L  S+  L    IP+ L  LSSL +LDL  N    +P
Sbjct: 859 NNSHSFGLWLIT-CLTNFSSVKVLNFSDCKLVDGDIPDDLSCLSSLHFLDLSRNLFTNLP 917

Query: 590 EYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
             L        S+  +LR  V L NC +L
Sbjct: 918 HSL--------SQLINLRCLV-LDNCSRL 937



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 137/313 (43%), Gaps = 64/313 (20%)

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCP 270
           N+S+S F    L++  +   PNL+ L +  C    TR +E   S         L LK C 
Sbjct: 649 NLSNSKF---LLKTPDLSTVPNLERLVLNGC----TRLQELHQSVGTLKHLIFLDLKDCK 701

Query: 271 RPESLPSGQCMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
             +S+    C   SL SL+I+    C   E  P+ +GN++ +  L +DGTAIR+L   +G
Sbjct: 702 SLKSI----CSNISLESLKILILSGCSRLENFPEIVGNMKLVKELHLDGTAIRKLHVSIG 757

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDG 380
           +L  L  L+L+ C  L  + ++I  L S+E + +  CS L   P+       +   ++ G
Sbjct: 758 KLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCSKLDKIPDSLGNISCLKKLDVSG 817

Query: 381 SGIERIPSSVLKLNKCSKL--ESLPSSLCM---------------------------FKS 411
           + I  IP ++  L     L  E L   LC                            F S
Sbjct: 818 TSISHIPFTLRLLKNLEVLNCEGLSRKLCYSLFLLWSTPRNNNSHSFGLWLITCLTNFSS 877

Query: 412 LTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
           +  L   DCK ++  +PD+L  L +L  L +       +P SL+QL  L  L L  CS  
Sbjct: 878 VKVLNFSDCKLVDGDIPDDLSCLSSLHFLDLSRNLFTNLPHSLSQLINLRCLVLDNCSRL 937

Query: 470 ESLP----SRLYV 478
            SLP    S LYV
Sbjct: 938 RSLPKFPVSLLYV 950


>gi|17381122|gb|AAL36373.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 876

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 154/303 (50%), Gaps = 20/303 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           MSKI  E  I    F  M  L+ LKF    N  ++  ++ +P   LR   W  +P K L 
Sbjct: 321 MSKI-GEFSIRKRVFEGMHNLKFLKFYNG-NVSLLEDMKYLP--RLRLLHWDSYPRKRLP 376

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L +  SK+ +LW  +Q L +LK+I+L+YS  L ++P+LS A NLE L L 
Sbjct: 377 LTFQPECLVELYLVSSKLEKLWGGIQPLTNLKKINLEYSSNLKEIPNLSKATNLETLRLT 436

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI  L+KLEVLD   C  L  +PT I+   LK + +  CS L++ P +++
Sbjct: 437 GCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKINLSSLKMVGMDDCSRLRSFPDIST 496

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLES-IR-- 234
                 L + G  I+E P+SI  +  +G LLI   S KRL ++  S+  L    S I+  
Sbjct: 497 N--IKILSIRGTKIKEFPASI--VGGLGILLIGSRSLKRLTHVPESVSYLDLSHSDIKMI 552

Query: 235 ---IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF-KSLTSLEI 290
              +   P+LQ L + +C      S E  S  L+     R  SL S  C F + +  LE 
Sbjct: 553 PDYVIGLPHLQHLTIGNCR--KLVSIEGHSPSLESIVAYRCISLESMCCSFHRPILKLEF 610

Query: 291 IDC 293
            +C
Sbjct: 611 YNC 613



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 38/311 (12%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           SKLE L   +    +L  + +     L+ +P+ L     LE LR+ G   + E+P S++ 
Sbjct: 392 SKLEKLWGGIQPLTNLKKINLEYSSNLKEIPN-LSKATNLETLRLTGCESLMEIPSSISN 450

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L    CS    +P+++ +S SL  + + DC      PD   N+   K+L+I+GT
Sbjct: 451 LHKLEVLDASGCSKLHVIPTKINLS-SLKMVGMDDCSRLRSFPDISTNI---KILSIRGT 506

Query: 515 AIREVPESL-GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            I+E P S+ G L  L     S   L  +PES++ L       LS+++++ IP+ +  L 
Sbjct: 507 KIKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYLD------LSHSDIKMIPDYVIGLP 560

Query: 574 SLKYLDL-----------FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
            L++L +              +L+ I  Y      S+   F    L ++  NCLKLD   
Sbjct: 561 HLQHLTIGNCRKLVSIEGHSPSLESIVAYRCISLESMCCSFHRPILKLEFYNCLKLDNES 620

Query: 623 LSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--TISLKTPQPTGYNKLM 680
              II         +G   I    +  GNE+P  F HQ+ G+  TISL       ++   
Sbjct: 621 KRRIILH-------SGHRII----FLTGNEVPAQFTHQTRGNSITISLSPGGEESFSVSS 669

Query: 681 GFAFCVVVACS 691
            F  C+V++ S
Sbjct: 670 RFRACLVLSPS 680


>gi|108738564|gb|ABG00814.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 232/541 (42%), Gaps = 125/541 (23%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK +  +    L  +PDLS  + LE L    C+ L +   S+  L KL  LDL RC  L
Sbjct: 54  NLKVVIFRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDLRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +     +   K L++L L GCS+L  LP+                      +I  ++++ 
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPE----------------------NIGAMTSLK 151

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ---PSSEL 264
           ELL+     ++N+  SI +LQ LE + +  C   +  E+P C I   +S E+     + L
Sbjct: 152 ELLLDGTA-IKNLPESINRLQNLEILSLRGC---KIQELPLC-IGTLKSLEKLYLDDTAL 206

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           K        +LPS     K+L  L ++ C +  ++PD +  L++L +L I+G+A+ ELP 
Sbjct: 207 K--------NLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPL 258

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFK-----------------------LKSVESIEI 361
               L  L      +C  L+ + SSI +                       L  +  +E+
Sbjct: 259 KPSSLPSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELEL 318

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            NC  LK  P+       +   N++GS IE +P    KL K                L  
Sbjct: 319 RNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEK----------------LVE 362

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                 
Sbjct: 363 LRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS----------------- 405

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLE 530
                 +L  LE++  K   R+ +            + GT+      EVP S  +L  LE
Sbjct: 406 ------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLE 448

Query: 531 WLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI 588
            L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R+
Sbjct: 449 ELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRL 508

Query: 589 P 589
           P
Sbjct: 509 P 509



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVIFRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           +L+ CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DLRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 197/459 (42%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     C  L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D         S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYILNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 7/191 (3%)

Query: 406 LCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSK 460
           LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS+  L  L  
Sbjct: 46  LCFFQVDENLKVVIFRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIH 104

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           L L++CS        +   K L  L +  C +   LP+ IG +  LK L + GTAI+ +P
Sbjct: 105 LDLRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLP 164

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           ES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  L +L+ L L
Sbjct: 165 ESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHL 224

Query: 581 FE-NNLDRIPE 590
               +L +IP+
Sbjct: 225 VRCTSLSKIPD 235


>gi|108738442|gb|ABG00754.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 241/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHXLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 184/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C   E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHXLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHXLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|108738450|gb|ABG00758.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738472|gb|ABG00769.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738510|gb|ABG00788.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738522|gb|ABG00794.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 199/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|357513781|ref|XP_003627179.1| NBS resistance protein [Medicago truncatula]
 gi|355521201|gb|AET01655.1| NBS resistance protein [Medicago truncatula]
          Length = 1236

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 178/370 (48%), Gaps = 43/370 (11%)

Query: 6   SEIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
           + I + P +F KM  LRLL F    G K+  + H L+ +P   LRYF+W  +PL++L + 
Sbjct: 591 THINLRPESFEKMVNLRLLAFQDNKGIKSINLPHGLDLLP-ENLRYFQWDGYPLQSLPST 649

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              E LV L + GS V +LW+ V +L +L+ +DL  SK L + P++S + NL+ + L YC
Sbjct: 650 FCPEMLVELSLKGSHVEKLWNGVLDLPNLEILDLGGSKKLIECPNVSGSPNLKHVILRYC 709

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            S+ E  SSI  L KLEVL++  C SL SL ++  S  L++L  R C NLK      S  
Sbjct: 710 ESMPEVDSSIFLLQKLEVLNVFECTSLKSLSSNTCSPALRKLEARDCINLKEFSVTFSSV 769

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL--QFLESIRIHRCP 239
               L L      ELPSSI    N+   +         IS  +  L   F + I +    
Sbjct: 770 DGLDLCLSEWDRNELPSSILHKQNLKRFVF-------PISDCLVDLPENFADHISLSSPQ 822

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           N +  + P   +D            KL   P           F+S+  L  I  P     
Sbjct: 823 NRE--DDPFITLD------------KLFSSP----------AFQSVKELTFIYIPILSEF 858

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS-SIFKLKSVES 358
           PD +  L +L  L +DG  IR LPE +  L  L ++++ +C  ++ I + S F    +  
Sbjct: 859 PDSISLLSSLKSLTLDGMDIRSLPETIKYLPRLERVDVYDCKMIQSIPALSQF----IPV 914

Query: 359 IEISNCSNLK 368
           + +SNC +L+
Sbjct: 915 LVVSNCESLE 924



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 191/462 (41%), Gaps = 80/462 (17%)

Query: 271  RPESLPSGQCM----FKSLTSLEIIDCPN-FERLPDELGNLQALNRLIIDGTAIRELPEG 325
            RPES      +    F+    ++ I+ P+  + LP+ L   Q       DG  ++ LP  
Sbjct: 596  RPESFEKMVNLRLLAFQDNKGIKSINLPHGLDLLPENLRYFQW------DGYPLQSLPST 649

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN------CSNLKGFPEIP----- 374
                 +L +L LK  S +E + + +  L ++E +++        C N+ G P +      
Sbjct: 650  FCP-EMLVELSLKG-SHVEKLWNGVLDLPNLEILDLGGSKKLIECPNVSGSPNLKHVILR 707

Query: 375  FCN----IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            +C     +D S        VL + +C+ L+SL S+ C   +L  LE  DC  L+      
Sbjct: 708  YCESMPEVDSSIFLLQKLEVLNVFECTSLKSLSSNTCS-PALRKLEARDCINLKEFSVTF 766

Query: 431  GNLEALEELRVEGTGIREVPKS-LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
             +++ L+ L +      E+P S L +  L +           LP       SL+S +   
Sbjct: 767  SSVDGLD-LCLSEWDRNELPSSILHKQNLKRFVFPISDCLVDLPENFADHISLSSPQ--- 822

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
                        N E    +T+         +S+ +L+ +   +LS+      P+S++ L
Sbjct: 823  ------------NREDDPFITLDKLFSSPAFQSVKELTFIYIPILSE-----FPDSISLL 865

Query: 550  SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLR- 607
            SSL SL L   ++  +PE +  L  L+ +D+++   +  IP   +  P  + S   SL  
Sbjct: 866  SSLKSLTLDGMDIRSLPETIKYLPRLERVDVYDCKMIQSIPALSQFIPVLVVSNCESLEK 925

Query: 608  -LS-------------VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM--YF--- 648
             LS             + L NC  L+P+    ++KD   +       Y    +  YF   
Sbjct: 926  VLSSTIEPYEEPNPCFIYLLNCKNLEPHSYQTVLKDAMDRIETGPSLYDDDEIIWYFLPA 985

Query: 649  -PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
             PG E   WF + ST   ++L+ P     + L GF++ +V++
Sbjct: 986  MPGME--NWFHYSSTQVCVTLELP-----SNLQGFSYYLVLS 1020


>gi|357513659|ref|XP_003627118.1| Disease resistance protein [Medicago truncatula]
 gi|355521140|gb|AET01594.1| Disease resistance protein [Medicago truncatula]
          Length = 913

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 183/403 (45%), Gaps = 74/403 (18%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           ++ +   TF  MT+LR L+                      Y EW ++PLK+L +    E
Sbjct: 487 DLHVGADTFKMMTKLRFLRL---------------------YLEWSEYPLKSLPHPFCAE 525

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV + +P S +  LW  +Q LV L+++DL+ SK L KLPDLS A+ L+ L L  C SL 
Sbjct: 526 LLVEIHLPRSNIKYLWHGMQKLVHLEKVDLRESKQLMKLPDLSGAEKLKWLYLSGCESLH 585

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST 185
           E   S+   + L  L LD CK L  L +  H   L+++ + GCS+L+      S      
Sbjct: 586 EVQPSVFSKDTLVTLLLDGCKKLEILVSENHLTSLQKIDVSGCSSLREFS--LSSDSIEE 643

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
           L L   GIE L SSI  +S +  L +    RL+N+   +  ++ L  I           +
Sbjct: 644 LDLSNTGIEILHSSIGRMSMLWRLDLQGL-RLKNLPKEMSSMRSLTEI-----------D 691

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
           + +CN+  T+SK               E+L  G    +SL  L + DC N   LP  + +
Sbjct: 692 LSNCNV-VTKSK--------------LEALFGG---LESLIILYLKDCGNLLELPVNIDS 733

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC- 364
           L  L  L +DG+ ++ LP     L+ L  L L NC +L  +S        +E + ++NC 
Sbjct: 734 LSLLYELRLDGSNVKMLPTSFKNLSRLRILYLDNCKKLGCLSEVP---PHIEELHVNNCI 790

Query: 365 ------------SNLKGF-PEIPFCN---IDGSGIERIPSSVL 391
                        ++KG+  EI F N   +D   + RI   V+
Sbjct: 791 SLVKVSSLKALSHSMKGWKKEISFKNTIKLDAPSLNRITEDVI 833



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 173/389 (44%), Gaps = 63/389 (16%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S ++Y+   + KL  +E +++     L   P++       SG E++    L L+ C  L 
Sbjct: 535 SNIKYLWHGMQKLVHLEKVDLRESKQLMKLPDL-------SGAEKL--KWLYLSGCESLH 585

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDE--LGNLE------------------ALEELR 440
            +  S+    +L +L +  CKKLE L  E  L +L+                  ++EEL 
Sbjct: 586 EVQPSVFSKDTLVTLLLDGCKKLEILVSENHLTSLQKIDVSGCSSLREFSLSSDSIEELD 645

Query: 441 VEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR--LP 497
           +  TGI  +  S+ +++ L +L L+     ++LP  +   +SLT +++ +C    +  L 
Sbjct: 646 LSNTGIEILHSSIGRMSMLWRLDLQGLR-LKNLPKEMSSMRSLTEIDLSNCNVVTKSKLE 704

Query: 498 DEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
              G LE L +L +K    + E+P ++  LS L  L L  +N++++P S   LS L  L 
Sbjct: 705 ALFGGLESLIILYLKDCGNLLELPVNIDSLSLLYELRLDGSNVKMLPTSFKNLSRLRILY 764

Query: 557 LSN----NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVD 611
           L N      L  +P  ++ L     + L + ++L  +   ++ +   I            
Sbjct: 765 LDNCKKLGCLSEVPPHIEELHVNNCISLVKVSSLKALSHSMKGWKKEIS----------- 813

Query: 612 LRNCLKLDPNELSEIIKDGWMKQ------------SVNGETYITKSMYFPGNEIPKWFRH 659
            +N +KLD   L+ I +D  +               V+G +Y     + PG  +P  F+ 
Sbjct: 814 FKNTIKLDAPSLNRITEDVILTMKSAAFHNTIIVYDVHGWSYNGVHFWLPGCTVPSQFKF 873

Query: 660 QSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
           ++ GS+ S+    P   +K +GF + VVV
Sbjct: 874 RAIGSSSSITIKIPP-LSKDVGFIYSVVV 901



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 57/260 (21%)

Query: 262 SELKLKKCPRPE--------SLPSGQCMF-----KSLTSLEIID---CPNFERLPDELGN 305
           SE  LK  P P          LP     +     + L  LE +D        +LPD L  
Sbjct: 511 SEYPLKSLPHPFCAELLVEIHLPRSNIKYLWHGMQKLVHLEKVDLRESKQLMKLPD-LSG 569

Query: 306 LQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            + L  L + G  ++ E+   +     L  L L  C +LE + S    L S++ I++S C
Sbjct: 570 AEKLKWLYLSGCESLHEVQPSVFSKDTLVTLLLDGCKKLEILVSE-NHLTSLQKIDVSGC 628

Query: 365 SNLKGFP----EIPFCNIDGSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKSLT 413
           S+L+ F      I   ++  +GIE + SS+ +++       +  +L++LP  +   +SLT
Sbjct: 629 SSLREFSLSSDSIEELDLSNTGIEILHSSIGRMSMLWRLDLQGLRLKNLPKEMSSMRSLT 688

Query: 414 SLEII--------------------------DCKKLERLPDELGNLEALEELRVEGTGIR 447
            +++                           DC  L  LP  + +L  L ELR++G+ ++
Sbjct: 689 EIDLSNCNVVTKSKLEALFGGLESLIILYLKDCGNLLELPVNIDSLSLLYELRLDGSNVK 748

Query: 448 EVPKSLAQLA-LSKLKLKKC 466
            +P S   L+ L  L L  C
Sbjct: 749 MLPTSFKNLSRLRILYLDNC 768


>gi|108738554|gb|ABG00809.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-VKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 200/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L +I+C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLINCAKVVDIP 553



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTA++ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|108738430|gb|ABG00748.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738470|gb|ABG00768.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738480|gb|ABG00773.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738482|gb|ABG00774.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738500|gb|ABG00783.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738508|gb|ABG00787.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738516|gb|ABG00791.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738518|gb|ABG00792.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738532|gb|ABG00799.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738535|gb|ABG00800.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 232/541 (42%), Gaps = 125/541 (23%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L
Sbjct: 54  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +     +   K L++L L GCS+L  LP+                      +I  ++++ 
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPE----------------------NIGAMTSLK 151

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ---PSSEL 264
           ELL+     ++N+  SI +LQ LE + +  C   +  E+P C I   +S E+     + L
Sbjct: 152 ELLLDGTA-IKNLPESINRLQNLEILSLRGC---KIQELPLC-IGTLKSLEKLYLDDTAL 206

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           K        +LPS     K+L  L ++ C +  ++PD +  L++L +L I+G+A+ ELP 
Sbjct: 207 K--------NLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPL 258

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFK-----------------------LKSVESIEI 361
               L  L      +C  L+++ SSI +                       L  +  +E+
Sbjct: 259 KPSSLPSLYDFSAGDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELEL 318

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            NC  LK  P+       +   N++GS IE +P    KL K                L  
Sbjct: 319 RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK----------------LVE 362

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                 
Sbjct: 363 LRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS----------------- 405

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLE 530
                 +L  LE++  K   R+ +            + GT+      EVP S  +L  LE
Sbjct: 406 ------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLE 448

Query: 531 WLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI 588
            L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R+
Sbjct: 449 ELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRL 508

Query: 589 P 589
           P
Sbjct: 509 P 509



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 199/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P  +   L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPD-SIYELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+++ SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|104647648|gb|ABF74392.1| disease resistance protein [Arabidopsis lyrata]
          Length = 483

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 200/438 (45%), Gaps = 61/438 (13%)

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-----EMPSC 249
           ++P S+  L  + +L +  C  L      +  L+ LE + +  C NL  L      MP  
Sbjct: 14  KVPRSVGNLRKLLQLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCL 73

Query: 250 N---IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +DGT     P S  +L+K                L  L ++ C + + LP  +G L
Sbjct: 74  KELLLDGTAISNLPDSIFRLQK----------------LEKLSLMGCRSIQELPTCIGKL 117

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
            +L  L +D TA+R LP  +G L  L KL L  C+ L  I  SI +L S++ + I+  S 
Sbjct: 118 TSLEDLYLDDTALRNLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKLFITG-SA 176

Query: 367 LKGFPEIP-----FCNIDGSG---IERIPSSV-------LKLNKCSKLESLPSSLCMFKS 411
           ++  P  P       +    G   ++++PSS+             + +E+LP  +     
Sbjct: 177 VEELPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHF 236

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
           +  LE+++C+ L+ LP  +G+++ L  L +EG+ I E+P+   +L  L +L++  C+  +
Sbjct: 237 IRKLELMNCEFLKFLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLK 296

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-------------KGTA-- 515
            LP      KSL  L + +      LP+  GNL  L VL +              GT+  
Sbjct: 297 RLPESFGDLKSLHHLYMKETL-VSELPESFGNLSKLMVLEMLKNPLFRISESNAPGTSEE 355

Query: 516 --IREVPESLGQLSSLEWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
               EVP S   L+SLE L      +   IP+ L +LSSL+ L L NN    +P  L  L
Sbjct: 356 PRFVEVPNSFSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGL 415

Query: 573 SSLKYLDLFE-NNLDRIP 589
           S+L+ L L +   L R+P
Sbjct: 416 SNLQELSLRDCRELKRLP 433



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 233/491 (47%), Gaps = 72/491 (14%)

Query: 90  LKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           L+++ L+   LL K+P  +   + L  LDL  CS+L+E    +  L  LE L L  C +L
Sbjct: 1   LEKLVLERCNLLVKVPRSVGNLRKLLQLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNL 60

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGV-GIEELPSSIKCLSN 205
           + LP +I S   LK L+L G + + NLP  +        L L+G   I+ELP+ I  L++
Sbjct: 61  SVLPENIGSMPCLKELLLDGTA-ISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTS 119

Query: 206 IGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL--------QFLEMPSCNIDGTRSK 257
           + +L +     L N+ +SI  L+ L+ + + RC +L        + + +    I G+  +
Sbjct: 120 LEDLYLDDTA-LRNLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKLFITGSAVE 178

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
           E P          +P SLP       SLT      C   +++P  +G L +L +L ++ T
Sbjct: 179 ELPL---------KPSSLP-------SLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTT 222

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
            I  LP+ +G L  + KLEL NC  L+++  SI  + ++ S+                 N
Sbjct: 223 LIEALPKEIGALHFIRKLELMNCEFLKFLPKSIGDMDTLCSL-----------------N 265

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           ++GS IE +P    KL                ++L  L + +C  L+RLP+  G+L++L 
Sbjct: 266 LEGSNIEELPEEFGKL----------------ENLVELRMSNCTMLKRLPESFGDLKSLH 309

Query: 438 ELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            L ++ T + E+P+S   L+       K    E L + L+      +    +   F+ +P
Sbjct: 310 HLYMKETLVSELPESFGNLS-------KLMVLEMLKNPLFRISESNAPGTSEEPRFVEVP 362

Query: 498 DEIGNLEYLKVLTIKGTAIR-EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
           +   NL  L+ L  +   I  ++P+ L +LSSL  L L +N    +P SL  LS+L  L 
Sbjct: 363 NSFSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELS 422

Query: 557 LSN-NNLERIP 566
           L +   L+R+P
Sbjct: 423 LRDCRELKRLP 433



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 28/338 (8%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L L++C             K L  L +  C N   LP+ +G++  L  L++DGTAI  L
Sbjct: 27  QLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNL 86

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P+ + +L  L KL L  C  ++ + + I KL S+E +                  +D + 
Sbjct: 87  PDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDL-----------------YLDDTA 129

Query: 383 IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           +  +P+S+        L L +C+ L  +P S+    SL  L  I    +E LP +  +L 
Sbjct: 130 LRNLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKL-FITGSAVEELPLKPSSLP 188

Query: 435 ALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
           +L +    G   +++VP S+  L          +  E+LP  +     +  LE+++C+  
Sbjct: 189 SLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNCEFL 248

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL 552
             LP  IG+++ L  L ++G+ I E+PE  G+L +L  L +S+   L+ +PES   L SL
Sbjct: 249 KFLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPESFGDLKSL 308

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L +    +  +PE    LS L  L++ +N L RI E
Sbjct: 309 HHLYMKETLVSELPESFGNLSKLMVLEMLKNPLFRISE 346



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 177/406 (43%), Gaps = 76/406 (18%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP----------DLSL 109
           NI     L  L + G+ ++ L D +  L  L+++ L   + + +LP          DL L
Sbjct: 66  NIGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDLYL 125

Query: 110 --------------AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL--DRCKSLTSLPT 153
                          +NL+ L L  C+SL++   SI  L  L+ L +     + L   P+
Sbjct: 126 DDTALRNLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPS 185

Query: 154 SIHSKYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY 212
           S+ S  L      GC  LK +P  +   +    L L    IE LP  I  L  I +L + 
Sbjct: 186 SLPS--LTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELM 243

Query: 213 SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           +C+ L+ +  SI  +  L S+                N++G+  +E P    KL      
Sbjct: 244 NCEFLKFLPKSIGDMDTLCSL----------------NLEGSNIEELPEEFGKL------ 281

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
                     ++L  L + +C   +RLP+  G+L++L+ L +  T + ELPE  G L+ L
Sbjct: 282 ----------ENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKL 331

Query: 333 SKLE-LKNCSELEYISSSIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPS 388
             LE LKN   L  IS S     S E   +E+ N  SNL    E+   +   SG  +IP 
Sbjct: 332 MVLEMLKN--PLFRISESNAPGTSEEPRFVEVPNSFSNLTSLEELDARSWRISG--KIPD 387

Query: 389 SVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLP 427
            + KL+   KL        SLPSSL    +L  L + DC++L+RLP
Sbjct: 388 DLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLRDCRELKRLP 433



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 3/146 (2%)

Query: 448 EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
           +VP+S+  L  L +L L++CS+       +   K L  L +  C N   LP+ IG++  L
Sbjct: 14  KVPRSVGNLRKLLQLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCL 73

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           K L + GTAI  +P+S+ +L  LE L L    ++Q +P  + +L+SL  L L +  L  +
Sbjct: 74  KELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDLYLDDTALRNL 133

Query: 566 PERLDPLSSLKYLDLFE-NNLDRIPE 590
           P  +  L +L+ L L    +L +IP+
Sbjct: 134 PNSIGDLKNLQKLHLMRCTSLSKIPD 159



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 37/348 (10%)

Query: 44  TELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           T LR        LK L  LH        M  + ++++ D +  L+SLK++ +  S +  +
Sbjct: 128 TALRNLPNSIGDLKNLQKLHL-------MRCTSLSKIPDSINELISLKKLFITGSAV-EE 179

Query: 104 LP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLK 161
           LP   S   +L     G C  L +  SSI  LN L  L L+    + +LP  I +  +++
Sbjct: 180 LPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNT-TLIEALPKEIGALHFIR 238

Query: 162 RLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
           +L L  C  LK LPK +       +L L G  IEELP     L N+ EL + +C  L+ +
Sbjct: 239 KLELMNCEFLKFLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRL 298

Query: 221 SSSIFKLQ-----FLESIRIHRCP-------NLQFLEMPSCNIDGTRSKEQPSSELKLKK 268
             S   L+     +++   +   P        L  LEM    +        P +     +
Sbjct: 299 PESFGDLKSLHHLYMKETLVSELPESFGNLSKLMVLEMLKNPLFRISESNAPGT----SE 354

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFE---RLPDELGNLQALNRLIIDGTAIRELPEG 325
            PR   +P+    F +LTSLE +D  ++    ++PD+L  L +L +L +       LP  
Sbjct: 355 EPRFVEVPNS---FSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLNLGNNYFHSLPSS 411

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           L  L+ L +L L++C EL+ +     KL   E + ++NC +L+   ++
Sbjct: 412 LVGLSNLQELSLRDCRELKRLPPLPCKL---EHLNMANCFSLESVSDL 456


>gi|15810375|gb|AAL07075.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 695

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 154/303 (50%), Gaps = 20/303 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           MSKI  E  I    F  M  L+ LKF    N  ++  ++ +P   LR   W  +P K L 
Sbjct: 321 MSKIG-EFSIRKRVFEGMHNLKFLKFYNG-NVSLLEDMKYLP--RLRLLHWDSYPRKRLP 376

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L +  SK+ +LW  +Q L +LK+I+L+YS  L ++P+LS A NLE L L 
Sbjct: 377 LTFQPECLVELYLVSSKLEKLWGGIQPLTNLKKINLEYSSNLKEIPNLSKATNLETLRLT 436

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI  L+KLEVLD   C  L  +PT I+   LK + +  CS L++ P +++
Sbjct: 437 GCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKINLSSLKMVGMDDCSRLRSFPDIST 496

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLES-IR-- 234
                 L + G  I+E P+SI  +  +G LLI   S KRL ++  S+  L    S I+  
Sbjct: 497 N--IKILSIRGTKIKEFPASI--VGGLGILLIGSRSLKRLTHVPESVSYLDLSHSDIKMI 552

Query: 235 ---IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF-KSLTSLEI 290
              +   P+LQ L + +C      S E  S  L+     R  SL S  C F + +  LE 
Sbjct: 553 PDYVIGLPHLQHLTIGNCR--KLVSIEGHSPSLESIVAYRCISLESMCCSFHRPILKLEF 610

Query: 291 IDC 293
            +C
Sbjct: 611 YNC 613



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 38/311 (12%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           SKLE L   +    +L  + +     L+ +P+ L     LE LR+ G   + E+P S++ 
Sbjct: 392 SKLEKLWGGIQPLTNLKKINLEYSSNLKEIPN-LSKATNLETLRLTGCESLMEIPSSISN 450

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L    CS    +P+++ +S SL  + + DC      PD   N+   K+L+I+GT
Sbjct: 451 LHKLEVLDASGCSKLHVIPTKINLS-SLKMVGMDDCSRLRSFPDISTNI---KILSIRGT 506

Query: 515 AIREVPESL-GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            I+E P S+ G L  L     S   L  +PES++ L       LS+++++ IP+ +  L 
Sbjct: 507 KIKEFPASIVGGLGILLIGSRSLKRLTHVPESVSYLD------LSHSDIKMIPDYVIGLP 560

Query: 574 SLKYLDL-----------FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
            L++L +              +L+ I  Y      S+   F    L ++  NCLKLD   
Sbjct: 561 HLQHLTIGNCRKLVSIEGHSPSLESIVAYRCISLESMCCSFHRPILKLEFYNCLKLDNES 620

Query: 623 LSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--TISLKTPQPTGYNKLM 680
              II         +G   I    +  GNE+P  F HQ+ G+  TISL       ++   
Sbjct: 621 KRRIILH-------SGHRII----FLTGNEVPAQFTHQTRGNSITISLSPGGEESFSVSS 669

Query: 681 GFAFCVVVACS 691
            F  C+V++ S
Sbjct: 670 RFRACLVLSPS 680


>gi|113205407|gb|ABI34381.1| Leucine Rich Repeat family protein [Solanum demissum]
          Length = 487

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 14/263 (5%)

Query: 85  QNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
           Q L SL+++DL  S  L + PD +   NLE L+L YC  L E H S+ Y  KL  L+L+ 
Sbjct: 19  QYLPSLRKLDLSLSDSLVQTPDFTGMPNLEYLNLEYCRKLEEVHYSLAYCEKLIELNLNW 78

Query: 145 CKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV--GIEELPSSIKC 202
           C +L   P  ++ K L+ + L+ C++L+  P+     ++S L +L    GI ELPSSI+ 
Sbjct: 79  CTNLGRFPW-VNMKSLESMDLQYCNSLREFPEFAGA-MKSELVILSANSGIRELPSSIQY 136

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
           L+++ EL +   K LE + SSI KL+ L ++ +  C  ++ L     +++     +   +
Sbjct: 137 LTHLTELDLSGMKNLEALPSSIVKLKGLVTLNVSYCSKIKSLPEEIGDLENLEGLDATFT 196

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF--ERLPDELGNLQALNRLIIDGTAIR 320
            +      RP   PS       L SL+ +   NF   R+P+++G L +L  L++ G    
Sbjct: 197 LIS-----RP---PSSVVRLNKLKSLKFLSSSNFIDGRIPEDIGYLSSLKGLLLQGDNFE 248

Query: 321 ELPEGLGQLALLSKLELKNCSEL 343
            LP+ + QL  L  L L NC  L
Sbjct: 249 HLPQSIAQLGALRVLYLVNCKRL 271



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 38/339 (11%)

Query: 366 NLKGFPEIPFCNIDG-SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLE 416
           +  G P + + N++    +E +  S+        L LN C+ L   P      KSL S++
Sbjct: 40  DFTGMPNLEYLNLEYCRKLEEVHYSLAYCEKLIELNLNWCTNLGRFP--WVNMKSLESMD 97

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           +  C  L   P+  G +++   +    +GIRE+P S+  L  L++L L    + E+LPS 
Sbjct: 98  LQYCNSLREFPEFAGAMKSELVILSANSGIRELPSSIQYLTHLTELDLSGMKNLEALPSS 157

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES---LGQLSSLEWL 532
           +   K L +L +  C     LP+EIG+LE L+ L    T I   P S   L +L SL++L
Sbjct: 158 IVKLKGLVTLNVSYCSKIKSLPEEIGDLENLEGLDATFTLISRPPSSVVRLNKLKSLKFL 217

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEY 591
             S+     IPE +  LSSL  L L  +N E +P+ +  L +L+ L L     L ++PE 
Sbjct: 218 SSSNFIDGRIPEDIGYLSSLKGLLLQGDNFEHLPQSIAQLGALRVLYLVNCKRLTQLPE- 276

Query: 592 LRSFPTSIPSEFTSLRLSVDLRN---CLKLDPNELSEIIKDGWMKQSVNGETYITKSMYF 648
              FP  + +      +  D  N   C  L  N +S    D     S++   + +     
Sbjct: 277 ---FPPQLDT------ICADWHNDLICNSLFQN-ISSFQHDISASDSLSLRVFTSS---- 322

Query: 649 PGNEIPKWFRHQSTGSTISLKTPQPTGY--NKLMGFAFC 685
            G+ IP WF HQ    ++S+   +   Y  +  +GFA C
Sbjct: 323 -GSNIPSWFHHQGMDKSVSVNLHE-NWYVSDNFLGFAVC 359



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 43/277 (15%)

Query: 224 IFKLQFLESIR---------------IHRCPNLQFLEMPSCN----IDGTRSKEQPSSEL 264
           +F+ Q+L S+R                   PNL++L +  C     +  + +  +   EL
Sbjct: 15  VFEHQYLPSLRKLDLSLSDSLVQTPDFTGMPNLEYLNLEYCRKLEEVHYSLAYCEKLIEL 74

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
            L  C      P      KSL S+++  C +    P+  G +++   ++   + IRELP 
Sbjct: 75  NLNWCTNLGRFP--WVNMKSLESMDLQYCNSLREFPEFAGAMKSELVILSANSGIRELPS 132

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCNIDG-- 380
            +  L  L++L+L     LE + SSI KLK + ++ +S CS +K  PE      N++G  
Sbjct: 133 SIQYLTHLTELDLSGMKNLEALPSSIVKLKGLVTLNVSYCSKIKSLPEEIGDLENLEGLD 192

Query: 381 ---SGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
              + I R PSSV++LNK   L          K L+S   ID     R+P+++G L +L+
Sbjct: 193 ATFTLISRPPSSVVRLNKLKSL----------KFLSSSNFIDG----RIPEDIGYLSSLK 238

Query: 438 ELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            L ++G     +P+S+AQL AL  L L  C     LP
Sbjct: 239 GLLLQGDNFEHLPQSIAQLGALRVLYLVNCKRLTQLP 275



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 76/186 (40%), Gaps = 51/186 (27%)

Query: 86  NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC 145
           N+ SL+ +DL+Y   L + P+ + A   E++ L   S + E  SSIQYL  L  LDL   
Sbjct: 89  NMKSLESMDLQYCNSLREFPEFAGAMKSELVILSANSGIRELPSSIQYLTHLTELDLSGM 148

Query: 146 KSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP----------------------------- 175
           K+L +LP+SI   K L  L +  CS +K+LP                             
Sbjct: 149 KNLEALPSSIVKLKGLVTLNVSYCSKIKSLPEEIGDLENLEGLDATFTLISRPPSSVVRL 208

Query: 176 -KMTSCHLRST--------------------LPLLGVGIEELPSSIKCLSNIGELLIYSC 214
            K+ S    S+                    L L G   E LP SI  L  +  L + +C
Sbjct: 209 NKLKSLKFLSSSNFIDGRIPEDIGYLSSLKGLLLQGDNFEHLPQSIAQLGALRVLYLVNC 268

Query: 215 KRLENI 220
           KRL  +
Sbjct: 269 KRLTQL 274


>gi|108738458|gb|ABG00762.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738512|gb|ABG00789.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738514|gb|ABG00790.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-VKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 199/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTA++ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|108738456|gb|ABG00761.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738547|gb|ABG00806.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 242/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 -----QFLEMPSCN---IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   E+ S     I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSIYELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P  +   L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPD-SIYELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 171/366 (46%), Gaps = 38/366 (10%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
           +SE+  N   FSKM +LRLLK C  +   +   L  +P + L+   W   PLK L     
Sbjct: 545 DSEVLWNTGAFSKMGQLRLLKLCDMQ---LPLGLNCLP-SALQVLHWRGCPLKAL----- 595

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
                          LW   + L  LK IDL +SK L + PD   A NLE L L  C+SL
Sbjct: 596 --------------PLWHGTKLLEKLKCIDLSFSKNLKQSPDFDAAPNLESLVLEGCTSL 641

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLR 183
           TE H S+    KL +++L+ CK L +LP+++    LK L L GCS  K LP+   S    
Sbjct: 642 TEVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEMSSLKYLNLSGCSEFKYLPEFGESMEQL 701

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           S L L    I +LPSS+ CL  +  L + +CK L  +  +  KL+ L+ + +  C  L  
Sbjct: 702 SLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGCSKL-- 759

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP-NFERLPDE 302
                C++     + +   ++ L      +SLP  +    SL  + +  C  + E +PDE
Sbjct: 760 -----CSLPDGLEEMKCLEQICLSA---DDSLPPSKLNLPSLKRINLSYCNLSKESIPDE 811

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
             +L  L +          LP  + +L  L  L L  C +L+ +        S++ ++ S
Sbjct: 812 FCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRLPELP---SSMQQLDAS 868

Query: 363 NCSNLK 368
           NC++L+
Sbjct: 869 NCTSLE 874



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 190/423 (44%), Gaps = 53/423 (12%)

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI-----SSSIFKLKSVESIEIS 362
           AL  L   G  ++ LP   G   LL KL+   C +L +      S       ++ES+ + 
Sbjct: 581 ALQVLHWRGCPLKALPLWHGT-KLLEKLK---CIDLSFSKNLKQSPDFDAAPNLESLVLE 636

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
            C++L          +  S +     +++ L  C +L++LPS++ M  SL  L +  C +
Sbjct: 637 GCTSLT--------EVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEM-SSLKYLNLSGCSE 687

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKS 481
            + LP+   ++E L  L ++ T I ++P SL  L  L+ L LK C +   LP   +  KS
Sbjct: 688 FKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKS 747

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL-- 539
           L  L++  C     LPD +  ++ L+ + +  +A   +P S   L SL+ + LS  NL  
Sbjct: 748 LKFLDVRGCSKLCSLPDGLEEMKCLEQICL--SADDSLPPSKLNLPSLKRINLSYCNLSK 805

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTS 598
           + IP+    LS L     + NN   +P  +  L+ L+ L L     L R+PE   S    
Sbjct: 806 ESIPDEFCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRLPELPSSMQQL 865

Query: 599 IPSEFTSLRLSVDLRNCLKLDPNELSEIIKD-----------GWMKQSVNG------ETY 641
             S  TSL  S       K +P++   +              G + + + G      E  
Sbjct: 866 DASNCTSLETS-------KFNPSKPRSLFASPAKLHFPRELKGHLPRELIGLFENMQELC 918

Query: 642 ITKS---MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFC-VVVACSV-SECC 696
           + K+   M+  G+EIP WF  + + S   +  P     N+ +GFA C ++V+ +V  E C
Sbjct: 919 LPKTRFGMFITGSEIPSWFVPRKSVSFAKIAVPHNCPVNEWVGFALCFLLVSYAVPPEAC 978

Query: 697 RHE 699
           RHE
Sbjct: 979 RHE 981



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 141/315 (44%), Gaps = 28/315 (8%)

Query: 189 LGVGIEELPSSIKCLSNIG-----ELLIYSCKRLENIS--SSIFKLQFLESIRIHRCPNL 241
           L +G+  LPS+++ L   G       L +  K LE +      F     +S      PNL
Sbjct: 571 LPLGLNCLPSALQVLHWRGCPLKALPLWHGTKLLEKLKCIDLSFSKNLKQSPDFDAAPNL 630

Query: 242 QFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           + L +  C     +  +  + +  + + L+ C R ++LPS   M  SL  L +  C  F+
Sbjct: 631 ESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEM-SSLKYLNLSGCSEFK 689

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP+   +++ L+ LI+  T I +LP  LG L  L+ L LKNC  L  +  +  KLKS++
Sbjct: 690 YLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLK 749

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
            +++  CS L   P+         G+E +    L+    S  +SLP S     SL  + +
Sbjct: 750 FLDVRGCSKLCSLPD---------GLEEM--KCLEQICLSADDSLPPSKLNLPSLKRINL 798

Query: 418 IDCK-KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
             C    E +PDE  +L  L++          +P  +++L  L  L L  C   + LP  
Sbjct: 799 SYCNLSKESIPDEFCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRLPE- 857

Query: 476 LYVSKSLTSLEIIDC 490
             +  S+  L+  +C
Sbjct: 858 --LPSSMQQLDASNC 870



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 27/247 (10%)

Query: 382 GIERIPSS--VLKLNKCSKLESLP--SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           G+  +PS+  VL    C  L++LP      + + L  +++   K L++ PD       LE
Sbjct: 574 GLNCLPSALQVLHWRGCP-LKALPLWHGTKLLEKLKCIDLSFSKNLKQSPD-FDAAPNLE 631

Query: 438 ELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            L +EG T + EV  SL +   L+ + L+ C   ++LPS + +S SL  L +  C  F  
Sbjct: 632 SLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEMS-SLKYLNLSGCSEFKY 690

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVS 554
           LP+   ++E L +L +K T I ++P SLG L  L  L L +  NL  +P++ ++L SL  
Sbjct: 691 LPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKF 750

Query: 555 LKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT--------------SI 599
           L +   + L  +P+ L+ +  L+ + L  +  D +P    + P+              SI
Sbjct: 751 LDVRGCSKLCSLPDGLEEMKCLEQICLSAD--DSLPPSKLNLPSLKRINLSYCNLSKESI 808

Query: 600 PSEFTSL 606
           P EF  L
Sbjct: 809 PDEFCHL 815


>gi|108738498|gb|ABG00782.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 241/516 (46%), Gaps = 73/516 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 -----QFLEMPSCN---IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   E+ S     I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSIYELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESL 472
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+ L  L++ K   F   
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRIS 421

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-EVPESLGQLSSLEW 531
            S +      TS E      F+ +P+    L  L+ L      I  ++P+ L +LS L  
Sbjct: 422 ESNV----PGTSEE----PRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMK 473

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
           L L +N    +P SL +LS+L    L +   L+R+P
Sbjct: 474 LNLGNNYFHSLPSSLVKLSNLQDFSLRDCRELKRLP 509



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P  +   L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPD-SIYELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQDFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|15242354|ref|NP_199338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5459305|emb|CAB50708.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|10176996|dbj|BAB10246.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007838|gb|AED95221.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 22/329 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           +S++  E  ++   F  M  LR LKF        C + NK  +     +P  E+R   W 
Sbjct: 564 LSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWL 623

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPL+TL N  +  NLV LK+P S++ QLW+  ++   L+ +DL +S  L  L  LS A+
Sbjct: 624 KFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAE 683

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
            L+ L+L  C++L      ++ +  L  L+L  C SL SLP  ++   LK L L GCS  
Sbjct: 684 KLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLP-EMNLISLKTLTLSGCSTF 742

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K  P ++      TL L G  I +LP +++ L  +  L +  CK LE I   + +L+ L+
Sbjct: 743 KEFPLISDN--IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQ 800

Query: 232 SIRIHRCPNLQF---LEMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQCM 281
            + +  C NL+    +++   NI   DGT  +  P       L L +  +   LP G   
Sbjct: 801 ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALN 310
              L  L++  C +   +P+   NLQ L+
Sbjct: 861 LSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 215/477 (45%), Gaps = 73/477 (15%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             E LP++   +  ++ L +  + + +L EG      L  ++L + S+L  +S  + K + 
Sbjct: 627  LETLPNDFNPINLVD-LKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSG-LSKAEK 684

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            ++ + +  C+ LK FP       D   ++ +  + L L  C+ LESLP    +  SL +L
Sbjct: 685  LQRLNLEGCTTLKAFPH------DMKKMKML--AFLNLKGCTSLESLPEMNLI--SLKTL 734

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
             +  C   +  P    N+E L    ++GT I ++P ++ +L  L  L +K C   E +P 
Sbjct: 735  TLSGCSTFKEFPLISDNIETL---YLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPG 791

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            R+   K+L  L + DC N    P EI ++ +L +L + GTAI  +P    QL S+++L L
Sbjct: 792  RVGELKALQELILSDCLNLKIFP-EI-DISFLNILLLDGTAIEVMP----QLPSVQYLCL 845

Query: 535  SDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY-----LDLFENNLDR 587
            S N  +  +P  ++QLS L  L L    +L  +PE    L  L       L      L R
Sbjct: 846  SRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLAR 905

Query: 588  IPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG--------WMKQSVNGE 639
            I    ++  T I   FT         NC  L+     EI            + ++  NG 
Sbjct: 906  IMPTEQNHSTFI---FT---------NCENLEQAAKEEITSYAQRKCQLLSYARKRYNG- 952

Query: 640  TYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECC 696
              +++S++   FPG E+P WF H++ GS + +K        KL G A C VV+C      
Sbjct: 953  GLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSC------ 1006

Query: 697  RHESVEDDRKCNLFDVVCDRRSEGYD----SYT------SSYLGKISHVESDHVFLG 743
                ++   + +   V C  + +  D    +YT      + + G    +E DHVF+G
Sbjct: 1007 ----LDPQDQVSRLSVTCTFKVKDEDKSWVAYTCPVGSWTRHGGGKDKIELDHVFIG 1059



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 18/203 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   ESLP    +  SL +L +  C  F+  P    N++ L    +DGTAI +LP
Sbjct: 712 LNLKGCTSLESLPEMNLI--SLKTLTLSGCSTFKEFPLISDNIETL---YLDGTAISQLP 766

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCNI--- 378
             + +L  L  L +K+C  LE I   + +LK+++ + +S+C NLK FPE  I F NI   
Sbjct: 767 MNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEIDISFLNILLL 826

Query: 379 DGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           DG+ IE +P       L L++ +K+  LP  +     L  L++  C  L  +P+   NL+
Sbjct: 827 DGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQ 886

Query: 435 ALEELRVEG-TGIREVPKSLAQL 456
            L+     G + ++ V K LA++
Sbjct: 887 CLD---AHGCSSLKTVSKPLARI 906


>gi|5823585|emb|CAB53784.1| disease resistance protein rps4-RLD [Arabidopsis thaliana]
          Length = 1217

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 22/329 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           +S++  E  ++   F  M  LR LKF        C + NK  +     +P  E+R   W 
Sbjct: 564 LSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWL 623

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPL+TL N  +  NLV LK+P S++ QLW+  ++   L+ +DL +S  L  L  LS A+
Sbjct: 624 KFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAE 683

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
            L+ L+L  C++L      ++ +  L  L+L  C SL SLP  ++   LK L L GCS  
Sbjct: 684 KLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLP-EMNLISLKTLTLSGCSTF 742

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K  P ++      TL L G  I +LP +++ L  +  L +  CK LE I   + +L+ L+
Sbjct: 743 KEFPLISDN--IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQ 800

Query: 232 SIRIHRCPNLQF---LEMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQCM 281
            + +  C NL+    +++   NI   DGT  +  P       L L +  +   LP G   
Sbjct: 801 ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALN 310
              L  L++  C +   +P+   NLQ L+
Sbjct: 861 LSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 214/477 (44%), Gaps = 73/477 (15%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             E LP++   +  ++ L +  + + +L EG      L  ++L + S+L  +S  + K + 
Sbjct: 627  LETLPNDFNPINLVD-LKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSG-LSKAEK 684

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            ++ + +  C+ LK FP       D   ++ +  + L L  C+ LESLP    +  SL +L
Sbjct: 685  LQRLNLEGCTTLKAFPH------DMKKMKML--AFLNLKGCTSLESLPEMNLI--SLKTL 734

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
             +  C   +  P    N+E L    ++GT I ++P ++ +L  L  L +K C   E +P 
Sbjct: 735  TLSGCSTFKEFPLISDNIETL---YLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPG 791

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            R+   K+L  L + DC N    P EI ++ +L +L + GTAI  +P    QL S+++L L
Sbjct: 792  RVGELKALQELILSDCLNLKIFP-EI-DISFLNILLLDGTAIEVMP----QLPSVQYLCL 845

Query: 535  SDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY-----LDLFENNLDR 587
            S N  +  +P  ++QLS L  L L    +L  +PE    L  L       L      L R
Sbjct: 846  SRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLAR 905

Query: 588  IPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG--------WMKQSVNGE 639
            I    ++  T I   FT         NC  L+     EI            + ++  NG 
Sbjct: 906  IMPTEQNHSTFI---FT---------NCENLEQAAKEEITSYAQRKCQLLSYARKRHNG- 952

Query: 640  TYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECC 696
              +++S++   FPG E+P WF H++ GS + +K        KL G A C VV+C      
Sbjct: 953  GLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSC------ 1006

Query: 697  RHESVEDDRKCNLFDVVCDRRSEGYDS----YT------SSYLGKISHVESDHVFLG 743
                ++   + +   V C  + +  D     YT      + + G    +E DHVF+G
Sbjct: 1007 ----LDPQDQVSRLSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIG 1059



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 18/203 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   ESLP    +  SL +L +  C  F+  P    N++ L    +DGTAI +LP
Sbjct: 712 LNLKGCTSLESLPEMNLI--SLKTLTLSGCSTFKEFPLISDNIETL---YLDGTAISQLP 766

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCNI--- 378
             + +L  L  L +K+C  LE I   + +LK+++ + +S+C NLK FPE  I F NI   
Sbjct: 767 MNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEIDISFLNILLL 826

Query: 379 DGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           DG+ IE +P       L L++ +K+  LP  +     L  L++  C  L  +P+   NL+
Sbjct: 827 DGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQ 886

Query: 435 ALEELRVEG-TGIREVPKSLAQL 456
            L+     G + ++ V K LA++
Sbjct: 887 CLD---AHGCSSLKTVSKPLARI 906


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 141/268 (52%), Gaps = 13/268 (4%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           + Q N   FSKM++LRLLK     N  +    E +   +LR+ EW+ +P K+L   L  +
Sbjct: 382 DAQWNMEAFSKMSKLRLLKI---NNVQLSEGPEDLS-NKLRFLEWYSYPSKSLPAGLQVD 437

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ ++LK I+L YS  L++ PDL+   NLE L L  C+SL+
Sbjct: 438 ELVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTGIPNLESLILEGCTSLS 497

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+     L+ ++L  CKS+  LP+++  + LK   L GC  L+  P +  + +   
Sbjct: 498 EVHPSLGSHKNLQYVNLVNCKSIRILPSNLEMESLKVFTLDGCLKLEKFPDVVRNMNCLM 557

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI+ L  +G L + SCK L++I SSI  L+ L+ + +  C  L+  
Sbjct: 558 VLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELK-- 615

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRP 272
                NI     K +   E      PRP
Sbjct: 616 -----NIPKNLGKVESLEEFDGLSNPRP 638



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 21/176 (11%)

Query: 283 KSLTSLEIIDCP---NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L+II+     N  R PD L  +  L  LI++G T++ E+   LG    L  + L 
Sbjct: 457 KSALNLKIINLSYSLNLSRTPD-LTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLV 515

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV- 390
           NC  +  + S++ +++S++   +  C  L+ FP++           +D +GI ++ SS+ 
Sbjct: 516 NCKSIRILPSNL-EMESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIR 574

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                  L +N C  L+S+PSS+   KSL  L++  C +L+ +P  LG +E+LEE 
Sbjct: 575 HLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESLEEF 630



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N +  +L Y   S   LK +    S+ +S   +L G P + 
Sbjct: 428 KSLPAGL-QVDELVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTGIPNLE 486

Query: 375 FCNIDG--SGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G  S  E  PS         + L  C  +  LPS+L M +SL    +  C KLE+
Sbjct: 487 SLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNLEM-ESLKVFTLDGCLKLEK 545

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD + N+  L  LR++ TGI ++  S+  L  L  L +  C + +S+PS +   KSL  
Sbjct: 546 FPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKK 605

Query: 485 LEIIDCKNFMRLPDEIGNLEYLK 507
           L++  C     +P  +G +E L+
Sbjct: 606 LDLSGCSELKNIPKNLGKVESLE 628



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 14/192 (7%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLEN--ISSSIFKLQFLESIRIHRCPNLQFLEMP 247
           G+ ++EL       SN+ +L  Y CK   N  I +  + L    +  +   PNL+ L + 
Sbjct: 433 GLQVDELVELHMANSNLDQLW-YGCKSALNLKIINLSYSLNLSRTPDLTGIPNLESLILE 491

Query: 248 SCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            C    + S+  PS         + L  C     LPS   M +SL    +  C   E+ P
Sbjct: 492 GCT---SLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNLEM-ESLKVFTLDGCLKLEKFP 547

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           D + N+  L  L +D T I +L   +  L  L  L + +C  L+ I SSI  LKS++ ++
Sbjct: 548 DVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLD 607

Query: 361 ISNCSNLKGFPE 372
           +S CS LK  P+
Sbjct: 608 LSGCSELKNIPK 619



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 37/206 (17%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           L  L L+ C+S   +   L   K+L  + +++CK+   LP  +  +E LKV T+ G   +
Sbjct: 485 LESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNL-EMESLKVFTLDGCLKL 543

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
            + P+ +  ++ L  L L +  +  +  S+  L  L  L +++  NL+ IP  +  L SL
Sbjct: 544 EKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSL 603

Query: 576 KYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
           K LDL   + L  IP+ L    +    EF  L            +P     I+       
Sbjct: 604 KKLDLSGCSELKNIPKNLGKVESL--EEFDGLS-----------NPRPGFGIV------- 643

Query: 635 SVNGETYITKSMYFPGNEIPKWFRHQ 660
                         PGNEIP WF H+
Sbjct: 644 -------------VPGNEIPGWFNHR 656


>gi|237769815|dbj|BAH59426.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 22/329 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           +S++  E  ++   F  M  LR LKF        C + NK  +     +P  E+R   W 
Sbjct: 564 LSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWL 623

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPL+TL N  +  NLV LK+P S++ QLW+  ++   L+ +DL +S  L  L  LS A+
Sbjct: 624 KFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAE 683

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
            L+ L+L  C++L      ++ +  L  L+L  C SL SLP  ++   LK L L GCS  
Sbjct: 684 KLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLP-EMNLISLKTLTLSGCSTF 742

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K  P ++      TL L G  I +LP +++ L  +  L +  CK LE I   + +L+ L+
Sbjct: 743 KEFPLISDN--IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQ 800

Query: 232 SIRIHRCPNLQF---LEMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQCM 281
            + +  C NL+    +++   NI   DGT  +  P       L L +  +   LP G   
Sbjct: 801 ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALN 310
              L  L++  C +   +P+   NLQ L+
Sbjct: 861 LSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 214/477 (44%), Gaps = 73/477 (15%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             E LP++   +  ++ L +  + + +L EG      L  ++L + S+L  +S  + K + 
Sbjct: 627  LETLPNDFNPINLVD-LKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSG-LSKAEK 684

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            ++ + +  C+ LK FP       D   ++ +  + L L  C+ LESLP    +  SL +L
Sbjct: 685  LQRLNLEGCTTLKAFPH------DMKKMKML--AFLNLKGCTSLESLPEMNLI--SLKTL 734

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
             +  C   +  P    N+E L    ++GT I ++P ++ +L  L  L +K C   E +P 
Sbjct: 735  TLSGCSTFKEFPLISDNIETL---YLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPG 791

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            R+   K+L  L + DC N    P EI ++ +L +L + GTAI  +P    QL S+++L L
Sbjct: 792  RVGELKALQELILSDCLNLKIFP-EI-DISFLNILLLDGTAIEVMP----QLPSVQYLCL 845

Query: 535  SDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY-----LDLFENNLDR 587
            S N  +  +P  ++QLS L  L L    +L  +PE    L  L       L      L R
Sbjct: 846  SRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLAR 905

Query: 588  IPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG--------WMKQSVNGE 639
            I    ++  T I   FT         NC  L+     EI            + ++  NG 
Sbjct: 906  IMPTEQNHSTFI---FT---------NCENLEQAAKEEITSYAQRKCQLLSYARKRYNG- 952

Query: 640  TYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECC 696
              +++S++   FPG E+P WF H++ GS + +K        KL G A C VV+C      
Sbjct: 953  GLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSC------ 1006

Query: 697  RHESVEDDRKCNLFDVVCDRRSEGYDS----YT------SSYLGKISHVESDHVFLG 743
                ++   + +   V C  + +  D     YT      + + G    +E DHVF+G
Sbjct: 1007 ----LDPQDQVSRLSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIG 1059



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 18/203 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   ESLP    +  SL +L +  C  F+  P    N++ L    +DGTAI +LP
Sbjct: 712 LNLKGCTSLESLPEMNLI--SLKTLTLSGCSTFKEFPLISDNIETL---YLDGTAISQLP 766

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCNI--- 378
             + +L  L  L +K+C  LE I   + +LK+++ + +S+C NLK FPE  I F NI   
Sbjct: 767 MNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEIDISFLNILLL 826

Query: 379 DGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           DG+ IE +P       L L++ +K+  LP  +     L  L++  C  L  +P+   NL+
Sbjct: 827 DGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQ 886

Query: 435 ALEELRVEG-TGIREVPKSLAQL 456
            L+     G + ++ V K LA++
Sbjct: 887 CLD---AHGCSSLKTVSKPLARI 906


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 248/541 (45%), Gaps = 65/541 (12%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L++ G+++T++   V +L +L+ + +  +KL T  P +   Q L IL + Y + LTE   
Sbjct: 155 LRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYI-YGNQLTEVPR 213

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
            +  L+ LE L+ +  K  ++ P  +   + L RL++   + L  +P    C L   L +
Sbjct: 214 GVCSLSNLESLEANGNK-FSTFPLGVEKLQKLTRLLIHD-NQLTEVPSGV-CSL-PNLEV 269

Query: 189 LGVGIEEL---PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
           L VG  +L   P  ++ L  + EL IY   +L  + S +  L           PNL+ L 
Sbjct: 270 LDVGNNKLFTFPPGVEKLQKLRELYIYG-NQLTEVPSGVRSL-----------PNLEVLS 317

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRP-------ESLPSGQCMFKSLTSLEIIDCPN--F 296
           +    ++   S   P  E KL+K  +          +PSG C   SL +LE++   N   
Sbjct: 318 V----VNNKLSTFPPGVE-KLQKLTKLGINDNQLTEVPSGVC---SLPNLELLVVGNNML 369

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
              P  +  LQ L  L I G  + E+P G+  L  L  L + N ++L      + KL+ +
Sbjct: 370 STFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYN-NKLSTFPPGVEKLQKL 428

Query: 357 ESIEISN------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             + I +       S +   P +    +  + +   P  V KL K  +L           
Sbjct: 429 RELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLREL----------- 477

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
                  I+  +L  +P  + +L  LE+L V G  IR +P  + +LA L  L +  C  F
Sbjct: 478 ------YINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQ-F 530

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           +  P ++   K+L  L    CK F  +PDE+GNL++L  L+++   +R +P ++  L +L
Sbjct: 531 DEFPRQVLQLKTLEVLYAGGCK-FDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSHLHNL 589

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             + L+ N     PE L +L ++  L +SNNN+ R+P  L     L+ LD+  N L   P
Sbjct: 590 RVVRLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLRDLDVSGNPLAYPP 649

Query: 590 E 590
           +
Sbjct: 650 Q 650



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 249/603 (41%), Gaps = 88/603 (14%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLG 119
           +    +L +L +  +K+T + + +  L  L R+D     +LT LP  +S  Q L+ L + 
Sbjct: 31  VFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDAN-GNMLTSLPQAISSLQGLKQLYV- 88

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL----- 174
           + ++L+E    ++ L  LE L +   K L  LPT I S          C NL N      
Sbjct: 89  HSNNLSELPDGLEDLQNLEWLWVKDNK-LKKLPTKIFS----------CLNLVNFDASNN 137

Query: 175 ------PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
                 P +        L + G  + E+PS +  L N+ ELL     +L      + KLQ
Sbjct: 138 NLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNL-ELLSVGNNKLSTFPPGVEKLQ 196

Query: 229 FLESIRIHRCPNLQFLEMP----------SCNIDGTRSKEQPSSELKLKKCPRP------ 272
            L  + I+     Q  E+P          S   +G +    P    KL+K  R       
Sbjct: 197 KLRILYIYGN---QLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQ 253

Query: 273 -ESLPSGQCMFKSLTSLEIIDCPNFE--RLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
              +PSG C   SL +LE++D  N +    P  +  LQ L  L I G  + E+P G+  L
Sbjct: 254 LTEVPSGVC---SLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSL 310

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISN------CSNLKGFPEIPFCNIDGSGI 383
             L  L + N ++L      + KL+ +  + I++       S +   P +    +  + +
Sbjct: 311 PNLEVLSVVN-NKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNML 369

Query: 384 ERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
              P  V KL K        ++L  +P  +C   +L  L + +  KL   P  +  L+ L
Sbjct: 370 STFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYN-NKLSTFPPGVEKLQKL 428

Query: 437 EELRVEGTGIREVPK---SLAQLALSKLKLKKCSSF----ESLPS--RLYVSK------- 480
            ELR+    + EVP    SL  L +  +   K S+F    E L     LY++        
Sbjct: 429 RELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVP 488

Query: 481 ----SLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
               SL +LE +        RLPD++  L  LK L++      E P  + QL +LE L  
Sbjct: 489 SGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEFPRQVLQLKTLEVLYA 548

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
                 ++P+ +  L  L  L L  N L  +P  +  L +L+ + L +N  D  PE L  
Sbjct: 549 GGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCE 608

Query: 595 FPT 597
            P 
Sbjct: 609 LPA 611



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 208/507 (41%), Gaps = 85/507 (16%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P     +  L LL    +K       +E +    + Y   +Q       +    NL SL+
Sbjct: 166 PSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLE 225

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLG----------- 119
             G+K +     V+ L  L R+ L +   LT++P  +    NLE+LD+G           
Sbjct: 226 ANGNKFSTFPLGVEKLQKLTRL-LIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGV 284

Query: 120 -----------YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRL---- 163
                      Y + LTE  S ++ L  LEVL +   K L++ P  +   + L +L    
Sbjct: 285 EKLQKLRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNK-LSTFPPGVEKLQKLTKLGIND 343

Query: 164 -----VLRGCSNLKNLPKM-TSCHLRSTLP-------------LLGVGIEELPSSIKCLS 204
                V  G  +L NL  +    ++ ST P             + G  + E+P  +  L 
Sbjct: 344 NQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLP 403

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL 264
           N+  L +Y+ K L      + KLQ L  +RIH   + Q  E+PS      R    P+ E+
Sbjct: 404 NLEVLHVYNNK-LSTFPPGVEKLQKLRELRIH---DNQLTEVPS------RVCSLPNLEV 453

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
                 +  + P G      L  L  I+      +P  + +L  L +L + G  IR LP+
Sbjct: 454 LTVGNNKVSTFPPGVEKLTKLREL-YINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPD 512

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP---------- 374
            + +LA L  L + NC + +     + +LK++E +    C     F  +P          
Sbjct: 513 DVTRLARLKALSVPNC-QFDEFPRQVLQLKTLEVLYAGGCK----FDMVPDEVGNLQHLC 567

Query: 375 FCNIDGSGIERIPSS--------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           + +++ + +  +PS+        V++LNK +K ++ P  LC   ++  L+I +   + RL
Sbjct: 568 YLSLEYNLLRTLPSTMSHLHNLRVVRLNK-NKFDTFPEVLCELPAMEKLDISN-NNITRL 625

Query: 427 PDELGNLEALEELRVEGTGIREVPKSL 453
           P  L   + L +L V G  +   P+ +
Sbjct: 626 PTALHRADKLRDLDVSGNPLAYPPQDV 652



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 19/301 (6%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P+E+ ++  L  L +    +  +PE +G+L  L +L+  N + L  +  +I  L+ ++ 
Sbjct: 27  IPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLD-ANGNMLTSLPQAISSLQGLKQ 85

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + + + +NL   P+         G+E + +      K +KL+ LP+ +    +L + +  
Sbjct: 86  LYV-HSNNLSELPD---------GLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDAS 135

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPK---SLAQLALSKLKLKKCSSFESLPSR 475
           +   L   P  +  L+ + ELR+ G  + EVP    SL  L L  +   K S+F     +
Sbjct: 136 N-NNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEK 194

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L   + L     I       +P  + +L  L+ L   G      P  + +L  L  L++ 
Sbjct: 195 LQKLRIL----YIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIH 250

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           DN L  +P  +  L +L  L + NN L   P  ++ L  L+ L ++ N L  +P  +RS 
Sbjct: 251 DNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSL 310

Query: 596 P 596
           P
Sbjct: 311 P 311



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 24/176 (13%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           + L  +P+E+ ++  LE L V    +  +P+++ +L     KL +  +  ++        
Sbjct: 22  QGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQ----KLYRLDANGNM-------- 69

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
            LTSL           P  I +L+ LK L +    + E+P+ L  L +LEWL + DN L+
Sbjct: 70  -LTSL-----------PQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLK 117

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            +P  +    +LV+   SNNNL   P  ++ L  ++ L ++ N L  +P  + S P
Sbjct: 118 KLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLP 173



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L +    +  +PE +  ++ LE L +S+N L  IPE++ +L  L  L  + N L  +P+ 
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQA 76

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSF 595
           +  L  LK L +  NNL  +P+ L   
Sbjct: 77  ISSLQGLKQLYVHSNNLSELPDGLEDL 103


>gi|108738440|gb|ABG00753.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738454|gb|ABG00760.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738468|gb|ABG00767.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738484|gb|ABG00775.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738486|gb|ABG00776.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738488|gb|ABG00777.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738490|gb|ABG00778.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738496|gb|ABG00781.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738520|gb|ABG00793.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738526|gb|ABG00796.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738530|gb|ABG00798.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738537|gb|ABG00801.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738539|gb|ABG00802.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738545|gb|ABG00805.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738551|gb|ABG00808.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 241/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|108738448|gb|ABG00757.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 241/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|108738560|gb|ABG00812.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 231/541 (42%), Gaps = 125/541 (23%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L
Sbjct: 54  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +     +   K L++L L GCS+L  LP+                      +I  ++++ 
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPE----------------------NIGAMTSLK 151

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ---PSSEL 264
           ELL+     ++N+  SI +LQ LE + +  C   +  E+P C I   +S E+     + L
Sbjct: 152 ELLLDGTA-IKNLPESINRLQNLEILSLRGC---KIQELPLC-IGTLKSLEKLYLDDTAL 206

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
           K        +LPS     K+L  L ++ C +  ++PD +  L++L +L I+G+A+ ELP 
Sbjct: 207 K--------NLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPL 258

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFK-----------------------LKSVESIEI 361
               L  L      +C  L+ + SSI +                       L  +  +E+
Sbjct: 259 KPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELEL 318

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            NC  LK  P+       +   N++GS IE +P    KL K                L  
Sbjct: 319 RNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEK----------------LVE 362

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                 
Sbjct: 363 LRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS----------------- 405

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLE 530
                 +L  LE++  K   R+ +            + GT+      EVP S  +L  LE
Sbjct: 406 ------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLE 448

Query: 531 WLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRI 588
            L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R+
Sbjct: 449 ELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRL 508

Query: 589 P 589
           P
Sbjct: 509 P 509



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 197/459 (42%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D         S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYILNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
            [Cucumis sativus]
          Length = 1195

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 220/494 (44%), Gaps = 81/494 (16%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYF---EWHQFPLKTLNI 61
            N  + +    F  M  LRLL         ++ +   +P    +Y    +W ++   ++  
Sbjct: 553  NGSLIVEAEAFRNMENLRLL---------ILQNAAKLPTNIFKYLPNIKWIEYSSSSV-- 601

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQN---------LVSLKRIDLKYSKLLTKLPDLSLAQN 112
              W   +S  + G  V  + + V N            LK +DL Y +LL + PD S A N
Sbjct: 602  -RWYFPISFVVNGGLVGLVINGVSNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALN 660

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNL 171
            LE L L  C  L   H S+  L+KL  LDL+ C++L  LP+S +  K L+ L L GC  L
Sbjct: 661  LEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKL 720

Query: 172  KNLPKMTSC------HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
            K +P +++       HLR    L    I    +  + L  +  L +  CK LE + +S  
Sbjct: 721  KEIPDLSASSNLKELHLRECYHL---RIIHDSAVGRFLDKLVILDLEGCKILERLPTSHL 777

Query: 226  KLQFLESIRIHRC------------PNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKC 269
            K + L+ + +  C             NL+  ++  C    T  K   S +    LKL  C
Sbjct: 778  KFESLKVLNLSYCQNLKEITDFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFC 837

Query: 270  PRPESLPSGQCM-FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
             + E LPS  C+  KSL SL + +C   E+LP+   N+++L  + + GTAIR+LP  +  
Sbjct: 838  HQLEELPS--CLRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLKGTAIRKLPTSIRY 895

Query: 329  LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----------------- 371
            L  L  L L  C+ L  + S I  LKS++ +++  CS L   P                 
Sbjct: 896  LIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGSSLNFPQRSLCSNLT 955

Query: 372  --EIPFCNIDGS----GIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
              ++  CNI  S     +    +++ +LN   +K   LP SL  F SL  LE+ +CK L 
Sbjct: 956  ILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFCCLP-SLKNFTSLRLLELRNCKFLR 1014

Query: 425  ---RLPDELGNLEA 435
               ++P  L  ++A
Sbjct: 1015 NIVKIPHCLKRMDA 1028



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 190/419 (45%), Gaps = 90/419 (21%)

Query: 327  GQLALLSKL---ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN------ 377
            G +A LSKL   +L+ C  LE + SS   LKS+E + +S C  LK  P++   +      
Sbjct: 677  GSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNLKELH 736

Query: 378  ---------IDGSGIERIPSS--VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
                     I  S + R      +L L  C  LE LP+S   F+SL  L +  C+ L+ +
Sbjct: 737  LRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEI 796

Query: 427  PDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
             D       LE   + G   +R + KS+  L  L  LKL  C   E LPS L + KSL S
Sbjct: 797  TD-FSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRL-KSLDS 854

Query: 485  LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
            L + +C    +LP+   N++ L+ + +KGTAIR++P S+  L  LE L+LS   NL  +P
Sbjct: 855  LSLTNCYKIEQLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLP 914

Query: 544  ESLNQLSSLVSLKLSNNNLERIPERLDPL--------------SSLKYLDLFENNLDR-- 587
              ++ L SL  L L      R   RLD L              S+L  LDL   N+    
Sbjct: 915  SEIHLLKSLKELDL------RECSRLDMLPSGSSLNFPQRSLCSNLTILDLQNCNISNSD 968

Query: 588  IPEYLRSFPTS-------------IPS--EFTSLRLSVDLRNC----------------- 615
              E L +F T+             +PS   FTSLRL ++LRNC                 
Sbjct: 969  FLENLSNFCTTLKELNLSGNKFCCLPSLKNFTSLRL-LELRNCKFLRNIVKIPHCLKRMD 1027

Query: 616  ------LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
                  L + P+ +++++   +  Q +    +  + +    +EIPK+  +Q+T S+IS 
Sbjct: 1028 ASGCELLVISPDYIADMM---FRNQDLKLRNF-KRELIVTYSEIPKFCNNQTTESSISF 1082



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 143/329 (43%), Gaps = 61/329 (18%)

Query: 65   ENLVSLKMPGSKVTQ-LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            + LV L + G K+ + L        SLK ++L Y + L ++ D S+A NLEI DL  C S
Sbjct: 756  DKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIASNLEIFDLRGCFS 815

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
            L   H S+  L++L  L LD C  L  LP+ +  K L  L L  C  ++ LP+    +++
Sbjct: 816  LRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRLKSLDSLSLTNCYKIEQLPEFDE-NMK 874

Query: 184  S--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            S   + L G  I +LP+SI+ L  +  L++  C  L ++ S I  L+ L+          
Sbjct: 875  SLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLK---------- 924

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF---KSLTS-LEIIDCPNFE 297
                                 EL L++C R + LPSG  +    +SL S L I+D  N  
Sbjct: 925  ---------------------ELDLRECSRLDMLPSGSSLNFPQRSLCSNLTILDLQNC- 962

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
                 + N   L  L    T ++EL     +   L  L+                  S+ 
Sbjct: 963  ----NISNSDFLENLSNFCTTLKELNLSGNKFCCLPSLK---------------NFTSLR 1003

Query: 358  SIEISNCSNLKGFPEIPFC--NIDGSGIE 384
             +E+ NC  L+   +IP C   +D SG E
Sbjct: 1004 LLELRNCKFLRNIVKIPHCLKRMDASGCE 1032



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 17/179 (9%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           + E P   A L L KL L  C   + +   +     L +L++  C+N  +LP     L+ 
Sbjct: 649 LEETPDFSAALNLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKS 708

Query: 506 LKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESL--NQLSSLVSLKLSN-N 560
           L+VL + G   ++E+P+ L   S+L+ L L +  +L+II +S     L  LV L L    
Sbjct: 709 LEVLNLSGCIKLKEIPD-LSASSNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCK 767

Query: 561 NLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
            LER+P       SLK L+L +  NL  I ++      SI S         DLR C  L
Sbjct: 768 ILERLPTSHLKFESLKVLNLSYCQNLKEITDF------SIASNLEIF----DLRGCFSL 816


>gi|449447737|ref|XP_004141624.1| PREDICTED: uncharacterized protein LOC101204609 [Cucumis sativus]
          Length = 1040

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 150/286 (52%), Gaps = 23/286 (8%)

Query: 18  MTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPG 74
           MT LR+LK         VH  + + +   +LR+  WH +PLKTL +  +  NL+ L++P 
Sbjct: 1   MTNLRVLKLNN------VHLSKEIEYLSDQLRFLNWHGYPLKTLPSNFNPTNLLELELPN 54

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S +  LW   +++ +LK I+L  S+ L+K PD S   NLE L L  C  L + H S+  L
Sbjct: 55  SSIHHLWTASKSMETLKVINLSDSQFLSKTPDFSGVPNLERLVLSGCVELHQLHHSLGNL 114

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVG 192
           N L  LDL  CK LT++P +I  + LK LVL GCSNL + PK++S   HL   L L    
Sbjct: 115 NHLIQLDLRNCKKLTNIPFNISLESLKILVLSGCSNLTHFPKISSNMNHLLE-LHLDETS 173

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           I+ L SSI  L+++  L + +C  L  + S+I  L  L+++ ++ C  L    +P    D
Sbjct: 174 IKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLD--SLPESLGD 231

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            +  ++   +   + + P           F+ LT LEI++C    R
Sbjct: 232 ISSLEKLDITSTCVNQAPMS---------FQLLTKLEILNCQGLSR 268



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 48/296 (16%)

Query: 283 KSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS+ +L++I   D     + PD  G +  L RL++ G   + +L   LG L  L +L+L+
Sbjct: 65  KSMETLKVINLSDSQFLSKTPDFSG-VPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLR 123

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV- 390
           NC +L  I  +I  L+S++ + +S CSNL  FP+I          ++D + I+ + SS+ 
Sbjct: 124 NCKKLTNIPFNI-SLESLKILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIG 182

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                  L L  C+ L  LPS++    SL +L +  C KL+ LP+ LG++ +LE+L +  
Sbjct: 183 HLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITS 242

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFES------LPSRLYVSK----------------- 480
           T + + P S  QL L+KL++  C            P+  +  K                 
Sbjct: 243 TCVNQAPMSF-QL-LTKLEILNCQGLSRKFLHSLFPTWKFTRKFSNYSQGLKVTNWFTFG 300

Query: 481 -SLTSLEIIDCKNF-MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            SL  L + DC  +   LP+++ +L  L++L +      ++PES+  L +L  L L
Sbjct: 301 CSLRILNLSDCNLWDGDLPNDLHSLASLQILHLSKNHFTKLPESICHLVNLRDLFL 356



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 138/338 (40%), Gaps = 82/338 (24%)

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
           G  ++ LP       LL +LEL N S     ++S    KS+E++++ N S+ +   + P 
Sbjct: 32  GYPLKTLPSNFNPTNLL-ELELPNSSIHHLWTAS----KSMETLKVINLSDSQFLSKTP- 85

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG---- 431
              D SG+  +    L L+ C +L  L  SL     L  L++ +CKKL  +P  +     
Sbjct: 86  ---DFSGVPNLER--LVLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNISLESL 140

Query: 432 -------------------NLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFES 471
                              N+  L EL ++ T I+ +  S+  L +L  L LK C+    
Sbjct: 141 KILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLK 200

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE- 530
           LPS +    SL +L +  C     LP+ +G++  L+ L I  T + + P S   L+ LE 
Sbjct: 201 LPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEI 260

Query: 531 -----------------------------------WLV---------LSDNNLQ--IIPE 544
                                              W           LSD NL    +P 
Sbjct: 261 LNCQGLSRKFLHSLFPTWKFTRKFSNYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPN 320

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
            L+ L+SL  L LS N+  ++PE +  L +L+ L L E
Sbjct: 321 DLHSLASLQILHLSKNHFTKLPESICHLVNLRDLFLVE 358



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 21/252 (8%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L L+ C +  ++P    + +SL  L +  C N    P    N+  L  L +D T+I+ L
Sbjct: 119 QLDLRNCKKLTNIPFNISL-ESLKILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVL 177

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
              +G L  L  L LKNC++L  + S+I  L S++++ ++ CS L   PE      D S 
Sbjct: 178 HSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLDSLPE---SLGDISS 234

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER--LPDELGNLEALEELR 440
           +E++  +   +N+       P S   F+ LT LEI++C+ L R  L       +   +  
Sbjct: 235 LEKLDITSTCVNQA------PMS---FQLLTKLEILNCQGLSRKFLHSLFPTWKFTRKFS 285

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFES-LPSRLYVSKSLTSLEIIDC--KNFMRLP 497
               G++         +L  L L  C+ ++  LP+ L+   SL SL+I+     +F +LP
Sbjct: 286 NYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLH---SLASLQILHLSKNHFTKLP 342

Query: 498 DEIGNLEYLKVL 509
           + I +L  L+ L
Sbjct: 343 ESICHLVNLRDL 354



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 18/231 (7%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLE-SLPSS-----LCMFKSLTSLEII---DCKK 422
           ++ F N  G  ++ +PS+    N  + LE  LP+S         KS+ +L++I   D + 
Sbjct: 24  QLRFLNWHGYPLKTLPSN---FNPTNLLELELPNSSIHHLWTASKSMETLKVINLSDSQF 80

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
           L + PD  G +  LE L + G   + ++  SL  L  L +L L+ C    ++P  + + +
Sbjct: 81  LSKTPDFSG-VPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNISL-E 138

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           SL  L +  C N    P    N+ +L  L +  T+I+ +  S+G L+SL  L L +  +L
Sbjct: 139 SLKILVLSGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDL 198

Query: 540 QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             +P ++  L+SL +L L+  + L+ +PE L  +SSL+ LD+    +++ P
Sbjct: 199 LKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITSTCVNQAP 249


>gi|5823587|emb|CAB53785.1| disease resistance protein RPS4-Ler [Arabidopsis thaliana]
          Length = 1217

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           +S++  E  ++   F  M  LR LKF        C + NK  +     +P  E+R   W 
Sbjct: 564 LSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWL 623

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPL+TL N  +  NLV LK+P S+  QLW+  ++   L+ +DL +S  L  L  LS A+
Sbjct: 624 KFPLETLPNDFNPINLVDLKLPYSETEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAE 683

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
            L+ L+L  C++L      ++ +  L  L+L  C SL SLP  ++   LK L L GCS  
Sbjct: 684 KLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLP-EMNLISLKTLTLSGCSTF 742

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K  P ++      TL L G  I +LP +++ L  +  L +  CK LE I   + +L+ L+
Sbjct: 743 KEFPLISDN--IETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQ 800

Query: 232 SIRIHRCPNLQF---LEMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQCM 281
            + +  C NL+    +++   NI   DGT  +  P       L L +  +   LP G   
Sbjct: 801 ELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQ 860

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALN 310
              L  L++  C +   +P+   NLQ L+
Sbjct: 861 LSQLKWLDLKYCTSLTSVPEFPPNLQCLD 889



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 213/477 (44%), Gaps = 73/477 (15%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             E LP++   +  ++ L +  +   +L EG      L  ++L + S+L  +S  + K + 
Sbjct: 627  LETLPNDFNPINLVD-LKLPYSETEQLWEGDKDTPCLRWVDLNHSSKLCSLSG-LSKAEK 684

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            ++ + +  C+ LK FP       D   ++ +  + L L  C+ LESLP    +  SL +L
Sbjct: 685  LQRLNLEGCTTLKAFPH------DMKKMKML--AFLNLKGCTSLESLPEMNLI--SLKTL 734

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
             +  C   +  P    N+E L    ++GT I ++P ++ +L  L  L +K C   E +P 
Sbjct: 735  TLSGCSTFKEFPLISDNIETL---YLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPG 791

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            R+   K+L  L + DC N    P EI ++ +L +L + GTAI  +P    QL S+++L L
Sbjct: 792  RVGELKALQELILSDCLNLKIFP-EI-DISFLNILLLDGTAIEVMP----QLPSVQYLCL 845

Query: 535  SDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY-----LDLFENNLDR 587
            S N  +  +P  ++QLS L  L L    +L  +PE    L  L       L      L R
Sbjct: 846  SRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLAR 905

Query: 588  IPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG--------WMKQSVNGE 639
            I    ++  T I   FT         NC  L+     EI            + ++  NG 
Sbjct: 906  IMPTEQNHSTFI---FT---------NCENLEQAAKEEITSYAQRKCQLLSYARKRYNG- 952

Query: 640  TYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECC 696
              +++S++   FPG E+P WF H++ GS + +K        KL G A C V++C      
Sbjct: 953  GLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVISC------ 1006

Query: 697  RHESVEDDRKCNLFDVVCDRRSEGYDS----YT------SSYLGKISHVESDHVFLG 743
                ++   + +   V C  + +  D     YT      + + G    +E DHVF+G
Sbjct: 1007 ----LDPQDQVSRLSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIG 1059



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 18/203 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   ESLP    +  SL +L +  C  F+  P    N++ L    +DGTAI +LP
Sbjct: 712 LNLKGCTSLESLPEMNLI--SLKTLTLSGCSTFKEFPLISDNIETL---YLDGTAISQLP 766

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--IPFCNI--- 378
             + +L  L  L +K+C  LE I   + +LK+++ + +S+C NLK FPE  I F NI   
Sbjct: 767 MNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEIDISFLNILLL 826

Query: 379 DGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           DG+ IE +P       L L++ +K+  LP  +     L  L++  C  L  +P+   NL+
Sbjct: 827 DGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQ 886

Query: 435 ALEELRVEG-TGIREVPKSLAQL 456
            L+     G + ++ V K LA++
Sbjct: 887 CLD---AHGCSSLKTVSKPLARI 906


>gi|108738541|gb|ABG00803.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 241/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS---------------- 405

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 406 -------NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 69/375 (18%)

Query: 293 CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L+ + CS+L      + 
Sbjct: 63  CHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVS 121

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
            LK +E + +S CS+L                                  LP ++    S
Sbjct: 122 GLKLLEKLFLSGCSDLS--------------------------------VLPENIGAMTS 149

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
           L  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  L +L KL L   ++ +
Sbjct: 150 LKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD-TALK 207

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+A+ E+P     L SL 
Sbjct: 208 NLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLY 267

Query: 531 WLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
                D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L  ++ L+L      R  
Sbjct: 268 DFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELEL------RNC 321

Query: 590 EYLRSFPTSI-------------------PSEFTSLRLSVDLR--NC--LKLDPNELSEI 626
           ++L+  P SI                   P EF  L   V+LR  NC  LK  P    ++
Sbjct: 322 KFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDL 381

Query: 627 --IKDGWMKQSVNGE 639
             +   +MK+++  E
Sbjct: 382 KSLHRLYMKETLVSE 396



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC  +   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFXQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 197/421 (46%), Gaps = 68/421 (16%)

Query: 294  PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
            P    +PD   N++ L +L +DGTAI+E+P  +  L++L +   +NC  LE +  SI +L
Sbjct: 1122 PTLTTMPDTW-NMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRL 1180

Query: 354  KSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLNKCSK 398
            K ++ +  +NCS L  FPE+          ++ G+ I+ +PSS+        L L  C K
Sbjct: 1181 KYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKK 1240

Query: 399  LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK------- 451
            L +LP+ +C  KSL +L +  C KL +LP  LG+L+ LE L     G    P        
Sbjct: 1241 LVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLC 1300

Query: 452  SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
            SL  L L+ L L + S  + +  RLY      SLE++D  N   + D             
Sbjct: 1301 SLRILHLNGLNLMQWSIQDDI-CRLY------SLEVLDLTNCNLIDD------------- 1340

Query: 512  KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE-RIPERLD 570
             GTA     + +  LSSL+ L+LS N++  IP  ++QLS L  L  S+  +   IPE   
Sbjct: 1341 -GTA-----DEIFHLSSLQVLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPEL-- 1392

Query: 571  PLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRN-CLKLDPNELSEIIK 628
              SSL+ +D+     L  +      F  S+   F S    ++  N C    P        
Sbjct: 1393 -PSSLRSIDVHACTGLITLSNPSSLFWASLFKCFKSAIQDLECGNHCYDPSP-------- 1443

Query: 629  DGWMKQSVNGETYITKSMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGYNK-LMGFAFCV 686
            + W      G+     S+  P  + IP+W RHQ  GS ++ + P+    NK L+GFA   
Sbjct: 1444 EAWPDFCYFGQGI---SILIPRSSGIPEWIRHQKNGSRVTTELPRYWYKNKDLLGFALFS 1500

Query: 687  V 687
            V
Sbjct: 1501 V 1501



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 179/395 (45%), Gaps = 90/395 (22%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKN---KCMVHSLEGV----------------PFTELR 47
           ++Q     F  M +LRLLK     N        +L G+                P  ELR
Sbjct: 541 QLQFTTEAFKVMNDLRLLKVHQDANYDSAVKYWTLAGLFEMHLSQVHFCRDFEFPSQELR 600

Query: 48  YFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD 106
           Y  W  +PL++L +  + ENLV L +  S + QLW+  +    LK I+L +SK L K+P+
Sbjct: 601 YLHWDGYPLESLPSNFYAENLVELNLRCSNIKQLWE-TELFKKLKVINLSHSKHLNKIPN 659

Query: 107 LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVL 165
            S   NLEI                        L L+ C +L SLP SI+  + LK L  
Sbjct: 660 PSCVPNLEI------------------------LTLEGCINLESLPRSIYKLRRLKTLCC 695

Query: 166 RGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
            GC NL++ P+ M        L L    I +LPSSI+ L  +  L + +CK L  +  SI
Sbjct: 696 GGCKNLRSFPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSI 755

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
             L            +L+FL    C+              KL+K   PE L S +C+ K 
Sbjct: 756 CNL-----------TSLKFLNFDFCS--------------KLEKL--PEDLKSLKCLQK- 787

Query: 285 LTSLEIIDCPNFERLPDELG--NLQALNRL---IIDGTAIRELPEGLGQLALLSKLELKN 339
              L+ ++C    +LP   G  +L+ LN     ++DG    E+P  + QL+ L +L+L +
Sbjct: 788 -LYLQDLNC----QLPSVSGLCSLKVLNLSECNLMDG----EIPSEVCQLSSLKELDL-S 837

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            +    I +SI +L  ++++ +S+C NL   PE+P
Sbjct: 838 WNHFSSIPASISQLSKLKALGLSHCRNLLQIPELP 872



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 183/407 (44%), Gaps = 63/407 (15%)

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           Q L  L  DG  +  LP       L+ +L L+ CS ++ +  +    K ++ I +S+  +
Sbjct: 597 QELRYLHWDGYPLESLPSNFYAENLV-ELNLR-CSNIKQLWETEL-FKKLKVINLSHSKH 653

Query: 367 LKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           L   P  P C         +P+  +L L  C  LESLP S+   + L +L    CK L  
Sbjct: 654 LNKIPN-PSC---------VPNLEILTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRS 703

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            P+ +G++E L +L ++ T I ++P S+  L  L  L L  C    ++P  +    SL  
Sbjct: 704 FPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKF 763

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR-----------------------EVPE 521
           L    C    +LP+++ +L+ L+ L ++    +                       E+P 
Sbjct: 764 LNFDFCSKLEKLPEDLKSLKCLQKLYLQDLNCQLPSVSGLCSLKVLNLSECNLMDGEIPS 823

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
            + QLSSL+ L LS N+   IP S++QLS L +L LS+  NL +IPE     S+L++LD 
Sbjct: 824 EVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGLSHCRNLLQIPEL---PSTLQFLD- 879

Query: 581 FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
             +N         SF  S  SEF         + C+    +   E +             
Sbjct: 880 -AHNSHFTLSSPSSFLPSSFSEFQDFVCGSSFQLCVCYSYSYFEEGV------------- 925

Query: 641 YITKSMYFPG-NEIPKWFRHQSTGSTISLKTPQPTGYNK-LMGFAFC 685
               S++FPG + IP+W   ++ G+ +++  PQ    +K  +GFA C
Sbjct: 926 ----SIFFPGISGIPEWIMGENMGNHVTIDLPQDWFEDKDFLGFALC 968



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 123/273 (45%), Gaps = 30/273 (10%)

Query: 251  IDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +DGT  KE PSS        E   + C   ESLP   C  K L  L   +C      P+ 
Sbjct: 1141 LDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLGSFPEV 1200

Query: 303  LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            + N+  L  L + GTAI++LP  +  L  L  L+L +C +L  + + I  LKS++++ + 
Sbjct: 1201 MENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVY 1260

Query: 363  NCSNLKGFP---------EIPFCNIDGSGIERIPS-------SVLKLNKCSKLE-SLPSS 405
             CS L   P         E       GS    +PS        +L LN  + ++ S+   
Sbjct: 1261 GCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLRILHLNGLNLMQWSIQDD 1320

Query: 406  LCMFKSLTSLEIIDCKKLER-LPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +C   SL  L++ +C  ++    DE+ +L +L+ L +    I ++P  ++QL+ L  L  
Sbjct: 1321 ICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHISKIPAGISQLSKLQVLGF 1380

Query: 464  KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
              C     +P    +  SL S+++  C   + L
Sbjct: 1381 SHCEMAVEIPE---LPSSLRSIDVHACTGLITL 1410



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 28/288 (9%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENI-SSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           G  +E LPS+     N+ EL +  C  ++ +  + +FK   L+ I +    +L  +  PS
Sbjct: 606 GYPLESLPSNFYA-ENLVELNL-RCSNIKQLWETELFKK--LKVINLSHSKHLNKIPNPS 661

Query: 249 CNIDGTRSKEQPSSE-LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
           C          P+ E L L+ C   ESLP      + L +L    C N    P+ +G+++
Sbjct: 662 C---------VPNLEILTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDME 712

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            L +L +D TAI +LP  +  L  L  L+L NC +L  +  SI  L S++ +    CS L
Sbjct: 713 KLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKL 772

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-RL 426
           +  PE      D   ++ +    L+   C +L S+ S LC   SL  L + +C  ++  +
Sbjct: 773 EKLPE------DLKSLKCLQKLYLQDLNC-QLPSV-SGLC---SLKVLNLSECNLMDGEI 821

Query: 427 PDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
           P E+  L +L+EL +       +P S++QL+ L  L L  C +   +P
Sbjct: 822 PSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGLSHCRNLLQIP 869



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
            L  +P   +      L L G  I+E+PSSI  LS + E    +CK LE++  SI +L++L
Sbjct: 1124 LTTMPDTWNMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYL 1183

Query: 231  ESIRIHRCPNL----QFLE----MPSCNIDGTRSKEQPSS--------ELKLKKCPRPES 274
            + +    C  L    + +E    +   ++ GT  ++ PSS         L L  C +  +
Sbjct: 1184 QVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVT 1243

Query: 275  LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID--GTAIRELPEGLGQLALL 332
            LP+  C  KSL +L +  C    +LP  LG+LQ L  L     G+    LP   G L  L
Sbjct: 1244 LPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSG-LCSL 1302

Query: 333  SKLELKNCSELEY-ISSSIFKLKSVESIEISNCS 365
              L L   + +++ I   I +L S+E ++++NC+
Sbjct: 1303 RILHLNGLNLMQWSIQDDICRLYSLEVLDLTNCN 1336



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 39/295 (13%)

Query: 101  LTKLPDLSLAQNLEILDLGYC--SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HS 157
            LT +PD     N+E L   Y   +++ E  SSI  L+ L       CK+L SLP SI   
Sbjct: 1124 LTTMPD---TWNMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRL 1180

Query: 158  KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
            KYL+ L    CS L + P+ M + +    L L G  I++LPSSI+ L  +  L + SCK+
Sbjct: 1181 KYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKK 1240

Query: 217  LENISSSIFKLQFLESIRIHRCP----------NLQFLEMPSCNIDGTRSKEQPS----- 261
            L  + + I  L+ L+++ ++ C           +LQ LE       G+ +   PS     
Sbjct: 1241 LVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLC 1300

Query: 262  -------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER-LPDELGNLQALNRLI 313
                   + L L +     S+    C   SL  L++ +C   +    DE+ +L +L  L+
Sbjct: 1301 SLRILHLNGLNLMQW----SIQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLL 1356

Query: 314  IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL-KSVESIEISNCSNL 367
            +    I ++P G+ QL+ L  L   +C     ++  I +L  S+ SI++  C+ L
Sbjct: 1357 LSRNHISKIPAGISQLSKLQVLGFSHCE----MAVEIPELPSSLRSIDVHACTGL 1407


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 45/355 (12%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
           T + I+   N E LP E+G LQ L  L +    ++ LP+ +G+L  + +L L N ++L  
Sbjct: 42  TDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSN-NQLTT 100

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           +   I KLK +  ++++N   L   P+      D   ++ +    L  N+   L++LP  
Sbjct: 101 LPKDIGKLKKLRELDLTNNL-LTTLPK------DIGQLQNLRELYLTNNQ---LKTLPKD 150

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL- 463
           +   ++L  L  +D  +L+ LP ++G L+ L EL ++G  ++ +PK + +L  L++L L 
Sbjct: 151 IGQLQNLREL-YLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLT 209

Query: 464 --------KKCSSFESLPSRLYVSKSLTSL--EIIDCKNFM---------RLPDEIGNLE 504
                   K   + ++L   L ++  LT+L  EI   KN            LP++IG L+
Sbjct: 210 NNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLK 269

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L + G  I  +P+ +GQL +L+ L LS+N L  +P+ + QL +L  L LS N +  
Sbjct: 270 SLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITT 329

Query: 565 IPERLDPLSSLKYLDLFENNLDRIP------EYLRSFP------TSIPSEFTSLR 607
           +P+ +  L SL+ L+L  N +  +P      + LR         T+IP E   L+
Sbjct: 330 LPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLK 384



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 183/407 (44%), Gaps = 71/407 (17%)

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
           E LP  I  L N+ EL + S  +L+ +   I KLQ +E + +    N Q   +P      
Sbjct: 53  ETLPKEIGELQNLTELYL-SSNQLKTLPKEIGKLQKIERLSLS---NNQLTTLPK----- 103

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
              K +   EL L       +LP      ++L  L + +    + LP ++G LQ L  L 
Sbjct: 104 DIGKLKKLRELDLTNNLL-TTLPKDIGQLQNLRELYLTNN-QLKTLPKDIGQLQNLRELY 161

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN---------C 364
           +D   ++ LP+ +GQL  L +L L + ++L+ +   I KL+++  + ++N          
Sbjct: 162 LDNNQLKTLPKDIGQLQNLRELNL-DGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDI 220

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
            NLK   E+   N                   ++L +LP  +   K+L  L +     L 
Sbjct: 221 GNLKNLGELLLIN-------------------NELTTLPKEIGKLKNLQVLYL--GALLT 259

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            LP+++G L++L EL + G  I  +PK + QL   ++              LY+S++   
Sbjct: 260 TLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQV--------------LYLSEN--- 302

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
                      LP EIG L+ L+ L + G  I  +P+ +G+L SL  L LS N +  +P+
Sbjct: 303 -------QLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPK 355

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
            + +L SL  L L  N +  IP+ +  L +L+ L      LD IP +
Sbjct: 356 EIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVL-----YLDDIPAW 397



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 151/331 (45%), Gaps = 37/331 (11%)

Query: 43  FTELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
            TEL Y   +Q  LKTL   I   + +  L +  +++T L  D+  L  L+ +DL  + L
Sbjct: 65  LTEL-YLSSNQ--LKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDL-TNNL 120

Query: 101 LTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
           LT LP D+   QNL  L L   + L      I  L  L  L LD  + L +LP  I   +
Sbjct: 121 LTTLPKDIGQLQNLRELYL-TNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIGQLQ 178

Query: 159 YLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
            L+ L L G + LK LPK +      + L L    +  LP  I  L N+GELL+ + + L
Sbjct: 179 NLRELNLDG-NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNE-L 236

Query: 218 ENISSSIFKLQFLESIRIHR----CPN-LQFLE-MPSCNIDGTRSKEQPSSELKLKKCPR 271
             +   I KL+ L+ + +       PN + +L+ +   N+ G +    P    +L+    
Sbjct: 237 TTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNL-- 294

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
                  Q ++ S   L          LP E+G LQ L  L + G  I  LP+ +G+L  
Sbjct: 295 -------QVLYLSENQLAT--------LPKEIGQLQNLRELDLSGNQITTLPKDIGELQS 339

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L +L L + +++  +   I KL+S+  + + 
Sbjct: 340 LRELNL-SGNQITTLPKEIGKLQSLRELNLG 369


>gi|240256307|ref|NP_197336.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005159|gb|AED92542.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1245

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 206/461 (44%), Gaps = 55/461 (11%)

Query: 3   KINSEIQINPYTFSKMTELRLLKFC-GSKNK-CMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           +I  +I I+   F  MT L+ L    G  +K  +   L  +P  +LR   W+  PL+   
Sbjct: 558 EIEEKIVIDELVFDGMTNLQFLFVNEGFGDKLSLPRGLNCLP-GKLRVLHWNYCPLRLWP 616

Query: 61  ILHWEN-LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
                N LV L M G+   +LW+ +  L SLKR+DL +SK L ++PDLS A NLE LDL 
Sbjct: 617 SKFSANFLVELVMRGNNFEKLWEKILPLKSLKRMDLSHSKDLKEIPDLSNATNLEELDLS 676

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            CS L E   SI     L+ L L  C  L  LP+SI              +  NL  +  
Sbjct: 677 SCSGLLELTDSIGKATNLKRLKLACCSLLKKLPSSI-------------GDATNLQVLDL 723

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
            H  S         EELP SI  L+N+  L +  C +L  + +SI K   L  + +  C 
Sbjct: 724 FHCES--------FEELPKSIGKLTNLKVLELMRCYKLVTLPNSI-KTPKLPVLSMSECE 774

Query: 240 NLQFLEMPSCNIDGTRSKEQPS-----SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           +LQ         D T+ K  P       EL L+     E++PS  C +  L  L++ +C 
Sbjct: 775 DLQAFPTYINLEDCTQLKMFPEISTNVKELDLRNTA-IENVPSSICSWSCLYRLDMSECR 833

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           N +  P+   ++  L+   +  T I E+P  +  L LL  L +  C  L  IS +I KLK
Sbjct: 834 NLKEFPNVPVSIVELD---LSKTEIEEVPSWIENLLLLRTLTMVGCKRLNIISPNISKLK 890

Query: 355 SVESIEI------SNCSNLKGFPEIPFCNIDGSGIER-----------IPSSVLKLNKCS 397
           ++E +E+       + ++   F E  F +     +E            +P   + L   S
Sbjct: 891 NLEDLELFTDGVSGDAASFYAFVE--FSDRHDWTLESDFQVHYILPICLPKMAISLRFWS 948

Query: 398 -KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
              E++P  +     L+ L++  C+ L  LP   G+L +L+
Sbjct: 949 YDFETIPDCINCLPGLSELDVSGCRNLVSLPQLPGSLLSLD 989



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 149/680 (21%), Positives = 279/680 (41%), Gaps = 154/680 (22%)

Query: 135  NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS---------NLKNLPKMTSCHLRST 185
             KL VL  + C  L   P+   + +L  LV+RG +          LK+L +M   H +  
Sbjct: 600  GKLRVLHWNYC-PLRLWPSKFSANFLVELVMRGNNFEKLWEKILPLKSLKRMDLSHSKD- 657

Query: 186  LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                   ++E+P  +   +N+ EL + SC  L  ++ SI K             NL+ L+
Sbjct: 658  -------LKEIPD-LSNATNLEELDLSSCSGLLELTDSIGK-----------ATNLKRLK 698

Query: 246  MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
            +  C++              LKK      LPS      +L  L++  C +FE        
Sbjct: 699  LACCSL--------------LKK------LPSSIGDATNLQVLDLFHCESFE-------- 730

Query: 306  LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
                           ELP+ +G+L  L  LEL  C +L  + +SI K   +  + +S C 
Sbjct: 731  ---------------ELPKSIGKLTNLKVLELMRCYKLVTLPNSI-KTPKLPVLSMSECE 774

Query: 366  NLKGFPEIPFCNI-DGSGIERIP---SSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDC 420
            +L+ FP   + N+ D + ++  P   ++V +L+ + + +E++PSS+C +  L  L++ +C
Sbjct: 775  DLQAFP--TYINLEDCTQLKMFPEISTNVKELDLRNTAIENVPSSICSWSCLYRLDMSEC 832

Query: 421  KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            + L+  P+                    VP S+ +L LSK      +  E +PS +    
Sbjct: 833  RNLKEFPN--------------------VPVSIVELDLSK------TEIEEVPSWIENLL 866

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL----EWLVLSD 536
             L +L ++ CK    +   I  L+ L+ L +    +     S           +W + SD
Sbjct: 867  LLRTLTMVGCKRLNIISPNISKLKNLEDLELFTDGVSGDAASFYAFVEFSDRHDWTLESD 926

Query: 537  NNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEY 591
              +  I+P  L +++  +SL+  + + E IP+ ++ L  L  LD+       +L ++P  
Sbjct: 927  FQVHYILPICLPKMA--ISLRFWSYDFETIPDCINCLPGLSELDVSGCRNLVSLPQLPGS 984

Query: 592  LRSFPTS-------IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK 644
            L S   +       I   F +  + ++  NC+ L+  E  ++I           +T   +
Sbjct: 985  LLSLDANNCESLERINGSFQNPEICLNFANCINLN-QEARKLI-----------QTSACE 1032

Query: 645  SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDD 704
                PG E+P  F  Q T  ++++     T  ++L  +  C++++        + ++ED+
Sbjct: 1033 YAILPGAEVPAHFTDQDTSGSLTINITTKTLPSRLR-YKACILLSKG------NINLEDE 1085

Query: 705  RKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDE------ 758
             + +   V C    +       S    +    +DH+++    F+       + E      
Sbjct: 1086 DEDSFMSVSCHVTGKQNILILPS---PVLRGYTDHLYIFDYSFSLHEDFPEAKEATFSEL 1142

Query: 759  -FFFHIDRSCCEVKKCGIHF 777
             F F +      VK CG+H 
Sbjct: 1143 MFDFIVHTKSWNVKSCGVHL 1162



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 33/312 (10%)

Query: 274 SLPSG-QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           SLP G  C+   L  L    CP   RL     +   L  L++ G    +L E +  L  L
Sbjct: 590 SLPRGLNCLPGKLRVLHWNYCP--LRLWPSKFSANFLVELVMRGNNFEKLWEKILPLKSL 647

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
            +++L +  +L+ I   +    ++E +++S+CS   G  E+       + ++R     LK
Sbjct: 648 KRMDLSHSKDLKEIPD-LSNATNLEELDLSSCS---GLLELTDSIGKATNLKR-----LK 698

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG---NLEALEELRVEGTGIREV 449
           L  CS L+ LPSS+    +L  L++  C+  E LP  +G   NL+ LE +R     +  +
Sbjct: 699 LACCSLLKKLPSSIGDATNLQVLDLFHCESFEELPKSIGKLTNLKVLELMRC--YKLVTL 756

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S+    L  L + +C   ++ P         T + + DC      P+   N   +K L
Sbjct: 757 PNSIKTPKLPVLSMSECEDLQAFP---------TYINLEDCTQLKMFPEISTN---VKEL 804

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
            ++ TAI  VP S+   S L  L +S+  NL+  P   N   S+V L LS   +E +P  
Sbjct: 805 DLRNTAIENVPSSICSWSCLYRLDMSECRNLKEFP---NVPVSIVELDLSKTEIEEVPSW 861

Query: 569 LDPLSSLKYLDL 580
           ++ L  L+ L +
Sbjct: 862 IENLLLLRTLTM 873


>gi|424843897|ref|ZP_18268522.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395322095|gb|EJF55016.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 736

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 261/586 (44%), Gaps = 132/586 (22%)

Query: 85  QNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
           Q  + L  I +K S+L  ++  L   +NL IL L Y   L + H ++  L KLE L    
Sbjct: 140 QEQIELLNISIKNSRLHREIGQL---KNLRILSLTY-GRLQQLHKALGQLTKLEEL---- 191

Query: 145 CKSLT---------SLPTSIHSKYL------------------KRLVL--RGCSNLK--- 172
           C S           +L   +H+ YL                  KRL L  R C+ L    
Sbjct: 192 CLSFNMFHNIPEELALAPKLHTLYLDQSPIDSLPDDLSVLSKIKRLSLARRSCTKLAPLA 251

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI---FKLQF 229
            L ++ + +L  T P     IE  P + + L+ + EL         N+ +S+     L F
Sbjct: 252 QLKQLKALNLEYTNPYKYRQIEHHPKAFEALAQLSEL------EYLNLGASVEDSISLDF 305

Query: 230 LESIRIHRCPNLQFL------------EMPSCNIDGTRSKEQPSSELKL----------- 266
           L  ++  R  NL  +            ++    +D T  +    +  KL           
Sbjct: 306 LIPLQQLRYLNLSSIKSKKILADSLWPQLEQLILDKTNLQWDNQAWKKLFYFSANAGYTP 365

Query: 267 KKCPRP--ESLP----------------SGQCM--FKSLTSLEIIDCPNFERLPDELGNL 306
           KK P+   E LP                  Q +  FK L  L++ +    E LP++ G L
Sbjct: 366 KKLPKAAIEKLPHQLLILELQSRIFSSQDAQALSQFKDLEYLDL-EQSQIEALPEDFGQL 424

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
             L +L +D   ++ LP   GQL +LS L+L   ++L+ + ++ ++L+ ++         
Sbjct: 425 SKLCQLNLDQCQLKRLPSSFGQLQMLSGLQLSK-NQLKELPANFYELQKLQ--------- 474

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
                   + N++G+                +L SL   +  FK L  L I+   +L+ L
Sbjct: 475 --------YLNLEGN----------------QLSSLAPEIGQFKELKLL-ILAHNQLKEL 509

Query: 427 PDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS--FESLPSRLYVSKSLTS 484
           P  + N + +  L ++   +R++  +L ++   +L L   S    ++LPS ++ +K L  
Sbjct: 510 PSTISNCKKITYLNIQDNLVRQIQFNLEKM--KQLTLLNLSDNLLQALPSSIFQAKKLQF 567

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L++ + ++  +L  +IG L+ LK L +   +I+++PE++GQL+ L+ L LS+N LQ +P 
Sbjct: 568 LQLDNNRDLQQLSPKIGQLQNLKTLWLNHCSIQKIPENIGQLTQLQELYLSNNQLQDLPI 627

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           ++ QL+ L  L L+NN L+ +PE +  L +LK L L  N L  +P+
Sbjct: 628 TIGQLTQLQKLHLNNNQLQSLPENIGQLKALKTLTLNNNQLKSLPK 673



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 54/350 (15%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL--KNCSELEYISSSIFKL 353
           F  +P+EL     L+ L +D + I  LP+ L  L+ + +L L  ++C++L    + + +L
Sbjct: 198 FHNIPEELALAPKLHTLYLDQSPIDSLPDDLSVLSKIKRLSLARRSCTKL----APLAQL 253

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE------SLPSSLC 407
           K ++++ +   +  K              IE  P +   L + S+LE      S+  S+ 
Sbjct: 254 KQLKALNLEYTNPYKY-----------RQIEHHPKAFEALAQLSELEYLNLGASVEDSIS 302

Query: 408 M-----FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR---EVPKSL----AQ 455
           +      + L  L +   K  + L D L     LE+L ++ T ++   +  K L    A 
Sbjct: 303 LDFLIPLQQLRYLNLSSIKSKKILADSLW--PQLEQLILDKTNLQWDNQAWKKLFYFSAN 360

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
              +  KL K ++ E LP +L + + L S  I   ++   L  +  +LEYL    ++ + 
Sbjct: 361 AGYTPKKLPK-AAIEKLPHQLLILE-LQS-RIFSSQDAQAL-SQFKDLEYL---DLEQSQ 413

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           I  +PE  GQLS L  L L    L+ +P S  QL  L  L+LS N L+ +P     L  L
Sbjct: 414 IEALPEDFGQLSKLCQLNLDQCQLKRLPSSFGQLQMLSGLQLSKNQLKELPANFYELQKL 473

Query: 576 KYLDLFENNLDRI-PEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
           +YL+L  N L  + PE           +F  L+L +   N LK  P+ +S
Sbjct: 474 QYLNLEGNQLSSLAPEI---------GQFKELKLLILAHNQLKELPSTIS 514



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 40/314 (12%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           IE LP     LS + +L +  C +L+ + SS  +LQ L  +++ +               
Sbjct: 414 IEALPEDFGQLSKLCQLNLDQC-QLKRLPSSFGQLQMLSGLQLSK--------------- 457

Query: 253 GTRSKEQPSSELKLKKCP-------RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
             + KE P++  +L+K         +  SL      FK L  L I+     + LP  + N
Sbjct: 458 -NQLKELPANFYELQKLQYLNLEGNQLSSLAPEIGQFKELKLL-ILAHNQLKELPSTISN 515

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            + +  L I    +R++   L ++  L+ L L + + L+ + SSIF+ K ++ +++ N  
Sbjct: 516 CKKITYLNIQDNLVRQIQFNLEKMKQLTLLNLSD-NLLQALPSSIFQAKKLQFLQLDNNR 574

Query: 366 NLKGF-PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           +L+   P+I         ++ +    L LN CS ++ +P ++     L  L  +   +L+
Sbjct: 575 DLQQLSPKI-------GQLQNL--KTLWLNHCS-IQKIPENIGQLTQLQEL-YLSNNQLQ 623

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLT 483
            LP  +G L  L++L +    ++ +P+++ QL AL  L L   +  +SLP  +     LT
Sbjct: 624 DLPITIGQLTQLQKLHLNNNQLQSLPENIGQLKALKTLTLNN-NQLKSLPKSIVQLTLLT 682

Query: 484 SLEIIDCKNFMRLP 497
            LE+ + K F   P
Sbjct: 683 DLELRNNKEFKAFP 696



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 30/325 (9%)

Query: 107 LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
           LS  ++LE LDL   S +         L+KL  L+LD+C+ L  LP+S     +   +  
Sbjct: 398 LSQFKDLEYLDLE-QSQIEALPEDFGQLSKLCQLNLDQCQ-LKRLPSSFGQLQMLSGLQL 455

Query: 167 GCSNLKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
             + LK LP           L L G  +  L   I     + +LLI +  +L+ + S+I 
Sbjct: 456 SKNQLKELPANFYELQKLQYLNLEGNQLSSLAPEIGQFKEL-KLLILAHNQLKELPSTI- 513

Query: 226 KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP--ESLPSGQCMFK 283
                       C  + +L +    +   +   +   +L L        ++LPS     K
Sbjct: 514 ----------SNCKKITYLNIQDNLVRQIQFNLEKMKQLTLLNLSDNLLQALPSSIFQAK 563

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            L  L++ +  + ++L  ++G LQ L  L ++  +I+++PE +GQL  L +L L N ++L
Sbjct: 564 KLQFLQLDNNRDLQQLSPKIGQLQNLKTLWLNHCSIQKIPENIGQLTQLQELYLSN-NQL 622

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
           + +  +I +L  ++ + ++N + L+  PE          I ++ +   L LN  ++L+SL
Sbjct: 623 QDLPITIGQLTQLQKLHLNN-NQLQSLPE---------NIGQLKALKTLTLNN-NQLKSL 671

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLP 427
           P S+     LT LE+ + K+ +  P
Sbjct: 672 PKSIVQLTLLTDLELRNNKEFKAFP 696



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 2/124 (1%)

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
           +L  +  ++ S    LPS+L   + +  L I   KN  RL  EIG L+ L++L++    +
Sbjct: 118 SLGPVDYREISFLLGLPSQLLEQEQIELLNI-SIKN-SRLHREIGQLKNLRILSLTYGRL 175

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
           +++ ++LGQL+ LE L LS N    IPE L     L +L L  + ++ +P+ L  LS +K
Sbjct: 176 QQLHKALGQLTKLEELCLSFNMFHNIPEELALAPKLHTLYLDQSPIDSLPDDLSVLSKIK 235

Query: 577 YLDL 580
            L L
Sbjct: 236 RLSL 239



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 8/144 (5%)

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
           + +KSL  ++  +    + LP ++   E +++L I     R +   +GQL +L  L L+ 
Sbjct: 114 FSAKSLGPVDYREISFLLGLPSQLLEQEQIELLNISIKNSR-LHREIGQLKNLRILSLTY 172

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
             LQ + ++L QL+ L  L LS N    IPE L     L  L L ++ +D +P+ L    
Sbjct: 173 GRLQQLHKALGQLTKLEELCLSFNMFHNIPEELALAPKLHTLYLDQSPIDSLPDDL---- 228

Query: 597 TSIPSEFTSLRLSVDLRNCLKLDP 620
            S+ S+    RLS+  R+C KL P
Sbjct: 229 -SVLSKIK--RLSLARRSCTKLAP 249


>gi|108740397|gb|ABG01554.1| disease resistance protein [Arabidopsis thaliana]
          Length = 405

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS----------------- 479
           L + G + + E+P S+   + L KL L++C+    LPS +  +                 
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLEL 193

Query: 480 -------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
                   +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 174/380 (45%), Gaps = 46/380 (12%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILH 63
           + E  +N   FS MT L++L+     N  +   LE +  ++LR   WH +P + L +   
Sbjct: 564 HGESHLNTKFFSAMTGLKVLRV---HNVFLSGDLEYLS-SKLRLLSWHGYPFRNLPSDFQ 619

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
              L+ L +  S +   W + + L  LK I+L  SK L K PDLS   NLE L L  C  
Sbjct: 620 PNELLELNLQNSCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCIR 679

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHL 182
           L E H S+  L  L  LDL  CKSL S+ ++I  + LK L+L GCS L+N P++  +  L
Sbjct: 680 LQELHLSVGILKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKL 739

Query: 183 RSTLPLLGVGIEE------------------------LPSSIKCLSNIGELLIYSCKRLE 218
            + L L G  I +                        LP++I CL++I  L +  C +L+
Sbjct: 740 LTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLD 799

Query: 219 NISSSIFKLQFLESIRI------HRCPNLQFL-EMPSCNIDGTRSKEQPSSELKLKKCPR 271
            I  S+  +  L+ + +      H   +L+ L  + + N  G  S++   S   L   PR
Sbjct: 800 QIPDSLGNISCLKKLDVSGTSISHIPLSLRLLTNLKALNCKGL-SRKLCHSLFPLWSTPR 858

Query: 272 PESLPSG-----QCM--FKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELP 323
             +  S       C   F S+  L   DC   +  +PD+L  L +L+ L +       LP
Sbjct: 859 NNNSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLP 918

Query: 324 EGLGQLALLSKLELKNCSEL 343
             LGQL  L  L L NCS L
Sbjct: 919 NSLGQLINLRCLVLDNCSRL 938



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 163/362 (45%), Gaps = 63/362 (17%)

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLI-IDGTAIRELPEGLGQLALLSKLELKN 339
            F ++T L+++   N   L  +L  L +  RL+   G   R LP       LL +L L+N
Sbjct: 573 FFSAMTGLKVLRVHNV-FLSGDLEYLSSKLRLLSWHGYPFRNLPSDFQPNELL-ELNLQN 630

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            S +E       KL  ++ I +SN   L   P++         +ER     L LN C +L
Sbjct: 631 -SCIENFWRETEKLDKLKVINLSNSKFLLKTPDLSTV----PNLER-----LVLNGCIRL 680

Query: 400 ESLPSSLCMFKSLTSLEIIDCK-----------------------KLERLPDELGNLEAL 436
           + L  S+ + K L  L++ DCK                       +LE  P+ +GN++ L
Sbjct: 681 QELHLSVGILKHLIFLDLKDCKSLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLL 740

Query: 437 EELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            EL ++GT IR++  S+ +L +L  L L+ C +  +LP+ +    S+  L +  C    +
Sbjct: 741 TELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQ 800

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE------------------WLVLSDN 537
           +PD +GN+  LK L + GT+I  +P SL  L++L+                  W    +N
Sbjct: 801 IPDSLGNISCLKKLDVSGTSISHIPLSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRNN 860

Query: 538 N-----LQIIPESLNQLSSLVSLKLSNNNLE--RIPERLDPLSSLKYLDLFENNLDRIPE 590
           N     L++I    +   S+  L  S+  L    IP+ L  LSSL +LDL  N    +P 
Sbjct: 861 NSHSFGLRLIT-CFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPN 919

Query: 591 YL 592
            L
Sbjct: 920 SL 921



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 114/260 (43%), Gaps = 49/260 (18%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGTAIR 320
           L LK C   +S+    C   SL SL+I+    C   E  P+ +GN++ L  L +DGTAIR
Sbjct: 696 LDLKDCKSLKSI----CSNISLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIR 751

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------I 373
           +L   +G+L  L  L+L+NC  L  + ++I  L S++ + +  CS L   P+       +
Sbjct: 752 KLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCL 811

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKL--ESLPSSLCM----------------------- 408
              ++ G+ I  IP S+  L     L  + L   LC                        
Sbjct: 812 KKLDVSGTSISHIPLSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRNNNSHSFGLRLIT 871

Query: 409 ----FKSLTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
               F S+  L   DCK  +  +PD+L  L +L  L +       +P SL QL  L  L 
Sbjct: 872 CFSNFHSVKVLNFSDCKLADGDIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLV 931

Query: 463 LKKCSSFESLP----SRLYV 478
           L  CS   SLP    S LYV
Sbjct: 932 LDNCSRLRSLPKFPVSLLYV 951


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 220/494 (44%), Gaps = 81/494 (16%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYF---EWHQFPLKTLNI 61
            N  + +    F  M  LRLL         ++ +   +P    +Y    +W ++   ++  
Sbjct: 553  NGSLIVEAEAFRNMENLRLL---------ILQNAAKLPTNIFKYLPNIKWIEYSSSSV-- 601

Query: 62   LHWENLVSLKMPGSKVTQLWDDVQN---------LVSLKRIDLKYSKLLTKLPDLSLAQN 112
              W   +S  + G  V  + + V N            LK +DL Y +LL + PD S A N
Sbjct: 602  -RWYFPISFVVNGGLVGLVINGVSNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALN 660

Query: 113  LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNL 171
            LE L L  C  L   H S+  L+KL  LDL+ C++L  LP+S +  K L+ L L GC  L
Sbjct: 661  LEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKL 720

Query: 172  KNLPKMTSC------HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
            K +P +++       HLR    L    I    +  + L  +  L +  CK LE + +S  
Sbjct: 721  KEIPDLSASSNLKELHLRECYHL---RIIHDSAVGRFLDKLVILDLEGCKILERLPTSHL 777

Query: 226  KLQFLESIRIHRC------------PNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKC 269
            K + L+ + +  C             NL+  ++  C    T  K   S +    LKL  C
Sbjct: 778  KFESLKVLNLSYCQNLKEITDFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFC 837

Query: 270  PRPESLPSGQCM-FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
             + E LPS  C+  KSL SL + +C   E+LP+   N+++L  + + GTAIR+LP  +  
Sbjct: 838  HQLEELPS--CLRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLKGTAIRKLPTSIRY 895

Query: 329  LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----------------- 371
            L  L  L L  C+ L  + S I  LKS++ +++  CS L   P                 
Sbjct: 896  LIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGSSLNFPQRSLCSNLT 955

Query: 372  --EIPFCNIDGS----GIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
              ++  CNI  S     +    +++ +LN   +K   LP SL  F SL  LE+ +CK L 
Sbjct: 956  ILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFCCLP-SLKNFTSLRLLELRNCKFLR 1014

Query: 425  ---RLPDELGNLEA 435
               ++P  L  ++A
Sbjct: 1015 NIVKIPHCLKRMDA 1028



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 190/419 (45%), Gaps = 90/419 (21%)

Query: 327  GQLALLSKL---ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN------ 377
            G +A LSKL   +L+ C  LE + SS   LKS+E + +S C  LK  P++   +      
Sbjct: 677  GSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNLKELH 736

Query: 378  ---------IDGSGIERIPSS--VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
                     I  S + R      +L L  C  LE LP+S   F+SL  L +  C+ L+ +
Sbjct: 737  LRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEI 796

Query: 427  PDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
             D       LE   + G   +R + KS+  L  L  LKL  C   E LPS L + KSL S
Sbjct: 797  TD-FSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRL-KSLDS 854

Query: 485  LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIP 543
            L + +C    +LP+   N++ L+ + +KGTAIR++P S+  L  LE L+LS   NL  +P
Sbjct: 855  LSLTNCYKIEQLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLP 914

Query: 544  ESLNQLSSLVSLKLSNNNLERIPERLDPL--------------SSLKYLDLFENNLDR-- 587
              ++ L SL  L L      R   RLD L              S+L  LDL   N+    
Sbjct: 915  SEIHLLKSLKELDL------RECSRLDMLPSGSSLNFPQRSLCSNLTILDLQNCNISNSD 968

Query: 588  IPEYLRSFPTS-------------IPS--EFTSLRLSVDLRNC----------------- 615
              E L +F T+             +PS   FTSLRL ++LRNC                 
Sbjct: 969  FLENLSNFCTTLKELNLSGNKFCCLPSLKNFTSLRL-LELRNCKFLRNIVKIPHCLKRMD 1027

Query: 616  ------LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
                  L + P+ +++++   +  Q +    +  + +    +EIPK+  +Q+T S+IS 
Sbjct: 1028 ASGCELLVISPDYIADMM---FRNQDLKLRNF-KRELIVTYSEIPKFCNNQTTESSISF 1082



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 143/329 (43%), Gaps = 61/329 (18%)

Query: 65   ENLVSLKMPGSKVTQ-LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            + LV L + G K+ + L        SLK ++L Y + L ++ D S+A NLEI DL  C S
Sbjct: 756  DKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIASNLEIFDLRGCFS 815

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
            L   H S+  L++L  L LD C  L  LP+ +  K L  L L  C  ++ LP+    +++
Sbjct: 816  LRTIHKSVGSLDQLIALKLDFCHQLEELPSCLRLKSLDSLSLTNCYKIEQLPEFDE-NMK 874

Query: 184  S--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            S   + L G  I +LP+SI+ L  +  L++  C  L ++ S I  L+ L+          
Sbjct: 875  SLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLK---------- 924

Query: 242  QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF---KSLTS-LEIIDCPNFE 297
                                 EL L++C R + LPSG  +    +SL S L I+D  N  
Sbjct: 925  ---------------------ELDLRECSRLDMLPSGSSLNFPQRSLCSNLTILDLQNC- 962

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
                 + N   L  L    T ++EL     +   L  L+                  S+ 
Sbjct: 963  ----NISNSDFLENLSNFCTTLKELNLSGNKFCCLPSLK---------------NFTSLR 1003

Query: 358  SIEISNCSNLKGFPEIPFC--NIDGSGIE 384
             +E+ NC  L+   +IP C   +D SG E
Sbjct: 1004 LLELRNCKFLRNIVKIPHCLKRMDASGCE 1032



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 17/179 (9%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           + E P   A L L KL L  C   + +   +     L +L++  C+N  +LP     L+ 
Sbjct: 649 LEETPDFSAALNLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKS 708

Query: 506 LKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESL--NQLSSLVSLKLSN-N 560
           L+VL + G   ++E+P+ L   S+L+ L L +  +L+II +S     L  LV L L    
Sbjct: 709 LEVLNLSGCIKLKEIPD-LSASSNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCK 767

Query: 561 NLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
            LER+P       SLK L+L +  NL  I ++      SI S         DLR C  L
Sbjct: 768 ILERLPTSHLKFESLKVLNLSYCQNLKEITDF------SIASNLEIF----DLRGCFSL 816


>gi|242069265|ref|XP_002449909.1| hypothetical protein SORBIDRAFT_05g025470 [Sorghum bicolor]
 gi|241935752|gb|EES08897.1| hypothetical protein SORBIDRAFT_05g025470 [Sorghum bicolor]
          Length = 1219

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 191/414 (46%), Gaps = 69/414 (16%)

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
           E LP  I  LS +  L I    ++  +  SI KL  L+ + +  C N+  L         
Sbjct: 403 ESLPECITELSKLQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNISKL--------- 453

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
                             PES    +CM      L++  C     LPD LGNL  L  L 
Sbjct: 454 ------------------PESFGDLKCM----VILDMSGCTGITELPDSLGNLTNLQLLQ 491

Query: 314 IDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           + G + ++ +PE L  L  L  L L  C  L+ +  +I  L  ++ + +S+CS +   PE
Sbjct: 492 LSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQLPKTIGMLGCLKYLSLSSCSGMSKLPE 551

Query: 373 ------------IPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSL 412
                       +P C    +GI  +P S+        L+L+ CS L+++P SLC    L
Sbjct: 552 SFGDLKCMVHLDMPNC----AGIMELPDSLGNLMNLQYLQLSGCSNLKAIPESLCTLTKL 607

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLA-LSKLKLKKCSSFE 470
             L +  C  L+R+P+ +GNL AL+ L +     IRE+P+SL +L  L  L L +C  F 
Sbjct: 608 QYLNLSSCFFLDRIPEAIGNLIALKYLNMSSCDKIRELPESLMKLQNLLHLDLSRCRGFR 667

Query: 471 SLPSRLYVSKSLTSLEIIDCK-----NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
                L     LT+L+ +D       +   L D + NL  LK L +  + I  +PES+G 
Sbjct: 668 K--GSLGALCGLTTLQHLDMSQLRSIDLEDLSDVLENLTKLKYLRL--SLIDSLPESIGN 723

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
           L++LE L LS N L  +P+S+  L  L +L LS    L+ +PE +  L  LKYL
Sbjct: 724 LTNLEHLDLSGNCLPCLPQSIGNLKRLHTLDLSYCFGLKSLPESIGAL-GLKYL 776



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 15/323 (4%)

Query: 264 LKLKKCPRPESLPSGQCMF-KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           L+      P  +P+G   F K L +L   +C     LP  +G L+ L  LI        L
Sbjct: 347 LRFSHSGEPLDIPNGAFSFAKYLRTLNFSECSGI-LLPASIGKLKQLRCLIAPRMQNESL 405

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           PE + +L+ L  L +   S++  +  SI KL  ++ + +S CSN+   PE  F ++    
Sbjct: 406 PECITELSKLQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNISKLPE-SFGDLKCMV 464

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           I       L ++ C+ +  LP SL    +L  L++  C  L+ +P+ L  L  L+ L + 
Sbjct: 465 I-------LDMSGCTGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLS 517

Query: 443 G-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
               + ++PK++  L  L  L L  CS    LP      K +  L++ +C   M LPD +
Sbjct: 518 FCRNLDQLPKTIGMLGCLKYLSLSSCSGMSKLPESFGDLKCMVHLDMPNCAGIMELPDSL 577

Query: 501 GNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLS 558
           GNL  L+ L + G + ++ +PESL  L+ L++L LS    L  IPE++  L +L  L +S
Sbjct: 578 GNLMNLQYLQLSGCSNLKAIPESLCTLTKLQYLNLSSCFFLDRIPEAIGNLIALKYLNMS 637

Query: 559 N-NNLERIPERLDPLSSLKYLDL 580
           + + +  +PE L  L +L +LDL
Sbjct: 638 SCDKIRELPESLMKLQNLLHLDL 660



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 210/463 (45%), Gaps = 63/463 (13%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
           I  L+KL+ L+++    +++LP SI     LK L + GCSN+  LP+          L +
Sbjct: 409 ITELSKLQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMVILDM 468

Query: 189 LG-VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
            G  GI ELP S+  L+N+  L +  C  L+ I  S++ L  L+ + +  C NL      
Sbjct: 469 SGCTGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNL------ 522

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
                                    + LP    M   L  L +  C    +LP+  G+L+
Sbjct: 523 -------------------------DQLPKTIGMLGCLKYLSLSSCSGMSKLPESFGDLK 557

Query: 308 ALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
            +  L +   A I ELP+ LG L  L  L+L  CS L+ I  S+  L  ++ + +S+C  
Sbjct: 558 CMVHLDMPNCAGIMELPDSLGNLMNLQYLQLSGCSNLKAIPESLCTLTKLQYLNLSSCFF 617

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L   PE    N+       I    L ++ C K+  LP SL   ++L  L++  C+   + 
Sbjct: 618 LDRIPE-AIGNL-------IALKYLNMSSCDKIRELPESLMKLQNLLHLDLSRCRGFRK- 668

Query: 427 PDELGNLEALEELR-VEGTGIREVP-KSLAQL--ALSKLKLKKCSSFESLPSRLYVSKSL 482
              LG L  L  L+ ++ + +R +  + L+ +   L+KLK  + S  +SLP  +    +L
Sbjct: 669 -GSLGALCGLTTLQHLDMSQLRSIDLEDLSDVLENLTKLKYLRLSLIDSLPESI---GNL 724

Query: 483 TSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSDNNL 539
           T+LE +D        LP  IGNL+ L  L +     ++ +PES+G L  L++L L+    
Sbjct: 725 TNLEHLDLSGNCLPCLPQSIGNLKRLHTLDLSYCFGLKSLPESIGAL-GLKYLWLN---- 779

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
              PE ++  SSLV     +  L     R D +S    L L E
Sbjct: 780 MCSPELIDHASSLVHF---SQTLPFFRVRADDVSGCSNLHLLE 819



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 70/411 (17%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           SK++ L + +  L  LK + +     ++KLP+     + + ILD+  C+ +TE   S+  
Sbjct: 424 SKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMVILDMSGCTGITELPDSLGN 483

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV- 191
           L  L++L L  C +L ++P S++    L+ L L  C NL  LPK        T+ +LG  
Sbjct: 484 LTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQLPK--------TIGMLGCL 535

Query: 192 ---------GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
                    G+ +LP S   L  +  L + +C  +  +  S+  L            NLQ
Sbjct: 536 KYLSLSSCSGMSKLPESFGDLKCMVHLDMPNCAGIMELPDSLGNLM-----------NLQ 584

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
           +L++  C            S LK        ++P   C    L  L +  C   +R+P+ 
Sbjct: 585 YLQLSGC------------SNLK--------AIPESLCTLTKLQYLNLSSCFFLDRIPEA 624

Query: 303 LGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           +GNL AL  L +     IRELPE L +L  L  L+L  C    +   S+  L  + +++ 
Sbjct: 625 IGNLIALKYLNMSSCDKIRELPESLMKLQNLLHLDLSRCR--GFRKGSLGALCGLTTLQH 682

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN--KCSKLESLPSSLCMFKSLTSLEIID 419
            + S L+        +ID   +  +  ++ KL   + S ++SLP S+    +LT+LE +D
Sbjct: 683 LDMSQLR--------SIDLEDLSDVLENLTKLKYLRLSLIDSLPESI---GNLTNLEHLD 731

Query: 420 CKK--LERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCS 467
                L  LP  +GNL+ L  L +    G++ +P+S+  L L  L L  CS
Sbjct: 732 LSGNCLPCLPQSIGNLKRLHTLDLSYCFGLKSLPESIGALGLKYLWLNMCS 782



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 216/525 (41%), Gaps = 87/525 (16%)

Query: 80   LWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDL-GYCSSLTETHSSIQYLNKL 137
            L D ++NL  LK + L    L+  LP+ +    NLE LDL G C  L     SI  L +L
Sbjct: 696  LSDVLENLTKLKYLRLS---LIDSLPESIGNLTNLEHLDLSGNC--LPCLPQSIGNLKRL 750

Query: 138  EVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELP 197
              LDL  C  L SLP SI +  LK L L  CS        +  H   TLP   V  +++ 
Sbjct: 751  HTLDLSYCFGLKSLPESIGALGLKYLWLNMCSPELIDHASSLVHFSQTLPFFRVRADDVS 810

Query: 198  SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR-IHRCPNLQFLEMP-------SC 249
                  SN+          LE + +S  +++ LE++R +     ++ L+         + 
Sbjct: 811  GC----SNL--------HLLERVDASDLRIRSLENVRYLEEANKVKLLDKQILSKLTLTW 858

Query: 250  NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI-----------IDCPNFER 298
             +D  R  E       L++   P  L        S TSL +           + C   E+
Sbjct: 859  TVDAVRLLEDKD---LLEQLMPPRGLNDMHLEGYSSTSLPVWFMGISHHLTNLTCMFLEK 915

Query: 299  LP--------DELGNLQ--ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            LP         +L NL+  +L++L       RE   G G    LS   ++    LE  ++
Sbjct: 916  LPMCSNLPPLGQLPNLEILSLSKLSSIKKIDREFCGGKGAFRRLSNFFIEKMEGLEEWNT 975

Query: 349  SI--------FKLKSVESIEISNCSNLKGFPEIPF---CNIDGSGIERIPSSVLKLNKCS 397
            +         F    ++S+ I  C  L+  P  P    C I  S  +++ SS+ +++K S
Sbjct: 976  TYSVEDGVEEFMFPVLDSLTIQYCPRLRLKPCPPTFHECIIYSS--DQVISSIEEVDKTS 1033

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLE-----------RLPDELG--------NLEALEE 438
               S  S       + S     CK +            +L  E+G        +   L E
Sbjct: 1034 HHCSSSSRAIKLDLIESGH--SCKSIRVCHHCAPSRAVKLDLEIGSESIRLFHHFPLLRE 1091

Query: 439  LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            LR+ G  +  VP+S+ +LA L  L+L+ C    +LP  L    SL SL I  CK+   LP
Sbjct: 1092 LRISGYELTSVPESMRRLASLEMLELEWCDGISALPEWLDELSSLKSLVISGCKSIKSLP 1151

Query: 498  DEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSDNNLQI 541
              I +L  L+ L I+    ++E  ES    + L  + +SD N ++
Sbjct: 1152 PCIQHLTKLQKLHIRNNQQLKEWCESEENKTKLAHINVSDFNAEL 1196


>gi|110741833|dbj|BAE98859.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 660

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 170/614 (27%), Positives = 272/614 (44%), Gaps = 117/614 (19%)

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MT 178
           CS L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ + 
Sbjct: 3   CSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESIN 61

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                  L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC
Sbjct: 62  RLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRC 120

Query: 239 PNL--------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
            +L        +   +    I+G+  +E P          +P SLP       SL     
Sbjct: 121 TSLSKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSA 164

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
            DC   +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI
Sbjct: 165 GDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSI 224

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             + ++ S+                 N++GS IE +P    KL K               
Sbjct: 225 GDMDTLYSL-----------------NLEGSNIEELPEEFGKLEK--------------- 252

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
            L  L + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+ L  L++ K   F
Sbjct: 253 -LVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLF 311

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR---EVPESLGQL 526
               S +      TS E      F+ +P+    L  LK+  +   + R   ++P+ L +L
Sbjct: 312 RISESNV----PGTSEE----PRFVEVPNSFSKL--LKLEELDACSWRISGKIPDDLEKL 361

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNL 585
           S L  L L +N    +P SL +LS+L  L L +   L+R+P     L  L   + F  +L
Sbjct: 362 SCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCF--SL 419

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLK-LDPNELSEI--IKDGWM---------- 632
           + + +          SE T L   ++L NC K +D   L  +  +K  +M          
Sbjct: 420 ESVSDL---------SELTILT-DLNLTNCAKVVDIPGLEHLTALKRLYMTGCNSNYSLA 469

Query: 633 --KQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVAC 690
             K+       + +++  PGN +P WF   S G       P      +L G    VVVA 
Sbjct: 470 VKKRLSKASLKMMRNLSLPGNRVPDWF---SQGPVTFSAQPN----RELRGVIIAVVVAL 522

Query: 691 SVSECCRHESVEDD 704
                  ++  EDD
Sbjct: 523 -------NDETEDD 529



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 207/475 (43%), Gaps = 77/475 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 28  SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 86

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 87  KSLEKLYLDDT-ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 144

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 145 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 204

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 205 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 256

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 257 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 315

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 316 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 373

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L  L + DC++L+RLP                     +P  L QL L
Sbjct: 374 FHSLPSSLVKLSNLQELSLRDCRELKRLP--------------------PLPCKLEQLNL 413

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
           +      C S ES+ S L     LT L + +C   + +P  + +L  LK L + G
Sbjct: 414 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIPG-LEHLTALKRLYMTG 461


>gi|297836995|ref|XP_002886379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332220|gb|EFH62638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 150/303 (49%), Gaps = 23/303 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFTE-LRYFEWHQFPLK 57
           +S IN E+ I+   F +M  LR L+   S+      VH  EG+ F   LR  +W ++P K
Sbjct: 534 ISGIN-EVSISKKAFQRMPNLRFLRVYKSRVDGNDRVHIPEGMEFPHRLRLLDWEEYPRK 592

Query: 58  TLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L+   H E LV L    SK+ +LW+  + L +LK+I+L  S+ L KLPDL+ A NLE L
Sbjct: 593 SLHPTFHPEYLVELNFENSKLEKLWEGREVLTNLKKINLALSRNLKKLPDLTYATNLEEL 652

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
            L  C SL    SS  +L+KL  L ++ C S+  +P  ++   L+++ + GCS+L+N+P 
Sbjct: 653 SLLRCESLEAIPSSFSHLHKLHRLLMNSCISIEVIPAHMNLASLEQVSMAGCSSLRNIPL 712

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           M++    + L +    +E LP+SI   S +  L I   +  + +S          S+R  
Sbjct: 713 MSTN--ITNLYISDTEVEYLPASIGLCSRLEFLHITRNRNFKGLS------HLPTSLRTL 764

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS-----GQCMFKSLTSLEII 291
                    +P C  D  R +      L L +C +  SLP         M +   SLE +
Sbjct: 765 NLRGTDIERIPDCIKDLHRLE-----TLDLSECRKLASLPELPGSLSSLMARDCESLETV 819

Query: 292 DCP 294
            CP
Sbjct: 820 FCP 822



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 44/322 (13%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALEELRVEG 443
           P  +++LN + SKLE L     +  +L  + +   + L++LPD     NLE L  LR E 
Sbjct: 600 PEYLVELNFENSKLEKLWEGREVLTNLKKINLALSRNLKKLPDLTYATNLEELSLLRCES 659

Query: 444 TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
             +  +P S + L  L +L +  C S E +P+ + ++ SL  + +  C +   +P    N
Sbjct: 660 --LEAIPSSFSHLHKLHRLLMNSCISIEVIPAHMNLA-SLEQVSMAGCSSLRNIPLMSTN 716

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQIIPESLNQLSSLVSLKLS 558
           +  L    I  T +  +P S+G  S LE+L ++ N     L  +P      +SL +L L 
Sbjct: 717 ITNL---YISDTEVEYLPASIGLCSRLEFLHITRNRNFKGLSHLP------TSLRTLNLR 767

Query: 559 NNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLR---------- 607
             ++ERIP+ +  L  L+ LDL E   L  +PE   S  + +  +  SL           
Sbjct: 768 GTDIERIPDCIKDLHRLETLDLSECRKLASLPELPGSLSSLMARDCESLETVFCPMNTPN 827

Query: 608 LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTIS 667
             +D  NC KL    L   I+          +++       PG E+P  F H++ G++++
Sbjct: 828 TRIDFTNCFKLCQEALRASIQ----------QSFFLVDALLPGREMPAVFDHRAKGNSLT 877

Query: 668 LKTPQPTGYNKLMGFAFCVVVA 689
           +       Y++   F  CV+ +
Sbjct: 878 IPPNVHRSYSR---FVVCVLFS 896



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 35/173 (20%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS-- 341
           +L  L ++ C + E +P    +L  L+RL+++     E+      LA L ++ +  CS  
Sbjct: 648 NLEELSLLRCESLEAIPSSFSHLHKLHRLLMNSCISIEVIPAHMNLASLEQVSMAGCSSL 707

Query: 342 ------------------ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC----NID 379
                             E+EY+ +SI     +E + I+   N KG   +P      N+ 
Sbjct: 708 RNIPLMSTNITNLYISDTEVEYLPASIGLCSRLEFLHITRNRNFKGLSHLPTSLRTLNLR 767

Query: 380 GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           G+ IERIP  +        L L++C KL SLP    +  SL+SL   DC+ LE
Sbjct: 768 GTDIERIPDCIKDLHRLETLDLSECRKLASLPE---LPGSLSSLMARDCESLE 817



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 33/251 (13%)

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLE 218
           LK++ L    NLK LP +T       L LL    +E +PSS   L  +  LL+ SC  +E
Sbjct: 626 LKKINLALSRNLKKLPDLTYATNLEELSLLRCESLEAIPSSFSHLHKLHRLLMNSCISIE 685

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
            I + +  L  LE + +  C +L+ + + S NI      +              E LP+ 
Sbjct: 686 VIPAHM-NLASLEQVSMAGCSSLRNIPLMSTNITNLYISDT-----------EVEYLPAS 733

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
             +   L  L I    NF+ L     +L+ LN   + GT I  +P+ +  L  L  L+L 
Sbjct: 734 IGLCSRLEFLHITRNRNFKGLSHLPTSLRTLN---LRGTDIERIPDCIKDLHRLETLDLS 790

Query: 339 NCSELEYISSSIFKL-KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
            C +L    +S+ +L  S+ S+   +C +L    E  FC ++       P++ +    C 
Sbjct: 791 ECRKL----ASLPELPGSLSSLMARDCESL----ETVFCPMN------TPNTRIDFTNCF 836

Query: 398 KL--ESLPSSL 406
           KL  E+L +S+
Sbjct: 837 KLCQEALRASI 847


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 246/530 (46%), Gaps = 70/530 (13%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++T L  ++  L +L++++L  ++L     ++   QNL+ L L   + L
Sbjct: 168 QNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTR-NRL 226

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
                 I  L  L++L+L     LT+LP  I + + L+ L L G +    LPK       
Sbjct: 227 ANLPEEIGKLQNLQILNLG-VNQLTTLPKEIGNLQKLQELYL-GDNQFATLPKAIGK--L 282

Query: 184 STLPLLGVGIEEL---PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
             L  L +GI +L   P  I+ L  + +L +YS  RL N+   I KLQ           N
Sbjct: 283 QKLQELDLGINQLTTLPKEIEKLQKLQQLYLYS-NRLANLPEEIEKLQ-----------N 330

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           LQ+L + +  +                      +LP      + L +L + +      LP
Sbjct: 331 LQWLGLNNNQLT---------------------TLPKEIGKLQKLEALHL-ENNQLTTLP 368

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            E+G LQ L  L +    +  LP+ +G+L  L +L L+N ++L  +   I KL++++ + 
Sbjct: 369 KEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLEN-NQLTTLPKEIGKLQNLQELR 427

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES-------LPSSLCMFKSLT 413
           +                 D + +  +P  + KL K  KL S       +P  +   ++L 
Sbjct: 428 L-----------------DYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQ 470

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
           +L +    +L  LP E+GNL+ L+ L +    +  +PK + +L   +L     +   +LP
Sbjct: 471 ALNLY-SNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLP 529

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             +   ++L  L + D +    LP EIGNL+ L+VL +    +  +P+ +G L +L+ L 
Sbjct: 530 KEIGKLQNLQELYLRDNQ-LTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLN 588

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           L+ N L  +PE + +L +L  L L NN L  +PE +  L +LK LDL  N
Sbjct: 589 LNHNRLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELDLVGN 638



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 225/480 (46%), Gaps = 68/480 (14%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP  I  L N+ +L + S  +L  +   I KLQ L+ + + R            N+    
Sbjct: 160 LPKEIGKLQNLRDLDL-SSNQLTILPKEIGKLQNLQKLNLTRNR--------LANLPEEI 210

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
            K Q   EL L +  R  +LP      ++L  L +        LP E+GNLQ L  L + 
Sbjct: 211 GKLQNLQELHLTRN-RLANLPEEIGKLQNLQILNL-GVNQLTTLPKEIGNLQKLQELYLG 268

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--- 372
                 LP+ +G+L  L +L+L   ++L  +   I KL+ ++ + +   + L   PE   
Sbjct: 269 DNQFATLPKAIGKLQKLQELDL-GINQLTTLPKEIEKLQKLQQLYLY-SNRLANLPEEIE 326

Query: 373 ----IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCK 421
               + +  ++ + +  +P  + KL K        ++L +LP  +   ++L  L + +  
Sbjct: 327 KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSN-N 385

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA------------------LSKL-K 462
           +L  LP E+G L+ L+EL +E   +  +PK + +L                   + KL K
Sbjct: 386 QLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQK 445

Query: 463 LKKCSS----FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
           LKK  S    F ++P  ++  ++L +L +   +    LP EIGNL+ L++L +    +  
Sbjct: 446 LKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQ-LTSLPKEIGNLQNLQLLYLSDNQLAT 504

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +P+ +G+L +L+ L LSDN L  +P+ + +L +L  L L +N L  +P+ +  L +L+ L
Sbjct: 505 LPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVL 564

Query: 579 DLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           +L  N L  +P+ + +              T++P E   L+   +L+  L LD N+L+ +
Sbjct: 565 NLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQ---NLQ-LLHLDNNQLTTL 620



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 220/501 (43%), Gaps = 71/501 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L +++  L +L+ + L  ++L     ++   QNL+IL+LG  + L
Sbjct: 191 QNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLG-VNQL 249

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHL 182
           T     I  L KL+ L L   +   +LP +I   + L+ L L G + L  LPK +     
Sbjct: 250 TTLPKEIGNLQKLQELYLGDNQ-FATLPKAIGKLQKLQELDL-GINQLTTLPKEIEKLQK 307

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR-------- 234
              L L    +  LP  I+ L N+ + L  +  +L  +   I KLQ LE++         
Sbjct: 308 LQQLYLYSNRLANLPEEIEKLQNL-QWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTT 366

Query: 235 ----IHRCPNLQFLEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLT 286
               I +  NLQ+L + S N   T  KE    Q   EL L+   +  +LP      ++L 
Sbjct: 367 LPKEIGKLQNLQWLGL-SNNQLTTLPKEIGKLQHLQELHLENN-QLTTLPKEIGKLQNLQ 424

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L + D      LP+E+  LQ L +L   G     +PE +  L  L  L L   ++L  +
Sbjct: 425 ELRL-DYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLY-SNQLTSL 482

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN----- 394
              I  L++++ + +S+ + L   P+       +    +  + +  +P  + KL      
Sbjct: 483 PKEIGNLQNLQLLYLSD-NQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQEL 541

Query: 395 --KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
             + ++L +LP  +   ++L  L + +  +L  LP E+GNL+ L+ L +    +  +P+ 
Sbjct: 542 YLRDNQLTTLPKEIGNLQNLQVLNL-NHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEE 600

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           + +L                       ++L  L  +D      LP+EIG L+ LK L + 
Sbjct: 601 IGKL-----------------------QNLQLLH-LDNNQLTTLPEEIGKLQNLKELDLV 636

Query: 513 GTAIREVPESLGQLSSLEWLV 533
           G      P  +GQ   ++ L+
Sbjct: 637 GN-----PSLIGQKEKIQKLL 652


>gi|296089386|emb|CBI39205.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 162/308 (52%), Gaps = 21/308 (6%)

Query: 7   EIQINPYTFSKMTELRLL----KFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL- 59
           EI+     F+KMT+LR+L    +   ++ +C VH  +   F   ELR   W + PLK L 
Sbjct: 24  EIRFTTAAFAKMTKLRMLIIISECSANQMQCKVHISDDFKFHYDELRLLFWDRCPLKLLP 83

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    +NL+ L MP S +TQLW+  +   +LK I L  SK LT+ PDLS   NL++L+L 
Sbjct: 84  SDFKSKNLLRLCMPNSHLTQLWEGNKIFENLKYIVLNDSKYLTETPDLSRVTNLKLLNLD 143

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C+ L + HSS+  L+KL  L    C +L   P       L+ L+L GCS L+  P ++ 
Sbjct: 144 GCTQLCKIHSSLGDLDKLTELSFKSCINLEHFPDLSQLISLQYLILSGCSKLEKSPVISQ 203

Query: 180 ---CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
              C  R  L L G  I ELPSSI   + +  L + +C++L ++ SSI KL  LE++ + 
Sbjct: 204 HMPCLRR--LCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLS 261

Query: 237 RCPNLQFLEMPSCNIDG---TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            C +L   ++ S N+D    T  +      L+L+ C    SLP+        +S+E+I+ 
Sbjct: 262 GCLDLGKCQVNSGNLDALPQTLDRLCSLRRLELQNCSGLPSLPALP------SSVELINA 315

Query: 294 PNFERLPD 301
            N + L D
Sbjct: 316 SNCKSLED 323



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 44/241 (18%)

Query: 278 GQCMFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDG-TAIRELPEGLGQLALLSK 334
           G  +F++L  + + D       PD   + NL+ LN   +DG T + ++   LG L  L++
Sbjct: 107 GNKIFENLKYIVLNDSKYLTETPDLSRVTNLKLLN---LDGCTQLCKIHSSLGDLDKLTE 163

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--------FCNIDGSGIERI 386
           L  K+C  LE+    + +L S++ + +S CS L+  P I          C +DG+ I  +
Sbjct: 164 LSFKSCINLEHFPD-LSQLISLQYLILSGCSKLEKSPVISQHMPCLRRLC-LDGTAITEL 221

Query: 387 PSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           PSS+        L L  C KL SLPSS+     L +L +  C  L +     GNL+AL  
Sbjct: 222 PSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLSGCLDLGKCQVNSGNLDAL-- 279

Query: 439 LRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
                      P++L +L +L +L+L+ CS   SLP+        +S+E+I+  N   L 
Sbjct: 280 -----------PQTLDRLCSLRRLELQNCSGLPSLPAL------PSSVELINASNCKSLE 322

Query: 498 D 498
           D
Sbjct: 323 D 323



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 22/208 (10%)

Query: 231 ESIRIHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           E+  + R  NL+ L +  C     I  +       +EL  K C   E  P    +  SL 
Sbjct: 127 ETPDLSRVTNLKLLNLDGCTQLCKIHSSLGDLDKLTELSFKSCINLEHFPDLSQLI-SLQ 185

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L +  C   E+ P    ++  L RL +DGTAI ELP  +     L  L+LKNC +L  +
Sbjct: 186 YLILSGCSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSL 245

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSK 398
            SSI KL  +E++ +S C +L        C ++   ++ +P ++        L+L  CS 
Sbjct: 246 PSSISKLTLLETLSLSGCLDLGK------CQVNSGNLDALPQTLDRLCSLRRLELQNCSG 299

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L SLP+   +  S+  +   +CK LE +
Sbjct: 300 LPSLPA---LPSSVELINASNCKSLEDI 324



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 19/206 (9%)

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKK 465
           +F++L  + + D K L   PD L  +  L+ L ++G T + ++  SL  L  L++L  K 
Sbjct: 110 IFENLKYIVLNDSKYLTETPD-LSRVTNLKLLNLDGCTQLCKIHSSLGDLDKLTELSFKS 168

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           C + E  P  L    SL  L +  C    + P    ++  L+ L + GTAI E+P S+  
Sbjct: 169 CINLEHFPD-LSQLISLQYLILSGCSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAY 227

Query: 526 LSSLEWLVLSD-NNLQIIPESLNQLS-----------SLVSLKLSNNNLERIPERLDPLS 573
            + L  L L +   L  +P S+++L+            L   ++++ NL+ +P+ LD L 
Sbjct: 228 ATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLSGCLDLGKCQVNSGNLDALPQTLDRLC 287

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI 599
           SL+ L+L   N   +P  L + P+S+
Sbjct: 288 SLRRLEL--QNCSGLPS-LPALPSSV 310



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +L L+ C++L  + SSL     LT L    C  LE  PD L  L +L+ L + G    E 
Sbjct: 139 LLNLDGCTQLCKIHSSLGDLDKLTELSFKSCINLEHFPD-LSQLISLQYLILSGCSKLEK 197

Query: 450 PKSLAQL--ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
              ++Q    L +L L   ++   LPS +  +  L  L++ +C+  + LP  I  L  L+
Sbjct: 198 SPVISQHMPCLRRLCLDG-TAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLE 256

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
            L++ G         LG+        ++  NL  +P++L++L SL  L+L N
Sbjct: 257 TLSLSGCL------DLGKCQ------VNSGNLDALPQTLDRLCSLRRLELQN 296


>gi|108740475|gb|ABG01593.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS----------------- 479
           L + G + + E+P S+   + L KL L++C+    LPS +  +                 
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLEL 193

Query: 480 -------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
                   +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|108740439|gb|ABG01575.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLAYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLAYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLAYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLAYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 170/345 (49%), Gaps = 37/345 (10%)

Query: 7   EIQINPYTFSKMTELRLLKF---CGSKN-KCMVHSLEGV-PFTE-LRYFEWHQFPLKTL- 59
           ++ I   TF+ +T+LR L+     G K    + H  +G+ PF + LRY EW+ +P K+L 
Sbjct: 538 DLHIQDDTFNLITKLRFLRLHVPLGKKRLTNLYHPDQGIMPFCDKLRYLEWYGYPSKSLP 597

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
                E LV +++P S V  LW  +Q LV+L+ IDL   K L +LPDLS A  L+ L L 
Sbjct: 598 QPFCAELLVEIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELPDLSKATRLKWLFLS 657

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL+E H S  + + L  L LDRCK L +L    H   LK + + GCS+L     ++S
Sbjct: 658 GCESLSEVHPSTFHNDTLVTLLLDRCKKLENLVCEKHLTSLKNIDVNGCSSLIEFS-LSS 716

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             +   L L    ++ L  SI  +SN   L +    RL+N+   +  L+ L  + I  C 
Sbjct: 717 DSIEG-LDLSNTMVKTLHPSIGRMSNFSWLNLQGL-RLQNVPKELSHLRSLTQLWISNCS 774

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFER 298
            +            T+SK +     ++ +C    ESL         L +L + DC N   
Sbjct: 775 VV------------TKSKLE-----EIFECHNGLESL---------LKTLVLKDCCNLFE 808

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           LP  + +L  L  L +DG+ ++ LP  +  L+ L+ L L NC  L
Sbjct: 809 LPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKML 853



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 72/400 (18%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN----IDGSGIERI----PSS--- 389
           S +E++   I +L ++E I+++ C  L   P++        +  SG E +    PS+   
Sbjct: 613 SHVEHLWYGIQELVNLEGIDLTECKQLVELPDLSKATRLKWLFLSGCESLSEVHPSTFHN 672

Query: 390 ----VLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKL------------------- 423
                L L++C KLE+L       K LTSL+ ID   C  L                   
Sbjct: 673 DTLVTLLLDRCKKLENLVCE----KHLTSLKNIDVNGCSSLIEFSLSSDSIEGLDLSNTM 728

Query: 424 -ERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSF------ESLPSR 475
            + L   +G +     L ++G  ++ VPK L+ L +L++L +  CS        E     
Sbjct: 729 VKTLHPSIGRMSNFSWLNLQGLRLQNVPKELSHLRSLTQLWISNCSVVTKSKLEEIFECH 788

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
             +   L +L + DC N   LP  I +L +L  L + G+ ++ +P ++  LS+L   +LS
Sbjct: 789 NGLESLLKTLVLKDCCNLFELPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLT--ILS 846

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            NN +++  SL QL   +  +L   N   + E    +S+LK +    N      E   SF
Sbjct: 847 LNNCKMLV-SLPQLPEHIK-ELRAENCTSLVE----VSTLKTMSKHRNG----DEKYISF 896

Query: 596 PTSIPSEFTSLRLS-VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIP 654
                 E   L L+ +     L +    L  ++ D    + ++   Y +  +  PG+ IP
Sbjct: 897 KNGKMLESNELSLNRITEDTILVIKSVALYNVLVDKRCSE-IHSYNYDSVVVCLPGSRIP 955

Query: 655 KWFRHQSTGSTISLKTPQPTGYNKL---MGFAFCVVVACS 691
              +++++ S +++      G++ +   +GF F VVV+ S
Sbjct: 956 SQLKYKTSDSKLTI------GFSDIYYSLGFIFAVVVSPS 989


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 133/240 (55%), Gaps = 6/240 (2%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           E + N   FSKM+ LRLLK     N  +    E +    LR+ EWH +P K+L   L  +
Sbjct: 599 EARWNMKAFSKMSRLRLLKI---DNVQLFEGPEDLS-NNLRFLEWHSYPSKSLPAGLQVD 654

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW   ++ V+LK I+L  S  L++ PDL+   NL+ L L  C+SL+
Sbjct: 655 ELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLS 714

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  KL+ ++L  CKS+  LP ++  + L+   L GCS L+  P +  + +   
Sbjct: 715 EVHPSLAHHKKLQHVNLVNCKSIRILPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLM 774

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L   GI +L SSI  L  +G L + +CK L++I SSI  L+ L+ + +  C  L+++
Sbjct: 775 VLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYI 834



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 21/176 (11%)

Query: 283 KSLTSLEIIDCPN---FERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           KS  +L+II+  N     + PD L  +  L  LI++G T++ E+   L     L  + L 
Sbjct: 674 KSAVNLKIINLSNSLNLSQTPD-LTGIPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLV 732

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV- 390
           NC  +  + +++ +++S+E   +  CS L+ FP+I           +D +GI ++ SS+ 
Sbjct: 733 NCKSIRILPNNL-EMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIH 791

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                  L +N C  L+S+PSS+   KSL  L++  C +L+ +P+ LG +E+LEE 
Sbjct: 792 YLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEF 847



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 30/286 (10%)

Query: 282 FKSLTSLEIIDCPNFERL--PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
           F  ++ L ++   N +    P++L N   L  L       + LP GL Q+  L +L + N
Sbjct: 607 FSKMSRLRLLKIDNVQLFEGPEDLSN--NLRFLEWHSYPSKSLPAGL-QVDELVELHMAN 663

Query: 340 CS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSV--- 390
            +  +L Y   S   LK +    S+ +S   +L G P +    ++G + +  +  S+   
Sbjct: 664 SNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLSEVHPSLAHH 723

Query: 391 -----LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
                + L  C  +  LP++L M +SL    +  C KLE+ PD  GN+  L  LR++ TG
Sbjct: 724 KKLQHVNLVNCKSIRILPNNLEM-ESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETG 782

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           I ++  S+  L  L  L +  C + +S+PS +   KSL  L++  C     +P+ +G +E
Sbjct: 783 ITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVE 842

Query: 505 YLKVL-------TIKGTAI--REVPESLGQLSSLEWLVLSDNNLQI 541
            L+         T  G A+   E+P         EW   S +N+++
Sbjct: 843 SLEEFDGLSNPRTRFGIAVPGNEIPGWFNHQKLQEWQHGSFSNIEL 888



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 14/192 (7%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFL 244
           G+ ++EL       SN+ E L Y CK     ++ N+S+S   L   ++  +   PNL+ L
Sbjct: 650 GLQVDELVELHMANSNL-EQLWYGCKSAVNLKIINLSNS---LNLSQTPDLTGIPNLKSL 705

Query: 245 EMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            +  C     +  + +  +    + L  C     LP+   M +SL    +  C   E+ P
Sbjct: 706 ILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLEM-ESLEVCTLDGCSKLEKFP 764

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           D  GN+  L  L +D T I +L   +  L  L  L + NC  L+ I SSI  LKS++ ++
Sbjct: 765 DIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSLKKLD 824

Query: 361 ISNCSNLKGFPE 372
           +S CS LK  PE
Sbjct: 825 LSGCSELKYIPE 836



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 37/206 (17%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAI 516
           L  L L+ C+S   +   L   K L  + +++CK+   LP+ +  +E L+V T+ G + +
Sbjct: 702 LKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNL-EMESLEVCTLDGCSKL 760

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSL 575
            + P+  G ++ L  L L +  +  +  S++ L  L  L ++N  NL+ IP  +  L SL
Sbjct: 761 EKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLKSL 820

Query: 576 KYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
           K LDL   + L  IPE L    +    EF  L                            
Sbjct: 821 KKLDLSGCSELKYIPENLGKVESL--EEFDGLS--------------------------- 851

Query: 635 SVNGETYITKSMYFPGNEIPKWFRHQ 660
             N  T     +  PGNEIP WF HQ
Sbjct: 852 --NPRTRF--GIAVPGNEIPGWFNHQ 873



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)

Query: 101 LTKLPDLSLAQN-LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
           L K PD++   N L +L L   + +T+  SSI YL  L +L ++ CK+L S+P+SI   K
Sbjct: 760 LEKFPDIAGNMNCLMVLRLDE-TGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLK 818

Query: 159 YLKRLVLRGCSNLKNLPK 176
            LK+L L GCS LK +P+
Sbjct: 819 SLKKLDLSGCSELKYIPE 836


>gi|298378158|gb|ADI80539.1| recognition of Peronospora parasitica 1 [Arabidopsis thaliana]
          Length = 1154

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 53/384 (13%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LR  +W+ +    L +  + E LV L M  SK+  LW+  + L +LK +DL YS  L +
Sbjct: 664 KLRSLKWYGYQNICLPSTFNPEFLVELDMSFSKLWNLWEGTKQLRNLKWMDLSYSSYLKE 723

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LP+LS A NLE L L  CSSL E   S     KLE LDL+ C+SL  LP   ++  L++L
Sbjct: 724 LPNLSTATNLEELRLSNCSSLVEL-PSFGNATKLEKLDLENCRSLVKLPAIENATKLRKL 782

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L  CS+L                       ELP SI   +N+ +L +  C  L  + SS
Sbjct: 783 KLEDCSSLI----------------------ELPLSIGTATNLKKLDMNGCSSLVRLPSS 820

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           I  +  LE   +  C NL  +E+PS +I   R      + L ++ C + E+LP+   +  
Sbjct: 821 IGDMTSLEGFDLSNCSNL--VELPS-SIGNLRK----LALLLMRGCSKLETLPTNINLI- 872

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL  L++ DC   +  P+   ++ +   L + GTAI+E+P  +   + L+  ++   S  
Sbjct: 873 SLRILDLTDCSRLKSFPEISTHIDS---LYLIGTAIKEVPLSIMSWSPLADFQI---SYF 926

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
           E +         +  +++S     K   E+P        ++R+     L+LN C+ L SL
Sbjct: 927 ESLKEFPHAFDIITKLQLS-----KDIQEVP------PWVKRMSRLRDLRLNNCNNLVSL 975

Query: 403 PSSLCMFKSLTSLEIIDCKKLERL 426
           P    +  SL  L   +CK LERL
Sbjct: 976 PQ---LPDSLAYLYADNCKSLERL 996



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 182/416 (43%), Gaps = 96/416 (23%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
            ++ELP  L     L +L L NCS L  + S       +E +++ NC +L   P I     
Sbjct: 721  LKELP-NLSTATNLEELRLSNCSSLVELPS-FGNATKLEKLDLENCRSLVKLPAIE---- 774

Query: 379  DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
            + + + +     LKL  CS L  LP S+    +L  L++  C  L RLP  +G++ +LE 
Sbjct: 775  NATKLRK-----LKLEDCSSLIELPLSIGTATNLKKLDMNGCSSLVRLPSSIGDMTSLEG 829

Query: 439  LRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
              +   + + E+P S+  L  L+ L ++ CS  E+LP+ + +  SL  L++ DC      
Sbjct: 830  FDLSNCSNLVELPSSIGNLRKLALLLMRGCSKLETLPTNINLI-SLRILDLTDCSRLKSF 888

Query: 497  PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-------------------- 536
            P+   +++ L ++   GTAI+EVP     LS + W  L+D                    
Sbjct: 889  PEISTHIDSLYLI---GTAIKEVP-----LSIMSWSPLADFQISYFESLKEFPHAFDIIT 940

Query: 537  -----NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDLFE 582
                  ++Q +P  + ++S L  L+L+N NNL  +P+  D L+        SL+ LD   
Sbjct: 941  KLQLSKDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCF 1000

Query: 583  NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYI 642
            NN    PE    FP                 NC KL+  E  ++I            T  
Sbjct: 1001 NN----PEISLYFP-----------------NCFKLN-QEARDLIM----------HTST 1028

Query: 643  TKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFAFCVVVACSVSE 694
                  PG ++P  F H++T G T+ +K   +P PT     + F  C+++     E
Sbjct: 1029 RNFAMLPGTQVPACFNHRATSGDTLKIKLKESPLPTT----LRFKACIMLVKGYKE 1080



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 47/271 (17%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLII-DGTA 318
           EL+L  C     LPS    F + T LE +D   C +  +LP  + N   L +L + D ++
Sbjct: 735 ELRLSNCSSLVELPS----FGNATKLEKLDLENCRSLVKLP-AIENATKLRKLKLEDCSS 789

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           + ELP  +G    L KL++  CS L  + SSI  + S+E  ++SNCSNL   P       
Sbjct: 790 LIELPLSIGTATNLKKLDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVELP------- 842

Query: 379 DGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
             S I  +   ++L +  CSKLE+LP+++ +  SL  L++ DC +L+  P+   ++++L 
Sbjct: 843 --SSIGNLRKLALLLMRGCSKLETLPTNINLI-SLRILDLTDCSRLKSFPEISTHIDSLY 899

Query: 438 ELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP---------SRLYVSKS------- 481
            +   GT I+EVP S+  ++ S L   + S FESL          ++L +SK        
Sbjct: 900 LI---GTAIKEVPLSI--MSWSPLADFQISYFESLKEFPHAFDIITKLQLSKDIQEVPPW 954

Query: 482 ------LTSLEIIDCKNFMRLPDEIGNLEYL 506
                 L  L + +C N + LP    +L YL
Sbjct: 955 VKRMSRLRDLRLNNCNNLVSLPQLPDSLAYL 985


>gi|297825395|ref|XP_002880580.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326419|gb|EFH56839.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1067

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 185/385 (48%), Gaps = 37/385 (9%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGS------KNKCMVHSLEGV--PFTELRYFEWHQ 53
           SK+   + ++  TF  M  LR +K   S        +C ++  +G+  P  E+RY  W +
Sbjct: 506 SKLTKSMCLDILTFIDMRNLRYMKIYDSCCPRQCNAECKLNFPDGLEFPLGEVRYLHWVK 565

Query: 54  FPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           FPL+ L      ENLV L++P SK+T++W+  ++   LK +DL +S  L  L  LS A+N
Sbjct: 566 FPLEELPPDFRPENLVDLRLPYSKITRVWEGEKDTPRLKWVDLSHSSELLDLSALSKAEN 625

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L+ L+L  C+SL E    IQ +  L  L+L  C  L SLP  ++   LK L+L  CSNL+
Sbjct: 626 LQRLNLEGCTSLDEFPLEIQNMKSLVFLNLRGCIRLCSLP-EVNLISLKTLILSDCSNLE 684

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
               ++       L L G  I+ LP +I+ L  +  L + +CK L  + + +  L+ L+ 
Sbjct: 685 EFQLISES--VEFLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLPNCLGNLKALDK 742

Query: 233 IRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF-K 283
           + +  C  L+ L         + +   DGT +KE PS       C      P+   MF +
Sbjct: 743 LILSGCSRLKNLPDVRNSLKHLHTLLFDGTGAKEMPSIS-----CFTGSEGPASADMFLQ 797

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L S+           P  +  + +L  L + G     L   +G+L  L  L++K+C++L
Sbjct: 798 TLGSM--------TEWPCAVNRVSSLRHLCLSGNDFVSLQPDIGKLYNLKWLDVKHCTKL 849

Query: 344 EYISSSIFKLKSVESIEISNCSNLK 368
             +     KL+  ++     C +LK
Sbjct: 850 RSVPMLPPKLQYFDA---HGCDSLK 871



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 222/509 (43%), Gaps = 80/509 (15%)

Query: 317  TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
            + I  + EG      L  ++L + SEL  +S+ + K ++++ + +  C++L  FP     
Sbjct: 588  SKITRVWEGEKDTPRLKWVDLSHSSELLDLSA-LSKAENLQRLNLEGCTSLDEFP----- 641

Query: 377  NIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                  I+ + S V L L  C +L SLP    +  SL +L + DC  LE    +L + E+
Sbjct: 642  ----LEIQNMKSLVFLNLRGCIRLCSLPEVNLI--SLKTLILSDCSNLEEF--QLIS-ES 692

Query: 436  LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            +E L ++GT I+ +P+++ +L  L  L LK C     LP+ L   K+L  L +  C    
Sbjct: 693  VEFLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLPNCLGNLKALDKLILSGCSRLK 752

Query: 495  RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII------PESLNQ 548
             LPD   +L++L  L   GT  +E+P S+   +  E    +D  LQ +      P ++N+
Sbjct: 753  NLPDVRNSLKHLHTLLFDGTGAKEMP-SISCFTGSEGPASADMFLQTLGSMTEWPCAVNR 811

Query: 549  LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLRSFPT------- 597
            +SSL  L LS N+   +   +  L +LK+LD+       ++  +P  L+ F         
Sbjct: 812  VSSLRHLCLSGNDFVSLQPDIGKLYNLKWLDVKHCTKLRSVPMLPPKLQYFDAHGCDSLK 871

Query: 598  --SIPSEFTSL----RLSVDLRNCLKLDPN----------ELSEIIKDGWMKQSVNGETY 641
              + P  F+ L      +    NC KLD +            S++++D   + +    + 
Sbjct: 872  RVADPIAFSVLSDQIHATFSFTNCNKLDQDAKDSIISYTLRRSQLVRDELTQYNGGLVSE 931

Query: 642  ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESV 701
                  FPG E+P WF HQ++GS +  K P     NK  G   C V+          +  
Sbjct: 932  ALIGTCFPGWEVPAWFSHQASGSVLKPKLPAHWCDNKFTGIGLCAVIL--------FDGY 983

Query: 702  EDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFF- 760
             + RK  L    C+ ++E    Y SS     +  + D           E  C  ++ +  
Sbjct: 984  HNQRKRVLLKCNCEFKNE----YGSSQRFSWTVGDDD-----------EEKCVCTETYIE 1028

Query: 761  FHIDRSC-----CEVKKCGIHFVHAQRQR 784
            F +         CEV KCG   V++  +R
Sbjct: 1029 FEVTDGMEAIEDCEVVKCGFSLVNSPEER 1057



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 30/247 (12%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C R  SLP    +  SL +L + DC N E    +L + +++  L +DGTAI+ LP
Sbjct: 653 LNLRGCIRLCSLPEVNLI--SLKTLILSDCSNLEEF--QLIS-ESVEFLHLDGTAIKGLP 707

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFC 376
           + + +L  L  L LKNC  L  + + +  LK+++ + +S CS LK  P++          
Sbjct: 708 QAIQKLQRLVVLNLKNCKMLACLPNCLGNLKALDKLILSGCSRLKNLPDVRNSLKHLHTL 767

Query: 377 NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF-KSLTSLEIIDCKKLERLPDELGNLEA 435
             DG+G + +PS       C      P+S  MF ++L S        +   P  +  + +
Sbjct: 768 LFDGTGAKEMPSI-----SCFTGSEGPASADMFLQTLGS--------MTEWPCAVNRVSS 814

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           L  L + G     +   + +L  L  L +K C+   S+P    +   L   +   C +  
Sbjct: 815 LRHLCLSGNDFVSLQPDIGKLYNLKWLDVKHCTKLRSVP---MLPPKLQYFDAHGCDSLK 871

Query: 495 RLPDEIG 501
           R+ D I 
Sbjct: 872 RVADPIA 878


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 176/364 (48%), Gaps = 63/364 (17%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
           T + I+   N E LP E+G LQ L  L +    ++ LP+ +G+L  + +L L N ++L  
Sbjct: 42  TDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSN-NQLTT 100

Query: 346 ISSSIFKLKSVESIEISN---------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           +   I KLK +  ++++N            L+   E+   N                   
Sbjct: 101 LPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTN------------------- 141

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           ++L++LP  +   ++L  L  +D  +L+ LP ++G L+ L EL ++G  ++ +PK + +L
Sbjct: 142 NQLKTLPKDIGQLQNLREL-YLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKL 200

Query: 457 A-LSKLKL---------KKCSSFESLPSRLYVSKSLTSL--EIIDCKNFM---------R 495
             L++L L         K   + ++L   L ++  LT+L  EI   KN            
Sbjct: 201 QNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGALLTT 260

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP++IG L+ L+ L + G  I  +P+ +GQL +L+ L LS+N L  +P+ + QL +L  L
Sbjct: 261 LPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLREL 320

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP------EYLRSFP------TSIPSEF 603
            LS N +  +P+ +  L SL+ L+L  N L  +P      + LR         T+IP E 
Sbjct: 321 DLSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEI 380

Query: 604 TSLR 607
             L+
Sbjct: 381 GHLK 384



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 25/196 (12%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           LS+LK ++  ++ +L   L   ++ T + I+   N   LP EIG L+ L  L +    ++
Sbjct: 20  LSQLKAQEIGTYHNLTEAL---QNPTDVRILSLHNNETLPKEIGELQNLTELYLSSNQLK 76

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +P+ +G+L  +E L LS+N L  +P+ + +L  L  L L+NN L  +P+ +  L +L+ 
Sbjct: 77  TLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRE 136

Query: 578 LDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVN 637
           LDL  N L  +P+ +         +  +LR        L LD N+L  + KD    Q++ 
Sbjct: 137 LDLTNNQLKTLPKDI--------GQLQNLR-------ELYLDNNQLKTLPKDIGQLQNL- 180

Query: 638 GETYITKSMYFPGNEI 653
                 + +Y  GN++
Sbjct: 181 ------RELYLDGNQL 190



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 150/331 (45%), Gaps = 37/331 (11%)

Query: 43  FTELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
            TEL Y   +Q  LKTL   I   + +  L +  +++T L  D+  L  L+ +DL  + L
Sbjct: 65  LTEL-YLSSNQ--LKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDL-TNNL 120

Query: 101 LTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
           LT LP ++   QNL  LDL   + L      I  L  L  L LD  + L +LP  I   +
Sbjct: 121 LTTLPKEIGQLQNLRELDL-TNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIGQLQ 178

Query: 159 YLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
            L+ L L G + LK LPK +      + L L    +  LP  I  L N+GELL+ + + L
Sbjct: 179 NLRELYLDG-NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNE-L 236

Query: 218 ENISSSIFKLQFLE----SIRIHRCPN-LQFLE-MPSCNIDGTRSKEQPSSELKLKKCPR 271
             +   I KL+ L+       +   PN + +L+ +   N+ G +    P    +L+    
Sbjct: 237 TTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNL-- 294

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
                  Q ++ S   L          LP E+G LQ L  L + G  I  LP+ +G+L  
Sbjct: 295 -------QVLYLSENQLAT--------LPKEIGQLQNLRELDLSGNQITTLPKDIGELQS 339

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L +L L + + L  +   I KL+S+  + + 
Sbjct: 340 LRELNL-SGNLLTTLPKDIGKLQSLRELNLG 369


>gi|15235064|ref|NP_193688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2853080|emb|CAA16930.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268749|emb|CAB78955.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|332658795|gb|AEE84195.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1167

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 214/479 (44%), Gaps = 69/479 (14%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV- 390
            L  ++L + S+LE +S  + +  ++E + +  C+ LK     P         E + S V 
Sbjct: 667  LRWVDLNHSSKLENLSG-LSQALNLERLNLEGCTALKTLLLGP---------ENMASLVF 716

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C+ LESLP      +SL +L + +C  LE         E L  L ++GT I+ +P
Sbjct: 717  LNLKGCTGLESLPK--INLRSLKTLILSNCSNLEEF---WVISETLYTLYLDGTAIKTLP 771

Query: 451  KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            + + +L +L KL +K C     LP      K L  L    CK    LPD + N++ L++L
Sbjct: 772  QDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKVLQELVCSGCKRLSSLPDVMKNMQCLQIL 831

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
             + GTAI ++P     +SSLE L LS N  +  +   +  LS L  L L     L  IPE
Sbjct: 832  LLDGTAITKIP----HISSLERLCLSRNEKISCLSNDIRLLSQLKWLDLKYCTKLVSIPE 887

Query: 568  RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
               P ++L+ LD   N  + +        T +P+E   +  +    NC KLD        
Sbjct: 888  L--P-TNLQCLD--ANGCESLTTVANPLATHLPTE--QIHSTFIFTNCDKLD-----RTA 935

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
            K+G++ +++        S  FPG E+P WF H++ GS + L        N+ +G A C V
Sbjct: 936  KEGFVPEALF-------STCFPGCEVPSWFCHEAVGSVLKLNLLPHWNENRFVGIALCAV 988

Query: 688  V-----------ACSVSECCRHESVEDDRKCNLFDVVCDR---RSEGYDSYTSSYLGKIS 733
            V           +CSV+ C  + + +D +K + + +  DR   R   + +       K+ 
Sbjct: 989  VGSLPNCQEQTNSCSVT-CTFNIASKDSKKGDPYKISFDRLVGRWNKHGNKLDKKGNKLK 1047

Query: 734  HVESDHVFLGSSIFAGENSCKRSD------------EFFFHIDRSCCEVKKCGIHFVHA 780
              ESDHVF+  +  +    C +              EF      S  EV KCG+  V+A
Sbjct: 1048 KTESDHVFICYTRCSNSIKCLQDQHSGTCTPTEAFLEFGVTDKESRLEVLKCGLRLVYA 1106



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 185/447 (41%), Gaps = 82/447 (18%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           M  + +++ +       M  LR LKF        C  K    +     +P  E+R   W 
Sbjct: 569 MYVMKTDVTLGTDYLKNMRNLRYLKFYSSHCPQECTPKENIHIPGELELPLEEVRCLHWL 628

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            FP   L      +NLV LK+P SK+ Q+W + ++   L+ +DL +S  L  L  LS A 
Sbjct: 629 NFPKDELPQDFIPKNLVDLKLPYSKIRQIWREEKDAPKLRWVDLNHSSKLENLSGLSQAL 688

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE L+L  C++L       + +  L  L+L  C  L SLP  I+ + LK L+L  CSNL
Sbjct: 689 NLERLNLEGCTALKTLLLGPENMASLVFLNLKGCTGLESLP-KINLRSLKTLILSNCSNL 747

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +    ++      TL L G  I+ LP  +  L+++ +L +  C+ L  +     KL+ L+
Sbjct: 748 EEFWVISETLY--TLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKVLQ 805

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                                          EL    C R  SL                
Sbjct: 806 -------------------------------ELVCSGCKRLSSL---------------- 818

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
                   PD + N+Q L  L++DGTAI ++P     ++ L +L L    ++  +S+ I 
Sbjct: 819 --------PDVMKNMQCLQILLLDGTAITKIP----HISSLERLCLSRNEKISCLSNDIR 866

Query: 352 KLKSVESIEISNCSNLKGFPEIP--FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
            L  ++ +++  C+ L   PE+P     +D +G E + +    L      E + S+    
Sbjct: 867 LLSQLKWLDLKYCTKLVSIPELPTNLQCLDANGCESLTTVANPLATHLPTEQIHSTFI-- 924

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEAL 436
                    +C KL+R   E    EAL
Sbjct: 925 -------FTNCDKLDRTAKEGFVPEAL 944


>gi|108740477|gb|ABG01594.1| disease resistance protein [Arabidopsis thaliana]
          Length = 403

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNLVE------------------FPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 179/378 (47%), Gaps = 52/378 (13%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           M+++  E+ ++  TF  M  LR LK         C   NK  +      P  E+RY  W 
Sbjct: 556 MNEMKREMSLDSCTFEPMLGLRYLKIYSSGCPEQCRPNNKINLPDGLNFPVEEVRYLHWL 615

Query: 53  QFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPLK L    +  NLV LK+P SK+ ++W D ++   LK ++L +S  L  L  LS AQ
Sbjct: 616 EFPLKELPPDFNPRNLVDLKLPYSKIERIWSDDKDTSKLKWVNLNHSSNLRVLSGLSKAQ 675

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NL+ L+L  C+ +      +Q++  L VL+L+ C SL SLP  I    L+ L+L  CSNL
Sbjct: 676 NLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLP-EISLVSLETLILSNCSNL 734

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K   ++ S +L + L L G  +++LP  IK L  +  L +  C +L+             
Sbjct: 735 KEF-RVISQNLEA-LYLDGTSVKKLPLDIKILKRLALLNMKGCTKLK------------- 779

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                        E P C +D  ++ +    EL L  C + +  P+     K L +L  +
Sbjct: 780 -------------EFPDC-LDDLKALK----ELILSDCSKLQQFPANGESIKVLETLR-L 820

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D      +P ++ +LQ L   +     I  LP+ + QL  L  L+LK C  L    +SI 
Sbjct: 821 DATGLTEIP-KISSLQCL--CLSKNDQIISLPDNISQLYQLKWLDLKYCKSL----TSIP 873

Query: 352 KL-KSVESIEISNCSNLK 368
           KL  +++  +   C +LK
Sbjct: 874 KLPPNLQHFDAHGCCSLK 891



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 42/330 (12%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE---------LGNLEALEELRV 441
           L L  C+K+E+LP  +   +SL  L +  C  L  LP+          L N   L+E RV
Sbjct: 680 LNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEISLVSLETLILSNCSNLKEFRV 739

Query: 442 ----------EGTGIREVP---KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
                     +GT ++++P   K L +LAL  L +K C+  +  P  L   K+L  L + 
Sbjct: 740 ISQNLEALYLDGTSVKKLPLDIKILKRLAL--LNMKGCTKLKEFPDCLDDLKALKELILS 797

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII--PESL 546
           DC    + P    +++ L+ L +  T + E+P    ++SSL+ L LS N+ QII  P+++
Sbjct: 798 DCSKLQQFPANGESIKVLETLRLDATGLTEIP----KISSLQCLCLSKND-QIISLPDNI 852

Query: 547 NQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTS--IPSE 602
           +QL  L  L L    +L  IP +L P  +L++ D     +L  +   L    T+  I S 
Sbjct: 853 SQLYQLKWLDLKYCKSLTSIP-KLPP--NLQHFDAHGCCSLKTVSNPLACLTTTQQICST 909

Query: 603 F---TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
           F   +  +L +  +  +        +++ D     +V+    +  S  FPG+E+P W  H
Sbjct: 910 FIFTSCNKLEMSAKKDISSFAQRKCQLLSDAQNCCNVSDLEPLF-STCFPGSELPSWLGH 968

Query: 660 QSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           ++ G  + L+ P     NKL G A C VV+
Sbjct: 969 EAVGCMLELRMPPHWRENKLAGLALCAVVS 998



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 22/224 (9%)

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           R+   L   Q L RL ++G T +  LP  +  +  L  L L  C+ L  +      L S+
Sbjct: 666 RVLSGLSKAQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPE--ISLVSL 723

Query: 357 ESIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSV--------LKLNKCSKLESLPS 404
           E++ +SNCSNLK F  I        +DG+ ++++P  +        L +  C+KL+  P 
Sbjct: 724 ETLILSNCSNLKEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPD 783

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK--SLAQLALSKLK 462
            L   K+L  L + DC KL++ P    +++ LE LR++ TG+ E+PK  SL  L LS   
Sbjct: 784 CLDDLKALKELILSDCSKLQQFPANGESIKVLETLRLDATGLTEIPKISSLQCLCLS--- 840

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             K     SLP  +     L  L++  CK+   +P    NL++ 
Sbjct: 841 --KNDQIISLPDNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHF 882



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 30/212 (14%)

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD------------EL 303
           SK Q    L L+ C + E+LP      +SL  L +  C +   LP+              
Sbjct: 672 SKAQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEISLVSLETLILSNC 731

Query: 304 GNL-------QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            NL       Q L  L +DGT++++LP  +  L  L+ L +K C++L+     +  LK++
Sbjct: 732 SNLKEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKAL 791

Query: 357 ESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPS----SVLKLNKCSKLESLPSS 405
           + + +S+CS L+ FP        +    +D +G+  IP       L L+K  ++ SLP +
Sbjct: 792 KELILSDCSKLQQFPANGESIKVLETLRLDATGLTEIPKISSLQCLCLSKNDQIISLPDN 851

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           +     L  L++  CK L  +P    NL+  +
Sbjct: 852 ISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFD 883


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 9/231 (3%)

Query: 44  TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
            +LR+ EWH +P K+L   L  + LV L M  S + QLW   ++ V+LK I+L  S  L 
Sbjct: 597 NKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLI 656

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
           K PD +   NLE L L  C+SL+E H S+    KL+ ++L  C+S+  LP+++  + LK 
Sbjct: 657 KTPDFTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEMESLKV 716

Query: 163 LVLRGCSNLKNLPKMT-SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
             L GCS L+  P +  + +    L L G GI EL SSI+ L  +G L + +CK LE+I 
Sbjct: 717 FTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIP 776

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           SSI  L+ L+ + +  C  L+       NI     K +   E      PRP
Sbjct: 777 SSIGCLKSLKKLDLSCCSALK-------NIPENLGKVESLEEFDGFSNPRP 820



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 154/380 (40%), Gaps = 91/380 (23%)

Query: 410 KSLTSLEIIDCKK---LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
           KS  +L+II+      L + PD  G +  LE L +EG T + EV  SLA+   L  + L 
Sbjct: 639 KSAVNLKIINLSNSLNLIKTPDFTG-IPNLENLILEGCTSLSEVHPSLARHKKLQHVNLV 697

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C S   LPS L + +SL    +  C    R PD +GN+  L VL + GT I E+  S+ 
Sbjct: 698 HCQSIRILPSNLEM-ESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIR 756

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-N 583
            L  L                   L S+ + K    NLE IP  +  L SLK LDL   +
Sbjct: 757 HLIGL------------------GLLSMTNCK----NLESIPSSIGCLKSLKKLDLSCCS 794

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYIT 643
            L  IPE L    +    EF               +P       + G+            
Sbjct: 795 ALKNIPENLGKVESL--EEFDGFS-----------NP-------RPGF------------ 822

Query: 644 KSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVED 703
             +  PGNEIP WF H+S GS+IS++ P        MGF  CV                +
Sbjct: 823 -GIAVPGNEIPGWFNHRSKGSSISVQVPSGR-----MGFFACVAFNA------------N 864

Query: 704 DRKCNLFDVVCDRRSEGYDSYTSSY-LGKISHVESDHVFLGSSIF-------AGENSCKR 755
           D   +LF   C  ++ G ++Y S   +    H+ SDH++L    F         ++    
Sbjct: 865 DESPSLF---CHFKANGRENYPSPMCINFEGHLFSDHIWLFYLSFDYLKELQEWQHESFS 921

Query: 756 SDEFFFHIDRSCCEVKKCGI 775
           + E  FH      +V  CG+
Sbjct: 922 NIELSFHSYEQGVKVNNCGV 941



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 320 RELPEGLGQLALLSKLELKNCS--ELEYISSSIFKLKSVE---SIEISNCSNLKGFPEIP 374
           + LP GL Q+  L +L + N S  +L Y   S   LK +    S+ +    +  G P + 
Sbjct: 610 KSLPAGL-QVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPDFTGIPNLE 668

Query: 375 FCNIDG-SGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
              ++G + +  +  S+ +  K        C  +  LPS+L M +SL    +  C KLER
Sbjct: 669 NLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEM-ESLKVFTLDGCSKLER 727

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            PD +GN+  L  LR++GTGI E+  S+  L  L  L +  C + ES+PS +   KSL  
Sbjct: 728 FPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLKK 787

Query: 485 LEIIDCKNFMRLPDEIGNLEYLK 507
           L++  C     +P+ +G +E L+
Sbjct: 788 LDLSCCSALKNIPENLGKVESLE 810



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 14/192 (7%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCK-----RLENISSSIFKLQFLESIRIHRCPNLQFL 244
           G+ ++EL       S+I E L Y CK     ++ N+S+S   L  +++      PNL+ L
Sbjct: 615 GLQVDELVELHMANSSI-EQLWYGCKSAVNLKIINLSNS---LNLIKTPDFTGIPNLENL 670

Query: 245 EMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            +  C     +  + ++ +    + L  C     LPS   M +SL    +  C   ER P
Sbjct: 671 ILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLEM-ESLKVFTLDGCSKLERFP 729

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           D +GN+  L  L +DGT I EL   +  L  L  L + NC  LE I SSI  LKS++ ++
Sbjct: 730 DIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLKSLKKLD 789

Query: 361 ISNCSNLKGFPE 372
           +S CS LK  PE
Sbjct: 790 LSCCSALKNIPE 801



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 24/170 (14%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELE 344
            SL +I  P+F  +P+       L  LI++G T++ E+   L +   L  + L +C  + 
Sbjct: 651 NSLNLIKTPDFTGIPN-------LENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIR 703

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV------- 390
            + S++ +++S++   +  CS L+ FP+I           +DG+GI  + SS+       
Sbjct: 704 ILPSNL-EMESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLG 762

Query: 391 -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
            L +  C  LES+PSS+   KSL  L++  C  L+ +P+ LG +E+LEE 
Sbjct: 763 LLSMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEF 812


>gi|108740411|gb|ABG01561.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +   I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPIHI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPI-HINLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             + + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 IHINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|108740350|gb|ABG01531.1| disease resistance protein [Arabidopsis thaliana]
          Length = 405

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|108740360|gb|ABG01536.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740383|gb|ABG01547.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740389|gb|ABG01550.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740419|gb|ABG01565.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740421|gb|ABG01566.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740429|gb|ABG01570.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740431|gb|ABG01571.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740441|gb|ABG01576.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740443|gb|ABG01577.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740479|gb|ABG01595.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740483|gb|ABG01597.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 184/383 (48%), Gaps = 51/383 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSK----NKCMVHSLEGVPFTELRYFEWHQFPLKTLN-I 61
           E   N   FSKM +L+LL     +     KC+ ++L        R+  W  +P K+L   
Sbjct: 550 EADWNLEAFSKMCKLKLLYIHNLRLSVGPKCLPNAL--------RFLSWSWYPSKSLPPC 601

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              E L  L +  S +  LW+ ++ L  LK IDL YS  LT+ PD +   NLE L L  C
Sbjct: 602 FQPEELTELSLVHSNIDHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGISNLEKLILEGC 661

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           ++L + H SI  L +L++ +   CKS+  LP+ ++ ++L+   + GCS LK +P+     
Sbjct: 662 TNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEVNMEFLETFDVSGCSKLKMIPEFVGQM 721

Query: 182 LR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            R S L L G  +E+LPSSI                 E  S S+ +L  L  I I   P 
Sbjct: 722 KRLSKLRLGGTAVEKLPSSI-----------------ERWSESLVELD-LSGIVIREQPY 763

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE-R 298
            +FL+    N+  +      S  L  +K P P   L +    F SLT L++ DC  FE  
Sbjct: 764 SRFLKQ---NLIAS------SLGLFPRKSPHPLIPLLASLKHFSSLTELKLNDCNLFEGD 814

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS--SSIFKLKSV 356
           +P+++G+L +L  L + G     LP  +  L+ L  + ++NC  L+ +   S+I  L   
Sbjct: 815 IPNDIGSLSSLRSLGLRGNNFVSLPASIHLLSKLEYINVENCKRLQQLPELSAIGVLSRT 874

Query: 357 ESIEISNCSNLKGFPEIP-FCNI 378
           +     NC+ L+ FP+ P  C I
Sbjct: 875 D-----NCTALQLFPDPPDLCRI 892



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 233/521 (44%), Gaps = 99/521 (19%)

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            PE L +L+L+        S ++++ + I  L  ++SI++S   NL   P       D +G
Sbjct: 604  PEELTELSLVH-------SNIDHLWNGIKYLGKLKSIDLSYSINLTRTP-------DFTG 649

Query: 383  IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            I  +    L L  C+ L  +  S+ + K L      +CK ++RLP E+ N+E LE   V 
Sbjct: 650  ISNLEK--LILEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEV-NMEFLETFDVS 706

Query: 443  G-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL-YVSKSLTSLE----IIDCKNFMR 495
            G + ++ +P+ + Q+  LSKL+L   ++ E LPS +   S+SL  L+    +I  + + R
Sbjct: 707  GCSKLKMIPEFVGQMKRLSKLRLGG-TAVEKLPSSIERWSESLVELDLSGIVIREQPYSR 765

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL--QIIPESL 546
               +  NL    + +  G   R+ P        SL   SSL  L L+D NL    IP  +
Sbjct: 766  FLKQ--NL----IASSLGLFPRKSPHPLIPLLASLKHFSSLTELKLNDCNLFEGDIPNDI 819

Query: 547  NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPE-------------- 590
              LSSL SL L  NN   +P  +  LS L+Y+++ EN   L ++PE              
Sbjct: 820  GSLSSLRSLGLRGNNFVSLPASIHLLSKLEYINV-ENCKRLQQLPELSAIGVLSRTDNCT 878

Query: 591  YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE-----LSEIIKDGWMKQSVNGETYITKS 645
             L+ FP        +   S++  NCL +  N+     L  ++K  W++  V     +T  
Sbjct: 879  ALQLFPDPPDLCRITTNFSLNCVNCLSMVCNQDASYFLYAVLKR-WIEIQVLSRCDMTVH 937

Query: 646  M-------------YFPGNEIPKWFRHQSTGSTISLKTPQPT-GYNKLMGFAFCVVVA-- 689
            M               PG+EIP+WF +QS G +++ K P     Y+K +GFA C ++   
Sbjct: 938  MQKTHRHPSEYLKVVIPGSEIPEWFNNQSVGDSVTEKFPSDACNYSKWIGFAVCALIVPQ 997

Query: 690  ---CSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVF---LG 743
                +V E    +       C   + V D    G   Y   ++       SDH++   L 
Sbjct: 998  DNPSAVPEVPHLDPDTCQILCYWSNFVTDTNLGGVGDYVKQFV-------SDHLWLLVLR 1050

Query: 744  SSIFAGENSCKRSDEFFFHIDRS-----CCEVKKCGIHFVH 779
              +   EN  + +  F F I R+     C +VKKCG+  ++
Sbjct: 1051 RPLRIPENCLEVN--FVFEIRRAVGNNRCMKVKKCGVRALY 1089


>gi|297818930|ref|XP_002877348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297323186|gb|EFH53607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 982

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 202/448 (45%), Gaps = 88/448 (19%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPF--TELRYFEWHQFPL 56
           +S I  ++ +    F++M+ L+ L+F          ++  +G+ +   +LR  EW +FPL
Sbjct: 483 LSDIEDKLNVCEGAFNRMSNLKFLRFHYAYGDQSDKLYLPQGLKYLSRKLRLLEWERFPL 542

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             L +  H E LV LKM  +K+ +LW+  + L +LK ID  YSK L KLPDLS A NL  
Sbjct: 543 TCLPSNFHTEYLVKLKMRYNKLHKLWESNRPLRNLKWIDFSYSKDLKKLPDLSTATNLRE 602

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNL 174
           + L  CSSL E   SI+ +  L+ L L  C SL  LP+SI ++  L  L L GCS+L   
Sbjct: 603 VVLTECSSLVELLFSIENVINLQRLILFGCSSLVMLPSSIENATNLLHLSLVGCSSLV-- 660

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
                               ELP+S+   +N+  L +  C  L  +  SI     L  + 
Sbjct: 661 --------------------ELPNSLGNFTNLKNLYLDRCTGLVELPYSIGNATNLYLLS 700

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           +  C  L  +++PS    G   K      L LK C + E LP      +SL  L++IDC 
Sbjct: 701 LDMCTGL--VKLPSI---GNLHK---LLYLTLKGCLKLEVLPI-NINLESLEKLDLIDCS 751

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
             +  P+   N++ L    + GTA++E+P           L +K+ S L           
Sbjct: 752 RLKLFPEISTNIKYLE---LKGTAVKEVP-----------LSIKSWSRL----------- 786

Query: 355 SVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPSSV--------LKLNKCSKLESL 402
             + +E+S   NLK +P     I    +D + ++ I   V        L L+KC KL   
Sbjct: 787 --DCLEMSYSENLKNYPHALDIITTLYLDNTEVQEIHPWVKRNYRLWGLMLDKCKKLR-- 842

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDEL 430
                      S++  +C KL +   EL
Sbjct: 843 ----------FSVDFTNCLKLNKEAREL 860



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 171/358 (47%), Gaps = 53/358 (14%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           +++LP+ L     L ++ L  CS L  +  SI  + +++ + +  CS+L   P       
Sbjct: 588 LKKLPD-LSTATNLREVVLTECSSLVELLFSIENVINLQRLILFGCSSLVMLP------- 639

Query: 379 DGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
             S IE   + + L L  CS L  LP+SL  F +L +L +  C  L  LP  +GN   L 
Sbjct: 640 --SSIENATNLLHLSLVGCSSLVELPNSLGNFTNLKNLYLDRCTGLVELPYSIGNATNLY 697

Query: 438 ELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            L ++  TG+ ++P       L  L LK C   E LP  + + +SL  L++IDC      
Sbjct: 698 LLSLDMCTGLVKLPSIGNLHKLLYLTLKGCLKLEVLPININL-ESLEKLDLIDCSRLKLF 756

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSL 555
           P+   N++YL+   +KGTA++EVP S+   S L+ L +S   NL+  P +L+ +++L   
Sbjct: 757 PEISTNIKYLE---LKGTAVKEVPLSIKSWSRLDCLEMSYSENLKNYPHALDIITTLY-- 811

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
            L N  ++ I     P     Y  L+   LD+  +               LR SVD  NC
Sbjct: 812 -LDNTEVQEI----HPWVKRNY-RLWGLMLDKCKK---------------LRFSVDFTNC 850

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLKTPQ 672
           LKL+      II+              +K  + PG E+P +F +++T GS++++K  Q
Sbjct: 851 LKLNKEARELIIQTS------------SKRAFLPGREVPAYFTYRATNGSSMTVKFNQ 896


>gi|227438171|gb|ACP30575.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1609

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 133/255 (52%), Gaps = 33/255 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV---PFTELRYFEWHQFPLKTLNILH 63
           EI+I+   F  +  L+ L   G      +++ EG+   P  +LRY  W Q PL+      
Sbjct: 732 EIKISKSAFQGIRNLQFLDIDGG----TLNTPEGLNCLP-NKLRYIHWKQSPLRFWPSKF 786

Query: 64  WENL-VSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
            E L V L MP S   +LW+ ++    LKR+DL  S+ L ++PDLS A +LEILDL YC 
Sbjct: 787 SEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPDLSKATSLEILDLHYCR 846

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTS---------------------LPTSIHS-KYL 160
           SL E  SSI  L  LE LDL  C+SL                       LP+S+ +    
Sbjct: 847 SLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSVSTWSCF 906

Query: 161 KRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
            RL + G S+LK  PK+    +   L L G GIEE+P  I+ L  + +L+++ C+ LE +
Sbjct: 907 YRLNMSGLSDLKKFPKVPYSIVE--LVLSGTGIEEVPPWIENLFRLQQLIMFGCRNLEIV 964

Query: 221 SSSIFKLQFLESIRI 235
           S +I KL+ L++I +
Sbjct: 965 SPNISKLENLQTIAL 979



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 54/306 (17%)

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISS 348
            I+   NFE+L + +     L R+ +  +  ++E+P+ L +   L  L+L  C  L  + S
Sbjct: 795  IMPNSNFEKLWEGIKPFPCLKRMDLSSSEYLKEIPD-LSKATSLEILDLHYCRSLLELPS 853

Query: 349  SIFKLKSVESIEISNCSNLK---GFPEIPFCNIDGSGIE--RIPSSVLKLNKCSKLESLP 403
            SI +L ++E +++  C +L+   G   +   ++  SGI    +PSSV             
Sbjct: 854  SIGRLINLEKLDLHYCRSLEKLSGCSSLKELDLSDSGIGALELPSSV------------- 900

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLK 462
            S+   F  L    + D KK  ++P       ++ EL + GTGI EVP  +  L  L +L 
Sbjct: 901  STWSCFYRLNMSGLSDLKKFPKVP------YSIVELVLSGTGIEEVPPWIENLFRLQQLI 954

Query: 463  LKKCSSFESLPSRLYVSKSLTSLE----IIDCKNFMRLPDEIGNLEYL-KVLTIKGTAIR 517
            +  C + E       VS +++ LE    I  CK+     D++  + Y  +V T     I 
Sbjct: 955  MFGCRNLE------IVSPNISKLENLQTIALCKH-----DDVPEMSYGDEVFT---AVIV 1000

Query: 518  EVPESLGQLSSLEWLVLSDNNLQ-IIPESL--NQLSSLVSLKLSNNNLERIPERLDPLSS 574
              P+S G      W   SD N+  I+P  L    L+S +SL L +  L+ IP+ +  LS 
Sbjct: 1001 GGPDSHGI-----WRFRSDLNVHYILPICLPKKALTSPISLHLFSGGLKTIPDCIRRLSG 1055

Query: 575  LKYLDL 580
            L  L +
Sbjct: 1056 LSELSI 1061


>gi|108740471|gb|ABG01591.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 200/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS       L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAIXLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSXLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS----------------- 479
           L + G + + E+P S+   + L KL L++C+    LPS +  +                 
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAIXLQNLLLDDCSSLLEL 193

Query: 480 -------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
                   +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSXLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 176/392 (44%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI     +++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAIXLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CS LE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSXLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|356558199|ref|XP_003547395.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1062

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 28/269 (10%)

Query: 9   QINPYTFSKMTELRLLKFCGSKNKCMV--HSL--EGVPFT--ELRYFEWHQFPLKTL-NI 61
           +++P+ F KM  L+ L+  G   K +   H++  + + F+  ELR+  W+++PLK+L   
Sbjct: 603 ELDPHIFGKMNRLQFLEISGKCEKDIFDEHNILAKWLQFSANELRFLCWYRYPLKSLPED 662

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              E LV LK+P  ++  LW  V+NL++LK + L  SK+L +LPDLS A NLE+L L  C
Sbjct: 663 FSAEKLVILKLPKGEIKYLWHGVKNLMNLKELHLTDSKMLEELPDLSNATNLEVLVLQGC 722

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KM 177
           S LT  H SI  L KLE L+L  C SLT+L ++ H   L  L L  C  L+ L      +
Sbjct: 723 SMLTRVHPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNLDKCEKLRKLSLIAENI 782

Query: 178 TSCHLRST-----------------LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
               LR T                 L L G  I++LPS IK L  +  L +  C  L+ I
Sbjct: 783 KELRLRWTKVKAFSFTFGHESKLQLLLLEGSVIKKLPSYIKDLMQLSHLNVSYCSNLQEI 842

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
                 L+ L++     C +L+ +  PS 
Sbjct: 843 PKLPPSLKILDARYSQDCTSLKTVVFPST 871



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 167/379 (44%), Gaps = 50/379 (13%)

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI--R 447
            +LKL K  +++ L   +    +L  L + D K LE LPD L N   LE L ++G  +  R
Sbjct: 670  ILKLPK-GEIKYLWHGVKNLMNLKELHLTDSKMLEELPD-LSNATNLEVLVLQGCSMLTR 727

Query: 448  EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
              P   +   L KL L+ C+S  +L S  ++  SL+ L +  C+   +L     N+   K
Sbjct: 728  VHPSIFSLGKLEKLNLQDCTSLTTLASNSHLC-SLSYLNLDKCEKLRKLSLIAENI---K 783

Query: 508  VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
             L ++ T ++    + G  S L+ L+L  + ++ +P  +  L  L  L +S  +NL+ IP
Sbjct: 784  ELRLRWTKVKAFSFTFGHESKLQLLLLEGSVIKKLPSYIKDLMQLSHLNVSYCSNLQEIP 843

Query: 567  ERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
             +L P  SLK LD  +  +   +   +  FP++   +    R  V   NCLKL+   L  
Sbjct: 844  -KLPP--SLKILDARYSQDCTSLKTVV--FPSTATEQLKEYRKEVLFWNCLKLNQQSLEA 898

Query: 626  I--------IKDGWMKQSV-------NGETYITKSMY------FPGNEIPKWFRHQSTGS 664
            I        +K    + SV       N   Y  K  +      +PG+ + +W  +++  +
Sbjct: 899  IALNAQINVMKFANRRLSVSNHDDVENYNDYDKKYHFYQVVYVYPGSSVLEWLEYKTRNN 958

Query: 665  --TISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD 722
               I + +  P+     +GF FC  +          E +E     N+   + DR  EG  
Sbjct: 959  YIIIDMSSAPPS---LPVGFIFCFALGMYGDTSL--ERIE----ANI--TISDREGEGKK 1007

Query: 723  SYTSSYLG-KISHVESDHV 740
                 Y+G +   +ESDH+
Sbjct: 1008 DSVGMYIGLRNGTIESDHL 1026



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 27/240 (11%)

Query: 162 RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
           + +  G  NL NL ++   HL  +  L     EELP  +   +N+  L++  C  L  + 
Sbjct: 679 KYLWHGVKNLMNLKEL---HLTDSKML-----EELPD-LSNATNLEVLVLQGCSMLTRVH 729

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
            SIF L  LE + +  C +L  L   S  C++          S L L KC +   L    
Sbjct: 730 PSIFSLGKLEKLNLQDCTSLTTLASNSHLCSL----------SYLNLDKCEKLRKLSLIA 779

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              K L     +     +      G+   L  L+++G+ I++LP  +  L  LS L +  
Sbjct: 780 ENIKELR----LRWTKVKAFSFTFGHESKLQLLLLEGSVIKKLPSYIKDLMQLSHLNVSY 835

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKG--FPEIPFCNIDGSGIERIPSSVLKLNKCS 397
           CS L+ I      LK +++    +C++LK   FP      +     E +  + LKLN+ S
Sbjct: 836 CSNLQEIPKLPPSLKILDARYSQDCTSLKTVVFPSTATEQLKEYRKEVLFWNCLKLNQQS 895


>gi|108740391|gb|ABG01551.1| disease resistance protein [Arabidopsis thaliana]
          Length = 407

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|108740469|gb|ABG01590.1| disease resistance protein [Arabidopsis thaliana]
          Length = 378

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPI-NINLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYFD-------------N 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++   +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 INI-NLESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 178/379 (46%), Gaps = 51/379 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N   FSKM +L+LL          +H+L    G  +    LR+  W  +P K+L  
Sbjct: 549 EADWNLEAFSKMCKLKLL---------YIHNLRLSLGPIYLPNALRFLNWSWYPSKSLPP 599

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+  + L +LK IDL  S  LT+ PD +   NLE L L  
Sbjct: 600 CFQPDKLTELSLVHSNIDHLWNGKKYLGNLKSIDLSDSINLTRTPDFTGIPNLEKLILEG 659

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS- 179
           C SL + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 660 CISLVKIHPSIASLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQ 719

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
               S L + G  +E LPSS                  E +S S+ +L  L  I I   P
Sbjct: 720 TKTLSKLCIGGSAVENLPSS-----------------FERLSESLVELD-LNGIVIREQP 761

Query: 240 NLQFLEMP-SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE- 297
              FL+     +  G   ++ P        CP    L S +  F SLT L++ DC   E 
Sbjct: 762 YSLFLKQNLRVSFFGLFPRKSP--------CPLTPLLASLK-HFSSLTQLKLNDCNLCEG 812

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G L +L  L + G     LP  +  L+ L ++ ++NC  L+ +     +L + +
Sbjct: 813 EIPNDIGYLSSLELLQLIGNNFVNLPASIHLLSKLKRINVENCKRLQQLP----ELPATD 868

Query: 358 SIEI--SNCSNLKGFPEIP 374
            + +   NC++L+ FP+ P
Sbjct: 869 ELRVVTDNCTSLQVFPDPP 887



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 217/522 (41%), Gaps = 88/522 (16%)

Query: 303  LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
            LGNL++++  + D   +   P+  G +  L KL L+ C  L  I  SI  LK ++     
Sbjct: 626  LGNLKSID--LSDSINLTRTPDFTG-IPNLEKLILEGCISLVKIHPSIASLKRLKIWNFR 682

Query: 363  NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
            NC ++K  P      ++   +E        ++ CSKL+ +P  +   K+L+ L  I    
Sbjct: 683  NCKSIKSLPS----EVNMEFLE-----TFDVSGCSKLKMIPEFVGQTKTLSKL-CIGGSA 732

Query: 423  LERLPDELGNL-EALEELRVEGTGIREVPKSL---AQLALSKLKL---KKCSSFESLPSR 475
            +E LP     L E+L EL + G  IRE P SL     L +S   L   K       L + 
Sbjct: 733  VENLPSSFERLSESLVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPLLAS 792

Query: 476  LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
            L    SLT L++ DC           NL        +G    E+P  +G LSSLE L L 
Sbjct: 793  LKHFSSLTQLKLNDC-----------NL-------CEG----EIPNDIGYLSSLELLQLI 830

Query: 536  DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY-------LDLFEN--NL 585
             NN   +P S++ LS L  + + N   L+++PE L     L+        L +F +  NL
Sbjct: 831  GNNFVNLPASIHLLSKLKRINVENCKRLQQLPE-LPATDELRVVTDNCTSLQVFPDPPNL 889

Query: 586  DRIPEY-------LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG 638
             R PE+        R+        F   RL   L          L   +        VN 
Sbjct: 890  SRCPEFWLSGINCFRAVGNQGFRYFLYSRLKQLLEVLSLSLCLSLPPSLPPL-SLSLVNM 948

Query: 639  ETYITK----SMYF-----PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
               + +    S+Y+     PG+EIP+WF +QS G ++  K P     +K +G A C ++ 
Sbjct: 949  MVCMVQETPWSLYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACNSKWIGVALCFLIV 1008

Query: 690  CSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV-------FL 742
               +     E    D    +F    ++   G+    S  + ++  + SDH+       F+
Sbjct: 1009 PQDNPSAVPEVRHLDPFTRVF-CCWNKNCSGH----SRLVTRVKQIVSDHLLFVVLPKFI 1063

Query: 743  GSSIFAGENSCKRSDEFFFHIDRSC-----CEVKKCGIHFVH 779
                   E++C    +F F +D++       +VKKCG   ++
Sbjct: 1064 WKPQNCPEDTCTEI-KFVFVVDQTVGNSRGLQVKKCGARILY 1104


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 225/491 (45%), Gaps = 71/491 (14%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYI--SSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
            +++L +G+    +L KL+  + S  +Y+  + +   + ++E ++++ C+ L+     P  
Sbjct: 593  VKQLWKGI---KVLDKLKFMDLSHSKYLVETPNFSGISNLEKLDLTGCTYLREVH--PTL 647

Query: 377  NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             + G        S L L  C  L+++P+S+C  KSL +     C K+E  P+  GNLE L
Sbjct: 648  GVLGK------LSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFGNLEQL 701

Query: 437  EELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
            +EL  + T I  +P S+  L  L  L    C   +  PS  ++  +L   +  +   F+ 
Sbjct: 702  KELYADETAISALPSSICHLRILQVLSFNGC---KGPPSASWL--TLLPRKSSNSGKFLL 756

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPE--SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLV 553
             P  +  L  LK L ++   I E  +   L  LSSLE+L LS NN   +P S++QLS LV
Sbjct: 757  SP--LSGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLV 814

Query: 554  SLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDL 612
            SLKL   N  R+    +  SS+K +D     +L+ I         S  S F SLR  V  
Sbjct: 815  SLKL--QNCRRLQALSELPSSIKEIDAHNCMSLETI---------SNRSLFPSLR-HVSF 862

Query: 613  RNCLKLDP--NELSEIIKD-GWMKQSVNGETY---------ITKSMYFPGNEIPKWFRHQ 660
              CLK+    N +  +++      Q+     Y         I  S   PG+EIP WF +Q
Sbjct: 863  GECLKIKTYQNNIGSMLQALATFLQTHKRSRYARDNPESVTIEFSTVVPGSEIPDWFSYQ 922

Query: 661  STGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVED-DRKCNLFDVVCDRRS 718
            S+G+ ++++ P P  +N   +GFA   V           + + D +    +F + C    
Sbjct: 923  SSGNVVNIELP-PNWFNSNFLGFALSAVFG--------FDPLPDYNPNHKVFCLFC---I 970

Query: 719  EGYDSYTSSYLGKISH-------VESDHVFLGSSIFAGENSCKRSDEF--FFHIDRSCCE 769
              + +  +SY   + H       +ESDH++LG +           + F   F I      
Sbjct: 971  FSFQNSAASYRDNVFHYNSGPALIESDHLWLGYAPVVSSFKWHEVNHFKAAFQIYGRHFV 1030

Query: 770  VKKCGIHFVHA 780
            VK+CGIH V++
Sbjct: 1031 VKRCGIHLVYS 1041



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 188/449 (41%), Gaps = 121/449 (26%)

Query: 7   EIQINPYTFSKMTELRLLKF----------CGSKNKCMVHSLEGVPFTELRYFEWHQFPL 56
           EI      F+ M +LRLLKF          C SK KC +                H F  
Sbjct: 536 EIHFTTKAFAGMDKLRLLKFYDYSPSTNSECTSKRKCKLP---------------HDFSP 580

Query: 57  KTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           K        NLV L +  S V QLW  ++ L  LK +DL +SK L + P+ S   NLE L
Sbjct: 581 K--------NLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNLEKL 632

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP 175
           DL  C+ L E H ++  L KL  L L  CK L ++P SI   K L+  +  GCS ++N P
Sbjct: 633 DLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFP 692

Query: 176 K-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
           +   +      L      I  LPSSI             C                  +R
Sbjct: 693 ENFGNLEQLKELYADETAISALPSSI-------------CH-----------------LR 722

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           I     LQ L    C        + P S   L   PR  S  SG+ +   L+        
Sbjct: 723 I-----LQVLSFNGC--------KGPPSASWLTLLPRKSS-NSGKFLLSPLSG------- 761

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRE--LPEG--LGQLALLSKLELKNCSELEYIS--S 348
                   LG+L+ LN        +R+  + EG  L  LA+LS LE  + S   +IS  S
Sbjct: 762 --------LGSLKELN--------LRDCNISEGADLSHLAILSSLEYLDLSGNNFISLPS 805

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           S+ +L  + S+++ NC  L+   E+P      S I+ I +     + C  LE++ S+  +
Sbjct: 806 SMSQLSQLVSLKLQNCRRLQALSELP------SSIKEIDA-----HNCMSLETI-SNRSL 853

Query: 409 FKSLTSLEIIDCKKLERLPDELGN-LEAL 436
           F SL  +   +C K++   + +G+ L+AL
Sbjct: 854 FPSLRHVSFGECLKIKTYQNNIGSMLQAL 882



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 48/242 (19%)

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +++ PNF  +     NL+ L+  +   T +RE+   LG L  LS L L++C  L+ I +S
Sbjct: 617 LVETPNFSGI----SNLEKLD--LTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNS 670

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNI--------DGSGIERIPSS--------VLKL 393
           I KLKS+E+   S CS ++ FPE  F N+        D + I  +PSS        VL  
Sbjct: 671 ICKLKSLETFIFSGCSKVENFPE-NFGNLEQLKELYADETAISALPSSICHLRILQVLSF 729

Query: 394 NKC------SKLESLP-----------SSLCMFKSLTSLEIIDCKKLERLP-DELGNLEA 435
           N C      S L  LP           S L    SL  L + DC   E      L  L +
Sbjct: 730 NGCKGPPSASWLTLLPRKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSS 789

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           LE L + G     +P S++QL+ L  LKL+ C   ++L      S+  +S++ ID  N M
Sbjct: 790 LEYLDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQAL------SELPSSIKEIDAHNCM 843

Query: 495 RL 496
            L
Sbjct: 844 SL 845



 Score = 42.7 bits (99), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 12/144 (8%)

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD--EIGNLEYLK 507
           PK+L  L+LS      CS  + L   + V   L  +++   K  +  P+   I NLE L 
Sbjct: 580 PKNLVDLSLS------CSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNLEKLD 633

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
           +     T +REV  +LG L  L +L L D   L+ IP S+ +L SL +   S  + +E  
Sbjct: 634 LTGC--TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENF 691

Query: 566 PERLDPLSSLKYLDLFENNLDRIP 589
           PE    L  LK L   E  +  +P
Sbjct: 692 PENFGNLEQLKELYADETAISALP 715


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1915

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 11/244 (4%)

Query: 378  IDGSGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            + GS I  +P          L L +C  LESLPS++C  KSLT+L    C +L   P+  
Sbjct: 1322 LKGSAINELPFIESPFELGSLCLRECKNLESLPSTICELKSLTTLSCSGCSQLTIFPEIF 1381

Query: 431  GNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
              LE L EL +EGT I E+P S+  L  L  L L  C++  SLP  +Y  KSL  L    
Sbjct: 1382 ETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTG 1441

Query: 490  CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQ 548
            C      P+ + N+E L+ L++ GTAI+E+P S+ +L  L+ L LS+ +NL  +PES+  
Sbjct: 1442 CSQLKSFPEILENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESICN 1501

Query: 549  LSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
            L  L +L ++  + LE+ P+ L  L  L+ L    ++ +R+   ++S    + S + +L 
Sbjct: 1502 LRFLKNLNVNLCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAIQSDDCRM-SSWKALN 1560

Query: 608  LSVD 611
            LS++
Sbjct: 1561 LSIN 1564



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 261/598 (43%), Gaps = 97/598 (16%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKN-KCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LH 63
            +++Q +  +F+KM  LRL      +   C     E  P ++LRY  ++   L++L    +
Sbjct: 538  NKMQFSTNSFTKMNRLRLFIVYNKRYWNCFKGDFE-FPSSQLRYLNFYGCSLESLPTNFN 596

Query: 64   WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
              NLV L +  S + +LW   +   SLK I+L YSK L ++PD S   NLEIL+L  C+S
Sbjct: 597  GRNLVELDLVRSGIKKLWKGDEIFNSLKVINLGYSKYLVEIPDFSSVPNLEILNLEGCTS 656

Query: 124  LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK------ 176
            L       + ++KL  ++L    ++  +P+SI H   L+   L GC NL +LP+      
Sbjct: 657  LESFPKIKENMSKLREINLSG-TAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLS 715

Query: 177  ------MTSCHLRSTLP-------------LLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
                  + SC      P             L    IEEL SS+  L  +  L +  CK L
Sbjct: 716  SLQTLYLDSCSKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNL 775

Query: 218  ENISSSIFKLQFLESIRIHRCPNLQ-FLEMPS-------CNIDGTRSKEQPSS------- 262
             N+  SIF +  LE++    C  ++ F E+ +        ++  T  +E P S       
Sbjct: 776  VNLPESIFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEELPYSIGYLKAL 835

Query: 263  -ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
             +L L  C    +LP   C   SL  L + +CP  +RL   L +   + R +     I  
Sbjct: 836  KDLDLSYCHNLVNLPESICNLSSLEKLRVRNCPKLQRLEVNLEDGSHILRSLNTTCCI-- 893

Query: 322  LPEGL----GQLALLSKLELKNCSEL--EYISSSIFKLKSVESIEISNCSNLKG------ 369
            + +G+    G+ + L  L L+ CS++  E ++  I+ L S+  + I N S+L G      
Sbjct: 894  IKQGVIWSNGRFSSLETLHLR-CSQMEGEILNHHIWSLSSLVELCIRN-SDLTGRGILSD 951

Query: 370  --FPE----IPFCNID---------------GSGIERIPSSV--------LKLNKCSKLE 400
              +P     +   N +                 GI+ I + +        L LN C+ +E
Sbjct: 952  SFYPSSLVGLSVGNFNLMEVGDKGESNDSPLSVGIQGILNDIWNLSSLVKLSLNNCNLME 1011

Query: 401  -SLPSSLCMFKSLTSLEIIDCK-KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA- 457
              + S +    SL  L + +C  K   + + + +L +LEEL ++G     +P  +  L+ 
Sbjct: 1012 VGILSDIWNLSSLVKLSLNNCNLKEGEILNRICHLPSLEELSLDGNHFSSIPAGIRLLSN 1071

Query: 458  LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
            L  L L+ C   + +P    +  SL  L +  CK    +P+   NL  L + +  G +
Sbjct: 1072 LRALNLRHCKKLQEIPE---LPSSLRDLYLSHCKKLRAIPELPSNLLLLDMHSSDGIS 1126



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 193/403 (47%), Gaps = 55/403 (13%)

Query: 311  RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
            +L + G+AI ELP       L S L L+ C  LE + S+I +LKS+ ++  S CS L  F
Sbjct: 1319 KLCLKGSAINELPFIESPFELGS-LCLRECKNLESLPSTICELKSLTTLSCSGCSQLTIF 1377

Query: 371  PEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSL 415
            PEI          +++G+ IE +PSS+        L L  C+ L SLP ++   KSL  L
Sbjct: 1378 PEIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFL 1437

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
                C +L+  P+ L N+E L EL + GT I+E+P S+ +L  L  L L  CS+  +LP 
Sbjct: 1438 SCTGCSQLKSFPEILENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPE 1497

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG----QLSSLE 530
             +   + L +L +  C    + P  +G+L+ L++L   G+    V  ++     ++SS +
Sbjct: 1498 SICNLRFLKNLNVNLCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAIQSDDCRMSSWK 1557

Query: 531  WLVLSDNNL-QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRI 588
             L LS N    IIP S+ QLS L  L LS+   L +IPE L P  SL+ LD+        
Sbjct: 1558 ALNLSINYFSSIIPISIIQLSKLRVLDLSHCQKLLQIPE-LPP--SLRILDVHA-----C 1609

Query: 589  P--EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
            P  E L S P+S+        L   L  C K    E        W K+           +
Sbjct: 1610 PCLETLSS-PSSL--------LGFSLFRCFKSAIEEFE--CGSYWSKEI---------QI 1649

Query: 647  YFPGNE-IPKWFRHQSTGSTISLKTPQPTGYNK-LMGFAFCVV 687
              PGN  IP+W   +  GS I+++ P    +N   +G A   V
Sbjct: 1650 VIPGNNGIPEWISQRKKGSEITIELPMDWYHNNDFLGVALYSV 1692



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 17/200 (8%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L++C   ESLPS  C  KSLT+L    C      P+    L+ L  L ++GTAI ELP  
Sbjct: 1344 LRECKNLESLPSTICELKSLTTLSCSGCSQLTIFPEIFETLENLRELHLEGTAIEELPSS 1403

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID------ 379
            +  L  L  L L  C+ L  +  +I++LKS+  +  + CS LK FPEI   NI+      
Sbjct: 1404 IQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEI-LENIENLRELS 1462

Query: 380  --GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
              G+ I+ +P+S+        L L+ CS L +LP S+C  + L +L +  C KLE+ P  
Sbjct: 1463 LHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQN 1522

Query: 430  LGNLEALEELRVEGTGIREV 449
            LG+L+ LE L   G+    V
Sbjct: 1523 LGSLQRLELLGAAGSDSNRV 1542



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 2/158 (1%)

Query: 434  EALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
            E  ++L ++G+ I E+P   +   L  L L++C + ESLPS +   KSLT+L    C   
Sbjct: 1315 ECQQKLCLKGSAINELPFIESPFELGSLCLRECKNLESLPSTICELKSLTTLSCSGCSQL 1374

Query: 494  MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL 552
               P+    LE L+ L ++GTAI E+P S+  L  L++L L+  NNL  +PE++ +L SL
Sbjct: 1375 TIFPEIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSL 1434

Query: 553  VSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            V L  +  + L+  PE L+ + +L+ L L    +  +P
Sbjct: 1435 VFLSCTGCSQLKSFPEILENIENLRELSLHGTAIKELP 1472



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 125/255 (49%), Gaps = 47/255 (18%)

Query: 409 FKSLTSLEIID---CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLK 464
           F S+ +LEI++   C  LE  P    N+  L E+ + GT I EVP S+  L  L    L 
Sbjct: 640 FSSVPNLEILNLEGCTSLESFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLS 699

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDC---KNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
            C +  SLP  +    SL +L +  C   K F  + D +GNLE L    ++ TAI E+  
Sbjct: 700 GCFNLVSLPRSICNLSSLQTLYLDSCSKLKGFPEMKDNMGNLERL---NLRFTAIEELSS 756

Query: 522 SLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL------------KLSNN--NLERI- 565
           S+G L +L+ L LS   NL  +PES+  +SSL +L            ++ NN  NLER+ 
Sbjct: 757 SVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLD 816

Query: 566 ---------PERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
                    P  +  L +LK LDL + +NL  +PE + +      S    LR    +RNC
Sbjct: 817 LSFTAIEELPYSIGYLKALKDLDLSYCHNLVNLPESICNL-----SSLEKLR----VRNC 867

Query: 616 LKLDPNELSEIIKDG 630
            KL   E++  ++DG
Sbjct: 868 PKLQRLEVN--LEDG 880



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 4/124 (3%)

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSC 180
            +++ E  SSIQ+L  L+ L+L  C +L SLP +I+  K L  L   GCS LK+ P++   
Sbjct: 1395 TAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILEN 1454

Query: 181  --HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
              +LR  L L G  I+ELP+SI+ L  + +L + +C  L N+  SI  L+FL+++ ++ C
Sbjct: 1455 IENLRE-LSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLC 1513

Query: 239  PNLQ 242
              L+
Sbjct: 1514 SKLE 1517



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 209/496 (42%), Gaps = 84/496 (16%)

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
            NL  L +  + + +L   V +L +LK +DL + K L  LP+ +    +LE L+   C  +
Sbjct: 740  NLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNGSMCLKI 799

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
             +       +  LE LDL    ++  LP SI + K LK L L  C NL NLP+ + C+L 
Sbjct: 800  KDFPEIKNNMGNLERLDLS-FTAIEELPYSIGYLKALKDLDLSYCHNLVNLPE-SICNLS 857

Query: 184  S----------TLPLLGVGIEELPSSIKCLSN----IGELLIYSCKRLENISSSIFKLQF 229
            S           L  L V +E+    ++ L+     I + +I+S  R  ++ +   +   
Sbjct: 858  SLEKLRVRNCPKLQRLEVNLEDGSHILRSLNTTCCIIKQGVIWSNGRFSSLETLHLRCSQ 917

Query: 230  LES-IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL--T 286
            +E  I  H   +L  L                     ++ C R   L     +  S   +
Sbjct: 918  MEGEILNHHIWSLSSL---------------------VELCIRNSDLTGRGILSDSFYPS 956

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY- 345
            SL  +   NF  +  E+G+    N   +    I+ +   +  L+ L KL L NC+ +E  
Sbjct: 957  SLVGLSVGNFNLM--EVGDKGESNDSPL-SVGIQGILNDIWNLSSLVKLSLNNCNLMEVG 1013

Query: 346  ISSSIFKLKSVESIEISNCSNLKG--------FPEIPFCNIDGSGIERIPSSV------- 390
            I S I+ L S+  + ++NC+  +G         P +   ++DG+    IP+ +       
Sbjct: 1014 ILSDIWNLSSLVKLSLNNCNLKEGEILNRICHLPSLEELSLDGNHFSSIPAGIRLLSNLR 1073

Query: 391  -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
             L L  C KL+ +P    +  SL  L +  CKKL  +P+   NL  L+    +G      
Sbjct: 1074 ALNLRHCKKLQEIPE---LPSSLRDLYLSHCKKLRAIPELPSNLLLLDMHSSDGIS---- 1126

Query: 450  PKSLAQLALSKLKLKKCSSFESLPSRLY--VSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
                   +LS   L  C     L S+LY  +  SL + E  D    + +P   G LE  +
Sbjct: 1127 -------SLSNHSLLNC-----LKSKLYQELQISLGASEFRDMAMEIVIPRSSGILEGTR 1174

Query: 508  VLTIKGTAIR-EVPES 522
              ++    +R E+P++
Sbjct: 1175 NQSMGSHQVRIELPQN 1190


>gi|297840621|ref|XP_002888192.1| hypothetical protein ARALYDRAFT_893604 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334033|gb|EFH64451.1| hypothetical protein ARALYDRAFT_893604 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 760

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 131/239 (54%), Gaps = 9/239 (3%)

Query: 9   QINPYTFSKMTELRLLK--FCGSKNKCMVHSLEGVPFT---ELRYFEWHQFPLKTL-NIL 62
           +++P  FSKM  LRLLK  F    N+C +   +G+ +T   ELR   W  +PL+ L    
Sbjct: 513 ELSPTMFSKMYRLRLLKLYFSTPGNQCKLSLSQGL-YTLPDELRLLHWENYPLECLPQKF 571

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           + ENLV + MP S + +LW+  +NL  LKRI L +S+ LT +  LS A NLE +DL  C 
Sbjct: 572 NPENLVEVNMPYSNMEKLWEGKKNLEKLKRIKLSHSRNLTDVMVLSEALNLEHIDLEGCI 631

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL +  +SI    KL  L+L  C  L SLP       LK L + GCS  + +      +L
Sbjct: 632 SLVDVSTSIPSCGKLVSLNLKDCSQLQSLPAMFGLISLKLLRMSGCSEFEEIQDFAP-NL 690

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           +  L L G  I+ELP SI+ L+ +  L + +C RL+ + + I  L+ +  +++  C +L
Sbjct: 691 KE-LYLAGTAIKELPLSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSGCTSL 748



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 8/106 (7%)

Query: 264 LKLKKCPRPESLPSGQCMFK--SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
           L LK C + +SLP+   MF   SL  L +  C  FE + D   NL+    L + GTAI+E
Sbjct: 649 LNLKDCSQLQSLPA---MFGLISLKLLRMSGCSEFEEIQDFAPNLK---ELYLAGTAIKE 702

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           LP  +  L  L  L+L+NC+ L+ + + I  L+S+  +++S C++L
Sbjct: 703 LPLSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSGCTSL 748



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 37/173 (21%)

Query: 295 NFERLPDELGNLQALNRLIIDG----TAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           N E+L +   NL+ L R+ +      T +  L E L     L  ++L+ C  L  +S+SI
Sbjct: 585 NMEKLWEGKKNLEKLKRIKLSHSRNLTDVMVLSEALN----LEHIDLEGCISLVDVSTSI 640

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES--------- 401
                + S+ + +CS L+  P +            I   +L+++ CS+ E          
Sbjct: 641 PSCGKLVSLNLKDCSQLQSLPAM---------FGLISLKLLRMSGCSEFEEIQDFAPNLK 691

Query: 402 -----------LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                      LP S+     L +L++ +C +L++LP+ + NL ++ EL++ G
Sbjct: 692 ELYLAGTAIKELPLSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSG 744



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 44/199 (22%)

Query: 319 IRELPEGLGQLALLSKLEL---KNCSELEYISSSIFKLKSVESIEISNCSNLKGF-PEIP 374
           + +L EG   L  L +++L   +N +++  +S ++    ++E I++  C +L      IP
Sbjct: 586 MEKLWEGKKNLEKLKRIKLSHSRNLTDVMVLSEAL----NLEHIDLEGCISLVDVSTSIP 641

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
            C        ++ S  L L  CS+L+SLP+   +  SL  L +  C + E + D   NL+
Sbjct: 642 SCG-------KLVS--LNLKDCSQLQSLPAMFGLI-SLKLLRMSGCSEFEEIQDFAPNLK 691

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
              EL + GT I+E+P S+  L                         L +L++ +C    
Sbjct: 692 ---ELYLAGTAIKELPLSIENLT-----------------------ELITLDLENCTRLQ 725

Query: 495 RLPDEIGNLEYLKVLTIKG 513
           +LP+ I NL  +  L + G
Sbjct: 726 KLPNGISNLRSMVELKLSG 744



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 28/179 (15%)

Query: 423 LERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
           +E+L +   NLE L+ +++  +  + +V      L L  + L+ C S   + + +     
Sbjct: 586 MEKLWEGKKNLEKLKRIKLSHSRNLTDVMVLSEALNLEHIDLEGCISLVDVSTSIPSCGK 645

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEY--------------------LKVLTIKGTAIREVPE 521
           L SL + DC     LP   G +                      LK L + GTAI+E+P 
Sbjct: 646 LVSLNLKDCSQLQSLPAMFGLISLKLLRMSGCSEFEEIQDFAPNLKELYLAGTAIKELPL 705

Query: 522 SLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           S+  L+ L  L L +   LQ +P  ++ L S+V LKLS          LDP S    LD
Sbjct: 706 SIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSGCT------SLDPRSMEATLD 758



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 13/105 (12%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF----PEIPFCNIDGSGIERIP 387
           L  L LK+CS+L+ + + +F L S++ + +S CS  +      P +    + G+ I+ +P
Sbjct: 646 LVSLNLKDCSQLQSLPA-MFGLISLKLLRMSGCSEFEEIQDFAPNLKELYLAGTAIKELP 704

Query: 388 SSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
            S+        L L  C++L+ LP+ +   +S+  L++  C  L+
Sbjct: 705 LSIENLTELITLDLENCTRLQKLPNGISNLRSMVELKLSGCTSLD 749


>gi|30681996|ref|NP_192939.2| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657684|gb|AEE83084.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1798

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 142/253 (56%), Gaps = 17/253 (6%)

Query: 4    INSEIQINPYTFSKMTELRLLKFCGSKNK-----CMVHSLEGVPFTELRYFEWHQFPLKT 58
            +N +   NP  F KM  LRLLK   SK +          LE +P ++LR   W  +PL +
Sbjct: 1161 LNLKFDANPNVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLP-SKLRLLHWEYYPLSS 1219

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQ--------NLVSLKRIDLKYSKLLTKLPDLSL 109
            L    + ENLV L +P S   +LW   +        +L  LK++ L YS  LTK+P LS 
Sbjct: 1220 LPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSS 1279

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
            A NLE +DL  C+SL     SI YL KL  L+L  C  L ++P+ +  + L+ L L GCS
Sbjct: 1280 ATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCS 1339

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
             L N P++ S +++  L + G  I+E+PSSIK L  + +L + + + L+N+ +SI+KL+ 
Sbjct: 1340 KLGNFPEI-SPNVKE-LYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH 1397

Query: 230  LESIRIHRCPNLQ 242
            LE++ +  C +L+
Sbjct: 1398 LETLNLSGCISLE 1410



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  CSKLE++PS +   +SL  L +  C KL   P+   N++   EL + GT I+E+P
Sbjct: 1310 LNLKGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIP 1365

Query: 451  KSLAQLAL-SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+  L L  KL L+     ++LP+ +Y  K L +L +  C +  R PD    ++ L+ L
Sbjct: 1366 SSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFL 1425

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDN 537
             +  T I+E+P S+  L++L+ L+  D+
Sbjct: 1426 DLSRTDIKELPSSISYLTALDELLFVDS 1453



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 50/305 (16%)

Query: 112  NLEILDLGYCSSLTETHS-----SIQYL-NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            NL +L L YCS   E H       ++YL +KL +L  +    L+SLP S + + L  L  
Sbjct: 1177 NLRLLKL-YCSKAEEKHGVSFPQGLEYLPSKLRLLHWEY-YPLSSLPKSFNPENLVEL-- 1232

Query: 166  RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
                   NLP  +SC  +         + +   +  C +N       S ++L+ +  S +
Sbjct: 1233 -------NLP--SSCAKK---------LWKGKKARFCTTN------SSLEKLKKMRLS-Y 1267

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKCPRPESLPSGQCM 281
              Q  +  R+    NL+ +++  CN   + S+     +    L LK C + E++PS    
Sbjct: 1268 SDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPS-MVD 1326

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             +SL  L +  C      P+   N++    L + GT I+E+P  +  L LL KL+L+N  
Sbjct: 1327 LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSR 1383

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
             L+ + +SI+KLK +E++ +S C +L+ FP+       + F ++  + I+ +PSS+  L 
Sbjct: 1384 HLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLT 1443

Query: 395  KCSKL 399
               +L
Sbjct: 1444 ALDEL 1448



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            L LK CS  E++PS + + +SL  L +  C      P+   N+   K L + GT I+E+P
Sbjct: 1310 LNLKGCSKLENIPSMVDL-ESLEVLNLSGCSKLGNFPEISPNV---KELYMGGTMIQEIP 1365

Query: 521  ESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
             S+  L  LE L L ++ +L+ +P S+ +L  L +L LS   +LER P+    +  L++L
Sbjct: 1366 SSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFL 1425

Query: 579  DLFENNLDRIP 589
            DL   ++  +P
Sbjct: 1426 DLSRTDIKELP 1436


>gi|238480299|ref|NP_001154222.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657686|gb|AEE83086.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1879

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 142/253 (56%), Gaps = 17/253 (6%)

Query: 4    INSEIQINPYTFSKMTELRLLKFCGSKNK-----CMVHSLEGVPFTELRYFEWHQFPLKT 58
            +N +   NP  F KM  LRLLK   SK +          LE +P ++LR   W  +PL +
Sbjct: 1161 LNLKFDANPNVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLP-SKLRLLHWEYYPLSS 1219

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQ--------NLVSLKRIDLKYSKLLTKLPDLSL 109
            L    + ENLV L +P S   +LW   +        +L  LK++ L YS  LTK+P LS 
Sbjct: 1220 LPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSS 1279

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
            A NLE +DL  C+SL     SI YL KL  L+L  C  L ++P+ +  + L+ L L GCS
Sbjct: 1280 ATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCS 1339

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
             L N P++ S +++  L + G  I+E+PSSIK L  + +L + + + L+N+ +SI+KL+ 
Sbjct: 1340 KLGNFPEI-SPNVKE-LYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH 1397

Query: 230  LESIRIHRCPNLQ 242
            LE++ +  C +L+
Sbjct: 1398 LETLNLSGCISLE 1410



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  CSKLE++PS +   +SL  L +  C KL   P+   N++   EL + GT I+E+P
Sbjct: 1310 LNLKGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIP 1365

Query: 451  KSLAQLAL-SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+  L L  KL L+     ++LP+ +Y  K L +L +  C +  R PD    ++ L+ L
Sbjct: 1366 SSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFL 1425

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDN 537
             +  T I+E+P S+  L++L+ L+  D+
Sbjct: 1426 DLSRTDIKELPSSISYLTALDELLFVDS 1453



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 50/305 (16%)

Query: 112  NLEILDLGYCSSLTETHS-----SIQYL-NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            NL +L L YCS   E H       ++YL +KL +L  +    L+SLP S + + L  L  
Sbjct: 1177 NLRLLKL-YCSKAEEKHGVSFPQGLEYLPSKLRLLHWEY-YPLSSLPKSFNPENLVEL-- 1232

Query: 166  RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
                   NLP  +SC  +         + +   +  C +N       S ++L+ +  S +
Sbjct: 1233 -------NLP--SSCAKK---------LWKGKKARFCTTN------SSLEKLKKMRLS-Y 1267

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKCPRPESLPSGQCM 281
              Q  +  R+    NL+ +++  CN   + S+     +    L LK C + E++PS    
Sbjct: 1268 SDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPS-MVD 1326

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             +SL  L +  C      P+   N++    L + GT I+E+P  +  L LL KL+L+N  
Sbjct: 1327 LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSR 1383

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
             L+ + +SI+KLK +E++ +S C +L+ FP+       + F ++  + I+ +PSS+  L 
Sbjct: 1384 HLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLT 1443

Query: 395  KCSKL 399
               +L
Sbjct: 1444 ALDEL 1448



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            L LK CS  E++PS + + +SL  L +  C      P+   N+   K L + GT I+E+P
Sbjct: 1310 LNLKGCSKLENIPSMVDL-ESLEVLNLSGCSKLGNFPEISPNV---KELYMGGTMIQEIP 1365

Query: 521  ESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
             S+  L  LE L L ++ +L+ +P S+ +L  L +L LS   +LER P+    +  L++L
Sbjct: 1366 SSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFL 1425

Query: 579  DLFENNLDRIP 589
            DL   ++  +P
Sbjct: 1426 DLSRTDIKELP 1436


>gi|224171160|ref|XP_002339466.1| predicted protein [Populus trichocarpa]
 gi|222875162|gb|EEF12293.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 43/292 (14%)

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-- 374
           TAI+ELP+ +G  + L  L L+   +L  + +SI  LKS+  +++S CSN+  FP IP  
Sbjct: 17  TAIKELPQSIGHRSRLVALNLREFKQLGNLPNSICLLKSIVIVDVSGCSNVTKFPNIPGN 76

Query: 375 --FCNIDGSGIERIPSSV-------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
             +  + G+ +E  PSSV       L L+ C +L++LPS++     L  L +  C  +  
Sbjct: 77  TRYLYLSGTAVEEFPSSVGHLWRISLDLSNCGRLKNLPSTIYELAYLEKLNLSGCSSITE 136

Query: 426 LPDELGNLEALEELRVEGT------------GIREVPKSLAQLALSKLKLKKCSSFESLP 473
            P+   N   ++EL ++GT            GI E  +SL  L L +  ++K SS    P
Sbjct: 137 FPNISWN---IKELYLDGTTIEEIIVNRRFPGILETMESLRYLYLDRTGIRKLSS----P 189

Query: 474 SRLYVSKSLTSLEIIDCKNF-------MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
            R    K L  L + +CK         +RL ++  +L+YL+ L + G  I EVP+SLG L
Sbjct: 190 IR--NLKGLCCLALGNCKYLEGKYLGDLRLLEQDVDLKYLRKLNLSGCGILEVPKSLGCL 247

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSS 574
           +SLE L LS NN   +P ++++L  L  L L       +L+++P RL  L +
Sbjct: 248 TSLEALDLSGNNFVRLPTNISELYELQYLGLRYCRRLGSLQKLPPRLAKLDA 299



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 55/269 (20%)

Query: 370 FPE----IPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEI 417
           +PE    + + N + + I+ +P S+        L L +  +L +LP+S+C+ KS+  +++
Sbjct: 2   YPETTEHVMYLNFNETAIKELPQSIGHRSRLVALNLREFKQLGNLPNSICLLKSIVIVDV 61

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
             C  + + P+  GN   L    + GT + E P S+  L    L L  C   ++LPS +Y
Sbjct: 62  SGCSNVTKFPNIPGNTRYL---YLSGTAVEEFPSSVGHLWRISLDLSNCGRLKNLPSTIY 118

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV------PESLGQLSSLEW 531
               L  L +  C +    P+   N+   K L + GT I E+      P  L  + SL +
Sbjct: 119 ELAYLEKLNLSGCSSITEFPNISWNI---KELYLDGTTIEEIIVNRRFPGILETMESLRY 175

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNN------------------------------- 560
           L L    ++ +   +  L  L  L L N                                
Sbjct: 176 LYLDRTGIRKLSSPIRNLKGLCCLALGNCKYLEGKYLGDLRLLEQDVDLKYLRKLNLSGC 235

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIP 589
            +  +P+ L  L+SL+ LDL  NN  R+P
Sbjct: 236 GILEVPKSLGCLTSLEALDLSGNNFVRLP 264



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 138/337 (40%), Gaps = 108/337 (32%)

Query: 250 NIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           N + T  KE P S         L L++  +  +LP+  C+ KS+  +++  C N  + P+
Sbjct: 13  NFNETAIKELPQSIGHRSRLVALNLREFKQLGNLPNSICLLKSIVIVDVSGCSNVTKFPN 72

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLG-----------------------QLALLSKLELK 338
             GN + L    + GTA+ E P  +G                       +LA L KL L 
Sbjct: 73  IPGNTRYL---YLSGTAVEEFPSSVGHLWRISLDLSNCGRLKNLPSTIYELAYLEKLNLS 129

Query: 339 NCS---ELEYISSSIFKL----KSVESIEISNCSNLKGFPEI-------PFCNIDGSGIE 384
            CS   E   IS +I +L     ++E I ++     + FP I        +  +D +GI 
Sbjct: 130 GCSSITEFPNISWNIKELYLDGTTIEEIIVN-----RRFPGILETMESLRYLYLDRTGIR 184

Query: 385 RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE-------RLPDELGNLEALE 437
           ++ S +  L                K L  L + +CK LE       RL ++  +L+ L 
Sbjct: 185 KLSSPIRNL----------------KGLCCLALGNCKYLEGKYLGDLRLLEQDVDLKYLR 228

Query: 438 ELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC--KNFMR 495
           +L + G GI EVPKSL                            LTSLE +D    NF+R
Sbjct: 229 KLNLSGCGILEVPKSLG--------------------------CLTSLEALDLSGNNFVR 262

Query: 496 LPDEIGNLEYLKVLTIKG----TAIREVPESLGQLSS 528
           LP  I  L  L+ L ++      +++++P  L +L +
Sbjct: 263 LPTNISELYELQYLGLRYCRRLGSLQKLPPRLAKLDA 299


>gi|342365842|gb|AEL30375.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 932

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 126/237 (53%), Gaps = 9/237 (3%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNIL--HW 64
           E+  N   FS + +L+LL   G K+  + +    +P T LR   W+  P++TL     H+
Sbjct: 525 ELYWNDLAFSNICQLKLLILDGVKSPILCN----IPCT-LRVLHWNGCPMETLPFTDEHY 579

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E LV + +  SK+  +W   + L  LK ++L  S  L + PDLS A NLE LDL  CS L
Sbjct: 580 E-LVEIDLYLSKIVHVWHGKKFLEKLKYLNLSNSHNLKQTPDLSGAPNLETLDLSCCSEL 638

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR- 183
            + H S+ +   L  L+L +C SL +L   +    LK L L  C++L+ LPK   C  R 
Sbjct: 639 NDIHQSLIHHKNLLELNLIKCGSLQTLGDKLEMSSLKELDLYECNSLRKLPKFGECMKRL 698

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           S L L   GI ELP+++  L  + EL +  CKRL  +  +I  L+ L ++ +  CPN
Sbjct: 699 SILTLSCTGITELPTTVGNLVGLSELDLQGCKRLTCLPDTISGLKSLTALDVSDCPN 755



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)

Query: 238 CPNLQFLEMPSC----NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            PNL+ L++  C    +I  +    +   EL L KC   ++L   +    SL  L++ +C
Sbjct: 624 APNLETLDLSCCSELNDIHQSLIHHKNLLELNLIKCGSLQTL-GDKLEMSSLKELDLYEC 682

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
            +  +LP     ++ L+ L +  T I ELP  +G L  LS+L+L+ C  L  +  +I  L
Sbjct: 683 NSLRKLPKFGECMKRLSILTLSCTGITELPTTVGNLVGLSELDLQGCKRLTCLPDTISGL 742

Query: 354 KSVESIEISNCSN 366
           KS+ ++++S+C N
Sbjct: 743 KSLTALDVSDCPN 755



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 35/165 (21%)

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L+ ++ + +SN  NLK  P++       SG   + +  L L+ CS+L  +  SL   K+L
Sbjct: 601 LEKLKYLNLSNSHNLKQTPDL-------SGAPNLET--LDLSCCSELNDIHQSLIHHKNL 651

Query: 413 TSLEIIDCKKLERLPDELGNLEALEE------------------------LRVEGTGIRE 448
             L +I C  L+ L D+L  + +L+E                        L +  TGI E
Sbjct: 652 LELNLIKCGSLQTLGDKL-EMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITE 710

Query: 449 VPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           +P ++  L  LS+L L+ C     LP  +   KSLT+L++ DC N
Sbjct: 711 LPTTVGNLVGLSELDLQGCKRLTCLPDTISGLKSLTALDVSDCPN 755



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 26/256 (10%)

Query: 433 LEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           LE L+ L +  +  +++ P       L  L L  CS    +   L   K+L  L +I C 
Sbjct: 601 LEKLKYLNLSNSHNLKQTPDLSGAPNLETLDLSCCSELNDIHQSLIHHKNLLELNLIKCG 660

Query: 492 NFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
           +   L D++  +  LK L + +  ++R++P+    +  L  L LS   +  +P ++  L 
Sbjct: 661 SLQTLGDKL-EMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELPTTVGNLV 719

Query: 551 SLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS 609
            L  L L     L  +P+ +  L SL  LD+                +  P+       S
Sbjct: 720 GLSELDLQGCKRLTCLPDTISGLKSLTALDV----------------SDCPNLLLQSLDS 763

Query: 610 VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
           +     L L  N+  E         S +G+  +   M   G EIP WF H+  G+ I+  
Sbjct: 764 LSTLTSLLLSWNKCVEACCAFAASASQDGDDVM--QMLVAGEEIPSWFVHREEGNGITAT 821

Query: 670 TPQPTGYNKLMGFAFC 685
            P    + + +  A C
Sbjct: 822 FP----HTETIALAIC 833


>gi|108740465|gb|ABG01588.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS     +        +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPS-----SIGXAIXLQK 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPK-------MTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGXAIXLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 178/392 (45%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGXAIXLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|108740455|gb|ABG01583.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS       L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAIXLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 163/372 (43%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI     +  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAIXLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI     +++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAIXLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAIXLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 242/512 (47%), Gaps = 31/512 (6%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           + ++N + ++ +DL  ++L     ++   QNL+ L L   + L      I+ L KL+ L 
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLA-NNQLKTLPKEIETLQKLKWLY 90

Query: 142 LDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSS 199
           L   + L +LP  I   + L+RL L G + L  +P+ + +      L L    +  LP  
Sbjct: 91  LSENQ-LATLPKEIGKLQRLERLYL-GGNQLTTIPQEIGALQDLEELSLYNNQLITLPQE 148

Query: 200 IKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ 259
           I  L ++ EL + +  +L  +   I  LQ L+ + +    N Q + +P     GT    Q
Sbjct: 149 IGTLQDLEELNL-ANNQLRTLPKEIGTLQHLQDLNVF---NNQLITLPQE--IGTL---Q 199

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
               L+L    +  +LP      ++L  L + +      LP E+G LQ L  L ++   +
Sbjct: 200 NLKYLRLA-YNQLTTLPEEIGRLENLQDLNVFNN-QLVTLPQEIGTLQNLQSLNLENNRL 257

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
             LP+ +G L  L  L L N ++L  +   I KL+ +E + ++N + LK  P+      +
Sbjct: 258 VTLPKEIGALQKLEWLYLTN-NQLATLPQEIGKLQRLEWLGLTN-NQLKSLPQ------E 309

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              ++ +   +L+ N+   LES P  +    +L  L + +  +   LP E+G L  L  L
Sbjct: 310 IGKLQNLKELILENNR---LESFPKEIGTLPNLQRLHL-EYNRFTTLPQEIGTLHRLPWL 365

Query: 440 RVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            +E   +  +P+ + +L  L  L L   +   +LP  +   + L  L + + +    LP 
Sbjct: 366 NLEHNQLTTLPQEIGRLERLEWLNLYN-NRLATLPKEIGTLQKLQHLYLANNQ-LATLPK 423

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           EIG L+ LK L ++   +  +PE++G L  LEWL L +N L  +PE +  L  +V L L+
Sbjct: 424 EIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLA 483

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           NN L  +P+ +  L SLK LDL  N     P+
Sbjct: 484 NNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPK 515



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 163/356 (45%), Gaps = 44/356 (12%)

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    ++ LP+ +  L  L  L L   ++L  +   I KL+ +E +
Sbjct: 54  PREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSE-NQLATLPKEIGKLQRLERL 112

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSL 412
            +                  G+ +  IP  +  L    +L        +LP  +   + L
Sbjct: 113 YLG-----------------GNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDL 155

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESL 472
             L + +  +L  LP E+G L+ L++L V    +  +P+ +  L   K      +   +L
Sbjct: 156 EELNLAN-NQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTL 214

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
           P  +   ++L  L + + +  + LP EIG L+ L+ L ++   +  +P+ +G L  LEWL
Sbjct: 215 PEEIGRLENLQDLNVFNNQ-LVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWL 273

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            L++N L  +P+ + +L  L  L L+NN L+ +P+ +  L +LK L L  N L+  P+ +
Sbjct: 274 YLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEI 333

Query: 593 RSFP------------TSIPSEFTSLR----LSVDLRNCLKLDPNELSEIIKDGWM 632
            + P            T++P E  +L     L+++  N L   P E+  + +  W+
Sbjct: 334 GTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLE-HNQLTTLPQEIGRLERLEWL 388



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 231/501 (46%), Gaps = 37/501 (7%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L  +++ L  LK + L  ++L T   ++   Q LE L LG  + L
Sbjct: 61  QNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLG-GNQL 119

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKM--TSCH 181
           T     I  L  LE L L     L +LP  I + + L+ L L   + L+ LPK   T  H
Sbjct: 120 TTIPQEIGALQDLEELSL-YNNQLITLPQEIGTLQDLEELNL-ANNQLRTLPKEIGTLQH 177

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           L+  L +    +  LP  I  L N+  L + +  +L  +   I +L+ L+ + +    N 
Sbjct: 178 LQD-LNVFNNQLITLPQEIGTLQNLKYLRL-AYNQLTTLPEEIGRLENLQDLNVF---NN 232

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           Q + +P     GT    Q    L L+   R  +LP      + L  L + +      LP 
Sbjct: 233 QLVTLPQE--IGTLQNLQ---SLNLENN-RLVTLPKEIGALQKLEWLYLTNN-QLATLPQ 285

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           E+G LQ L  L +    ++ LP+ +G+L  L +L L+N + LE     I  L +++ + +
Sbjct: 286 EIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILEN-NRLESFPKEIGTLPNLQRLHL 344

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
              +     P+      +   + R+P   L+ N+ +   +LP  +   + L  L + +  
Sbjct: 345 E-YNRFTTLPQ------EIGTLHRLPWLNLEHNQLT---TLPQEIGRLERLEWLNLYN-N 393

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSK 480
           +L  LP E+G L+ L+ L +    +  +PK + QL  L  L L+  +   +LP  +    
Sbjct: 394 RLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLE-YNQLATLPEAI---G 449

Query: 481 SLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
           +L  LE +  KN     LP+EIG L+ +  L +    +R +P+ +GQL SL+ L LS N 
Sbjct: 450 TLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNP 509

Query: 539 LQIIPESLNQLSSLVSLKLSN 559
               P+ +  L  L  LKL N
Sbjct: 510 FTTFPKEIVGLKHLQILKLKN 530



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
           R+  E+L     +  L L +N L I P  +  L +L  L L+NN L+ +P+ ++ L  LK
Sbjct: 28  RDFNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLK 87

Query: 577 YLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLR 607
           +L L EN L  +P+ +                T+IP E  +L+
Sbjct: 88  WLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQ 130


>gi|186511687|ref|NP_001118968.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|29839687|sp|Q9SZ67.1|WRK19_ARATH RecName: Full=Probable WRKY transcription factor 19; AltName:
            Full=WRKY DNA-binding protein 19
 gi|4586107|emb|CAB40943.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7267903|emb|CAB78245.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332657685|gb|AEE83085.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1895

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 142/253 (56%), Gaps = 17/253 (6%)

Query: 4    INSEIQINPYTFSKMTELRLLKFCGSKNK-----CMVHSLEGVPFTELRYFEWHQFPLKT 58
            +N +   NP  F KM  LRLLK   SK +          LE +P ++LR   W  +PL +
Sbjct: 1161 LNLKFDANPNVFEKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLP-SKLRLLHWEYYPLSS 1219

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQ--------NLVSLKRIDLKYSKLLTKLPDLSL 109
            L    + ENLV L +P S   +LW   +        +L  LK++ L YS  LTK+P LS 
Sbjct: 1220 LPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSS 1279

Query: 110  AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
            A NLE +DL  C+SL     SI YL KL  L+L  C  L ++P+ +  + L+ L L GCS
Sbjct: 1280 ATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCS 1339

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
             L N P++ S +++  L + G  I+E+PSSIK L  + +L + + + L+N+ +SI+KL+ 
Sbjct: 1340 KLGNFPEI-SPNVKE-LYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH 1397

Query: 230  LESIRIHRCPNLQ 242
            LE++ +  C +L+
Sbjct: 1398 LETLNLSGCISLE 1410



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  CSKLE++PS +   +SL  L +  C KL   P+   N++   EL + GT I+E+P
Sbjct: 1310 LNLKGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIP 1365

Query: 451  KSLAQLAL-SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             S+  L L  KL L+     ++LP+ +Y  K L +L +  C +  R PD    ++ L+ L
Sbjct: 1366 SSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFL 1425

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDN 537
             +  T I+E+P S+  L++L+ L+  D+
Sbjct: 1426 DLSRTDIKELPSSISYLTALDELLFVDS 1453



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 50/305 (16%)

Query: 112  NLEILDLGYCSSLTETHS-----SIQYL-NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVL 165
            NL +L L YCS   E H       ++YL +KL +L  +    L+SLP S + + L  L  
Sbjct: 1177 NLRLLKL-YCSKAEEKHGVSFPQGLEYLPSKLRLLHWEY-YPLSSLPKSFNPENLVEL-- 1232

Query: 166  RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
                   NLP  +SC  +         + +   +  C +N       S ++L+ +  S +
Sbjct: 1233 -------NLP--SSCAKK---------LWKGKKARFCTTN------SSLEKLKKMRLS-Y 1267

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKCPRPESLPSGQCM 281
              Q  +  R+    NL+ +++  CN   + S+     +    L LK C + E++PS    
Sbjct: 1268 SDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPS-MVD 1326

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             +SL  L +  C      P+   N++    L + GT I+E+P  +  L LL KL+L+N  
Sbjct: 1327 LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSR 1383

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
             L+ + +SI+KLK +E++ +S C +L+ FP+       + F ++  + I+ +PSS+  L 
Sbjct: 1384 HLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLT 1443

Query: 395  KCSKL 399
               +L
Sbjct: 1444 ALDEL 1448



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            L LK CS  E++PS + + +SL  L +  C      P+   N+   K L + GT I+E+P
Sbjct: 1310 LNLKGCSKLENIPSMVDL-ESLEVLNLSGCSKLGNFPEISPNV---KELYMGGTMIQEIP 1365

Query: 521  ESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
             S+  L  LE L L ++ +L+ +P S+ +L  L +L LS   +LER P+    +  L++L
Sbjct: 1366 SSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFL 1425

Query: 579  DLFENNLDRIP 589
            DL   ++  +P
Sbjct: 1426 DLSRTDIKELP 1436


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 161/352 (45%), Gaps = 38/352 (10%)

Query: 14   TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKM 72
              SKM  L+LL F   +      +L  V   +L Y  W  +P   L       NL+ L +
Sbjct: 855  ALSKMKNLKLLMF--PEYTKFSGNLNYVSNNKLGYLIWPYYPFNFLPQCFQPHNLIELDL 912

Query: 73   PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
              S +  LWD  Q +  L+R++L  S L+ KLPD +   NL  L+L  C  L + H SI 
Sbjct: 913  SRSNIQHLWDSTQPIPKLRRLNLSLSALV-KLPDFAEDLNLRQLNLEGCEQLRQIHPSIG 971

Query: 133  YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK-------NLPKMTSCHLRST 185
            +L KLEVL+L  CKSL  LP       L+ L L GC  L+       +L K+   +L+  
Sbjct: 972  HLTKLEVLNLKDCKSLVKLPDFAEDLNLRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDC 1031

Query: 186  LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK--LQFLESIRIHRCPNL-- 241
              L     E LP++I  LS++  L ++ C +L NI SS  +     L+ +RI   P+   
Sbjct: 1032 KSL-----ESLPNNILRLSSLQYLSLFGCSKLYNIRSSEEQRGAGHLKKLRIGEAPSRSQ 1086

Query: 242  -------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
                   + L  PS   D +       S     +C  P SLP   CM      L++  C 
Sbjct: 1087 SIFSFFKKGLPWPSVAFDKSLEDAHKDS----VRCLLP-SLPIFPCM----RELDLSFC- 1136

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            N  ++PD   N Q L  L + G     LP  L +L+ L  L L++C  L+Y+
Sbjct: 1137 NLLKIPDAFVNFQCLEELYLMGNNFETLP-SLKELSKLLHLNLQHCKRLKYL 1187



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 189/484 (39%), Gaps = 84/484 (17%)

Query: 371  PEIPFCNIDGSGIERIPSSV-------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
            P++   N+  S + ++P          L L  C +L  +  S+     L  L + DCK L
Sbjct: 928  PKLRRLNLSLSALVKLPDFAEDLNLRQLNLEGCEQLRQIHPSIGHLTKLEVLNLKDCKSL 987

Query: 424  ERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
             +LPD   +L  L EL +EG   +R++  S+  L  L KL LK C S ESLP+ +    S
Sbjct: 988  VKLPDFAEDLN-LRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSS 1046

Query: 482  LTSLEIIDCKNF--MRLPDEIGNLEYLKVLTI---------------KG----------- 513
            L  L +  C     +R  +E     +LK L I               KG           
Sbjct: 1047 LQYLSLFGCSKLYNIRSSEEQRGAGHLKKLRIGEAPSRSQSIFSFFKKGLPWPSVAFDKS 1106

Query: 514  ------TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
                   ++R +  SL     +  L LS  NL  IP++      L  L L  NN E +P 
Sbjct: 1107 LEDAHKDSVRCLLPSLPIFPCMRELDLSFCNLLKIPDAFVNFQCLEELYLMGNNFETLPS 1166

Query: 568  RLDPLSSLKYLDLFE-NNLDRIPE-------YLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
             L  LS L +L+L     L  +PE       +  ++ T    E+    L +++ NC +L 
Sbjct: 1167 -LKELSKLLHLNLQHCKRLKYLPELPSRTDLFWWNWTTVDDYEYG---LGLNIFNCPELA 1222

Query: 620  PNELSEIIKDGWMKQSVNGET---YITKSMYFPGNEIPKWF--RHQSTGSTISL-KTPQP 673
              +        WM Q  + +        S   PG+EIP WF  +H   G+ I++ ++   
Sbjct: 1223 ERDRCPNNCFSWMMQIAHPDLLPLVPPISSIIPGSEIPSWFEKQHLGMGNVINIGRSHFM 1282

Query: 674  TGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVC-------DRRSEGYDSYTS 726
              Y   +G A  V+         R     D  + ++  + C        R+ E    Y  
Sbjct: 1283 QHYKNWIGLALSVIFVVHKE---RRIPPPDMEQPSILSITCGPSIPPQQRKKERPSPYIP 1339

Query: 727  S-YLGKISHVESDHVFLGS---SIFAGEN------SCKRSDEFFFHIDRSCCEVKKCGIH 776
              +   +   ESDH++L      +F   N       C+  D    H      EVKK G  
Sbjct: 1340 VLFREDLVTDESDHLWLFYFTLDLFDDRNFDELEVKCRSRD--LLHDQDLVVEVKKYGYR 1397

Query: 777  FVHA 780
            +V+A
Sbjct: 1398 WVYA 1401



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 99/245 (40%), Gaps = 44/245 (17%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
            +L L+ C +   +         L  L + DC +  +LPD   +L  L  L ++G   +R+
Sbjct: 954  QLNLEGCEQLRQIHPSIGHLTKLEVLNLKDCKSLVKLPDFAEDLN-LRELNLEGCEQLRQ 1012

Query: 322  LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
            +   +G L  L KL LK+C  LE + ++I +L S++ + +  CS L         NI  S
Sbjct: 1013 IHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSSLQYLSLFGCSKLY--------NIRSS 1064

Query: 382  GIERIPSSVLKLNKCSKLESLPSSLCMFKS------------------------LTSLEI 417
              +R    + KL          S    FK                         L SL I
Sbjct: 1065 EEQRGAGHLKKLRIGEAPSRSQSIFSFFKKGLPWPSVAFDKSLEDAHKDSVRCLLPSLPI 1124

Query: 418  IDCKK--------LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS 468
              C +        L ++PD   N + LEEL + G     +P SL +L+ L  L L+ C  
Sbjct: 1125 FPCMRELDLSFCNLLKIPDAFVNFQCLEELYLMGNNFETLP-SLKELSKLLHLNLQHCKR 1183

Query: 469  FESLP 473
             + LP
Sbjct: 1184 LKYLP 1188



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 5/138 (3%)

Query: 423  LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESL-PSRLYVSKS 481
            ++ L D    +  L  L +  + + ++P     L L +L L+ C     + PS  +++K 
Sbjct: 917  IQHLWDSTQPIPKLRRLNLSLSALVKLPDFAEDLNLRQLNLEGCEQLRQIHPSIGHLTK- 975

Query: 482  LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNL 539
            L  L + DCK+ ++LPD   +L  L+ L ++G   +R++  S+G L+ L  L L D  +L
Sbjct: 976  LEVLNLKDCKSLVKLPDFAEDLN-LRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSL 1034

Query: 540  QIIPESLNQLSSLVSLKL 557
            + +P ++ +LSSL  L L
Sbjct: 1035 ESLPNNILRLSSLQYLSL 1052


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 171/329 (51%), Gaps = 30/329 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L +L  L ++G  +  +P  +GQL  L +L+L++ + L  + + I +LKS+  
Sbjct: 22  LPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED-NMLTELPAEIGQLKSLVE 80

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +++   + L   P         + I ++ S V+     ++L  LP+ +   KSL  L + 
Sbjct: 81  LKLEG-NELTSMP---------AEIGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLS 130

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +   L  LP E+G L +L EL++EG  +  VP  + QLA L +LKL+  +    LP+ + 
Sbjct: 131 N-NHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLED-NMLTELPAEIG 188

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             KSL  L++ +      +P EIG L  L V  +    + E+P  +GQL SL  L LS+N
Sbjct: 189 QLKSLVELKL-EGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNN 247

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L  +P  + QL SLV LKL +N L  +P  +  L SL  L+L+ N L           T
Sbjct: 248 QLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNNRL-----------T 296

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           S+P+E   L   V+    LKL+ N L+E+
Sbjct: 297 SVPAEIGQLTSLVE----LKLEDNMLTEL 321



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 28/346 (8%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           S+P+      +L  L++ D      LP E+G L++L  L ++G  +  +P  +GQLA L 
Sbjct: 44  SVPAEIGQLTALVELKLEDN-MLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLV 102

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LK 392
              L N ++L  + + I +LKS+  + +SN ++L   P         + I ++ S V LK
Sbjct: 103 VSNL-NYNQLTELPAEIGQLKSLRELNLSN-NHLTILP---------AEIGQLTSLVELK 151

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           L + ++L S+P+ +    SL  L++ D   L  LP E+G L++L EL++EG  +  +P  
Sbjct: 152 L-EGNELTSVPAEIGQLASLVELKLED-NMLTELPAEIGQLKSLVELKLEGNELTSMPAE 209

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           + QL    +     +    LP+ +   KSL  L + + +    LP EIG L+ L  L ++
Sbjct: 210 IGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNQ-LTSLPAEIGQLKSLVELKLE 268

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
              + E+P  +GQL SL  L L +N L  +P  + QL+SLV LKL +N L  +P  +  L
Sbjct: 269 DNMLTELPAEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQL 328

Query: 573 SSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSL 606
            SL+ L L+ N L  +P  +                TS+P+E   L
Sbjct: 329 KSLRELKLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPAEIGQL 374



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 18/208 (8%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
           +   +L  LP E+G L +L EL +EG  +  VP  + QL AL +LKL+  +    LP+ +
Sbjct: 14  LGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED-NMLTELPAEI 72

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              KSL  L++ +      +P EIG L  L V  +    + E+P  +GQL SL  L LS+
Sbjct: 73  GQLKSLVELKL-EGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSN 131

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           N+L I+P  + QL+SLV LKL  N L  +P  +  L+SL  L L +N L           
Sbjct: 132 NHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNML----------- 180

Query: 597 TSIPSEFTSLRLSVDLRNCLKLDPNELS 624
           T +P+E   L+  V+    LKL+ NEL+
Sbjct: 181 TELPAEIGQLKSLVE----LKLEGNELT 204



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 12/121 (9%)

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           E+G L  L+ + +    +  +P  +GQL+SL  L L  N L  +P  + QL++LV LKL 
Sbjct: 2   EVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLE 61

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSL 606
           +N L  +P  +  L SL  L L  N L  +P  +                T +P+E   L
Sbjct: 62  DNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQL 121

Query: 607 R 607
           +
Sbjct: 122 K 122



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 171/394 (43%), Gaps = 61/394 (15%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
           LV LK+  + +T+L  ++  L SL  + L+ ++L +   ++    +L + +L Y + LTE
Sbjct: 55  LVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNY-NQLTE 113

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGC------SNLKNLPKMTS 179
             + I  L  L  L+L     LT LP  I     L  L L G       + +  L  +  
Sbjct: 114 LPAEIGQLKSLRELNLSN-NHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVE 172

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             L   +      + ELP+ I  L ++ EL +   +    ++S   ++  L S+ +    
Sbjct: 173 LKLEDNM------LTELPAEIGQLKSLVELKLEGNE----LTSMPAEIGQLTSLVVSNLN 222

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
             Q  E+P   I   +S      EL L    +  SLP+     KSL  L++ D      L
Sbjct: 223 YNQLTELP-AEIGQLKSL----RELNLSNN-QLTSLPAEIGQLKSLVELKLEDN-MLTEL 275

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G L++L  L +    +  +P  +GQL  L +L+L++ + L  + + I +LKS+  +
Sbjct: 276 PAEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLED-NMLTELPAEIGQLKSLREL 334

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
           ++ N                                 ++L S+P+ +    SLT L+ + 
Sbjct: 335 KLWN---------------------------------NRLTSVPAEIGQLTSLTELD-LR 360

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
           C +L  +P E+G L +L EL +    +  +P  +
Sbjct: 361 CNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 174/380 (45%), Gaps = 60/380 (15%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVP-----FTELRYFEWHQFPLKTL--NILHW 64
           P    ++T LR L   G++       L  VP      T L   +     L  L   I   
Sbjct: 23  PAEIGQLTSLRELGLEGNE-------LTSVPAEIGQLTALVELKLEDNMLTELPAEIGQL 75

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP----------DLSLAQN-L 113
           ++LV LK+ G+++T +  ++  L SL   +L Y++ LT+LP          +L+L+ N L
Sbjct: 76  KSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQ-LTELPAEIGQLKSLRELNLSNNHL 134

Query: 114 EIL--DLGYCSSLTE----------THSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYL 160
            IL  ++G  +SL E            + I  L  L  L L+    LT LP  I   K L
Sbjct: 135 TILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLED-NMLTELPAEIGQLKSL 193

Query: 161 KRLVLRGCSNLKNLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
             L L G + L ++P    ++TS  + +   L    + ELP+ I  L ++ EL + S  +
Sbjct: 194 VELKLEG-NELTSMPAEIGQLTSLVVSN---LNYNQLTELPAEIGQLKSLRELNL-SNNQ 248

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L ++ + I +L+ L  +++         E+P   I   +S      EL L    R  S+P
Sbjct: 249 LTSLPAEIGQLKSLVELKLEDN---MLTELP-AEIGQLKSL----VELNLYNN-RLTSVP 299

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
           +      SL  L++ D      LP E+G L++L  L +    +  +P  +GQL  L++L+
Sbjct: 300 AEIGQLTSLVELKLEDN-MLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELD 358

Query: 337 LKNCSELEYISSSIFKLKSV 356
           L+ C+EL  + + I +L S+
Sbjct: 359 LR-CNELTSVPAEIGQLTSL 377


>gi|168026517|ref|XP_001765778.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682955|gb|EDQ69369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 321

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%)

Query: 293 CPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           C   E  P  L NL AL  L       ++++PEG G L  L KL +K C  +E   S + 
Sbjct: 1   CEAMEEFPSGLPNLVALEELNFSKCRNLKKMPEGFGSLTCLKKLSMKECEAMEEFPSGLP 60

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
            L ++E ++IS C NLK  PE    N+       +    L  ++C  L+ LP      + 
Sbjct: 61  NLVALEELDISKCRNLKKIPEGGLPNL-------VTLEELYFSQCRNLKKLPEGFGSLRC 113

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           L  L + +C+ +E+ P  L NL ALEEL+V +   ++++P+    L  L +L + +C + 
Sbjct: 114 LKKLYMWECEAIEKFPSGLPNLVALEELKVIQCRNLKKIPEGFESLICLKELCMWECKAM 173

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSS 528
           E   S L    +L  L    C+N  +LP+  G+L  LK L + +  A+ E P  L  L +
Sbjct: 174 EEFSSGLSNVVALEELNFSKCRNLKKLPEGFGSLTCLKKLYMWECEAMEEFPSGLLNLIA 233

Query: 529 LEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNL 585
           LE L +S  +NL+ +PE    L+ L  L +     +E  P  L  L +L+  +  +  NL
Sbjct: 234 LEELDISKCSNLKKLPEGFGSLTCLKKLNMWECEAMEEFPSGLPNLVALEEFNFSKCRNL 293

Query: 586 DRIPEYL 592
            ++PE L
Sbjct: 294 KKMPEGL 300



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 27/319 (8%)

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE 273
           C+ +E   S +  L  LE +   +C NL+  +MP      T  K+     L +K+C   E
Sbjct: 1   CEAMEEFPSGLPNLVALEELNFSKCRNLK--KMPEGFGSLTCLKK-----LSMKECEAME 53

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDE-LGNLQALNRLIIDGTA-IRELPEGLGQLAL 331
             PSG     +L  L+I  C N +++P+  L NL  L  L       +++LPEG G L  
Sbjct: 54  EFPSGLPNLVALEELDISKCRNLKKIPEGGLPNLVTLEELYFSQCRNLKKLPEGFGSLRC 113

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--------IPFCNIDGSGI 383
           L KL +  C  +E   S +  L ++E +++  C NLK  PE           C  +   +
Sbjct: 114 LKKLYMWECEAIEKFPSGLPNLVALEELKVIQCRNLKKIPEGFESLICLKELCMWECKAM 173

Query: 384 ERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
           E   S +        L  +KC  L+ LP        L  L + +C+ +E  P  L NL A
Sbjct: 174 EEFSSGLSNVVALEELNFSKCRNLKKLPEGFGSLTCLKKLYMWECEAMEEFPSGLLNLIA 233

Query: 436 LEELRV-EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
           LEEL + + + ++++P+    L  L KL + +C + E  PS L    +L       C+N 
Sbjct: 234 LEELDISKCSNLKKLPEGFGSLTCLKKLNMWECEAMEEFPSGLPNLVALEEFNFSKCRNL 293

Query: 494 MRLPDEIGNLEYLKVLTIK 512
            ++P+ +G L  LK L ++
Sbjct: 294 KKMPEGLGILTCLKKLNMR 312



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 73/365 (20%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVL 140
             + NLV+L+ ++    + L K+P+       L+ L +  C ++ E  S +  L  LE L
Sbjct: 9   SGLPNLVALEELNFSKCRNLKKMPEGFGSLTCLKKLSMKECEAMEEFPSGLPNLVALEEL 68

Query: 141 DLDRCKSLTSLPTSIHSKY--LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
           D+ +C++L  +P         L+ L    C NLK LP+             G G      
Sbjct: 69  DISKCRNLKKIPEGGLPNLVTLEELYFSQCRNLKKLPE-------------GFG------ 109

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE 258
           S++CL    +L ++ C+ +E   S +  L  LE +++ +C NL+ +              
Sbjct: 110 SLRCLK---KLYMWECEAIEKFPSGLPNLVALEELKVIQCRNLKKI-------------- 152

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
                        PE   S  C    L  L + +C   E     L N+ AL  L      
Sbjct: 153 -------------PEGFESLIC----LKELCMWECKAMEEFSSGLSNVVALEELNFSKCR 195

Query: 319 -IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----- 372
            +++LPEG G L  L KL +  C  +E   S +  L ++E ++IS CSNLK  PE     
Sbjct: 196 NLKKLPEGFGSLTCLKKLYMWECEAMEEFPSGLLNLIALEELDISKCSNLKKLPEGFGSL 255

Query: 373 --IPFCNI-DGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             +   N+ +   +E  PS +           +KC  L+ +P  L +   L  L + +C+
Sbjct: 256 TCLKKLNMWECEAMEEFPSGLPNLVALEEFNFSKCRNLKKMPEGLGILTCLKKLNMRECE 315

Query: 422 KLERL 426
            +E  
Sbjct: 316 AMEEF 320


>gi|449528475|ref|XP_004171230.1| PREDICTED: uncharacterized protein LOC101229421 [Cucumis sativus]
          Length = 666

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 141/312 (45%), Gaps = 60/312 (19%)

Query: 87  LVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
           L SLK + L Y K L KLPD S A NLE L L  C++L   H SI  L+KL  LDL +C 
Sbjct: 2   LKSLKVLKLAYCKKLEKLPDFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCS 61

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           +L  LP+ +  K L+ L L  C  L                      EE+P     L N+
Sbjct: 62  NLEKLPSYLTLKSLEYLNLAHCKKL----------------------EEIPDFSSAL-NL 98

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
             L +  C  L  I  SI  L  L ++ + +C NL                E+  S LKL
Sbjct: 99  KSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNL----------------EKLPSYLKL 142

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
           K                SL   E+  C   E  P    N+++L  L +D TAIRELP  +
Sbjct: 143 K----------------SLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSI 186

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC--NIDGSG-- 382
           G L  L  L L  C+ L  + S+I+ L S+ ++++ NC  L+  P +P C   +D +G  
Sbjct: 187 GYLTALFVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHCIQKMDATGCT 246

Query: 383 -IERIPSSVLKL 393
            + R P +++ +
Sbjct: 247 LLGRSPDNIMDI 258



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 126/236 (53%), Gaps = 22/236 (9%)

Query: 281 MFKSLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           M KSL  L++  C   E+LPD     NL+ L   + + T +R + + +G L+ L  L+L 
Sbjct: 1   MLKSLKVLKLAYCKKLEKLPDFSTASNLEKL--YLKECTNLRMIHDSIGSLSKLVTLDLG 58

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC-NIDGSGIER------IPSSV- 390
            CS LE + S +  LKS+E + +++C  L+  P+     N+    +E+      I  S+ 
Sbjct: 59  KCSNLEKLPSYL-TLKSLEYLNLAHCKKLEEIPDFSSALNLKSLYLEQCTNLRVIHESIG 117

Query: 391 -------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                  L L +C+ LE LPS L + KSL   E+  C KLE  P    N+++L  L ++ 
Sbjct: 118 SLNSLVTLDLRQCTNLEKLPSYLKL-KSLRHFELSGCHKLEMFPKIAENMKSLISLHLDS 176

Query: 444 TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           T IRE+P S+  L AL  L L  C++  SLPS +Y+  SL +L++ +CK    +P+
Sbjct: 177 TAIRELPSSIGYLTALFVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPN 232



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 37/199 (18%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE--------------- 126
           D + +L  L  +DL     L KLP     ++LE L+L +C  L E               
Sbjct: 44  DSIGSLSKLVTLDLGKCSNLEKLPSYLTLKSLEYLNLAHCKKLEEIPDFSSALNLKSLYL 103

Query: 127 --------THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT 178
                    H SI  LN L  LDL +C +L  LP+ +  K L+   L GC  L+  PK+ 
Sbjct: 104 EQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLKLKSLRHFELSGCHKLEMFPKIA 163

Query: 179 -------SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                  S HL ST       I ELPSSI  L+ +  L ++ C  L ++ S+I+ L  L 
Sbjct: 164 ENMKSLISLHLDST------AIRELPSSIGYLTALFVLNLHGCTNLISLPSTIYLLMSLW 217

Query: 232 SIRIHRCPNLQFL-EMPSC 249
           ++++  C  LQ +  +P C
Sbjct: 218 NLQLRNCKFLQEIPNLPHC 236


>gi|357507449|ref|XP_003624013.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355499028|gb|AES80231.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 520

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 156/319 (48%), Gaps = 23/319 (7%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           + +V +K+  SK+  LW  ++ +  LK +++ +SK L +LPD S   NLE L L  C  L
Sbjct: 42  DEVVDIKLSHSKIQHLWQGIKFIGKLKYLNMTFSKKLKRLPDFSGVPNLEKLILKGCDGL 101

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLR 183
           TE H S+ +  K+ +++L+ CKSL SLP  +    L++L+L GC   K LP+   S    
Sbjct: 102 TEVHPSLLHHKKVVLMNLEDCKSLKSLPGKLEMSSLEKLILSGCCEFKILPEFGESMENL 161

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           S L L G+ I  LPSS+  L  +  L + +CK L  +  +I +L  L  + I  C  L  
Sbjct: 162 SMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLNSLIILNISGCSRLCR 221

Query: 244 LEMPSCNIDGTRS----KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-- 297
           L       DG +     KE  +++  +      + LPS      +L S+ I         
Sbjct: 222 LP------DGLKEIKCLKELHANDTAI------DELPSSIFYLDNLKSIIIFGSQQASTG 269

Query: 298 -RLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            R P  L NL +L  + +    + E  +P+ L  L+ L  L+L   +   YI S+I KL 
Sbjct: 270 FRFPTSLWNLPSLRYINLSYCNLSEESIPDYLRHLSSLKSLDLTG-NNFVYIPSTISKLP 328

Query: 355 SVESIEISNCSNLKGFPEI 373
            +  + ++ C  L+  PEI
Sbjct: 329 KLHFLYLNCCQKLQLLPEI 347



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 108/214 (50%), Gaps = 8/214 (3%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           ++ L  C  L+SLP  L M  SL  L +  C + + LP+   ++E L  L +EG  IR +
Sbjct: 116 LMNLEDCKSLKSLPGKLEM-SSLEKLILSGCCEFKILPEFGESMENLSMLALEGIAIRNL 174

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           P SL  L  L+ L LK C S   LP  ++   SL  L I  C    RLPD +  ++ LK 
Sbjct: 175 PSSLGSLVGLASLNLKNCKSLVCLPDTIHRLNSLIILNISGCSRLCRLPDGLKEIKCLKE 234

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI----IPESLNQLSSLVSLKLSNNNL-- 562
           L    TAI E+P S+  L +L+ +++  +         P SL  L SL  + LS  NL  
Sbjct: 235 LHANDTAIDELPSSIFYLDNLKSIIIFGSQQASTGFRFPTSLWNLPSLRYINLSYCNLSE 294

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           E IP+ L  LSSLK LDL  NN   IP  +   P
Sbjct: 295 ESIPDYLRHLSSLKSLDLTGNNFVYIPSTISKLP 328


>gi|108740399|gb|ABG01555.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740405|gb|ABG01558.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740435|gb|ABG01573.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740449|gb|ABG01580.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS----------------- 479
           L + G + + E+P S+   + L KL L++C+    LPS +  +                 
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLEL 193

Query: 480 -------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
                   +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 178/392 (45%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 168/313 (53%), Gaps = 23/313 (7%)

Query: 284 SLTSLEIIDCPNFE--RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
           +L  L+ +D  N E  +LPD +GNL  L +L I+   + +LPE +G L  L  L + N +
Sbjct: 66  NLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNV-NLN 124

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
            L  +  +I  +K + S+ I   SN     E+    +   G++ +       N+ S++  
Sbjct: 125 RLTLLPENIGNIKKMRSLYIE--SN-----ELTLLPVSIGGLQNLEQLFTSSNRLSQI-- 175

Query: 402 LPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
            P S+C   +LT+L+++D K  +L +LP  +G L  L++L +    + E+P+S+  L   
Sbjct: 176 -PESIC---NLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHL 231

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLE--IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           ++     +    LP  +    +LT+L+   I+     +LP+ I NL  L++L I    + 
Sbjct: 232 QMLDIGYNELSELPESI---SNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLS 288

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
           ++P  +G L+ L+ L +++N L  +PE ++ L++L  L + NN L R+P R+  L++LK 
Sbjct: 289 QLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKV 348

Query: 578 LDLFENNLDRIPE 590
           LD+  N L +IPE
Sbjct: 349 LDIKNNQLTQIPE 361



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 99/174 (56%), Gaps = 5/174 (2%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
            +L  +PD +GNL  L++L +    + ++P S+  L  L +L ++  +    LP  +   
Sbjct: 32  NELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRN-NELGQLPDSIGNL 90

Query: 480 KSLTSLEIIDCKNFM-RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
             L  L+I D  N++ +LP+ IGNL  L++L +    +  +PE++G +  +  L +  N 
Sbjct: 91  IHLQQLDIED--NWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNE 148

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           L ++P S+  L +L  L  S+N L +IPE +  L++L+ LD+ +N L ++P+++
Sbjct: 149 LTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHI 202



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 62/334 (18%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P +   + EL +L    ++   +  ++  +      Y E ++  L  ++I   +NL  L 
Sbjct: 107 PESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLF 166

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSS 130
              ++++Q+ + + NL +L+ +D+K ++ LT+LP  +   + L+ LD+G  + L+E   S
Sbjct: 167 TSSNRLSQIPESICNLTNLQMLDIKDNE-LTQLPKHIGKLRKLKKLDIG-NNELSELPES 224

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
           I  L  L++LD+     L+ LP SI             SNL NL ++   + + T     
Sbjct: 225 ITNLTHLQMLDIG-YNELSELPESI-------------SNLTNLQELYIENNQLT----- 265

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
               +LP SI  L+N+  L I+        ++ + +L     +RI    +LQ L + +  
Sbjct: 266 ----QLPESITNLTNLRMLYIH--------NNQLSQL----PLRIGNLTHLQILAIANN- 308

Query: 251 IDGTRSKEQPSSELKLKKCP-RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
                         KL + P R  +L + Q ++        I      RLP  +GNL  L
Sbjct: 309 --------------KLSELPERISNLTNLQKLY--------IQNNQLTRLPLRIGNLTNL 346

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
             L I    + ++PE +  L  L  L L N   L
Sbjct: 347 KVLDIKNNQLTQIPESISNLTNLETLVLTNNPNL 380


>gi|108740423|gb|ABG01567.1| disease resistance protein [Arabidopsis thaliana]
          Length = 404

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYXKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 167/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI ++  L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYXKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|108740401|gb|ABG01556.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740453|gb|ABG01582.1| disease resistance protein [Arabidopsis thaliana]
          Length = 405

 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|108740407|gb|ABG01559.1| disease resistance protein [Arabidopsis thaliana]
          Length = 399

 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 6   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 65

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 66  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATXLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 265

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 266 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 319

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 320 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 372



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 44  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 103

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 163

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 164 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATXLVYMNLSNCSNLVELPL 218

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 219 SIGNL-------QKLQELILKGCSKLEDLPI-NINLESLDILVLNDCSMLKRFPEISTNV 270

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 271 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 303

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 304 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 360

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 361 IDAEDCESLERL 372



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 21  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 76

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 77  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 129

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 130 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 189

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 190 LELPSSIGNATXLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 241

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 242 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 295

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 296 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 331

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 332 KRISRLQTLIL 342



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 23  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 77

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 78  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 132

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 133 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 192

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  +  L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 193 PSSIGNATXLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDI 251

Query: 532 LVLSD 536
           LVL+D
Sbjct: 252 LVLND 256


>gi|108738562|gb|ABG00813.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 239/542 (44%), Gaps = 102/542 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           ENL  + + G    +   D+ N  +L+++  +   LL K+P  +   + L  LD   CS 
Sbjct: 53  ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 112

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           L+E    +  L  LE L L  C  L+ LP +I +   LK L+L G + +KNLP+ +    
Sbjct: 113 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQ 171

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L G  I+ELP  I  L ++ +L +     L+N+ SSI  L+ L+ + + RC +L
Sbjct: 172 NLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSL 230

Query: 242 --------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
                   +   +    I+G+  +E P          +P SLP       SL      DC
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPL---------KPSSLP-------SLYDFSAGDC 274

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
              +++P  +G L +L +L +  T I  LPE +G L  + +LEL+NC  L+++  SI  +
Sbjct: 275 KFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDM 334

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            ++ S+                 N++GS IE +P    KL K                L 
Sbjct: 335 DTLYSL-----------------NLEGSNIEELPEEFGKLEK----------------LV 361

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L + +CK L+RLP+  G+L++L  L ++ T + E+P+S                     
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGX------------------ 403

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSL 529
                  +L  LE++  K   R+ +            + GT+      EVP S  +L  L
Sbjct: 404 -----XXNLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKL 447

Query: 530 EWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDR 587
           E L      +   IP+ L +LS L+ L L NN    +P  L  LS+L+   L +   L R
Sbjct: 448 EELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKR 507

Query: 588 IP 589
           +P
Sbjct: 508 LP 509



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 72/391 (18%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
           A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +  L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSVDLR- 613
            ++ L+L      R  ++L+  P SI                   P EF  L   V+LR 
Sbjct: 312 FIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRM 365

Query: 614 -NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
            NC  LK  P    ++  +   +MK+++  E
Sbjct: 366 SNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 196/459 (42%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G    L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGXXXNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|297791241|ref|XP_002863505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309340|gb|EFH39764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1137

 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 163/331 (49%), Gaps = 26/331 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGV--PFTELRYFE 50
           +S++  EI ++   F  M  LR LKF        C + NK  +++ EGV  P  ++R   
Sbjct: 524 LSEVEGEICLDCDHFEDMCNLRYLKFYNSHCPQECKTTNK--INTPEGVKLPLKKVRCLH 581

Query: 51  WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
           W +FPL+   N     NLV LK+P SK+ QLW+  ++   LK +DL++S  L  L  L  
Sbjct: 582 WLEFPLEEFPNDFDPINLVDLKLPRSKIKQLWEGDKDTPFLKWVDLQHSSKLCSLSGLLK 641

Query: 110 AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
           A+ L+ L+L  C++L      +  +  L  L+L  C SL  LP  ++   LK L L GCS
Sbjct: 642 AEKLQRLNLEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLP-EMNLVSLKTLTLSGCS 700

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           + K+ P ++      TL L G  I +LP++++ L ++  L +  CK LE I   + +L+ 
Sbjct: 701 SFKDFPLISDN--IETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKA 758

Query: 230 LESIRIHRCPNLQF---LEMPSCNI---DGTRSKEQPS----SELKLKKCPRPESLPSGQ 279
           L+ + +  C NL+    + M S NI   DGT  +  P       L L +  +   LP G 
Sbjct: 759 LQELILSDCFNLKNFPEINMSSLNILLLDGTAVEVMPQLPSVQYLSLSRNTKISCLPIGI 818

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
                L  L +  C     +P+   NLQ L+
Sbjct: 819 SHLSQLKWLNLKYCTKLTSVPEFPPNLQCLD 849



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 238/542 (43%), Gaps = 82/542 (15%)

Query: 282  FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             K +  L  ++ P  E  P++   +  ++ L +  + I++L EG      L  ++L++ S
Sbjct: 574  LKKVRCLHWLEFP-LEEFPNDFDPINLVD-LKLPRSKIKQLWEGDKDTPFLKWVDLQHSS 631

Query: 342  ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
            +L  +S  + K + ++ + +  C+ LK  P       D   ++ +  S L L  C+ LE 
Sbjct: 632  KLCSLSG-LLKAEKLQRLNLEGCTTLKTLPH------DMHKMKVL--SFLNLKGCTSLEF 682

Query: 402  LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSK 460
            LP    +  SL +L +  C   +  P    N+E L    ++GT I ++P ++ +L +L  
Sbjct: 683  LPEMNLV--SLKTLTLSGCSSFKDFPLISDNIETL---YLDGTEISQLPTNMEKLQSLVV 737

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            L +K C   E +P R+   K+L  L + DC N    P EI N+  L +L + GTA+  +P
Sbjct: 738  LNMKDCKMLEEIPGRVNELKALQELILSDCFNLKNFP-EI-NMSSLNILLLDGTAVEVMP 795

Query: 521  ESLGQLSSLEWLVLSDNN-LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYL 578
                QL S+++L LS N  +  +P  ++ LS L  L L     L  +PE   P  +L+ L
Sbjct: 796  ----QLPSVQYLSLSRNTKISCLPIGISHLSQLKWLNLKYCTKLTSVPE-FPP--NLQCL 848

Query: 579  DLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG-------- 630
            D    +L  +    +     +P+E      +    NC  L+     EI            
Sbjct: 849  DAHGCSL--LKTVSKPLARIMPTEQN--HSTFIFTNCQNLEQAAKEEITSYAQRKCQLLS 904

Query: 631  WMKQSVNGETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
            + ++  NG   +++S++   FPG E+P WF H++ GS + +K        KL G A C V
Sbjct: 905  YARKRYNG-GLVSESLFSTCFPGCEVPSWFCHETVGSELKVKLLPHWHDKKLAGIALCAV 963

Query: 688  VACSVSECCRHESVEDDRKCNLFDVVCDRRSEG---------YDSYTSSYLGKISH---- 734
            V+C           E   + + F V C  + E            S+T    GK++     
Sbjct: 964  VSC----------FEHQDQISRFSVTCTFKVEDKSWIPFTFPVGSWTRHEDGKVTRHEDE 1013

Query: 735  ---VESDHVFLGSSIFAGE------------NSCKRSDEFFFHIDRSCCEVKKCGIHFVH 779
               +ESDHVF+G + +               NS + S  F         +V +CG   V+
Sbjct: 1014 KDKIESDHVFIGYTSYPHTIKCPEDGNSDKCNSTQASLNFTITGANEKLKVLQCGFSLVY 1073

Query: 780  AQ 781
            A+
Sbjct: 1074 AR 1075



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 21/225 (9%)

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
           S + K + L+ + +  C  L+ L            K +  S L LK C   E LP    +
Sbjct: 637 SGLLKAEKLQRLNLEGCTTLKTLPH-------DMHKMKVLSFLNLKGCTSLEFLPEMNLV 689

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             SL +L +  C +F+  P    N++ L    +DGT I +LP  + +L  L  L +K+C 
Sbjct: 690 --SLKTLTLSGCSSFKDFPLISDNIETL---YLDGTEISQLPTNMEKLQSLVVLNMKDCK 744

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN-----IDGSGIERIPS----SVLK 392
            LE I   + +LK+++ + +S+C NLK FPEI   +     +DG+ +E +P       L 
Sbjct: 745 MLEEIPGRVNELKALQELILSDCFNLKNFPEINMSSLNILLLDGTAVEVMPQLPSVQYLS 804

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           L++ +K+  LP  +     L  L +  C KL  +P+   NL+ L+
Sbjct: 805 LSRNTKISCLPIGISHLSQLKWLNLKYCTKLTSVPEFPPNLQCLD 849


>gi|168051496|ref|XP_001778190.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670403|gb|EDQ56972.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 351

 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 147/299 (49%), Gaps = 24/299 (8%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN----FERLPDELGNLQALNRLII-DG 316
           S L L +C +  SLP+      SLTSL +  C N       LP+ELGNL +L  L I + 
Sbjct: 52  SSLNLVECWKLTSLPNELGNLTSLTSLNLSGCWNGFLNLTSLPNELGNLTSLTSLSISEY 111

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE---- 372
             +  LP   G L  L+ L L  CS L  +S+++  L S+ S+ +S CSNL   P     
Sbjct: 112 WELTSLPNEFGNLTSLTSLNLSWCSRLTSLSNNLGNLTSLASLSLSRCSNLTSLPNELGN 171

Query: 373 ---IPFCNIDGS-GIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
              +   N+ G   +  +P+ +        L L+ C KL SLP+ L    SLTSL +  C
Sbjct: 172 LTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPNELGNLTSLTSLNLSGC 231

Query: 421 KKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYV 478
             L  LP+ELGNL +L  L + G   +  +P  L    +L+ L L  C    SLP+ L  
Sbjct: 232 LSLTSLPNELGNLTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPNELDN 291

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD 536
             SL+SL +++C     LP+E+GNL  L  L + G   +  +P  L  L+S   L LS 
Sbjct: 292 LTSLSSLNLVECWKLTSLPNELGNLTSLTSLNLSGCWKLTSLPNELDNLTSFTSLNLSG 350



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 169/395 (42%), Gaps = 60/395 (15%)

Query: 88  VSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
            SL  ++L     L  LP+ L    +L  L+L  C  L    + +  L  L  L+L  C 
Sbjct: 1   TSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPNELGNLTSLSSLNLVECW 60

Query: 147 SLTSLPTSIHS-KYLKRLVLRGCSN-----------LKNLPKMTSCHLRSTLPLLGVGIE 194
            LTSLP  + +   L  L L GC N           L NL  +TS  +     L      
Sbjct: 61  KLTSLPNELGNLTSLTSLNLSGCWNGFLNLTSLPNELGNLTSLTSLSISEYWEL-----T 115

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP+    L+++  L +  C RL ++S+++  L  L S+ + RC NL  L     N+   
Sbjct: 116 SLPNEFGNLTSLTSLNLSWCSRLTSLSNNLGNLTSLASLSLSRCSNLTSLPNELGNLTSL 175

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
            S       L L  C    +LP+    F SLTSL +  C     LP+ELGNL +L  L +
Sbjct: 176 TS-------LNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPNELGNLTSLTSLNL 228

Query: 315 DGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
            G  ++  LP  LG L  L+ L L  C  L  + + +    S+ S+ +S           
Sbjct: 229 SGCLSLTSLPNELGNLTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLS----------- 277

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
                                 C KL SLP+ L    SL+SL +++C KL  LP+ELGNL
Sbjct: 278 ---------------------GCWKLISLPNELDNLTSLSSLNLVECWKLTSLPNELGNL 316

Query: 434 EALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKC 466
            +L  L + G   +  +P  L  L + + L L  C
Sbjct: 317 TSLTSLNLSGCWKLTSLPNELDNLTSFTSLNLSGC 351



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 160 LKRLVLRGCSNLKNLPK-------MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY 212
           L  L L GC +L  LP        +TS +L     L+      LP+ +  L+++  L + 
Sbjct: 3   LTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLI-----SLPNELGNLTSLSSLNLV 57

Query: 213 SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
            C +L ++ + +  L  L S+ +  C N  FL + S  +          + L + +    
Sbjct: 58  ECWKLTSLPNELGNLTSLTSLNLSGCWN-GFLNLTS--LPNELGNLTSLTSLSISEYWEL 114

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLAL 331
            SLP+      SLTSL +  C     L + LGNL +L  L +   + +  LP  LG L  
Sbjct: 115 TSLPNEFGNLTSLTSLNLSWCSRLTSLSNNLGNLTSLASLSLSRCSNLTSLPNELGNLTS 174

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L+ L L  C  L  + + +    S+ S+ +S C  L   P       +   +  + S  L
Sbjct: 175 LTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPN------ELGNLTSLTS--L 226

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVP 450
            L+ C  L SLP+ L    SLTSL +  C  L  LP+ELGN  +L  L + G   +  +P
Sbjct: 227 NLSGCLSLTSLPNELGNLTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLP 286

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             L  L +LS L L +C    SLP+ L    SLTSL +  C     LP+E+ NL     L
Sbjct: 287 NELDNLTSLSSLNLVECWKLTSLPNELGNLTSLTSLNLSGCWKLTSLPNELDNLTSFTSL 346

Query: 510 TIKG 513
            + G
Sbjct: 347 NLSG 350



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 127/274 (46%), Gaps = 45/274 (16%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-----G 445
           L L+ C KL SLP+ L    SL+SL +++C KL  LP+ELGNL +L  L + G       
Sbjct: 30  LNLSGCWKLISLPNELGNLTSLSSLNLVECWKLTSLPNELGNLTSLTSLNLSGCWNGFLN 89

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI----------------- 487
           +  +P  L  L +L+ L + +     SLP+      SLTSL +                 
Sbjct: 90  LTSLPNELGNLTSLTSLSISEYWELTSLPNEFGNLTSLTSLNLSWCSRLTSLSNNLGNLT 149

Query: 488 -------IDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSD-NN 538
                    C N   LP+E+GNL  L  L + G  ++  +P  LG  +SL  L LS    
Sbjct: 150 SLASLSLSRCSNLTSLPNELGNLTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWK 209

Query: 539 LQIIPESLNQLSSLVSLKLSNN-NLERIPERLDPLSSLKYLDLFEN-NLDRIPEYLRSFP 596
           L  +P  L  L+SL SL LS   +L  +P  L  L+SL  L+L    +L  +P  L    
Sbjct: 210 LISLPNELGNLTSLTSLNLSGCLSLTSLPNELGNLTSLTSLNLSGCLSLITLPNEL---- 265

Query: 597 TSIPSEFTSLRLSVDLRNCLKLD--PNELSEIIK 628
                 FTSL  S++L  C KL   PNEL  +  
Sbjct: 266 ----GNFTSLT-SLNLSGCWKLISLPNELDNLTS 294


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 41/315 (13%)

Query: 282 FKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            K L +LE++   N     LP ELG+L++L  L +    ++ +P+ +G L  L KL LK 
Sbjct: 204 LKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLK- 262

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            + +E +   + KLK +E +++ N                                 ++L
Sbjct: 263 MNRVEGLPKELGKLKQLEQLDLYN---------------------------------NRL 289

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-L 458
           +++P  L    +L  L++    +L+ LP EL N +ALE+L + G  + ++PK+L  L  L
Sbjct: 290 KTVPKELGKLTALKKLDL-SRNRLQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQQL 348

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +L L   +    LP  L   K+L SL++ +     +LP+ +G LE LK L ++  A+ +
Sbjct: 349 KRLNLD-ANRLVGLPESLGKLKNLESLDLRENA-LKKLPESLGGLEKLKNLQLRKNALTK 406

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PES+G+L +LE L    N L+ +PES+  L  L  + L+ N L  +PE L  L +L+ L
Sbjct: 407 LPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTL 466

Query: 579 DLFENN-LDRIPEYL 592
           +L+ N+ L ++P+ L
Sbjct: 467 NLWNNSTLQKLPKSL 481



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 178/357 (49%), Gaps = 53/357 (14%)

Query: 284 SLTSLEIIDCPNFE--RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL------ 335
           +LT+L+I+D  + +  +LP+ L  L+ L+ L +    I+ELP G+ +L  L  L      
Sbjct: 79  ALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNP 138

Query: 336 ------ELKNCSELEYISSSIFKLKSVESIEISN--CSNLKGFPEIP--FCNIDGSGIER 385
                 EL   S+L  + +    L   E +   N   +NL+   + P     ++   + +
Sbjct: 139 IKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQ 198

Query: 386 IPSS---------VLKLNKCSKLESLPSSLCMFKSLTSL------------EIIDCKKLE 424
           IP           VLKLN  + L +LP  L   KSL  L            EI D ++L+
Sbjct: 199 IPVQKLKKLKNLEVLKLNNNA-LRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLK 257

Query: 425 RL----------PDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
           +L          P ELG L+ LE+L +    ++ VPK L +L AL KL L + +  ++LP
Sbjct: 258 KLNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSR-NRLQNLP 316

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             L  +++L  L +       +LP  +GNL+ LK L +    +  +PESLG+L +LE L 
Sbjct: 317 QELTNAQALEKLNL-RGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLD 375

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           L +N L+ +PESL  L  L +L+L  N L ++PE +  L +L+ LD + N L+ +PE
Sbjct: 376 LRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPE 432



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 37/349 (10%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDEL------GNLQALNRLIIDGTAIRE----- 321
           + LP+G      L  L I+  P  ++LP EL        L+A  +L++    +R+     
Sbjct: 117 KELPTGIARLNKLKYLNIVGNP-IKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLF 175

Query: 322 --LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE------- 372
             L E L   A + KLEL +  ++      + KLK++E ++++N + L+  P+       
Sbjct: 176 TNLEEALKTPAQVYKLELHSLRQIPV--QKLKKLKNLEVLKLNNNA-LRTLPKELGSLKS 232

Query: 373 IPFCNIDGSGIERIPSSV------LKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           +   ++  + ++ +P  +       KLN K +++E LP  L   K L  L++ + + L+ 
Sbjct: 233 LKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYNNR-LKT 291

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSL--AQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
           +P ELG L AL++L +    ++ +P+ L  AQ AL KL L+  ++   LP  L   + L 
Sbjct: 292 VPKELGKLTALKKLDLSRNRLQNLPQELTNAQ-ALEKLNLR-GNALTQLPKNLGNLQQLK 349

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D    + LP+ +G L+ L+ L ++  A++++PESLG L  L+ L L  N L  +P
Sbjct: 350 RLNL-DANRLVGLPESLGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLP 408

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           ES+ +L +L SL    N LE +PE +  L  LK ++L  N L  +PE L
Sbjct: 409 ESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLAYNQLTELPESL 457



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 235/512 (45%), Gaps = 102/512 (19%)

Query: 92  RIDLKYSKL---------LTKLPDLSLAQ--------------NLEILDLGYCSSLTETH 128
           R+DL   KL          T+L +L LAQ              NL+I+DL + + L +  
Sbjct: 39  RLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLSH-NQLGKLP 97

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTL 186
             +  L  L  L+L   + +  LPT I     LK L + G   +K LP ++T     +TL
Sbjct: 98  EFLFKLRHLHTLNLAHNQ-IKELPTGIARLNKLKYLNIVGNP-IKKLPAELTQLSQLATL 155

Query: 187 PL---LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF--LESIRIHRCPNL 241
                L V  E L    K  +N+ E L           + ++KL+   L  I + +   L
Sbjct: 156 KADKKLLVQWEMLRKKNKLFTNLEEAL--------KTPAQVYKLELHSLRQIPVQKLKKL 207

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           + LE+   N +  R                  +LP      KSL  L + +    + +P 
Sbjct: 208 KNLEVLKLNNNALR------------------TLPKELGSLKSLKELHLQNNL-LKTVPK 248

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           E+G+LQ L +L +    +  LP+ LG+L  L +L+L N + L+ +   + KL +++ +++
Sbjct: 249 EIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYN-NRLKTVPKELGKLTALKKLDL 307

Query: 362 SNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNK-------CSKLESLPSSLC 407
           S  + L+  P+       +   N+ G+ + ++P ++  L +        ++L  LP SL 
Sbjct: 308 SR-NRLQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLG 366

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS 467
             K+L SL++ +   L++LP+ LG LE L+ L++    + ++P+S+        KL+   
Sbjct: 367 KLKNLESLDLREN-ALKKLPESLGGLEKLKNLQLRKNALTKLPESIG-------KLQNLE 418

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
           S +S  + L                   LP+ IG L+ LK + +    + E+PESLG+L 
Sbjct: 419 SLDSWGNALE-----------------GLPESIGGLKKLKKMNLAYNQLTELPESLGKLE 461

Query: 528 SLEWLVLSDNN-LQIIPESLNQLSSLVSLKLS 558
           +L+ L L +N+ LQ +P+SL  L +L S K+ 
Sbjct: 462 NLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQ 493



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 31/248 (12%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILHWENLVS 69
           P    K+ +L  L    ++ K +   L     T L+  +  +  L+ L   + + + L  
Sbjct: 270 PKELGKLKQLEQLDLYNNRLKTVPKELG--KLTALKKLDLSRNRLQNLPQELTNAQALEK 327

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L + G+ +TQL  ++ NL  LKR++L  ++L+     L   +NLE LDL   ++L +   
Sbjct: 328 LNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDL-RENALKKLPE 386

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRL-----VLRG----CSNLKNLPKMTS 179
           S+  L KL+ L L R  +LT LP SI   + L+ L      L G       LK L KM  
Sbjct: 387 SLGGLEKLKNLQL-RKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNL 445

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
            + + T         ELP S+  L N+  L +++   L+ +  S+  L+ L+S ++    
Sbjct: 446 AYNQLT---------ELPESLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKM---- 492

Query: 240 NLQFLEMP 247
             QF ++P
Sbjct: 493 --QFDKLP 498


>gi|108740358|gb|ABG01535.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740366|gb|ABG01539.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740372|gb|ABG01542.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740376|gb|ABG01544.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740409|gb|ABG01560.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740417|gb|ABG01564.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740425|gb|ABG01568.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740433|gb|ABG01572.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740445|gb|ABG01578.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740473|gb|ABG01592.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740481|gb|ABG01596.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740485|gb|ABG01598.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|15227315|ref|NP_179279.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|3757516|gb|AAC64218.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
 gi|330251451|gb|AEC06545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1109

 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 152/298 (51%), Gaps = 24/298 (8%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLNI- 61
           SE+ ++     +M+ LR L    +++    ++H  E + F   LR   W  +P K+L + 
Sbjct: 537 SEVILSNRALRRMSNLRFLSVYKTRHDGNNIMHIPEDMKFPPRLRLLHWEAYPSKSLPLG 596

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L M  S++ +LW+  Q L +LK++DL  S  L +LPDLS A NLE L+L  C
Sbjct: 597 FCLENLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPDLSNATNLERLELCDC 656

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            +L E   SI  L+KLE L +  C SL  +PT I+   L+ + + GCS LK  P  ++  
Sbjct: 657 RALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNI 716

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            R  L L+G  +EE+P+SI+  S++ +  I + + L++++       F E + +      
Sbjct: 717 ER--LLLIGTSVEEVPASIRHWSSLSDFCIKNNEDLKSLT------YFPEKVELLDLSYT 768

Query: 242 QFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
              ++P C     G +S       L +  C +  SLP    +  SL  L  +DC + E
Sbjct: 769 DIEKIPDCIKGFHGLKS-------LDVAGCRKLTSLPE---LPMSLGLLVALDCESLE 816



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 41/263 (15%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLAL 331
           E L  G  +  +L  +++    + + LPD L N   L RL + D  A+ ELP+ +G L  
Sbjct: 613 EKLWEGTQLLTNLKKMDLSRSVHLKELPD-LSNATNLERLELCDCRALVELPKSIGNLHK 671

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID-----GSGIERI 386
           L  L + NC  LE I + I  L S+E I ++ CS LK FP+    NI+     G+ +E +
Sbjct: 672 LENLVMANCISLEVIPTHI-NLASLEHITMTGCSRLKTFPDFS-TNIERLLLIGTSVEEV 729

Query: 387 PSSVLKLNKCSK----------------------------LESLPSSLCMFKSLTSLEII 418
           P+S+   +  S                             +E +P  +  F  L SL++ 
Sbjct: 730 PASIRHWSSLSDFCIKNNEDLKSLTYFPEKVELLDLSYTDIEKIPDCIKGFHGLKSLDVA 789

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
            C+KL  LP+   +L  L  L  E   I   P +      ++L    C        RL +
Sbjct: 790 GCRKLTSLPELPMSLGLLVALDCESLEIITYPLNTPS---ARLNFTNCFKLGEESRRLII 846

Query: 479 SKSLTS-LEIIDCKNFMRLPDEI 500
            +  T  L+   C     +PDE 
Sbjct: 847 QRCATQFLDGYACLPGRVMPDEF 869



 Score = 45.8 bits (107), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 33/189 (17%)

Query: 433 LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           LE L EL ++ + + ++ +    L  L K+ L +    + LP  L  + +L  LE+ DC+
Sbjct: 599 LENLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPD-LSNATNLERLELCDCR 657

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW-------------------- 531
             + LP  IGNL  L+ L +      EV  +   L+SLE                     
Sbjct: 658 ALVELPKSIGNLHKLENLVMANCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNIE 717

Query: 532 -LVLSDNNLQIIPESLNQLSSLVSLKLSNN----NLERIPERLDPLSSLKYLDLFENNLD 586
            L+L   +++ +P S+   SSL    + NN    +L   PE+++       LDL   +++
Sbjct: 718 RLLLIGTSVEEVPASIRHWSSLSDFCIKNNEDLKSLTYFPEKVE------LLDLSYTDIE 771

Query: 587 RIPEYLRSF 595
           +IP+ ++ F
Sbjct: 772 KIPDCIKGF 780


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 161/331 (48%), Gaps = 44/331 (13%)

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           LR+F    +P ++L +    + LV LK+ G+ +  LW + ++L SL+RIDL  SK L + 
Sbjct: 587 LRWFVLPGYPRESLPSTFEPKMLVHLKLSGNSLRYLWMETKHLPSLRRIDLSRSKRLMRT 646

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
           PD +   NLE LDL +CS+L E H S+    KL  LDL  CKSL   P  ++ + L+ L 
Sbjct: 647 PDFTGMPNLEYLDLTWCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFPC-VNVESLEYLG 705

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGV-----GIEELPSS-IKCLSNIGELLIYSCKRLE 218
           L  C +L+  P++     R   P + +     GI ELPSS  +  ++I +L +   + L 
Sbjct: 706 LEYCDSLEKFPEIH----RRMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLSGIRNLV 761

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG--------TRSKEQPSSELKLKKC- 269
            + SSI +L+ L  + +  CP L+ L     ++D         T     PSS ++L K  
Sbjct: 762 ALPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKLK 821

Query: 270 -----------------PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
                            P  E L S + +   L+   +ID      LP+++G+L +L  L
Sbjct: 822 ILSFSSFGYDGVHFEFPPVAEGLHSLEHL--DLSYCNLIDGG----LPEDIGSLSSLKEL 875

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            +DG     LP  + QL  L  L+L +C  L
Sbjct: 876 CLDGNNFEHLPRSIAQLGALQILDLSDCKRL 906



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 202/435 (46%), Gaps = 68/435 (15%)

Query: 283  KSLTSLEIIDCPNFERL---PDELG--NLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
            K L SL  ID    +RL   PD  G  NL+ L+  +   + + E+   LG    L +L+L
Sbjct: 627  KHLPSLRRIDLSRSKRLMRTPDFTGMPNLEYLD--LTWCSNLEEVHHSLGCCRKLIRLDL 684

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV 390
             NC  L  +      ++S+E + +  C +L+ FPEI          ++  SGI  +PSS 
Sbjct: 685  YNCKSL--MRFPCVNVESLEYLGLEYCDSLEKFPEIHRRMKPEIQIHMGDSGIRELPSSY 742

Query: 391  ---------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                     L L+    L +LPSS+C  KSL  L +  C KLE LP+E+G+L+ LEEL  
Sbjct: 743  FQYQTHITKLDLSGIRNLVALPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELDA 802

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY---VSKSLTSLEIIDCK--NFMR- 495
            + T I   P S+ +  L+KLK+   SSF           V++ L SLE +D    N +  
Sbjct: 803  KCTLISRPPSSIVR--LNKLKILSFSSFGYDGVHFEFPPVAEGLHSLEHLDLSYCNLIDG 860

Query: 496  -LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL- 552
             LP++IG+L  LK L + G     +P S+ QL +L+ L LSD   L  +PE    L+ L 
Sbjct: 861  GLPEDIGSLSSLKELCLDGNNFEHLPRSIAQLGALQILDLSDCKRLTQLPELHPGLNVLH 920

Query: 553  VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDL 612
            V   ++   L+   + +     L+ + L + + D I      F  ++    +SLR  +  
Sbjct: 921  VDCHMA---LKFFRDLVTKRKKLQRVGLDDAHNDSIYNL---FAHALFQNISSLRHDI-- 972

Query: 613  RNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
                    + LSE +                 S+  P  +IP WF HQ   S++S   P+
Sbjct: 973  -----FASDSLSESV----------------FSIVHPWKKIPSWFHHQGRDSSVSANLPK 1011

Query: 673  PTGY--NKLMGFAFC 685
               Y  +K +GFA C
Sbjct: 1012 -NWYIPDKFLGFAVC 1025


>gi|297791235|ref|XP_002863502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309337|gb|EFH39761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1161

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 161/331 (48%), Gaps = 50/331 (15%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFT--ELRYFE 50
           +S++  E  ++   F  MT+LR LKF        C + NK  ++ L+G+  T  E+R   
Sbjct: 562 LSEVKGETSLDKDHFKCMTKLRYLKFYNSHCPHKCKTNNK--INILDGLMLTLKEVRCLH 619

Query: 51  WHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSL 109
           W +FPL+ L N  +  NLV LK+P S++ QLW+  +++  LK +DL +S  L  L  LS 
Sbjct: 620 WLKFPLEKLPNDFYPNNLVDLKLPYSEIKQLWEGDKDIPVLKWVDLNHSSKLCSLSGLSK 679

Query: 110 AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
           AQNL++L+L  C+SL                     KSL      ++SK LK L L GCS
Sbjct: 680 AQNLQVLNLEGCTSL---------------------KSL----GDVNSKSLKTLTLSGCS 714

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           N K  P +        L L G  I +LP ++  L  +  L +  C++L+NI + + +L+ 
Sbjct: 715 NFKEFPLIPEN--LEALYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKS 772

Query: 230 LESIRIHRCPNL-QFLEMPSCN-----IDGTRSKEQPS----SELKLKKCPRPESLPSGQ 279
           L+ + +  C  L +F E+   +     +DGT  K  P       L L +      LP+G 
Sbjct: 773 LQKLVLSGCLKLKEFSEINKSSLKFLLLDGTSIKTMPQLPSVQYLCLSRNDNLSYLPAGI 832

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
                LT L++  C     +P+   NLQ L+
Sbjct: 833 NQLSQLTRLDLKYCKKLTSIPELPPNLQYLD 863



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 175/381 (45%), Gaps = 61/381 (16%)

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            VL L  C+ L+SL       KSL +L +  C   +  P    NLEAL    ++GT I ++
Sbjct: 685  VLNLEGCTSLKSLGD--VNSKSLKTLTLSGCSNFKEFPLIPENLEAL---YLDGTAISQL 739

Query: 450  PKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC---KNFMRLPDEIGNLEY 505
            P +L  L  L  L +K C   +++P+ +   KSL  L +  C   K F  +     N   
Sbjct: 740  PDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQKLVLSGCLKLKEFSEI-----NKSS 794

Query: 506  LKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLE 563
            LK L + GT+I+ +P    QL S+++L LS N NL  +P  +NQLS L  L L     L 
Sbjct: 795  LKFLLLDGTSIKTMP----QLPSVQYLCLSRNDNLSYLPAGINQLSQLTRLDLKYCKKLT 850

Query: 564  RIPERLDPLSSLKYLDLFE-NNLDRIPEYL-RSFPTSIPSEFTSLRLSVDLRNCLKLDPN 621
             IPE L P  +L+YLD    ++L+ + + L R  PT         R + +  NC  L+  
Sbjct: 851  SIPE-LPP--NLQYLDAHGCSSLNTVAKPLARIMPT------VQNRCTFNFTNCDNLEQA 901

Query: 622  ELSEIIKDGWMK-------QSVNGETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTP 671
             + EI      K       +    E + +++++   FPG E+P WF H+  GS +  K  
Sbjct: 902  AMDEITSFAQSKCQFLSDARKHYNEGFSSEALFTTCFPGCEVPSWFSHEERGSLMQRKL- 960

Query: 672  QPTGYNK-LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVC-------DRRSEGYDS 723
             P  ++K L G A C VV+    +           + + F V C       ++    +  
Sbjct: 961  LPHWHDKSLSGIALCAVVSFPAGQT----------QISSFSVACTFTIKVQEKSWIPFTC 1010

Query: 724  YTSSYLG-KISHVESDHVFLG 743
               S+ G K   +ESDHVF+ 
Sbjct: 1011 QVGSWEGDKEDKIESDHVFIA 1031



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 19/218 (8%)

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
           C++ G  SK Q    L L+ C   +SL  G    KSL +L +  C NF+  P    NL+A
Sbjct: 672 CSLSGL-SKAQNLQVLNLEGCTSLKSL--GDVNSKSLKTLTLSGCSNFKEFPLIPENLEA 728

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L    +DGTAI +LP+ L  L  L  L +K+C +L+ I + + +LKS++ + +S C  LK
Sbjct: 729 L---YLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQKLVLSGCLKLK 785

Query: 369 GFPEI-----PFCNIDGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            F EI      F  +DG+ I+ +P       L L++   L  LP+ +     LT L++  
Sbjct: 786 EFSEINKSSLKFLLLDGTSIKTMPQLPSVQYLCLSRNDNLSYLPAGINQLSQLTRLDLKY 845

Query: 420 CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL 456
           CKKL  +P+   NL+ L+     G + +  V K LA++
Sbjct: 846 CKKLTSIPELPPNLQYLD---AHGCSSLNTVAKPLARI 880


>gi|108740403|gb|ABG01557.1| disease resistance protein [Arabidopsis thaliana]
          Length = 404

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +   I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPIDI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPI-DINLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             + + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 IDINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P  +  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPIDIN-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|108740364|gb|ABG01538.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ E  +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLREXDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE + ++I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPTNI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L   DL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLREXDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP+     +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPTN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L   ++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLREXDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
           +++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 TNINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L   ++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLREXDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPTNIN-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 173/339 (51%), Gaps = 26/339 (7%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           LTSL++ +    + LPD L  +  L +L + G  I  LP    ++  L++L L N S L 
Sbjct: 74  LTSLDVWEN-KIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGN-SGLA 131

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC- 396
            I   +F L ++  +  S  +NL+  PE       +   ++ G+ + ++P S+  L +  
Sbjct: 132 EIPELVFSLTNLTYLGFSE-NNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELE 190

Query: 397 ------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
                 +KL  +P ++    SLTSL + +  ++  LP  +G L +L  L++    I  +P
Sbjct: 191 ELYIWENKLTEIPQAIGKLTSLTSLNLGE-NQIAELPQMIGKLTSLTSLKLWSNQIAIIP 249

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           +++  L +L+ L L   +    +P  +    SLTSL++        LP  IGNL  L  L
Sbjct: 250 EAIGNLTSLTALGLS-SNQIAIIPEAIGNLTSLTSLDL-SFNQIAELPQTIGNLTSLTSL 307

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           +++   I E+P+++G L+SL  L L  N +  +P+++  L+SL SL LSNN +  +P+ +
Sbjct: 308 SLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTI 367

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL 608
             L+SL  LDL  N +  +P+ + +      +  TSL L
Sbjct: 368 GNLTSLTSLDLSFNQIAELPQTIGNL-----TSLTSLNL 401



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 267/604 (44%), Gaps = 106/604 (17%)

Query: 91  KRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS---------LTETHSSIQYLNKLEVLD 141
           K +DL    L    P++    +LE L LG             LTE    I  L KL  LD
Sbjct: 19  KELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLD 78

Query: 142 L--DRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST-LPLLGVGIEELPS 198
           +  ++ KSL      I +  L +L L G + +++LP   S   R T L L   G+ E+P 
Sbjct: 79  VWENKIKSLPDWLAQITN--LTKLYLYG-NKIESLPNWFSEMTRLTELGLGNSGLAEIPE 135

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE 258
            +  L+N+   L +S   L+ +  SI  L+ L+ + +                 G  S  
Sbjct: 136 LVFSLTNL-TYLGFSENNLQVLPESISNLKNLKKLSL-----------------GGNSLS 177

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
           Q               LP    +   L  L I +      +P  +G L +L  L +    
Sbjct: 178 Q---------------LPESIALLTELEELYIWEN-KLTEIPQAIGKLTSLTSLNLGENQ 221

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           I ELP+ +G+L  L+ L+L   +++  I  +I  L S+ ++ +S+               
Sbjct: 222 IAELPQMIGKLTSLTSLKLW-SNQIAIIPEAIGNLTSLTALGLSS--------------- 265

Query: 379 DGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
             + I  IP ++  L   + L+        LP ++    SLTSL + +  ++  LP  +G
Sbjct: 266 --NQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRN-NQIAELPQTIG 322

Query: 432 NLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           NL +L  L +    I E+P+++  L +L+ L L   +    LP  +    SLTSL++   
Sbjct: 323 NLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSN-NQIAELPQTIGNLTSLTSLDL-SF 380

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                LP  IGNL  L  L +    I E+P+++G L+SL  L LS+N +  +P+++  L+
Sbjct: 381 NQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLT 440

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
           SL SL L +N +  +P+ +  L+SL  LDL  N +  +P+ + +      +  T+L LS 
Sbjct: 441 SLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNL-----TSLTNLNLSF 495

Query: 611 D--------LRNC-----LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE---IP 654
           +        + N      L L  N+++E      + Q++   T +T    +  N+   IP
Sbjct: 496 NQIAELLQTIGNLTSLSDLDLSNNQIAE------LPQTIGNLTSLTDLKLY-NNQIAVIP 548

Query: 655 KWFR 658
           +WFR
Sbjct: 549 EWFR 552



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 11/115 (9%)

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS----------DN 537
           ++ + F+ L D     E  K L + G  + E+P  +G+L+ LE L+L            N
Sbjct: 1   MEAQEFLELIDRAAE-EQWKELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGN 59

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            L  IP  +  L  L SL +  N ++ +P+ L  +++L  L L+ N ++ +P + 
Sbjct: 60  LLTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWF 114


>gi|168067643|ref|XP_001785720.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662641|gb|EDQ49469.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 340

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 160/316 (50%), Gaps = 28/316 (8%)

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  LG L  L+ L ++ CS L  + + +  L S+ ++ +  CS+L   P           
Sbjct: 9   PNTLGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPN---------E 59

Query: 383 IERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           +  I S + L +  CS L SLP+ L    SL   +I DC  L  LP+ELGNL +L  L +
Sbjct: 60  LGNITSLTTLNMRYCSSLTSLPNELGNLTSLIEFDISDCSSLTSLPNELGNLTSLTTLNM 119

Query: 442 E-GTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
              + +  +P  L  L +L+ L ++ CSS  SLP+ L    SLT+L +  C +   LP+E
Sbjct: 120 TYCSSLTSLPNKLGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPNE 179

Query: 500 IGNLEYLKVLTIK-GTAIREVPESLGQLSSLEWLVLSD--NNLQIIPESLNQLSSLVSL- 555
           +GNL  L  L ++  +++  +P  LG L+SL    +S   ++L  +P  L  L+SL +L 
Sbjct: 180 LGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTFNISGYCSSLTSLPNELGNLTSLTTLY 239

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRN 614
           +   ++L  +P  LD L+SL   D+ + ++L  +P  L           TSL  ++++R 
Sbjct: 240 RRYCSSLISLPNELDNLTSLIEFDISDCSSLTLLPNEL--------GNLTSLT-TLNMRY 290

Query: 615 CLKLD--PNELSEIIK 628
           C  L   PN+L  I  
Sbjct: 291 CSSLTSLPNKLGNITT 306



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 162/340 (47%), Gaps = 35/340 (10%)

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS 256
           P+++  L+++  L +  C  L ++ + +  L  L ++ +  C +L  L     NI     
Sbjct: 9   PNTLGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPNELGNITSL-- 66

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IID 315
                + L ++ C    SLP+      SL   +I DC +   LP+ELGNL +L  L +  
Sbjct: 67  -----TTLNMRYCSSLTSLPNELGNLTSLIEFDISDCSSLTSLPNELGNLTSLTTLNMTY 121

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--- 372
            +++  LP  LG L  L+ L ++ CS L  + + +  L S+ ++ +  CS+L   P    
Sbjct: 122 CSSLTSLPNKLGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPNELG 181

Query: 373 ---------IPFCNIDGSGIERIPSSVLKLNK---------CSKLESLPSSLCMFKSLTS 414
                    + +C    S +  +P+ +  L           CS L SLP+ L    SLT+
Sbjct: 182 NLTSLTTLNMRYC----SSLTSLPNELGNLTSLTTFNISGYCSSLTSLPNELGNLTSLTT 237

Query: 415 LEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESL 472
           L    C  L  LP+EL NL +L E  + + + +  +P  L  L +L+ L ++ CSS  SL
Sbjct: 238 LYRRYCSSLISLPNELDNLTSLIEFDISDCSSLTLLPNELGNLTSLTTLNMRYCSSLTSL 297

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           P++L    +LT+L +  C +   LP+ +GNL  L  L ++
Sbjct: 298 PNKLGNITTLTTLNMRYCSSLTSLPNTLGNLTSLTTLNMR 337



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 177/385 (45%), Gaps = 60/385 (15%)

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-- 176
           YCSSLT   +++  L  L  L++  C SLTSLP  + +   L  L +R CS+L +LP   
Sbjct: 3   YCSSLTP--NTLGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPNEL 60

Query: 177 -----MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                +T+ ++R         +  LP+ +  L+++ E  I  C  L ++ + +  L  L 
Sbjct: 61  GNITSLTTLNMR-----YCSSLTSLPNELGNLTSLIEFDISDCSSLTSLPNELGNLTSLT 115

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           ++ +  C +L                                SLP+      SLT+L + 
Sbjct: 116 TLNMTYCSSLT-------------------------------SLPNKLGNLTSLTTLNMR 144

Query: 292 DCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
            C +   LP+ELGNL +L  L +   +++  LP  LG L  L+ L ++ CS L  + + +
Sbjct: 145 YCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTLNMRYCSSLTSLPNEL 204

Query: 351 FKLKSVESIEISN-CSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCM 408
             L S+ +  IS  CS+L   P           +  + S + L    CS L SLP+ L  
Sbjct: 205 GNLTSLTTFNISGYCSSLTSLPN---------ELGNLTSLTTLYRRYCSSLISLPNELDN 255

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPKSLAQLA-LSKLKLKKC 466
             SL   +I DC  L  LP+ELGNL +L  L +   + +  +P  L  +  L+ L ++ C
Sbjct: 256 LTSLIEFDISDCSSLTLLPNELGNLTSLTTLNMRYCSSLTSLPNKLGNITTLTTLNMRYC 315

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCK 491
           SS  SLP+ L    SLT+L +  C 
Sbjct: 316 SSLTSLPNTLGNLTSLTTLNMRYCS 340



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL   D+     LT LP+ L    +L  L++ YCSSLT   + +  
Sbjct: 75  SSLTSLPNELGNLTSLIEFDISDCSSLTSLPNELGNLTSLTTLNMTYCSSLTSLPNKLGN 134

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
           L  L  L++  C SLTSLP                + L NL  +T+ ++R         +
Sbjct: 135 LTSLTTLNMRYCSSLTSLP----------------NELGNLTSLTTLNMR-----YCSSL 173

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH-RCPNLQFLEMPSCNID 252
             LP+ +  L+++  L +  C  L ++ + +  L  L +  I   C +L  L     N+ 
Sbjct: 174 TSLPNELGNLTSLTTLNMRYCSSLTSLPNELGNLTSLTTFNISGYCSSLTSLPNELGNLT 233

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
                    + L  + C    SLP+      SL   +I DC +   LP+ELGNL +L  L
Sbjct: 234 SL-------TTLYRRYCSSLISLPNELDNLTSLIEFDISDCSSLTLLPNELGNLTSLTTL 286

Query: 313 IID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +   +++  LP  LG +  L+ L ++ CS L  + +++  L S+ ++ +  CS
Sbjct: 287 NMRYCSSLTSLPNKLGNITTLTTLNMRYCSSLTSLPNTLGNLTSLTTLNMRYCS 340


>gi|334183385|ref|NP_001185252.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332195282|gb|AEE33403.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1117

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 150/303 (49%), Gaps = 25/303 (8%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNK-CMVHSLEGVPF-TELRYFEWHQFPLKTLNILH 63
           E+ IN   F KM  L +LK F G+  +   +H  E +   + +R   W  +P K+     
Sbjct: 542 ELVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELPSSIRLLHWEAYPRKSFR-FG 600

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            ENLV+L M  S++ +LW   Q L +LK ++L  S  L +LPDLS A NLE LD+  C++
Sbjct: 601 PENLVTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNA 660

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E  SS+  L+K+  L ++ C+SL  +PT I+   LK + +  C  LK+ P + +    
Sbjct: 661 LVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTS--L 718

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             L +   G++ELP+S +  + +  L I S + L+  S+             H    L+ 
Sbjct: 719 EELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFST-------------HLPMGLRK 765

Query: 244 LEMPSCNIDGTRSKEQPSSE---LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L++ +C I+      +       LKL  C R  SLP   C   SL  L   DC + ER+ 
Sbjct: 766 LDLSNCGIEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPC---SLECLFAEDCTSLERVS 822

Query: 301 DEL 303
           D L
Sbjct: 823 DSL 825



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 50/205 (24%)

Query: 237 RCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII- 291
           +  NL+ L++  CN    I  + +       L ++ C   E +P+      +L SL+II 
Sbjct: 646 KAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPT----LINLASLKIIN 701

Query: 292 --DCPNFERLPDELGNLQALNRLIIDGTAIRELPE------GLGQLAL------------ 331
             DCP  +  PD   +L+    L+I+ T ++ELP       G+  L +            
Sbjct: 702 IHDCPRLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFSTH 758

Query: 332 ----LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI------DGS 381
               L KL+L NC  +E+++ SI  L ++  +++S C  L   PE+P C++      D +
Sbjct: 759 LPMGLRKLDLSNCG-IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELP-CSLECLFAEDCT 816

Query: 382 GIER------IPSSVLKLNKCSKLE 400
            +ER      IP++     KC  L+
Sbjct: 817 SLERVSDSLNIPNAQFNFIKCFTLD 841



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 34/224 (15%)

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK- 395
           L N  E+    SS  K    E  ++S  +NL+   ++  CN     +  IPSSV  L+K 
Sbjct: 624 LANLKEMNLCGSSCLK----ELPDLSKAANLERL-DVAECN----ALVEIPSSVANLHKI 674

Query: 396 -------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                  C  LE +P+ L    SL  + I DC +L+  PD      +LEEL +E TG++E
Sbjct: 675 VNLHMESCESLEVIPT-LINLASLKIINIHDCPRLKSFPDVP---TSLEELVIEKTGVQE 730

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +P S          L  CS+        ++   L  L++ +C     + D I +L  L  
Sbjct: 731 LPASFRHCT-GVTTLYICSNRNLKTFSTHLPMGLRKLDLSNC-GIEWVTDSIKDLHNLYY 788

Query: 509 LTIKG----TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN 547
           L + G     ++ E+P       SLE L   D  +L+ + +SLN
Sbjct: 789 LKLSGCKRLVSLPELP------CSLECLFAEDCTSLERVSDSLN 826


>gi|108740463|gb|ABG01587.1| disease resistance protein [Arabidopsis thaliana]
          Length = 412

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 200/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS       L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAIXLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+ ++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLEPLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 162/372 (43%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI     +  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGXAIXLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      + L  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLEPLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS----------------- 479
           L + G + + E+P S+   + L KL L++C+    LPS +  +                 
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAIXLQNLLLDDCSSLLEL 193

Query: 480 -------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
                   +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L  L+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LEPLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 176/392 (44%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI     +++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAIXLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + + L  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-EPLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|108740393|gb|ABG01552.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAFNLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ E+ +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLREVDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + +  L
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVXL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE + ++I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPTNI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAFNLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  +DL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLREVDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVXLPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP+     +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPTN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  +++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAFNLQ---KLLLRYCSNLVELPSSIGNAINLREVDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVXLP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
           +++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 TNINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  +++  C  L RLP  +GN   L  
Sbjct: 79  DAFNLQK-----LLLRYCSNLVELPSSIGNAINLREVDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVXLPLSIGNLQKLQELILKGCSKLEDLPTNIN-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 35/299 (11%)

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C  L SLPS +C FKSL +L    C +L+  PD L ++E L  L ++ T I+E+P S+ +
Sbjct: 959  CKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRNLYLDRTAIKEIPSSIER 1018

Query: 456  L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-- 512
            L  L  L L  C +  +LP  +    SL  L +  C NF +LPD +G L+ L  L +   
Sbjct: 1019 LRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCPNFKKLPDNLGRLQSLLHLRVGHL 1078

Query: 513  GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
             +   ++P SL  L SL  L+L   N++ IP  +  LSSL  L L+ N+  RIP+ +  L
Sbjct: 1079 DSMNFQLP-SLSGLCSLGTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQL 1137

Query: 573  SSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
             +L +LDL     L  IPE     P+ +      ++  + ++ C                
Sbjct: 1138 YNLTFLDLSHCKMLQHIPE----LPSGVRRH--KIQRVIFVQGC---------------- 1175

Query: 632  MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVA 689
              +  N  T+I +S     N IP+W  HQ +G  I++K P     N   +G   C ++ 
Sbjct: 1176 --KYRNVTTFIAES-----NGIPEWISHQKSGFKITMKLPWSWYENDDFLGVVLCSLIV 1227



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 111/227 (48%), Gaps = 10/227 (4%)

Query: 14  TFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LHWENLV 68
           +F +M  LRLLK    + K  +  H      F+  E  Y  W ++PL++L +  H +NLV
Sbjct: 477 SFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYEYTYLHWDRYPLESLPLNFHAKNLV 536

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            L +  S + QLW   +    L+ IDL YS  L ++PD S   NLEIL L    S+ +  
Sbjct: 537 ELLLRNSNIKQLWRGSKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLE--GSIRDLP 594

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLRS--T 185
           SSI +LN L+ L L  C  L  +P  I H   LK L L  C+ ++       CHL S   
Sbjct: 595 SSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQK 654

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           L L       +P++I  LS +  L +  C  LE I     +L+ L++
Sbjct: 655 LNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDA 701



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 130/312 (41%), Gaps = 50/312 (16%)

Query: 249  CNIDGTRSK---------EQPSSE-------LKLKKCPRPESLPSGQCMFKSLTSLEIID 292
            C  DG R K         E P  E       L L  C    SLPSG C FKSL +L    
Sbjct: 923  CQCDGARRKRCFGCSDMNEVPIIENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSG 982

Query: 293  CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
            C   +  PD L +++ L  L +D TAI+E+P  + +L  L  L L NC  L  +  SI  
Sbjct: 983  CSQLKSFPDILQDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICN 1042

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKS 411
            L S+  + +  C N K  P+          + R+ S + L++     +     SL    S
Sbjct: 1043 LTSLRKLSVQRCPNFKKLPD---------NLGRLQSLLHLRVGHLDSMNFQLPSLSGLCS 1093

Query: 412  LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
            L +L +  C  +  +P E+ +L +LE L + G     +P  ++QL  L+ L L  C   +
Sbjct: 1094 LGTLMLHAC-NIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQ 1152

Query: 471  SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL- 529
             +P                      LP  +   +  +V+ ++G   R V   + + + + 
Sbjct: 1153 HIP---------------------ELPSGVRRHKIQRVIFVQGCKYRNVTTFIAESNGIP 1191

Query: 530  EWLVLSDNNLQI 541
            EW+    +  +I
Sbjct: 1192 EWISHQKSGFKI 1203



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 23/218 (10%)

Query: 140  LDLDR-----CKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGV 191
            L+LDR     CK+LTSLP+ I + K L  L   GCS LK+ P +     +LR+ L L   
Sbjct: 949  LELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRN-LYLDRT 1007

Query: 192  GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
             I+E+PSSI+ L  +  L + +C  L N+  SI  L  L  + + RCPN  F ++P    
Sbjct: 1008 AIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCPN--FKKLPD--- 1062

Query: 252  DGTRSKEQPSSELKLKKCPRPE-SLP--SGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
                 + Q    L++         LP  SG C   SL +L +  C N   +P E+ +L +
Sbjct: 1063 --NLGRLQSLLHLRVGHLDSMNFQLPSLSGLC---SLGTLMLHAC-NIREIPSEIFSLSS 1116

Query: 309  LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L RL + G     +P+G+ QL  L+ L+L +C  L++I
Sbjct: 1117 LERLCLAGNHFSRIPDGISQLYNLTFLDLSHCKMLQHI 1154



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 121/285 (42%), Gaps = 62/285 (21%)

Query: 415 LEIIDCK---KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES 471
           L +ID      L R+PD   ++  LE L +EG+ IR++P S+  L               
Sbjct: 558 LRVIDLSYSVHLIRIPD-FSSVPNLEILTLEGS-IRDLPSSITHL--------------- 600

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSL 529
                     L +L + +C    ++P+ I +L  LK L +    I E  +P  +  LSSL
Sbjct: 601 --------NGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSL 652

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRI 588
           + L L   +   IP ++NQLS L  L LS+ NNLE+IPE     S L+ LD   +N    
Sbjct: 653 QKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPEL---PSRLRLLDAHGSN---- 705

Query: 589 PEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS--M 646
                   TS  + F  L     L NC     +           + S +   Y  K   +
Sbjct: 706 -------RTSSRAPFLPLH---SLVNCFSWAQDS---------KRTSFSDSFYHGKGTCI 746

Query: 647 YFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFA-FCVVV 688
           + PG + IPK    ++       + PQ     N+ +GFA FCV V
Sbjct: 747 FLPGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAIFCVYV 791



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 18/143 (12%)

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           S+ +I  P+F  +P+       L  L ++G+ IR+LP  +  L  L  L L+ C +L  I
Sbjct: 566 SVHLIRIPDFSSVPN-------LEILTLEGS-IRDLPSSITHLNGLQTLLLQECLKLHQI 617

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSS 405
            + I  L S++ +++ +C+ ++G      C++         SS+ KLN +     S+P++
Sbjct: 618 PNHICHLSSLKELDLGHCNIMEGGIPSDICHL---------SSLQKLNLERGHFSSIPTT 668

Query: 406 LCMFKSLTSLEIIDCKKLERLPD 428
           +     L  L +  C  LE++P+
Sbjct: 669 INQLSRLEVLNLSHCNNLEQIPE 691



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 4/103 (3%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE--VPKSLAQL 456
           +  LPSS+     L +L + +C KL ++P+ + +L +L+EL +    I E  +P  +  L
Sbjct: 590 IRDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHL 649

Query: 457 -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            +L KL L++   F S+P+ +     L  L +  C N  ++P+
Sbjct: 650 SSLQKLNLER-GHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 691



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 35/188 (18%)

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR------------------STLPLL 189
           L SLP + H+K L  L+LR  SN+K L + +  H +                  S++P L
Sbjct: 523 LESLPLNFHAKNLVELLLRN-SNIKQLWRGSKLHDKLRVIDLSYSVHLIRIPDFSSVPNL 581

Query: 190 GV-----GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            +      I +LPSSI  L+ +  LL+  C +L  I + I  L  L+ + +  C N+   
Sbjct: 582 EILTLEGSIRDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHC-NIMEG 640

Query: 245 EMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +PS  C++   +       +L L++     S+P+       L  L +  C N E++P+ 
Sbjct: 641 GIPSDICHLSSLQ-------KLNLER-GHFSSIPTTINQLSRLEVLNLSHCNNLEQIPEL 692

Query: 303 LGNLQALN 310
              L+ L+
Sbjct: 693 PSRLRLLD 700


>gi|108740461|gb|ABG01586.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + + + + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATXLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLXSLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 169/375 (45%), Gaps = 69/375 (18%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATXLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII---DCPNFERLPDEL 303
              N+       Q   EL LK C + E LP    +  +L SL+I+   DC   +R P+  
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLP----ININLXSLDILVLNDCSMLKRFPEIS 268

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
            N++A   L + GTAI E+P           L +++   L+ +  S F            
Sbjct: 269 TNVRA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF------------ 302

Query: 364 CSNLKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKS 411
             NL  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  S
Sbjct: 303 -DNLVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDS 358

Query: 412 LTSLEIIDCKKLERL 426
           L  ++  DC+ LERL
Sbjct: 359 LKWIDAEDCESLERL 373



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATXLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ +  SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-XSLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  +  L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATXLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LXSLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|356532660|ref|XP_003534889.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1036

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 176/382 (46%), Gaps = 83/382 (21%)

Query: 10  INPYTFSKMTELRLLKFCGSKN-KCM--VHSL-------------------EGVPF--TE 45
           ++P  F+KM  LR L+     N  C+  +H L                   +G+ F  TE
Sbjct: 541 LSPRLFAKMNRLRFLEVSVEDNYDCLDQLHILGTNLCWPKQQKTRIVDILAKGLKFLATE 600

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           LR+  W  +  K+L  I   E LV LK+P S + +LW  V+NLV+LK +DL+ SK L +L
Sbjct: 601 LRFLSWKSYSGKSLPEIFSTEKLVILKLPYSGMEKLWLGVKNLVNLKELDLRCSKKLKEL 660

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH-------- 156
           PD+S A NLE++ L  CS LT  H SI  L KLE L+L  C+SL  L ++ H        
Sbjct: 661 PDISKATNLEVILLRGCSMLTNVHPSIFSLPKLERLNLSDCESLNILTSNSHLRSLSYLD 720

Query: 157 -------------SKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL---GVGIEELPSSI 200
                        SK +K L L GC+ +K LP  +S   +S L LL   G  I+ LPSS 
Sbjct: 721 LDFCKNLKKFSVVSKNMKELRL-GCTKVKALP--SSFGHQSKLKLLHLKGSAIKRLPSSF 777

Query: 201 KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPSCNIDGTRSKEQ 259
             L+ +  L + +C +LE I        FLE++    C  LQ L E+P            
Sbjct: 778 NNLTQLLHLELSNCSKLETIEELP---PFLETLNAQYCTCLQTLPELPKL---------- 824

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
               L +K+C   +SLP    +  SL  L   DC             ++L  ++   TA+
Sbjct: 825 -LKTLNVKECKSLQSLPE---LSPSLEILNARDC-------------ESLMTVLFPSTAV 867

Query: 320 RELPEGLGQLALLSKLELKNCS 341
            +L E   Q+   + L L   S
Sbjct: 868 EQLKENRKQVMFWNCLNLDEHS 889



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 119/270 (44%), Gaps = 38/270 (14%)

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           +KNL  +    LR +  L     +ELP   K  +N+  +L+  C  L N+  SIF L  L
Sbjct: 640 VKNLVNLKELDLRCSKKL-----KELPDISKA-TNLEVILLRGCSMLTNVHPSIFSLPKL 693

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           E + +  C +L        NI  + S  +  S L L  C   ++L     + K++  L +
Sbjct: 694 ERLNLSDCESL--------NILTSNSHLRSLSYLDLDFC---KNLKKFSVVSKNMKELRL 742

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
             C   + LP   G+   L  L + G+AI+ LP     L  L  LEL NCS+LE I    
Sbjct: 743 -GCTKVKALPSSFGHQSKLKLLHLKGSAIKRLPSSFNNLTQLLHLELSNCSKLETIEELP 801

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
                +E++    C+ L+  PE+P                L + +C  L+SLP      +
Sbjct: 802 ---PFLETLNAQYCTCLQTLPELPKL-----------LKTLNVKECKSLQSLP------E 841

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELR 440
              SLEI++ +  E L   L    A+E+L+
Sbjct: 842 LSPSLEILNARDCESLMTVLFPSTAVEQLK 871



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 164/391 (41%), Gaps = 77/391 (19%)

Query: 410  KSLTSLEIID---CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLK 464
            K+L +L+ +D    KKL+ LPD +     LE + + G + +  V  S+  L  L +L L 
Sbjct: 641  KNLVNLKELDLRCSKKLKELPD-ISKATNLEVILLRGCSMLTNVHPSIFSLPKLERLNLS 699

Query: 465  KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
             C S   L S  ++ +SL+ L++  CKN  +      N+   K L +  T ++ +P S G
Sbjct: 700  DCESLNILTSNSHL-RSLSYLDLDFCKNLKKFSVVSKNM---KELRLGCTKVKALPSSFG 755

Query: 525  QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSS------ 574
              S L+ L L  + ++ +P S N L+ L+ L+LSN      +E +P  L+ L++      
Sbjct: 756  HQSKLKLLHLKGSAIKRLPSSFNNLTQLLHLELSNCSKLETIEELPPFLETLNAQYCTCL 815

Query: 575  ---------LKYLDLFE-NNLDRIPEYLRS----------------FPTSIPSEFTSLRL 608
                     LK L++ E  +L  +PE   S                FP++   +    R 
Sbjct: 816  QTLPELPKLLKTLNVKECKSLQSLPELSPSLEILNARDCESLMTVLFPSTAVEQLKENRK 875

Query: 609  SVDLRNCLKLDPNELSEIIKDGWM--------------KQSVNGETYITKSMY-FPGNEI 653
             V   NCL LD + L  I  +  +              ++ V       + +Y +PG+ +
Sbjct: 876  QVMFWNCLNLDEHSLVAIGLNAQINMMKFANHHLSTPNREHVENYNDSFQVVYMYPGSSV 935

Query: 654  PKWFRHQSTGS--TISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFD 711
            P W  +++     TI L +  P+       F FC V+          E    D    L  
Sbjct: 936  PGWLEYKTRNYHITIDLSSAPPSPQR---SFVFCFVLG---------EFQRTDIIRTLEF 983

Query: 712  VVCDRRSEGYDSYTSSYLGKI--SHVESDHV 740
             +     EG +   S Y+  +  S +ESDHV
Sbjct: 984  SITMNEGEGKEDSVSMYIDYLGWSSIESDHV 1014


>gi|356532838|ref|XP_003534977.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1055

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 153/298 (51%), Gaps = 26/298 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSL--EGVPFT--ELRYFEWHQFPLKTL-NI 61
           E ++  + F+KM+ L+ LK  G  N      +  E + F+  ELR+  W   PLK+L   
Sbjct: 543 EQKLTHHIFAKMSSLKFLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSLPKS 602

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              E LV LK+  SK+ +LWD VQNLV+LK I+L  S+ L +LPDLS A NLE+L L  C
Sbjct: 603 FSKEKLVMLKLLRSKIEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLLRGC 662

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           S LT  H S+  L KLE LDL  C SLT L + SI S  L  L L  C NL+    M S 
Sbjct: 663 SMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICS--LSYLNLERCVNLREFSVM-SM 719

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           +++  L L    ++ELPSS +  S + +LL      +E + SS   L  L  + +  C N
Sbjct: 720 NMKD-LRLGWTKVKELPSSFEQQSKL-KLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSN 777

Query: 241 LQFL-EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           LQ + E+P                L  + C    +LP      K+L++   IDC + E
Sbjct: 778 LQTIPELPPL-----------LKTLNAQSCTSLLTLPEISLSIKTLSA---IDCKSLE 821



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 23/211 (10%)

Query: 297 ERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           E+L D + NL  L  + + G+  ++ELP+ L +   L  L L+ CS L  +  S+F L  
Sbjct: 619 EKLWDGVQNLVNLKEINLSGSEKLKELPD-LSKATNLEVLLLRGCSMLTSVHPSVFSLIK 677

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPS----SVLKLN------KCSKLESLPSS 405
           +E +++  C +L        C++    +ER  +    SV+ +N        +K++ LPSS
Sbjct: 678 LEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSMNMKDLRLGWTKVKELPSS 737

Query: 406 LCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLK 462
              F+  + L+++  K   +ERLP    NL  L  L V   + ++ +P+ L  L L  L 
Sbjct: 738 ---FEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQTIPE-LPPL-LKTLN 792

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
            + C+S  +LP    +S S+ +L  IDCK+ 
Sbjct: 793 AQSCTSLLTLPE---ISLSIKTLSAIDCKSL 820


>gi|108738432|gb|ABG00749.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 224/526 (42%), Gaps = 125/526 (23%)

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKR 162
           +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L+     +   K L++
Sbjct: 69  IPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEK 128

Query: 163 LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
           L L GCS+L  LP+                      +I  ++++ ELL+     ++N+  
Sbjct: 129 LFLSGCSDLSVLPE----------------------NIGAMTSLKELLLDGTA-IKNLPE 165

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ---PSSELKLKKCPRPESLPSGQ 279
           SI +LQ LE + +  C   +  E+P C I   +S E+     + LK        +LPS  
Sbjct: 166 SINRLQNLEILSLRGC---KIQELPLC-IGTLKSLEKLYLDDTALK--------NLPSSI 213

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              K+L  L ++ C +  ++PD +  L++L +L I+G+A+ ELP     L  L      +
Sbjct: 214 GDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGD 273

Query: 340 CSELEYISSSIFK-----------------------LKSVESIEISNCSNLKGFPE---- 372
           C  L+ + SSI +                       L  +  +E+ NC  LK  P+    
Sbjct: 274 CKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGD 333

Query: 373 ---IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
              +   N++GS IE +P    KL K                L  L + +CK L+RLP+ 
Sbjct: 334 MDTLYSLNLEGSNIEELPEEFGKLEK----------------LVELRMSNCKMLKRLPES 377

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
            G+L++L  L ++ T + E+P+S   L+                       +L  LE++ 
Sbjct: 378 FGDLKSLHRLYMKETLVSELPESFGNLS-----------------------NLMVLEMLK 414

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLEWLVLSDNNLQ-IIPE 544
            K   R+ +            + GT+      EVP S  +L  LE L      +   IP+
Sbjct: 415 -KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPD 463

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIP 589
            L +LS L+ L L NN    +P  L  LS+L+   L +   L R+P
Sbjct: 464 DLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRDCRELKRLP 509



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 198/459 (43%), Gaps = 76/459 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S ++ L +++  + SLK + L  + +      ++  QNLEIL L  C  + E    I  L
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGC-KIQELPLCIGTL 193

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GV 191
             LE L LD   +L +LP+SI   K L+ L L  C++L  +P   +  L+S   L   G 
Sbjct: 194 KSLEKLYLDDT-ALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIN-ELKSLKKLFINGS 251

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-----------------------LQ 228
            +EELP     L ++ +     CK L+ + SSI +                       L 
Sbjct: 252 AVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
           F+  + +  C  L+FL     ++D   S     S +        E LP      + L  L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNI--------EELPEEFGKLEKLVEL 363

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + +C   +RLP+  G+L++L+RL +  T + ELPE  G L+ L  LE+     L  IS 
Sbjct: 364 RMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLK-KPLFRISE 422

Query: 349 SIFKLKSVES--IEISNC-SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL------ 399
           S     S E   +E+ N  S L    E+  C+   SG  +IP  + KL+   KL      
Sbjct: 423 SNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISG--KIPDDLEKLSCLMKLNLGNNY 480

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
             SLPSSL    +L    + DC++L+RLP                     +P  L QL L
Sbjct: 481 FHSLPSSLVKLSNLQEFSLRDCRELKRLP--------------------PLPCKLEQLNL 520

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +      C S ES+ S L     LT L + +C   + +P
Sbjct: 521 A-----NCFSLESV-SDLSELTILTDLNLTNCAKVVDIP 553



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 43/335 (12%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L KL  + C+ L  +  S+  L+ +  ++   CS L  F       +D SG++ +    L
Sbjct: 78  LEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKLSEFL------VDVSGLKLLEK--L 129

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
            L+ CS L  LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P 
Sbjct: 130 FLSGCSDLSVLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPL 188

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            +  L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L 
Sbjct: 189 CIGTLKSLEKLYLDD-TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLF 247

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           I G+A+ E+P     L SL      D   L+ +P S+ +L+SL+ L+LS+  +E +PE +
Sbjct: 248 INGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEI 307

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSI-------------------PSEFTSLRLSV 610
             L  ++ L+L      R  ++L+  P SI                   P EF  L   V
Sbjct: 308 GALHFIRELEL------RNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLV 361

Query: 611 DLR--NC--LKLDPNELSEI--IKDGWMKQSVNGE 639
           +LR  NC  LK  P    ++  +   +MK+++  E
Sbjct: 362 ELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSE 396



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCK---KLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++  +     + +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVIXRGXXXXKAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|9954759|gb|AAG09110.1|AC009323_21 Putative disease resistance protein - partial protein [Arabidopsis
           thaliana]
          Length = 889

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 150/303 (49%), Gaps = 25/303 (8%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNK-CMVHSLEGVPF-TELRYFEWHQFPLKTLNILH 63
           E+ IN   F KM  L +LK F G+  +   +H  E +   + +R   W  +P K+     
Sbjct: 542 ELVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELPSSIRLLHWEAYPRKSFR-FG 600

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            ENLV+L M  S++ +LW   Q L +LK ++L  S  L +LPDLS A NLE LD+  C++
Sbjct: 601 PENLVTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNA 660

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E  SS+  L+K+  L ++ C+SL  +PT I+   LK + +  C  LK+ P + +    
Sbjct: 661 LVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTS--L 718

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             L +   G++ELP+S +  + +  L I S + L+  S+             H    L+ 
Sbjct: 719 EELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFST-------------HLPMGLRK 765

Query: 244 LEMPSCNIDGTRSKEQPSSE---LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L++ +C I+      +       LKL  C R  SLP   C   SL  L   DC + ER+ 
Sbjct: 766 LDLSNCGIEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPC---SLECLFAEDCTSLERVS 822

Query: 301 DEL 303
           D L
Sbjct: 823 DSL 825



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 50/205 (24%)

Query: 237 RCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII- 291
           +  NL+ L++  CN    I  + +       L ++ C   E +P+      +L SL+II 
Sbjct: 646 KAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPT----LINLASLKIIN 701

Query: 292 --DCPNFERLPDELGNLQALNRLIIDGTAIRELPE------GLGQLAL------------ 331
             DCP  +  PD   +L+    L+I+ T ++ELP       G+  L +            
Sbjct: 702 IHDCPRLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFSTH 758

Query: 332 ----LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI------DGS 381
               L KL+L NC  +E+++ SI  L ++  +++S C  L   PE+P C++      D +
Sbjct: 759 LPMGLRKLDLSNCG-IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELP-CSLECLFAEDCT 816

Query: 382 GIER------IPSSVLKLNKCSKLE 400
            +ER      IP++     KC  L+
Sbjct: 817 SLERVSDSLNIPNAQFNFIKCFTLD 841



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 34/224 (15%)

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK- 395
           L N  E+    SS  K    E  ++S  +NL+   ++  CN     +  IPSSV  L+K 
Sbjct: 624 LANLKEMNLCGSSCLK----ELPDLSKAANLERL-DVAECN----ALVEIPSSVANLHKI 674

Query: 396 -------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                  C  LE +P+ L    SL  + I DC +L+  PD      +LEEL +E TG++E
Sbjct: 675 VNLHMESCESLEVIPT-LINLASLKIINIHDCPRLKSFPDVP---TSLEELVIEKTGVQE 730

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +P S          L  CS+        ++   L  L++ +C     + D I +L  L  
Sbjct: 731 LPASFRHCT-GVTTLYICSNRNLKTFSTHLPMGLRKLDLSNC-GIEWVTDSIKDLHNLYY 788

Query: 509 LTIKG----TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN 547
           L + G     ++ E+P       SLE L   D  +L+ + +SLN
Sbjct: 789 LKLSGCKRLVSLPELP------CSLECLFAEDCTSLERVSDSLN 826


>gi|15223551|ref|NP_176044.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12323030|gb|AAG51507.1|AC058785_10 disease resistance protein, putative [Arabidopsis thaliana]
 gi|332195281|gb|AEE33402.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 897

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 150/303 (49%), Gaps = 25/303 (8%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNK-CMVHSLEGVPF-TELRYFEWHQFPLKTLNILH 63
           E+ IN   F KM  L +LK F G+  +   +H  E +   + +R   W  +P K+     
Sbjct: 542 ELVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELPSSIRLLHWEAYPRKSFR-FG 600

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            ENLV+L M  S++ +LW   Q L +LK ++L  S  L +LPDLS A NLE LD+  C++
Sbjct: 601 PENLVTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNA 660

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E  SS+  L+K+  L ++ C+SL  +PT I+   LK + +  C  LK+ P + +    
Sbjct: 661 LVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTS--L 718

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             L +   G++ELP+S +  + +  L I S + L+  S+             H    L+ 
Sbjct: 719 EELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFST-------------HLPMGLRK 765

Query: 244 LEMPSCNIDGTRSKEQPSSE---LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L++ +C I+      +       LKL  C R  SLP   C   SL  L   DC + ER+ 
Sbjct: 766 LDLSNCGIEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPC---SLECLFAEDCTSLERVS 822

Query: 301 DEL 303
           D L
Sbjct: 823 DSL 825



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 50/205 (24%)

Query: 237 RCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII- 291
           +  NL+ L++  CN    I  + +       L ++ C   E +P+      +L SL+II 
Sbjct: 646 KAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPT----LINLASLKIIN 701

Query: 292 --DCPNFERLPDELGNLQALNRLIIDGTAIRELPE------GLGQLAL------------ 331
             DCP  +  PD   +L+    L+I+ T ++ELP       G+  L +            
Sbjct: 702 IHDCPRLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFSTH 758

Query: 332 ----LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI------DGS 381
               L KL+L NC  +E+++ SI  L ++  +++S C  L   PE+P C++      D +
Sbjct: 759 LPMGLRKLDLSNCG-IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELP-CSLECLFAEDCT 816

Query: 382 GIER------IPSSVLKLNKCSKLE 400
            +ER      IP++     KC  L+
Sbjct: 817 SLERVSDSLNIPNAQFNFIKCFTLD 841



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 34/224 (15%)

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK- 395
           L N  E+    SS  K    E  ++S  +NL+   ++  CN     +  IPSSV  L+K 
Sbjct: 624 LANLKEMNLCGSSCLK----ELPDLSKAANLERL-DVAECN----ALVEIPSSVANLHKI 674

Query: 396 -------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                  C  LE +P+ L    SL  + I DC +L+  PD      +LEEL +E TG++E
Sbjct: 675 VNLHMESCESLEVIPT-LINLASLKIINIHDCPRLKSFPDVP---TSLEELVIEKTGVQE 730

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +P S          L  CS+        ++   L  L++ +C     + D I +L  L  
Sbjct: 731 LPASFRHCT-GVTTLYICSNRNLKTFSTHLPMGLRKLDLSNC-GIEWVTDSIKDLHNLYY 788

Query: 509 LTIKG----TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN 547
           L + G     ++ E+P       SLE L   D  +L+ + +SLN
Sbjct: 789 LKLSGCKRLVSLPELP------CSLECLFAEDCTSLERVSDSLN 826


>gi|108740352|gb|ABG01532.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-XLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-IXLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++   +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 INI-XLESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 200/396 (50%), Gaps = 39/396 (9%)

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGT 317
           P +E  +  C   + + S     K L  LE ++    N + LP E+G L+ L  L++   
Sbjct: 43  PENETVISICR--QGITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNN 100

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI--PF 375
            ++ L + +G+L  LS L L + +ELE + ++I +L+++  +++ + +  + FP +    
Sbjct: 101 KLKTLSDVIGELENLSTLHLDD-NELETLPAAIGELENLRDLDLGD-NQFESFPTVIRKL 158

Query: 376 CNI-----DGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKL 423
            N+     D + +E  P+ + +L K        +KL+ LP  +   K+L  L +    KL
Sbjct: 159 KNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNL-SLNKL 217

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSL 482
           E LP E+G L+ L+ L +    +  +P ++ +L  L KL L + ++ ++LP  +   K L
Sbjct: 218 ESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHR-NNLKTLPVEIEKLKEL 276

Query: 483 TSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII 542
             L++   K    LP EI  L+ L++L + G  +  +P ++G+L +L+ L L+DN L+ +
Sbjct: 277 RILQLSGNK-LETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDNKLETL 335

Query: 543 PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT----- 597
           P ++ +L +L  L L NN L+ +P  +  L  L+YLDL  N L+ +P  +          
Sbjct: 336 PAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGELKNLRELN 395

Query: 598 -------SIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
                  ++P E   L  S+ L   L L  N +SE+
Sbjct: 396 LSGNKLETLPIEIEKLSGSMQL---LNLRGNNISEV 428



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 10/160 (6%)

Query: 480 KSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
           K L  LE ++    N   LP EIG L+ L+ L +    ++ + + +G+L +L  L L DN
Sbjct: 64  KRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDN 123

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L+ +P ++ +L +L  L L +N  E  P  +  L +L+ L L  N L+       SFPT
Sbjct: 124 ELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLE-------SFPT 176

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVN 637
            I +E   L+    L N LKL P+E+ E+    ++  S+N
Sbjct: 177 VI-AELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLN 215



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 174/387 (44%), Gaps = 52/387 (13%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           NL  L +  +K+  L D +  L +L  + L  ++L T    +   +NL  LDLG  +   
Sbjct: 91  NLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELETLPAAIGELENLRDLDLG-DNQFE 149

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLR 183
              + I+ L  LE L LD  K L S PT I   + L+ L L G + LK LP ++      
Sbjct: 150 SFPTVIRKLKNLERLILDNNK-LESFPTVIAELRKLQTLELLG-NKLKLLPDEIGELKNL 207

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             L L    +E LP  I  L N+  L +   K LE +  +I +L+ L+ + +HR  NL+ 
Sbjct: 208 QYLNLSLNKLESLPPEIGELKNLQHLFLGDNK-LEILPIAIGELENLQKLYLHRN-NLKT 265

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           L +    +   R  +   ++L        E+LP      K L  L+ +     E LP  +
Sbjct: 266 LPVEIEKLKELRILQLSGNKL--------ETLPVEIEKLKELRILQ-LSGNKLETLPVAI 316

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           G L+ L +L ++   +  LP  +G+L  L +L L+N ++L+ + S I +L  ++ +++ N
Sbjct: 317 GELENLQKLYLNDNKLETLPAAIGELDNLRELCLRN-NKLKILPSEIGELGDLQYLDLKN 375

Query: 364 CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
                                            +KLE+LP+++   K+L  L  +   KL
Sbjct: 376 ---------------------------------NKLETLPAAIGELKNLRELN-LSGNKL 401

Query: 424 ERLPDELGNLEA-LEELRVEGTGIREV 449
           E LP E+  L   ++ L + G  I EV
Sbjct: 402 ETLPIEIEKLSGSMQLLNLRGNNISEV 428



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 47/277 (16%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
           L +L++ G+K+  L D++  L +L+ ++L  +KL +  P++   +NL+ L LG  + L  
Sbjct: 184 LQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLG-DNKLEI 242

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRS 184
              +I  L  L+ L L R  +L +LP  I   K L+ L L G + L+ LP ++       
Sbjct: 243 LPIAIGELENLQKLYLHR-NNLKTLPVEIEKLKELRILQLSG-NKLETLPVEIEKLKELR 300

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI----------- 233
            L L G  +E LP +I  L N+ +L +   K LE + ++I +L  L  +           
Sbjct: 301 ILQLSGNKLETLPVAIGELENLQKLYLNDNK-LETLPAAIGELDNLRELCLRNNKLKILP 359

Query: 234 -RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
             I    +LQ+L++                     K  + E+LP+     K+L  L  + 
Sbjct: 360 SEIGELGDLQYLDL---------------------KNNKLETLPAAIGELKNLRELN-LS 397

Query: 293 CPNFERLPDEL----GNLQALNRLIIDGTAIRELPEG 325
               E LP E+    G++Q LN   + G  I E+ +G
Sbjct: 398 GNKLETLPIEIEKLSGSMQLLN---LRGNNISEVGDG 431


>gi|108740451|gb|ABG01581.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 202/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + + + + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +   I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPIHI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPI-HINLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             + + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 IHINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|77696213|gb|ABB00841.1| disease resistance protein [Arabidopsis lyrata]
          Length = 385

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 6/224 (2%)

Query: 14  TFSKMTELRLLKFCGSKNKC--MVHSLEGVPFTE-LRYFEWHQFPLKTLN-ILHWENLVS 69
           +F +M  LR LK   S++     VH  E + F+  LR   W  +P K+L      + LV 
Sbjct: 44  SFKRMPNLRFLKVFKSRDDGNNRVHIPEEIEFSRRLRLLHWEAYPSKSLPPTFQPQYLVE 103

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L MP S++ +LW++ Q L  LK+++L  S+ L +LPDLS A NLE LDL YC SL E  S
Sbjct: 104 LYMPSSQLEKLWEETQPLTHLKKMNLFASRHLKELPDLSNATNLERLDLSYCESLVEIPS 163

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
           S  +L+KL+ L+++ C +L  +   ++   L+ + +RGCS L+N+P M++    + + + 
Sbjct: 164 SFSHLHKLQRLEMNNCINLQVISAHMNLASLETVNMRGCSRLRNIPVMSTN--INQMYMS 221

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
              +E +  SI+  + +  L I S  +L+ I+     L+ L+ I
Sbjct: 222 RTAVEGMSPSIRFCARLERLSISSSGKLKAITHLPMSLKQLDLI 265



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR---PESLPSGQC--MFKSLTSLEI- 290
           R PNL+FL++     DG      P  E++  +  R    E+ PS      F+    +E+ 
Sbjct: 47  RMPNLRFLKVFKSRDDGNNRVHIPE-EIEFSRRLRLLHWEAYPSKSLPPTFQPQYLVELY 105

Query: 291 IDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +     E+L +E   L  L ++ +     ++ELP+ L     L +L+L  C  L  I SS
Sbjct: 106 MPSSQLEKLWEETQPLTHLKKMNLFASRHLKELPD-LSNATNLERLDLSYCESLVEIPSS 164

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC-- 407
              L  ++ +E++NC NL    ++   +++ + +E +      +  CS+L ++P      
Sbjct: 165 FSHLHKLQRLEMNNCINL----QVISAHMNLASLETV-----NMRGCSRLRNIPVMSTNI 215

Query: 408 --MFKSLTSLE-----IIDCKKLERLP-DELGNLEALEELRVEGTGIREVPKSLAQLALS 459
             M+ S T++E     I  C +LERL     G L+A+  L          P SL QL L 
Sbjct: 216 NQMYMSRTAVEGMSPSIRFCARLERLSISSSGKLKAITHL----------PMSLKQLDLI 265

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
              ++  S        LY+      L +  C+    LP+  G+L +L
Sbjct: 266 DSDIETISECIKALHLLYI------LNLSGCRRLASLPELPGSLRFL 306



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 38/290 (13%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S+LE L         L  + +   + L+ LPD L N   LE L +     + E+P S + 
Sbjct: 109 SQLEKLWEETQPLTHLKKMNLFASRHLKELPD-LSNATNLERLDLSYCESLVEIPSSFSH 167

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L +L++  C + + + + +    +L SLE ++ +   RL +       +  + +  T
Sbjct: 168 LHKLQRLEMNNCINLQVISAHM----NLASLETVNMRGCSRLRNIPVMSTNINQMYMSRT 223

Query: 515 AIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           A+  +  S+   + LE L +S +     +  +P SL QL       L ++++E I E + 
Sbjct: 224 AVEGMSPSIRFCARLERLSISSSGKLKAITHLPMSLKQLD------LIDSDIETISECIK 277

Query: 571 PLSSLKYLDLFE----NNLDRIPEYLRSFPT----SIPSEFTSL---RLSVDLRNCLKLD 619
            L  L  L+L       +L  +P  LR        S+ + F  L   +  ++  NC KL 
Sbjct: 278 ALHLLYILNLSGCRRLASLPELPGSLRFLMADHCESLETVFCPLNTPKAELNFTNCFKLG 337

Query: 620 PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
                EI++           + +  +   PG E+P  F HQ  G+T++++
Sbjct: 338 QQARREIVQ----------RSLLLGTTLLPGREVPAEFNHQGKGNTLTIR 377


>gi|108740457|gb|ABG01584.1| disease resistance protein [Arabidopsis thaliana]
          Length = 400

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +   I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPIXI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 169/375 (45%), Gaps = 69/375 (18%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII---DCPNFERLPDEL 303
              N+       Q   EL LK C + E LP    +  +L SL+I+   DC   +R P+  
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLP----IXINLESLDILVLNDCSMLKRFPEIS 268

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
            N++A   L + GTAI E+P           L +++   L+ +  S F            
Sbjct: 269 TNVRA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF------------ 302

Query: 364 CSNLKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKS 411
             NL  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  S
Sbjct: 303 -DNLVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDS 358

Query: 412 LTSLEIIDCKKLERL 426
           L  ++  DC+ LERL
Sbjct: 359 LKWIDAEDCESLERL 373



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             + + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 IXINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 36/244 (14%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG +  E       L SL+ L
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPIXINLESLDIL 253

Query: 533 VLSD 536
           VL+D
Sbjct: 254 VLND 257


>gi|297791265|ref|XP_002863517.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309352|gb|EFH39776.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1124

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 70/373 (18%)

Query: 14  TFSKMTELRLLKFCGS------KNKCMVHSLEGV--PFTELRYFEWHQFPLKTL-NILHW 64
            F+KM  LR LK   S      +  C ++  +G+  P  E+RY +W +FPL+ L +    
Sbjct: 368 VFTKMCNLRYLKLYSSACPLECEGDCKLNFPDGLSFPLKEVRYLDWLKFPLEELPSDFTP 427

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           ENL+ LK+P SK+ Q+W   ++   LK +DL  S++L  L   S A NL  L+L  CSSL
Sbjct: 428 ENLIDLKLPYSKIKQVWKVSKDTPKLKWVDLNNSRMLQTLSGFSKAPNLLRLNLEGCSSL 487

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                 ++ +  L  L+L  C  L  LP  I+   L+ L+L GCSNL+   ++ S +L  
Sbjct: 488 VCLSEEMRTMESLVFLNLRGCTGLRHLP-DINLSSLRTLILSGCSNLQEF-RLISENL-D 544

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G  IE+LPS I  L  +  L +  C+RL ++   I KL+ L+ + +  C NL+  
Sbjct: 545 YLYLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKLKSLKELILSGCSNLKSF 604

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                                                            PN E       
Sbjct: 605 -------------------------------------------------PNVEE------ 609

Query: 305 NLQALNRLIIDGTAIRELPE---GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           N++    L++DGT+I E+P+   G   ++ L +L L     +  + S I +L  ++ +++
Sbjct: 610 NMENFRVLLLDGTSIEEVPKILHGNNSISFLRRLSLSRNDVISSLGSDISQLYHLKWLDL 669

Query: 362 SNCSNLKGFPEIP 374
             C  L+    +P
Sbjct: 670 KYCKKLRCLSTLP 682



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 169/408 (41%), Gaps = 63/408 (15%)

Query: 381 SGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD-ELGNL----- 433
           SG  + P+ + L L  CS L  L   +   +SL  L +  C  L  LPD  L +L     
Sbjct: 468 SGFSKAPNLLRLNLEGCSSLVCLSEEMRTMESLVFLNLRGCTGLRHLPDINLSSLRTLIL 527

Query: 434 -------------EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
                        E L+ L ++GT I ++P  + +L  L  L LK+C    SLP  +   
Sbjct: 528 SGCSNLQEFRLISENLDYLYLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKL 587

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL---GQLSSLEWLVLSD 536
           KSL  L +  C N    P+   N+E  +VL + GT+I EVP+ L     +S L  L LS 
Sbjct: 588 KSLKELILSGCSNLKSFPNVEENMENFRVLLLDGTSIEEVPKILHGNNSISFLRRLSLSR 647

Query: 537 NN-LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN-NLDRIPEYLRS 594
           N+ +  +   ++QL  L  L L      R    L P  +L+ LD     +L+ +     +
Sbjct: 648 NDVISSLGSDISQLYHLKWLDLKYCKKLRCLSTLPP--NLQCLDAHGCISLETV-----T 700

Query: 595 FPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYF------ 648
            P +       +       NC KL+    ++I      K  +  + +   S  F      
Sbjct: 701 SPLAFLMPMEDIHSMFIFTNCCKLNDAAKNDIASHIRRKCQLISDDHHNGSFVFRALIGT 760

Query: 649 --PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS----------VSECC 696
             PG E+P WF HQ+  S +  K P     NK +G A C +V+            V   C
Sbjct: 761 CYPGYEVPPWFSHQAFDSVVERKLPPHWCDNKFLGLALCAIVSFHDYRDQNNRLLVKCTC 820

Query: 697 RHESVEDDRKCNLFDV-VCDRRSEGYDSYTSSYLGKISHVESDHVFLG 743
             E++  D  C+ F V V      G +  T         VESDHVF+G
Sbjct: 821 EFENL--DASCSRFSVPVGGWFEPGNEPRT---------VESDHVFIG 857



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 133/301 (44%), Gaps = 43/301 (14%)

Query: 173 NLPKMTSCHLRST--LPLLGVGIEELPSSIKCLSNIGELLIYS-CKRLENISSSIFKLQF 229
           N P   S  L+    L  L   +EELPS     + I   L YS  K++  +S    KL++
Sbjct: 396 NFPDGLSFPLKEVRYLDWLKFPLEELPSDFTPENLIDLKLPYSKIKQVWKVSKDTPKLKW 455

Query: 230 --LESIRI-------HRCPNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKCPRPESLP 276
             L + R+        + PNL  L +  C+     S+E  + E    L L+ C     LP
Sbjct: 456 VDLNNSRMLQTLSGFSKAPNLLRLNLEGCSSLVCLSEEMRTMESLVFLNLRGCTGLRHLP 515

Query: 277 SGQCMFKSLTSLEIIDCPNFE--RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
                  SL +L +  C N +  RL  E      L+ L +DGTAI +LP  + +L  L  
Sbjct: 516 --DINLSSLRTLILSGCSNLQEFRLISE-----NLDYLYLDGTAIEDLPSEIVKLQKLIL 568

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIP 387
           L LK C  L  +   I KLKS++ + +S CSNLK FP +           +DG+ IE +P
Sbjct: 569 LNLKECRRLGSLPECIGKLKSLKELILSGCSNLKSFPNVEENMENFRVLLLDGTSIEEVP 628

Query: 388 SSV-----------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             +           L L++   + SL S +     L  L++  CKKL  L     NL+ L
Sbjct: 629 KILHGNNSISFLRRLSLSRNDVISSLGSDISQLYHLKWLDLKYCKKLRCLSTLPPNLQCL 688

Query: 437 E 437
           +
Sbjct: 689 D 689


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 184/377 (48%), Gaps = 51/377 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLN- 60
           E   N   FSKM +L+LL          +H+L    G  F    LR+  W  +P K+L  
Sbjct: 549 EADWNLEAFSKMCKLKLL---------YIHNLRLSLGPKFIPNALRFLSWSWYPSKSLPP 599

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + L  L +  S +  LW+ ++   +LK I+L YS  LT+ PD +   NLE L L  
Sbjct: 600 CFQPDELTELSLVHSNIDHLWNGIKYSRNLKSINLSYSINLTRTPDFTGIPNLEKLVLEG 659

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C++L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 660 CTNLVKVHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQ 719

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  IE+LPSSI                 E++S S+ +L  L  + I   P
Sbjct: 720 MKRLSKLSLGGTAIEKLPSSI-----------------EHLSESLVELD-LSGLVIREQP 761

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
             +FL+    N+  +      S  L  +K P P   L +    F SLT+L + DC   E 
Sbjct: 762 YSRFLKQ---NLIAS------SFGLFPRKRPHPLVPLLASLKHFSSLTTLNLNDCNLCEG 812

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+++G+L +L  L + G     L   +  L+ L  + ++NC  L+ +     +L + +
Sbjct: 813 EIPNDIGSLSSLESLELRGNNFVSLSASIHLLSKLKHINVENCRRLQQLP----ELPASD 868

Query: 358 SIEI--SNCSNLKGFPE 372
            + +   NC++L+ FP+
Sbjct: 869 YLRVVTDNCTSLQMFPD 885



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 233/495 (47%), Gaps = 84/495 (16%)

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            P+ L +L+L+        S ++++ + I   ++++SI +S   NL   P       D +G
Sbjct: 603  PDELTELSLVH-------SNIDHLWNGIKYSRNLKSINLSYSINLTRTP-------DFTG 648

Query: 383  IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            I  +   VL+   C+ L  +  S+ + K L      +CK ++ LP E+ N+E LE   V 
Sbjct: 649  IPNLEKLVLE--GCTNLVKVHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVS 705

Query: 443  G-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL-YVSKSLTSLE----IIDCKNFMR 495
            G + ++ +P+ + Q+  LSKL L   ++ E LPS + ++S+SL  L+    +I  + + R
Sbjct: 706  GCSKLKMIPEFVGQMKRLSKLSLGG-TAIEKLPSSIEHLSESLVELDLSGLVIREQPYSR 764

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL--QIIPESL 546
               +  NL    + +  G   R+ P        SL   SSL  L L+D NL    IP  +
Sbjct: 765  FLKQ--NL----IASSFGLFPRKRPHPLVPLLASLKHFSSLTTLNLNDCNLCEGEIPNDI 818

Query: 547  NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPE-----YLRSFPTSI 599
              LSSL SL+L  NN   +   +  LS LK++++ EN   L ++PE     YLR     +
Sbjct: 819  GSLSSLESLELRGNNFVSLSASIHLLSKLKHINV-ENCRRLQQLPELPASDYLRV----V 873

Query: 600  PSEFTSLRLSVDLR-------------NCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
                TSL++  D +             NCL    N+ +       +K+ +  ET+   S 
Sbjct: 874  TDNCTSLQMFPDPQDLCRIGNFEFNCVNCLSTVGNQDASYFLYSVLKRLLE-ETH-RSSE 931

Query: 647  YF----PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVE 702
            YF    PG+EIP+WF +QS G +++ K P    +   +GFA C ++    +     E + 
Sbjct: 932  YFRFVIPGSEIPEWFNNQSVGDSVTEKLPSDYMW---IGFAVCALIVPPDNPSAVPEKI- 987

Query: 703  DDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVF---LGSSIFAGENSCKRSDEF 759
               +C  +         G  S  + ++  +  + SDH+F   L       E++C  + +F
Sbjct: 988  -SLRCR-WPKGSPWTHSGVPSRGACFV--VKQIVSDHLFLLVLRKPENYLEDTCNEA-KF 1042

Query: 760  FFHIDRSCCEVKKCG 774
             F I+ +C +VKKCG
Sbjct: 1043 DFSIN-NCIKVKKCG 1056


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 171/363 (47%), Gaps = 27/363 (7%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L++ D      +P E+G L +L +L +    +  LP  +GQL  L++L L   ++L  + 
Sbjct: 31  LDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAG-NQLTSLP 89

Query: 348 SSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           + I +L S+E + + N + L   P        +   N+ G+ +  +P  + +L    +L 
Sbjct: 90  AEIGQLMSLEGLFL-NGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLF 148

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLER--LPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
              + L     L++L  +     +R  +P E+G L +LE L +    +  VP  + QLA 
Sbjct: 149 LSGNQLTSIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLAS 208

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            K      +   SLP+ +    SLT L  +D      LP EIG L  L+ L ++   +  
Sbjct: 209 LKWLNLHGNQLTSLPAGIGQLTSLTYL-FLDDNRLTSLPAEIGQLTSLERLYLRHNQLTS 267

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +P  +GQL+SLEWL L  N L  +P  + QL+SL  L L+ N L  +P  +  L+SLK L
Sbjct: 268 LPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTSLKAL 327

Query: 579 DLFENNLDRIPEYLRSFP------------TSIPSEFTSLRL--SVDLR-NCLKLDPNEL 623
            L  N L  +P  +                TS+P+E   L L   ++LR N L  +P  +
Sbjct: 328 GLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHNRLTSEPAAI 387

Query: 624 SEI 626
            E+
Sbjct: 388 REL 390


>gi|357514699|ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521660|gb|AET02114.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1184

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 154/351 (43%), Gaps = 54/351 (15%)

Query: 6   SEIQINPYTFSKMTELRLLKFC----GSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL 59
           + I ++   F+KM  LRLL F       K    VH  EG+ F    LR FEW  +PL  L
Sbjct: 543 TRINLSSKAFTKMPNLRLLAFKYHNRDVKGINYVHLPEGLDFLPNNLRSFEWSAYPLNYL 602

Query: 60  --NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
             N   W NLV L +P S + +LW+  QNL SL+RIDL++S  L + P  S A NL  +D
Sbjct: 603 PSNFSPW-NLVELHLPYSNLEKLWNGTQNLPSLERIDLRWSAHLIECPKFSNAPNLYGID 661

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           LG C S++    SI  L KLE LD+  CKSL SL +S  S+    L+   C NL+    M
Sbjct: 662 LGNCESISHVDPSIFNLPKLEWLDVSGCKSLESLYSSTRSQSQASLLADRCYNLQEFISM 721

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
              +   ++    +            S+I E L+      EN +                
Sbjct: 722 PQNNNDPSITTTWIYFS---------SHISESLV---DLPENFAY--------------- 754

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
             N++F         G+   EQ +     K  P P         F+ + SL   DC N  
Sbjct: 755 --NIEF--------SGSTMNEQDTFTTLHKVLPSP--------CFRYVKSLTFYDCNNIS 796

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +PD +  L  L  L + G  I  LPE +  L  L  LE + C  L+ I S
Sbjct: 797 EIPDSISLLSLLESLYLIGCPIISLPESINCLPRLMFLEARYCKMLQSIPS 847



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 42/218 (19%)

Query: 287 SLEIIDCPNFERLPD----ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           S  +I+CP F   P+    +LGN ++++ +     +I  LP+       L  L++  C  
Sbjct: 642 SAHLIECPKFSNAPNLYGIDLGNCESISHV---DPSIFNLPK-------LEWLDVSGCKS 691

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS--------------------- 381
           LE + SS  + +S  S+    C NL+ F  +P  N D S                     
Sbjct: 692 LESLYSST-RSQSQASLLADRCYNLQEFISMPQNNNDPSITTTWIYFSSHISESLVDLPE 750

Query: 382 ----GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
                IE   S++ + +  + L  +  S C F+ + SL   DC  +  +PD +  L  LE
Sbjct: 751 NFAYNIEFSGSTMNEQDTFTTLHKVLPSPC-FRYVKSLTFYDCNNISEIPDSISLLSLLE 809

Query: 438 ELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            L + G  I  +P+S+  L  L  L+ + C   +S+PS
Sbjct: 810 SLYLIGCPIISLPESINCLPRLMFLEARYCKMLQSIPS 847


>gi|15222527|ref|NP_176560.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324940|gb|AAG52419.1|AC011622_7 putative disease resistance protein; 27010-23648 [Arabidopsis
           thaliana]
 gi|332196017|gb|AEE34138.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 966

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 158/305 (51%), Gaps = 28/305 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           +S + +++ I+   F ++  LR L    ++      +H  E + F  +LR   W  +P K
Sbjct: 534 ISTLLNDVYISAEAFKRIRNLRFLSIYKTRLDTNVRLHLSEDMVFPPQLRLLHWEVYPGK 593

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L +    E LV L +  +++ +LW+ +Q L +LK+++L  S  L  LP+LS A NLE+L
Sbjct: 594 SLPHTFRPEYLVELNLRDNQLEKLWEGIQPLTNLKKMELLRSSNLKVLPNLSDATNLEVL 653

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C SL E   SI  L+KLE L +D C+ L  +PT  +   L+ L + GC  LKN+P 
Sbjct: 654 NLALCESLVEIPPSIGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLGMMGCWQLKNIPD 713

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           +++    +TL +    +E+LP SI+  S +  L IY    + +  + I    +LE     
Sbjct: 714 ISTN--ITTLKITDTMLEDLPQSIRLWSGLQVLDIYGSVNIYHAPAEI----YLEG---- 763

Query: 237 RCPNLQFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           R  +++  ++P C  ++DG +       EL +  CP+  SLP    +  SL  L +  C 
Sbjct: 764 RGADIK--KIPDCIKDLDGLK-------ELHIYGCPKIVSLPE---LPSSLKRLIVDTCE 811

Query: 295 NFERL 299
           + E L
Sbjct: 812 SLETL 816



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 182/454 (40%), Gaps = 97/454 (21%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L L++ ++LE +   I  L +++ +E+   SNLK  P +     D + +E     VL
Sbjct: 604 LVELNLRD-NQLEKLWEGIQPLTNLKKMELLRSSNLKVLPNLS----DATNLE-----VL 653

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG----TGIR 447
            L  C  L  +P S+     L  L +  C+KL+ +P    NL +LE L + G      I 
Sbjct: 654 NLALCESLVEIPPSIGNLHKLEKLIMDFCRKLKVVPTHF-NLASLESLGMMGCWQLKNIP 712

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           ++  ++  L ++   L      E LP  + +   L  L+I    N    P EI       
Sbjct: 713 DISTNITTLKITDTML------EDLPQSIRLWSGLQVLDIYGSVNIYHAPAEI------- 759

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L  +G  I+++P+ +  L  L+ L             +     +VSL    ++L+R+  
Sbjct: 760 YLEGRGADIKKIPDCIKDLDGLKEL------------HIYGCPKIVSLPELPSSLKRLI- 806

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
            +D   SL              E L  FP      F S    +   NC KL   E   +I
Sbjct: 807 -VDTCESL--------------ETLVHFP------FESAIEDLYFSNCFKLG-QEARRVI 844

Query: 628 KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
                KQS        +  + PG  +P  F +++ G+  SL  P  T   ++     CVV
Sbjct: 845 ----TKQS--------RDAWLPGRNVPAEFHYRAVGN--SLTIPTDTYECRI-----CVV 885

Query: 688 VACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIF 747
           ++       + + VE       FD++C +R  G+ S     L  +  V+++H+F+G   F
Sbjct: 886 IS------PKQKMVE------FFDLLCRQRKNGF-STGQKRLQLLPKVQAEHLFIGH--F 930

Query: 748 AGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
              +         F       ++ +CGI   H  
Sbjct: 931 TLSDKLDSGVLLEFSTSSKDIDIIECGIQIFHGH 964



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 47/192 (24%)

Query: 286 TSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           T+LE+++   C +   +P  +GNL  L +LI+D                        C +
Sbjct: 648 TNLEVLNLALCESLVEIPPSIGNLHKLEKLIMDF-----------------------CRK 684

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           L+ + +  F L S+ES+ +  C  LK  P+I   NI          + LK+   + LE L
Sbjct: 685 LKVVPTH-FNLASLESLGMMGCWQLKNIPDIS-TNI----------TTLKITD-TMLEDL 731

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKL 461
           P S+ ++  L  L+I     +   P E+        L   G  I+++P  +  L  L +L
Sbjct: 732 PQSIRLWSGLQVLDIYGSVNIYHAPAEI-------YLEGRGADIKKIPDCIKDLDGLKEL 784

Query: 462 KLKKCSSFESLP 473
            +  C    SLP
Sbjct: 785 HIYGCPKIVSLP 796


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 176/339 (51%), Gaps = 30/339 (8%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L+ L  L +   ++  LP+ +GQL  L +L L N  +L  +   I +L++++ 
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL-NSQKLTTLPKEIGQLRNLQE 144

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +++S  ++L   P+      +   +E +    L  N+   L +LP  +   K+L  L++ 
Sbjct: 145 LDLS-FNSLTTLPK------EVGQLENLQRLDLHQNR---LATLPMEIGQLKNLQELDL- 193

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  KL  LP E+  L  L+EL +    +  +PK + QL  L  L L   +   +LP  + 
Sbjct: 194 NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIG 252

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+WL L  N
Sbjct: 253 ELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L I+P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN L           T
Sbjct: 312 QLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL-----------T 360

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           ++P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 361 TLPKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 395



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 236/511 (46%), Gaps = 81/511 (15%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           T L   +QN + ++ +DL+Y KL T LP ++   QNL+ LDL + +SLT     I  L  
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQKL-TILPKEIGQLQNLQRLDLSF-NSLTILPKEIGQLRN 95

Query: 137 LEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
           L+ LDL    SLT+LP  +   + L+RL L       N  K+T+                
Sbjct: 96  LQELDLS-FNSLTTLPKEVGQLENLQRLNL-------NSQKLTT---------------- 131

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP  I  L N+ EL + S   L  +   + +L+ L+ + +H+                  
Sbjct: 132 LPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLDLHQN----------------- 173

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                          R  +LP      K+L  L++ +      LP E+  L+ L  L + 
Sbjct: 174 ---------------RLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLH 217

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
              +  LP+ +GQL  L  L L   ++L  +   I +L++++++ + + + L   P+   
Sbjct: 218 RNQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPK--- 272

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
              +   ++ +   VL+ N+ +   +LP  +   ++L  L++    +L  LP E+G L+ 
Sbjct: 273 ---EIGELQNLEILVLRENRIT---ALPKEIGQLQNLQWLDL-HQNQLTILPKEIGQLQN 325

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN-- 492
           L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L ++D  N  
Sbjct: 326 LQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRVLDLDNNQ 381

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
              LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ + QL +L
Sbjct: 382 LTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNL 441

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             L L  N L   P+ +  L +L+ L L+ N
Sbjct: 442 QELCLDENQLTTFPKEIRQLKNLQELHLYLN 472



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 163/323 (50%), Gaps = 29/323 (8%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L +   ++  LP+ +GQL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EI-PFCNIDGSGIERIP 387
             L +L+L + + L  +   I +LK+++ +++ N + L   P EI    N+    + R  
Sbjct: 163 ENLQRLDL-HQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHR-- 218

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
                    ++L +LP  +   ++L +L +I   +L  LP E+G L+ L+ L +    + 
Sbjct: 219 ---------NQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQLT 268

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
            +PK + +L   ++ + + +   +LP  +   ++L  L++        LP EIG L+ L+
Sbjct: 269 TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTILPKEIGQLQNLQ 327

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L +    +  +P+ +GQL +L+ L L +N L  +P+ + QL +L  L L NN L  +P+
Sbjct: 328 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 387

Query: 568 RLDPLSSLKYLDLFENNLDRIPE 590
            +  L SL+ L L  N L  +P+
Sbjct: 388 EVLRLQSLQVLALGSNRLSTLPK 410



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 201/429 (46%), Gaps = 60/429 (13%)

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTET 127
           +L +   K+T L  ++  L +L+R+DL ++  LT LP ++   +NL+ LDL + +SLT  
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNS-LTILPKEIGQLRNLQELDLSF-NSLTTL 109

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRST 185
              +  L  L+ L+L+  K LT+LP  I   + L+ L L   ++L  LPK +        
Sbjct: 110 PKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQR 167

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR-----CPN 240
           L L    +  LP  I  L N+ EL + S K L  +   I +L+ L+ + +HR      P 
Sbjct: 168 LDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDLHRNQLTTLPK 226

Query: 241 L--QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL--EIIDCPNF 296
              Q   + + N+  T+    P      K+    ++L +   +   LT+L  EI +  N 
Sbjct: 227 EIGQLQNLKTLNLIVTQLTTLP------KEIGELQNLKTLNLLDNQLTTLPKEIGELQNL 280

Query: 297 E----------RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           E           LP E+G LQ L  L +    +  LP+ +GQL  L +L+L + ++L  +
Sbjct: 281 EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDL-HQNQLTTL 339

Query: 347 SSSIFKLKSVESI------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
              I +L++++ +            EI    NL+        ++D + +  +P  VL+L 
Sbjct: 340 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLR------VLDLDNNQLTTLPKEVLRLQ 393

Query: 395 KC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
                    ++L +LP  +   ++L  L +I   +L  LP E+G L+ L+EL ++   + 
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQLQNLQVLALI-SNQLTTLPKEIGQLQNLQELCLDENQLT 452

Query: 448 EVPKSLAQL 456
             PK + QL
Sbjct: 453 TFPKEIRQL 461



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L LS N+L I+P+ + QL +L  L LS N+L  +
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
           P+ +  L +L+ L+L    L           T++P E   LR
Sbjct: 110 PKEVGQLENLQRLNLNSQKL-----------TTLPKEIGQLR 140


>gi|2245047|emb|CAB10466.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1038

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 182/402 (45%), Gaps = 59/402 (14%)

Query: 10  INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLV 68
           I+  +F  M  L+ L   G     +  SL  +P  +LR  +W + PLK L      + L+
Sbjct: 521 IDEKSFQGMRNLQCLSVTGDYMD-LPQSLVYLP-PKLRLLDWDRCPLKCLPYSFKADYLI 578

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            L M GSK+ +LW+    L SLKR+++  S+ L ++ DLS A+NLE L+L  C SL    
Sbjct: 579 QLTMMGSKLEKLWEGTVPLGSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLS 638

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP------------- 175
           SSIQ   KL  LD+  C  L S PT ++ + L+ L L    NL+N P             
Sbjct: 639 SSIQNAIKLIYLDMRGCTKLESFPTHLNLESLEYLGLLYYDNLRNFPVFKMETSTTSPHG 698

Query: 176 ---KMTSCHLRSTLPLLGVGIEELPSSIKCL------SNIGELLIYSCKRLENISSSIFK 226
              ++ +C     LP    G++ L   ++C+      +++  L++   + LE +   +  
Sbjct: 699 IEIRVENCIWNKNLP----GLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQS 754

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L  L  + +  C NL   E+P        SK      L L  C    ++PS     + L 
Sbjct: 755 LASLVEMDMSECGNLT--EIPDL------SKATNLVNLYLSNCKSLVTVPSTIGNLQKLV 806

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDG---------------------TAIRELPEG 325
            LE+ +C   E LP ++ NL +L  L + G                     TAI E+P  
Sbjct: 807 RLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCC 865

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           +   + L+ L +  C  L+ IS +IF+L  ++ ++ + C  +
Sbjct: 866 IENFSWLTVLMMYCCKRLKNISPNIFRLTILKLVDFTECRGV 907



 Score = 42.4 bits (98), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 24/250 (9%)

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP--EIPFCNIDGSGIERIPSSVLK 392
           L+++ C++LE   + +  L+S+E + +    NL+ FP  ++        GIE      ++
Sbjct: 650 LDMRGCTKLESFPTHL-NLESLEYLGLLYYDNLRNFPVFKMETSTTSPHGIE------IR 702

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           +  C   ++LP        L  L  + C   E  P++L  L       +E   + E  +S
Sbjct: 703 VENCIWNKNLPG----LDYLACL--VRCMPCEFRPNDLVRLIVRGNQMLEK--LWEGVQS 754

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           LA L   ++ + +C +   +P  L  + +L +L + +CK+ + +P  IGNL+ L  L +K
Sbjct: 755 LASLV--EMDMSECGNLTEIPD-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMK 811

Query: 513 GTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
                EV  +   LSSL+ L LS  ++L+  P       S+  L L N  +E +P  ++ 
Sbjct: 812 ECTGLEVLPTDVNLSSLKMLDLSGCSSLRTFPLISK---SIKWLYLENTAIEEVPCCIEN 868

Query: 572 LSSLKYLDLF 581
            S L  L ++
Sbjct: 869 FSWLTVLMMY 878


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 186/374 (49%), Gaps = 35/374 (9%)

Query: 273 ESLPSGQCMFKSLTSLE--IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE---GLG 327
           ++LP+    F++L  LE   I+   F+ LPDEL  L+ L  L I    I  LPE   G  
Sbjct: 103 DNLPAS---FRNLNKLEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGFT 159

Query: 328 QLALLSKLELKNCSELEY--ISSSIFKLKSVESI----------EISNCSNLKGFPEIPF 375
            L++L   ++   S+ +   + +++ K K   SI           +    +   F E+  
Sbjct: 160 ALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLDFSSFTELKT 219

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            N+    ++  P S++ L     L        S+P+ +     L  L+  +   L  +P 
Sbjct: 220 LNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSE-NNLTTIPQ 278

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           E+G L  L+EL +    I+E+ ++L +L+ L+KL L K ++F+ LP+ +   K L  L I
Sbjct: 279 EIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTK-NAFQQLPNAIGQLKLLEELHI 337

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
                  ++P+ IG+L +L+ LT+  + +  +PES+G+L+ LE L + +N ++++PES  
Sbjct: 338 GFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFG 397

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFPTSI--PSE 602
            L SL  L++  N L ++P+    L  LK LDL EN L  +P   EY+ +    +   +E
Sbjct: 398 DLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNNE 457

Query: 603 FTSLRLSVDLRNCL 616
            T+L  S+    CL
Sbjct: 458 LTTLPFSIGQLECL 471



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 232/494 (46%), Gaps = 54/494 (10%)

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS 169
           +NL+ LDL   +SL    +S + LNKLE L ++  K    LP  +   K L+ L +R  +
Sbjct: 90  ENLKFLDLK-GNSLDNLPASFRNLNKLEHLSIETNK-FKELPDELSLLKKLRILKIRE-N 146

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS-CKRLENISSSIFKLQ 228
            + +LP+       + L +L +        I   S+  +  +Y+  K+ +   S ++ L 
Sbjct: 147 QIHSLPEFREGF--TALSMLYI------DDINLSSDWQKYKVYTNLKKAKESPSIVYHLD 198

Query: 229 FLESIRIHRCPNLQ-FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS--- 284
                 + R  +   F E+ + N+     KE P S + L      E L  G+  F S   
Sbjct: 199 LSVQFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHL---EYLHLGRNNFLSVPA 255

Query: 285 ----LTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL- 337
               L+ L+ +D    N   +P E+G L  L  L +    I+EL E LG+L+ L+KL L 
Sbjct: 256 EIAQLSHLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLT 315

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSV 390
           KN    + + ++I +LK +E + I     L   PE       +    +  SG+  +P S+
Sbjct: 316 KNA--FQQLPNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESI 373

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            KLN+          L MF +          ++  LP+  G+LE+L+ LR+    + ++P
Sbjct: 374 GKLNQLE-------LLSMFNN----------RIRVLPESFGDLESLKYLRIHKNKLTQLP 416

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            S   L L K      +   +LP+ +   ++LT L ++D      LP  IG LE L  L+
Sbjct: 417 DSFGNLRLLKELDLSENRLTTLPASIEYMENLTIL-VLDNNELTTLPFSIGQLECLTSLS 475

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
                I+ +P SLG+L +LE L LS NN+Q +P S+  LSSL  L +S+N   R P+ + 
Sbjct: 476 AYINTIKTLPSSLGKLKNLENLNLSYNNIQKLPRSIRHLSSLFVLDISDNKFSRFPKVIF 535

Query: 571 PLSSLKYLDLFENN 584
            L  LK  +L EN+
Sbjct: 536 RLHQLKKCNLEEND 549



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 194/443 (43%), Gaps = 60/443 (13%)

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYS--CKRLENISSSIFKLQFLESIR---IHRCPN 240
           L L G  ++ LP+S + L+ +  L I +   K L +  S + KL+ L+ IR   IH  P 
Sbjct: 95  LDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILK-IRENQIHSLPE 153

Query: 241 LQ--FLEMPSCNIDGT----------------RSKEQPSSELKLK-----KCPRPESLPS 277
            +  F  +    ID                  ++KE PS    L        PRP    S
Sbjct: 154 FREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLDFSS 213

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
               F  L +L +  C + +  P  +  L  L  L +       +P  + QL        
Sbjct: 214 ----FTELKTLNLSYC-DLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQL-------- 260

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
              S L+Y+  S   L ++   EI   S+LK        N+  + I+ +  ++ +L+K +
Sbjct: 261 ---SHLKYLDFSENNLTTIPQ-EIGRLSDLKE------LNLAFNQIKELSENLGELSKLT 310

Query: 398 KL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           KL       + LP+++   K L  L I     L ++P+ +G+L  L  L V  +G+  +P
Sbjct: 311 KLNLTKNAFQQLPNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLP 370

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           +S+ +L   +L     +    LP      +SL  L I   K   +LPD  GNL  LK L 
Sbjct: 371 ESIGKLNQLELLSMFNNRIRVLPESFGDLESLKYLRIHKNK-LTQLPDSFGNLRLLKELD 429

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    +  +P S+  + +L  LVL +N L  +P S+ QL  L SL    N ++ +P  L 
Sbjct: 430 LSENRLTTLPASIEYMENLTILVLDNNELTTLPFSIGQLECLTSLSAYINTIKTLPSSLG 489

Query: 571 PLSSLKYLDLFENNLDRIPEYLR 593
            L +L+ L+L  NN+ ++P  +R
Sbjct: 490 KLKNLENLNLSYNNIQKLPRSIR 512



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 59/231 (25%)

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
            ++ + ++  P  + +++ LEEL +    I  +P+ + +L   K    K +S ++LP+  
Sbjct: 50  FLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPASF 109

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
                L  L  I+   F  LPDE+  L+ L++L I+   I  +PE     ++L  L + D
Sbjct: 110 RNLNKLEHLS-IETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGFTALSMLYIDD 168

Query: 537 NNLQ-------------------------------IIPESLNQLSSLVSLKLSN------ 559
            NL                                 +P  L+  SS   LK  N      
Sbjct: 169 INLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLD-FSSFTELKTLNLSYCDL 227

Query: 560 --------------------NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
                               NN   +P  +  LS LKYLD  ENNL  IP+
Sbjct: 228 KEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENNLTTIPQ 278



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
            KNF   P  I +++ L+ L +    I  +PE + +L +L++L L  N+L  +P S   L
Sbjct: 56  IKNF---PISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPASFRNL 112

Query: 550 SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           + L  L +  N  + +P+ L  L  L+ L + EN +  +PE+   F
Sbjct: 113 NKLEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGF 158



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L +   +I+  P S+  + +LE L LS N + +IPE +++L +L  L L  N+L+ +P  
Sbjct: 49  LFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLPAS 108

Query: 569 LDPLSSLKYLDLFENNLDRIPEYL 592
              L+ L++L +  N    +P+ L
Sbjct: 109 FRNLNKLEHLSIETNKFKELPDEL 132



 Score = 39.7 bits (91), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 41/68 (60%)

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
           S +  L L+  +++  P S+  + +L  L LS+N +  IPE +D L +LK+LDL  N+LD
Sbjct: 44  SDVYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLD 103

Query: 587 RIPEYLRS 594
            +P   R+
Sbjct: 104 NLPASFRN 111


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 190/438 (43%), Gaps = 45/438 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNIL-HWE 65
           E   N   FSK ++L+ L  C  +   +   L  +P + L+   W   PLKTL I    +
Sbjct: 549 EAHWNTEAFSKTSQLKFLSLCEMQ---LPLGLSCLP-SSLKVLHWRGCPLKTLPITTQLD 604

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV + +  SK+ QLW  V+ +  +K ++L +SK L +LPD S   NLE L L  C  L 
Sbjct: 605 ELVDITLSHSKIEQLWQGVKFMEKMKYLNLAFSKNLKRLPDFSGVPNLEKLILEGCEGLI 664

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  K+ +++L  CKSL SL   +    LK+L+L G S  K LP+        S
Sbjct: 665 EVHPSLAHHKKVVLVNLKDCKSLKSLSGKLEMSSLKKLILSGSSKFKFLPEFGEKMENLS 724

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G  I +LP S+  L  +  L +  CK L  +  +I  L  L ++ I  C  L  L
Sbjct: 725 MLALEGTDIRKLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITLDISGCSKLCRL 784

Query: 245 E--------MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII----- 291
                    +   + + T   E PSS   L      + L    C   S TS+        
Sbjct: 785 PDGLKEIKCLEELHANDTAIDELPSSIFYLDSL---KVLSFAGCQGPSTTSMNWFLPFNL 841

Query: 292 -----DCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELE 344
                   N  RLP  +  L +L  L +    + E   P     L+ L  L+L   +   
Sbjct: 842 MFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEESFPNYFHHLSSLKSLDLTG-NNFV 900

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL-- 402
            I SSI KL  +  + ++ C  L+  PE+P           +  + L  + C  L+++  
Sbjct: 901 IIPSSISKLSRLRFLCLNWCQKLQLLPELP-----------LTMTQLNASNCDSLDTMKF 949

Query: 403 -PSSLC-MFKSLTSLEII 418
            P+ LC +F S   L  +
Sbjct: 950 NPAKLCSLFASPRKLSYV 967



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 158/367 (43%), Gaps = 60/367 (16%)

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            ++ L  C  L+SL   L M  SL  L +    K + LP+    +E L  L +EGT IR++
Sbjct: 678  LVNLKDCKSLKSLSGKLEM-SSLKKLILSGSSKFKFLPEFGEKMENLSMLALEGTDIRKL 736

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P SL +L  L+ L LK C S   LP  ++   SL +L+I  C    RLPD +  ++ L+ 
Sbjct: 737  PLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITLDISGCSKLCRLPDGLKEIKCLEE 796

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSD------------------------NNLQIIPE 544
            L    TAI E+P S+  L SL+ L  +                         +N   +P 
Sbjct: 797  LHANDTAIDELPSSIFYLDSLKVLSFAGCQGPSTTSMNWFLPFNLMFGSQPASNGFRLPS 856

Query: 545  SLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIP------------- 589
            S+  L SL  L LS  NL  E  P     LSSLK LDL  NN   IP             
Sbjct: 857  SVMGLPSLEYLNLSYCNLSEESFPNYFHHLSSLKSLDLTGNNFVIIPSSISKLSRLRFLC 916

Query: 590  ----EYLRSFPTSIPSEFTSLRLS-VDLRNCLKLDPNELSEIIKDGWMKQSVNGETY--- 641
                + L+  P  +P   T L  S  D  + +K +P +L  +      K S   E Y   
Sbjct: 917  LNWCQKLQLLP-ELPLTMTQLNASNCDSLDTMKFNPAKLCSLFASP-RKLSYVQELYKRF 974

Query: 642  ------ITK-SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVS- 693
                   T+  M  PG+EIP WF  Q + S   +  P     ++ +GFA C ++      
Sbjct: 975  EDRCLPTTRFDMLIPGDEIPSWFVPQRSVSWAKVHIPNNFPQDEWVGFALCFLLVSYADP 1034

Query: 694  -ECCRHE 699
             E C+HE
Sbjct: 1035 PELCKHE 1041


>gi|26450900|dbj|BAC42557.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|29028928|gb|AAO64843.1| At1g56520 [Arabidopsis thaliana]
          Length = 547

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 150/304 (49%), Gaps = 25/304 (8%)

Query: 7   EIQINPYTFSKMTELRLLK-FCGSKNK-CMVHSLEGVPF-TELRYFEWHQFPLKTLNILH 63
           E+ IN   F KM  L +LK F G+  +   +H  E +   + +R   W  +P K+     
Sbjct: 192 ELVINKKAFKKMCNLLILKVFNGTDPRDSKLHVPEEMELPSSIRLLHWEAYPRKSFR-FG 250

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            ENLV+L M  S++ +LW   Q L +LK ++L  S  L +LPDLS A NLE LD+  C++
Sbjct: 251 PENLVTLNMEYSELEKLWKGTQPLANLKEMNLCGSSCLKELPDLSKAANLERLDVAECNA 310

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E  SS+  L+K+  L ++ C+SL  +PT I+   LK + +  C  LK+ P + +    
Sbjct: 311 LVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIINIHDCPRLKSFPDVPTS--L 368

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
             L +   G++ELP+S +  + +  L I S + L+  S+             H    L+ 
Sbjct: 369 EELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFST-------------HLPMGLRK 415

Query: 244 LEMPSCNIDGTRSKEQPSSE---LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L++ +C I+      +       LKL  C R  SLP   C   SL  L   DC + ER+ 
Sbjct: 416 LDLSNCGIEWVTDSIKDLHNLYYLKLSGCKRLVSLPELPC---SLECLFAEDCTSLERVS 472

Query: 301 DELG 304
           D L 
Sbjct: 473 DSLN 476



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 50/207 (24%)

Query: 235 IHRCPNLQFLEMPSCN----IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           + +  NL+ L++  CN    I  + +       L ++ C   E +P+      +L SL+I
Sbjct: 294 LSKAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPT----LINLASLKI 349

Query: 291 I---DCPNFERLPDELGNLQALNRLIIDGTAIRELPE------GLGQLAL---------- 331
           I   DCP  +  PD   +L+    L+I+ T ++ELP       G+  L +          
Sbjct: 350 INIHDCPRLKSFPDVPTSLE---ELVIEKTGVQELPASFRHCTGVTTLYICSNRNLKTFS 406

Query: 332 ------LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI------D 379
                 L KL+L NC  +E+++ SI  L ++  +++S C  L   PE+P C++      D
Sbjct: 407 THLPMGLRKLDLSNCG-IEWVTDSIKDLHNLYYLKLSGCKRLVSLPELP-CSLECLFAED 464

Query: 380 GSGIER------IPSSVLKLNKCSKLE 400
            + +ER      IP++     KC  L+
Sbjct: 465 CTSLERVSDSLNIPNAQFNFIKCFTLD 491



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 34/224 (15%)

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK- 395
           L N  E+    SS  K    E  ++S  +NL+   ++  CN     +  IPSSV  L+K 
Sbjct: 274 LANLKEMNLCGSSCLK----ELPDLSKAANLERL-DVAECN----ALVEIPSSVANLHKI 324

Query: 396 -------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                  C  LE +P+ L    SL  + I DC +L+  PD      +LEEL +E TG++E
Sbjct: 325 VNLHMESCESLEVIPT-LINLASLKIINIHDCPRLKSFPDVPT---SLEELVIEKTGVQE 380

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +P S          L  CS+        ++   L  L++ +C     + D I +L  L  
Sbjct: 381 LPASFRHCT-GVTTLYICSNRNLKTFSTHLPMGLRKLDLSNC-GIEWVTDSIKDLHNLYY 438

Query: 509 LTIKG----TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN 547
           L + G     ++ E+P       SLE L   D  +L+ + +SLN
Sbjct: 439 LKLSGCKRLVSLPELP------CSLECLFAEDCTSLERVSDSLN 476


>gi|108740437|gb|ABG01574.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + +  C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLXGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLXGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 179/392 (45%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIID---GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D    + + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLXGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 190/399 (47%), Gaps = 68/399 (17%)

Query: 311  RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
            +L + G    ELP     LAL S L L+NC +LE + S I KLKS++S+  S CS LK F
Sbjct: 1079 KLCLAGNEFYELPTIECPLALDS-LCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSF 1137

Query: 371  PEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSL 415
            PEI           ++ + IE +PSS+        L +  C  L SLP S+C   SL  L
Sbjct: 1138 PEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVL 1197

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
             +  C KL +LP+ LG+L +LEEL    +                          S+  +
Sbjct: 1198 VVDCCPKLYKLPENLGSLRSLEELYATHS-------------------------YSIGCQ 1232

Query: 476  LYVSKSLTSLEIIDCKNF----MRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSL 529
            L     L SL I+D +N       +P++I  L  LK+L +    + E  +P  +  LSSL
Sbjct: 1233 LPSLSGLCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSL 1292

Query: 530  EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDR 587
            + L+L  N+   IP+ +++L++L  L LS+  NL RIPE     SSL+ LD+    +L+ 
Sbjct: 1293 QALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEF---SSSLQVLDVHSCTSLET 1349

Query: 588  IPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY 647
            +        + +   F SL   ++L N + ++P+          +   +NG      S+ 
Sbjct: 1350 LSSPSNLLQSCLLKCFKSLIQDLELENDIPIEPH----------VAPYLNGGI----SIA 1395

Query: 648  FP-GNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAF 684
             P  + IP+W R+Q  GS ++ K P+    N   +GFA 
Sbjct: 1396 IPRSSGIPEWIRYQKEGSKVAKKLPRNWYKNDDFLGFAL 1434



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 140/323 (43%), Gaps = 39/323 (12%)

Query: 7   EIQINPYTFSKMTELRLL-KFCGSKNKCMV-HSLEG---------------VPFTELRYF 49
           +IQ     F  M  LRLL     +K   MV H + G               +P  EL + 
Sbjct: 533 QIQFTTEAFKMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFL 592

Query: 50  EWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
            W  + L++L +    +NLV L +  S + QL +       LK I+L +S  L K+PD++
Sbjct: 593 HWDGYSLESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDIT 652

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLP-TSIHSKYLKRLVLRG 167
              NLEIL L  C++L    S I  L  L  L    C  L S P      K L+ L L  
Sbjct: 653 SVPNLEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSE 712

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEEL---PSSIKCLSNIGELLIYSCKRLENISSSI 224
            ++LK LP  ++ HL+    L   G   L   P SI  + ++  L    C +L+ +   +
Sbjct: 713 -TDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDL 771

Query: 225 FKLQFLESIRIH--RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
             L  LES+ ++  RC      E+P C + G      P+    + K PR  SL    C  
Sbjct: 772 ESLPCLESLSLNFLRC------ELP-CXVRGNHFSTIPAG---ISKLPRLRSLNLSHC-- 819

Query: 283 KSLTSLEIIDCPNFERLPDELGN 305
           K L  L+I + P+  R  D  G+
Sbjct: 820 KKL--LQIPELPSSLRALDTHGS 840



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 17/266 (6%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C + ESLPS  C  KSL SL    C   +  P+ + N++ L +L ++ TAI ELP  
Sbjct: 1104 LRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSS 1163

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            +  L  L  L +++C  L  +  SI  L S++ + +  C  L   PE         G  R
Sbjct: 1164 IDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVDCCPKLYKLPE-------NLGSLR 1216

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK----LERLPDELGNLEALEELRV 441
                +   +  S    LPS       L SL I+D +        +P+++  L +L+ L +
Sbjct: 1217 SLEELYATHSYSIGCQLPS----LSGLCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNL 1272

Query: 442  EGTGIRE--VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
                + E  +P+ +  L+  +  L   + F S+P  +    +L  L++  C+N +R+P+ 
Sbjct: 1273 SNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEF 1332

Query: 500  IGNLEYLKVLTIKGTAIREVPESLGQ 525
              +L+ L V +         P +L Q
Sbjct: 1333 SSSLQVLDVHSCTSLETLSSPSNLLQ 1358



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 48/322 (14%)

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            T C L+  L L G    ELP+ I+C   +  L + +C++LE++ S I KL+ L+S+    
Sbjct: 1074 TECELK--LCLAGNEFYELPT-IECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSG 1130

Query: 238  CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            C  L+       N++  R       +L L +    E LPS     + L  L +  C N  
Sbjct: 1131 CSELKSFPEIVENMENLR-------KLYLNQTA-IEELPSSIDHLQGLQCLSVESCDNLV 1182

Query: 298  RLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
             LP+ + NL +L  L++D    + +LPE LG L  L +L   +   +     S+  L S+
Sbjct: 1183 SLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCSL 1242

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
              ++I N SNL                                 ++P+ +C   SL  L 
Sbjct: 1243 RILDIQN-SNLSQ------------------------------RAIPNDICCLYSLKLLN 1271

Query: 417  IIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
            + +   +E  +P E+ NL +L+ L + G     +P  +++L AL  L L  C +   +P 
Sbjct: 1272 LSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPE 1331

Query: 475  RLYVSKSLTSLEIIDCKNFMRL 496
                S SL  L++  C +   L
Sbjct: 1332 ---FSSSLQVLDVHSCTSLETL 1350



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 28/170 (16%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIE 384
           L  L L+ C+ L  + S I+KLK + ++    C  L+ FPEI           +  + ++
Sbjct: 657 LEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLK 716

Query: 385 RIPSSVLK---------LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            +PSS  K         L  C  L  +P S+C  +SL +L    C KL++LP++L +L  
Sbjct: 717 ELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPC 776

Query: 436 LEEL-----------RVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
           LE L            V G     +P  +++L  L  L L  C     +P
Sbjct: 777 LESLSLNFLRCELPCXVRGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIP 826



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 62/353 (17%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLN------KCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           E+ F + DG  +E +PS+    N      +CS ++ L     +F  L  + +     L +
Sbjct: 588 ELTFLHWDGYSLESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIK 647

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           +PD                 I  VP       L  L L+ C++  SLPS +Y  K L +L
Sbjct: 648 IPD-----------------ITSVPN------LEILILEGCTNLMSLPSDIYKLKGLRTL 684

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP-ESLGQLSSLEWLVLSD-NNLQIIP 543
              +C      P+    ++ L+ L +  T ++E+P  S   L  L  L L+   NL  +P
Sbjct: 685 CCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVP 744

Query: 544 ESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDR--IPEYLR-SFPTSI 599
           +S+  + SL +L  S    L+++PE L+ L  L+ L L   N  R  +P  +R +  ++I
Sbjct: 745 KSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSL---NFLRCELPCXVRGNHFSTI 801

Query: 600 PSEFTSL-RL-SVDLRNCLKL-----DPNELSEIIKDG---------W-----MKQSVN- 637
           P+  + L RL S++L +C KL      P+ L  +   G         W      K ++  
Sbjct: 802 PAGISKLPRLRSLNLSHCKKLLQIPELPSSLRALDTHGSPVTLSSGPWSLLKCFKSAIQE 861

Query: 638 GETYITKSMYFPGNE-IPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
            +   TK ++ PG+  IPKW      GS      PQ   Y   M   F +  A
Sbjct: 862 TDCNFTKVVFIPGDSGIPKWINGFQKGSYAERMLPQ-NWYQDNMFLGFSIGCA 913



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 55/294 (18%)

Query: 103  KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
            +LP +     L+ L L  C  L    S I  L  L+ L    C  L S P  +       
Sbjct: 1089 ELPTIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIV------- 1141

Query: 163  LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
                   N++NL K+   +L  T       IEELPSSI  L  +  L + SC  L ++  
Sbjct: 1142 ------ENMENLRKL---YLNQT------AIEELPSSIDHLQGLQCLSVESCDNLVSLPE 1186

Query: 223  SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            SI  L  L+ + +  CP L   ++P  N+   RS E+  +        +  SL SG C  
Sbjct: 1187 SICNLTSLKVLVVDCCPKL--YKLPE-NLGSLRSLEELYATHSYSIGCQLPSL-SGLCSL 1242

Query: 283  K-------------------SLTSLEIIDCPNFE----RLPDELGNLQALNRLIIDGTAI 319
            +                    L SL++++  NF      +P E+ NL +L  L++ G   
Sbjct: 1243 RILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHF 1302

Query: 320  RELPEGLGQLALLSKLELKNCSEL----EYISS-SIFKLKSVESIE-ISNCSNL 367
              +P+G+ +L  L  L+L +C  L    E+ SS  +  + S  S+E +S+ SNL
Sbjct: 1303 SSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNL 1356


>gi|108740427|gb|ABG01569.1| disease resistance protein [Arabidopsis thaliana]
          Length = 405

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAFNLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ E+ +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLREVDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS       L  L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAIXLQXLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE + ++I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPTNI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 165/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAFNLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  +DL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLREVDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI     +  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAIXLQXLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP+     +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPTN-INLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 168/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  +++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAFNLQ---KLLLRYCSNLVELPSSIGNAINLREVDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSEL------------------------ 343
            LI+D      + ELP  +G    L KL+L+ C++L                        
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAIXLQXLLLDDCSSL 190

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             + SSI    ++  + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
           +++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 TNINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  +++  C  L RLP  +GN   L  
Sbjct: 79  DAFNLQK-----LLLRYCSNLVELPSSIGNAINLREVDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAIXLQXLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPTNIN-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 190/399 (47%), Gaps = 68/399 (17%)

Query: 311  RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
            +L + G    ELP     LAL S L L+NC +LE + S I KLKS++S+  S CS LK F
Sbjct: 1137 KLCLAGNEFYELPTIECPLALDS-LCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSF 1195

Query: 371  PEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSL 415
            PEI           ++ + IE +PSS+        L +  C  L SLP S+C   SL  L
Sbjct: 1196 PEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVL 1255

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
             +  C KL +LP+ LG+L +LEEL    +                          S+  +
Sbjct: 1256 VVDCCPKLYKLPENLGSLRSLEELYATHS-------------------------YSIGCQ 1290

Query: 476  LYVSKSLTSLEIIDCKNF----MRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSL 529
            L     L SL I+D +N       +P++I  L  LK+L +    + E  +P  +  LSSL
Sbjct: 1291 LPSLSGLCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSL 1350

Query: 530  EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE-NNLDR 587
            + L+L  N+   IP+ +++L++L  L LS+  NL RIPE     SSL+ LD+    +L+ 
Sbjct: 1351 QALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEF---SSSLQVLDVHSCTSLET 1407

Query: 588  IPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY 647
            +        + +   F SL   ++L N + ++P+          +   +NG      S+ 
Sbjct: 1408 LSSPSNLLQSCLLKCFKSLIQDLELENDIPIEPH----------VAPYLNGGI----SIA 1453

Query: 648  FP-GNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAF 684
             P  + IP+W R+Q  GS ++ K P+    N   +GFA 
Sbjct: 1454 IPRSSGIPEWIRYQKEGSKVAKKLPRNWYKNDDFLGFAL 1492



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 17/266 (6%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C + ESLPS  C  KSL SL    C   +  P+ + N++ L +L ++ TAI ELP  
Sbjct: 1162 LRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSS 1221

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            +  L  L  L +++C  L  +  SI  L S++ + +  C  L   PE         G  R
Sbjct: 1222 IDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVDCCPKLYKLPE-------NLGSLR 1274

Query: 386  IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK----LERLPDELGNLEALEELRV 441
                +   +  S    LPS       L SL I+D +        +P+++  L +L+ L +
Sbjct: 1275 SLEELYATHSYSIGCQLPS----LSGLCSLRILDIQNSNLSQRAIPNDICCLYSLKLLNL 1330

Query: 442  EGTGIRE--VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
                + E  +P+ +  L+  +  L   + F S+P  +    +L  L++  C+N +R+P+ 
Sbjct: 1331 SNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEF 1390

Query: 500  IGNLEYLKVLTIKGTAIREVPESLGQ 525
              +L+ L V +         P +L Q
Sbjct: 1391 SSSLQVLDVHSCTSLETLSSPSNLLQ 1416



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 172/392 (43%), Gaps = 61/392 (15%)

Query: 7   EIQINPYTFSKMTELRLL-KFCGSKNKCMV-HSLEG---------------VPFTELRYF 49
           +IQ     F  M  LRLL     +K   MV H + G               +P  EL + 
Sbjct: 533 QIQFTTEAFKMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFL 592

Query: 50  EWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
            W  + L++L +    +NLV L +  S + QL +       LK I+L +S  L K+PD++
Sbjct: 593 HWDGYSLESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDIT 652

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRG 167
              NLEI                        L L+ C +L SLP+ I+  K L+ L  R 
Sbjct: 653 SVPNLEI------------------------LILEGCTNLMSLPSDIYKLKGLRTLCCRE 688

Query: 168 CSNLKNLPKMTS--CHLRSTLPLLGVGIEELP-SSIKCLSNIGELLIYSCKRLENISSSI 224
           C  L++ P++     +LR  L L    ++ELP SS K L  + +L +  C+ L ++  SI
Sbjct: 689 CLKLRSFPEIKERMKNLRE-LYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSI 747

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
             ++ L+++    CP L   ++P  +++     E  S  L   +C  P    SG    K 
Sbjct: 748 CAMRSLKALSFSYCPKLD--KLPE-DLESLPCLESLS--LNFLRCELP--CLSGLSSLKE 800

Query: 285 LTSLEIIDCPNF--ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           L+    +D  N   E +P++ G     +  +      R +   +  L+ L +L+L+  + 
Sbjct: 801 LS----LDQSNITGEVIPNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELKLRG-NH 855

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
              I + I KL  + S+ +S+C  L   PE+P
Sbjct: 856 FSTIPAGISKLPRLRSLNLSHCKKLLQIPELP 887



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 147/376 (39%), Gaps = 79/376 (21%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIE 384
           L  L L+ C+ L  + S I+KLK + ++    C  L+ FPEI           +  + ++
Sbjct: 657 LEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLK 716

Query: 385 RIPSSVLK---------LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
            +PSS  K         L  C  L  +P S+C  +SL +L    C KL++LP++L +L  
Sbjct: 717 ELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPC 776

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           LE L                L   + +L   S   SL   L + +S  + E+I       
Sbjct: 777 LESL---------------SLNFLRCELPCLSGLSSL-KELSLDQSNITGEVI------- 813

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
            P++ G      +        R +  ++  LSSLE L L  N+   IP  +++L  L SL
Sbjct: 814 -PNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELKLRGNHFSTIPAGISKLPRLRSL 872

Query: 556 KLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRN 614
            LS+   L +IPE     SSL+ LD   +     P  L S P S+   F S     D   
Sbjct: 873 NLSHCKKLLQIPEL---PSSLRALDTHGS-----PVTLSSGPWSLLKCFKSAIQETDCN- 923

Query: 615 CLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE-IPKWFRHQSTGSTISLKTPQP 673
                                       TK ++ PG+  IPKW      GS      PQ 
Sbjct: 924 ---------------------------FTKVVFIPGDSGIPKWINGFQKGSYAERMLPQ- 955

Query: 674 TGYNKLMGFAFCVVVA 689
             Y   M   F +  A
Sbjct: 956 NWYQDNMFLGFSIGCA 971



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 48/322 (14%)

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
            T C L+  L L G    ELP+ I+C   +  L + +C++LE++ S I KL+ L+S+    
Sbjct: 1132 TECELK--LCLAGNEFYELPT-IECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSG 1188

Query: 238  CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
            C  L+       N++  R       +L L +    E LPS     + L  L +  C N  
Sbjct: 1189 CSELKSFPEIVENMENLR-------KLYLNQTA-IEELPSSIDHLQGLQCLSVESCDNLV 1240

Query: 298  RLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
             LP+ + NL +L  L++D    + +LPE LG L  L +L   +   +     S+  L S+
Sbjct: 1241 SLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCSL 1300

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
              ++I N SNL                                 ++P+ +C   SL  L 
Sbjct: 1301 RILDIQN-SNLSQ------------------------------RAIPNDICCLYSLKLLN 1329

Query: 417  IIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
            + +   +E  +P E+ NL +L+ L + G     +P  +++L AL  L L  C +   +P 
Sbjct: 1330 LSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPE 1389

Query: 475  RLYVSKSLTSLEIIDCKNFMRL 496
                S SL  L++  C +   L
Sbjct: 1390 ---FSSSLQVLDVHSCTSLETL 1408



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 55/294 (18%)

Query: 103  KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
            +LP +     L+ L L  C  L    S I  L  L+ L    C  L S P  +       
Sbjct: 1147 ELPTIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIV------- 1199

Query: 163  LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
                   N++NL K+   +L  T       IEELPSSI  L  +  L + SC  L ++  
Sbjct: 1200 ------ENMENLRKL---YLNQT------AIEELPSSIDHLQGLQCLSVESCDNLVSLPE 1244

Query: 223  SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            SI  L  L+ + +  CP L   ++P  N+   RS E+  +        +  SL SG C  
Sbjct: 1245 SICNLTSLKVLVVDCCPKL--YKLPE-NLGSLRSLEELYATHSYSIGCQLPSL-SGLCSL 1300

Query: 283  K-------------------SLTSLEIIDCPNFE----RLPDELGNLQALNRLIIDGTAI 319
            +                    L SL++++  NF      +P E+ NL +L  L++ G   
Sbjct: 1301 RILDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHF 1360

Query: 320  RELPEGLGQLALLSKLELKNCSEL----EYISS-SIFKLKSVESIE-ISNCSNL 367
              +P+G+ +L  L  L+L +C  L    E+ SS  +  + S  S+E +S+ SNL
Sbjct: 1361 SSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNL 1414


>gi|145326642|ref|NP_001077768.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145337141|ref|NP_176562.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196019|gb|AEE34140.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196020|gb|AEE34141.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 19/296 (6%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLN-I 61
           SE+ I    F ++ +LR L    S++     VH  E V F   LR   W  +P K+L   
Sbjct: 377 SEVTICDGAFKRLHDLRFLHVYKSRDDGNNRVHIPEKVEFPPRLRLLHWAAYPSKSLPPT 436

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E LV L M  S V +LW+  Q+L +LK +DL  SK L +LPDLS A NLE   L  C
Sbjct: 437 FNLECLVELNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELPDLSNATNLEYFYLDNC 496

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL E  SS  +L+KLE L+++ C +L  +P  ++   +K++ ++GCS L+  P + S H
Sbjct: 497 ESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLTSVKQVNMKGCSRLRKFP-VISRH 555

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           + +        +E++P+SI    ++  L +   ++L+ ++      Q   S+R       
Sbjct: 556 IEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLT------QLPTSLRHLNLSYT 609

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
               +P C I      E    EL L  C R  SLP   C   S+ +LE  DC + E
Sbjct: 610 DIESIPDC-IKALHQLE----ELCLSGCTRLASLPDLPC---SIKALEAEDCESLE 657



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 36/308 (11%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S +E L       K+L  +++ + K L+ LPD L N   LE   ++    + E+P S A 
Sbjct: 450 SLVEKLWEGTQHLKNLKYMDLTESKNLKELPD-LSNATNLEYFYLDNCESLVEIPSSFAH 508

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ S+  + +  C    + P    ++E L +     T
Sbjct: 509 LHKLEWLEMNNCINLQVIPAHMNLT-SVKQVNMKGCSRLRKFPVISRHIEALDI--SDNT 565

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQL-SSLVSLKLSNNNLERIPERLDPL 572
            + ++P S+     L +L +S N  LQ     L QL +SL  L LS  ++E IP+ +  L
Sbjct: 566 ELEDMPASIASWCHLVYLDMSHNEKLQ----GLTQLPTSLRHLNLSYTDIESIPDCIKAL 621

Query: 573 SSLKYLDLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLDPN 621
             L+ L L       +L  +P  +++          S+ S   +    +   NC KL   
Sbjct: 622 HQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPLYTPSARLSFTNCFKLGGE 681

Query: 622 ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
               II+           +  T S+  PG E+P  F H++ G+++S+    P G N    
Sbjct: 682 AREAIIRRS---------SDSTGSVLLPGREVPAEFDHRAQGNSLSILL--PLGGNS--Q 728

Query: 682 FAFCVVVA 689
           F  CVV++
Sbjct: 729 FMVCVVIS 736



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 25/200 (12%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  + +   ++ELP+ L     L    L NC  L  I SS   L  +E +E++
Sbjct: 462 LKNLKYMD--LTESKNLKELPD-LSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMN 518

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC NL+  P     +++ + ++++      +  CS+L   P    + + + +L+I D  +
Sbjct: 519 NCINLQVIP----AHMNLTSVKQV-----NMKGCSRLRKFP---VISRHIEALDISDNTE 566

Query: 423 LERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           LE +P  + +   L  L +       G+ ++P SL  L LS       +  ES+P  +  
Sbjct: 567 LEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLRHLNLSY------TDIESIPDCIKA 620

Query: 479 SKSLTSLEIIDCKNFMRLPD 498
              L  L +  C     LPD
Sbjct: 621 LHQLEELCLSGCTRLASLPD 640


>gi|227438293|gb|ACP30636.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1770

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 150/306 (49%), Gaps = 25/306 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           MS I  ++ I+   F  M  LR L+   ++      VH  E + F   L+   W  +P K
Sbjct: 536 MSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRK 595

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L      E+LV L +  +++ QLW+  Q L SLK++ L     L +LPDL+ A NLEIL
Sbjct: 596 CLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEIL 655

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           D+  C SL E HSS+  L++L+ LD+  CK L  +PT  +   L+ LV+ G   ++ LP 
Sbjct: 656 DVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPD 715

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS--SIFKLQFLESIR 234
           +++     ++P     +EE   S +  S++  L I+ C       +  S   L  + S+ 
Sbjct: 716 ISTTIRELSIP--ETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVT 773

Query: 235 -IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            I R P+        C + G +       EL +  CP+  SLP    + +SLT+L +  C
Sbjct: 774 GIERIPDC-----IKC-LHGLK-------ELSIYGCPKLASLPE---LPRSLTTLTVYKC 817

Query: 294 PNFERL 299
           P+ E L
Sbjct: 818 PSLETL 823



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 2    SKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTEL-RYFEWHQFPLKT 58
            S I + + I+   F  M +LR L    ++      +H  E + F  L R   W  +P K 
Sbjct: 1436 STIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEVYPGKC 1495

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L + L  E+LV L    SK+ QLW  +Q L +LK++DL  S  L ++PDLS A +L+ L+
Sbjct: 1496 LPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLN 1555

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  C SL E  SSI  L+KLE L+++ C SL   P+ ++   L+ L + GC  L+ +P +
Sbjct: 1556 LTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYV 1615

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCL 203
            ++     +L +    +EE P S+ CL
Sbjct: 1616 ST----KSLVIGDTMLEEFPESL-CL 1636



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 56/236 (23%)

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           PE L +L L         ++LE +      L S++ + + +C  LK  P++     + + 
Sbjct: 603 PEHLVELHLTD-------TQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLA----NATN 651

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           +E     +L +  C  L  + SS+     L SL++I CKKL+ +P  L NL +LE L + 
Sbjct: 652 LE-----ILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVP-TLFNLTSLESLVIM 705

Query: 443 G-----------TGIRE--VPKSLAQLALSK---------LKLKKCS---SFESLPSR-- 475
           G           T IRE  +P+++ +  L           L++  C+    F + PS+  
Sbjct: 706 GSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRN 765

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG----TAIREVPESLGQLS 527
           L V +S+T +E        R+PD I  L  LK L+I G     ++ E+P SL  L+
Sbjct: 766 LMVMRSVTGIE--------RIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLT 813



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSEL 343
           L SL++I C   + +P  L NL +L  L+I G+  +RELP+    +  LS  E    + L
Sbjct: 676 LQSLDMIFCKKLQVVP-TLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPE----TML 730

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIP-----FCNIDGSGIERIPSSV-------- 390
           E    S      ++ +EI  C+    F   P           +GIERIP  +        
Sbjct: 731 EEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKE 790

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L +  C KL SLP    + +SLT+L +  C  LE L
Sbjct: 791 LSIYGCPKLASLPE---LPRSLTTLTVYKCPSLETL 823



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 25/282 (8%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           ++LE L        SL  + ++ C  L+ LPD L N   LE L V G   + E+  S+  
Sbjct: 614 TQLEQLWEGTQPLTSLKKMVLVSCLCLKELPD-LANATNLEILDVCGCQSLVEIHSSVGN 672

Query: 456 LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L +  C   + +P+ L+   SL SL I+       LPD    +   + L+I  T
Sbjct: 673 LHRLQSLDMIFCKKLQVVPT-LFNLTSLESLVIMGSYQMRELPDISTTI---RELSIPET 728

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            + E  ES    S L+ L +    +     +     +L+ ++ S   +ERIP+ +  L  
Sbjct: 729 MLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMR-SVTGIERIPDCIKCLHG 787

Query: 575 LKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD---- 629
           LK L ++    L  +PE  RS  T    +  SL           L+P      I+D    
Sbjct: 788 LKELSIYGCPKLASLPELPRSLTTLTVYKCPSLE---------TLEPFPFGSRIEDLSFL 838

Query: 630 GWMKQSVNGETYITKS---MYFPGNEIPKWFRHQSTGSTISL 668
              +        IT+    +  PG  +P  F H++ G+ +++
Sbjct: 839 DCFRLGRKARRLITQQSSRVCLPGRNVPAEFHHRAIGNFVAI 880



 Score = 39.7 bits (91), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 422  KLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            KLE+L   +  L  L+++ + G+  ++EVP       L +L L  C S   +PS +    
Sbjct: 1514 KLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVEIPSSIGDLH 1573

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSDNNL 539
             L  LEI  C +    P  + NL  L+ L + G   +R++P       S + LV+ D  L
Sbjct: 1574 KLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLRKIP-----YVSTKSLVIGDTML 1627

Query: 540  QIIPESL 546
            +  PESL
Sbjct: 1628 EEFPESL 1634


>gi|110741602|dbj|BAE98749.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 19/296 (6%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLN-I 61
           SE+ I    F ++ +LR L    S++     VH  E V F   LR   W  +P K+L   
Sbjct: 377 SEVTICDGAFKRLHDLRFLHVYKSRDDGNNRVHIPEKVEFPPRLRLLHWAAYPSKSLPPT 436

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E LV L M  S V +LW+  Q+L +LK +DL  SK L +LPDLS A NLE   L  C
Sbjct: 437 FNLECLVELNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELPDLSNATNLEYFYLDNC 496

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL E  SS  +L+KLE L+++ C +L  +P  ++   +K++ ++GCS L+  P + S H
Sbjct: 497 ESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLTSVKQVNMKGCSRLRKFP-VISRH 555

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           + +        +E++P+SI    ++  L +   ++L+ ++      Q   S+R       
Sbjct: 556 IEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLT------QLPTSLRHLNLSYT 609

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
               +P C I      E    EL L  C R  SLP   C   S+ +LE  DC + E
Sbjct: 610 DIESIPDC-IKALHQLE----ELCLSGCTRLASLPDLPC---SIKALEAEDCESLE 657



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 36/308 (11%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S +E L       K+L  +++ + K L+ LPD L N   LE   ++    + E+P S A 
Sbjct: 450 SLVEKLWEGTQHLKNLKYMDLTESKNLKELPD-LSNATNLEYFYLDNCESLVEIPSSFAH 508

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ S+  + +  C    + P    ++E L +     T
Sbjct: 509 LHKLEWLEMNNCINLQVIPAHMNLT-SVKQVNMKGCSRLRKFPVISRHIEALDI--SDNT 565

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQL-SSLVSLKLSNNNLERIPERLDPL 572
            + ++P S+     L +L +S N  LQ     L QL +SL  L LS  ++E IP+ +  L
Sbjct: 566 ELEDMPASIASWCHLVYLDMSHNEKLQ----GLTQLPTSLRHLNLSYTDIESIPDCIKAL 621

Query: 573 SSLKYLDLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLDPN 621
             L+ L L       +L  +P  +++          S+ S   +    +   NC KL   
Sbjct: 622 HQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPLYTPSARLSFTNCFKLGGE 681

Query: 622 ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
               II+           +  T S+  PG E+P  F H++ G+++S+    P G N    
Sbjct: 682 AREAIIRRS---------SDSTGSVLLPGREVPAEFDHRAQGNSLSILL--PLGGNS--Q 728

Query: 682 FAFCVVVA 689
           F  CVV++
Sbjct: 729 FMVCVVIS 736



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 25/201 (12%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            L NL+ ++  + +   ++ELP+ L     L    L NC  L  I SS   L  +E +E+
Sbjct: 461 HLKNLKYMD--LTESKNLKELPD-LSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEM 517

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
           +NC NL+  P     +++ + ++++      +  CS+L   P    + + + +L+I D  
Sbjct: 518 NNCINLQVIP----AHMNLTSVKQV-----NMKGCSRLRKFP---VISRHIEALDISDNT 565

Query: 422 KLERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
           +LE +P  + +   L  L +       G+ ++P SL  L LS       +  ES+P  + 
Sbjct: 566 ELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLRHLNLSY------TDIESIPDCIK 619

Query: 478 VSKSLTSLEIIDCKNFMRLPD 498
               L  L +  C     LPD
Sbjct: 620 ALHQLEELCLSGCTRLASLPD 640


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 173/360 (48%), Gaps = 35/360 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L  L +    +  LP+ +G L  L  L L N ++   +   I+ L+ ++ 
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNL-NSNQFTTLPKEIWNLQKLQK 185

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPS 404
           + +   + L   PE       +   ++DG+    +P  + KL K  +L        +LP 
Sbjct: 186 LSLGR-NQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPK 244

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
            +   ++L  L + D  +   LP E+GNL+ L++L +    +  +PK + +L +L +L L
Sbjct: 245 EIKKLQNLQWLNL-DSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTL 303

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +   +LP  +   +SL  L I+       +P EIG L+ L+ LT+ G  +  +P+ +
Sbjct: 304 W-GNQLTTLPKEIGKLQSLQEL-ILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEI 361

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           G+L SL+ L+L  N L  IP+ + QL  L  L LS N L  IP+ ++ L +L+ L L  N
Sbjct: 362 GKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNN 421

Query: 584 NLDRIPEYLRSFP------------TSIPSEFTSLRLSVDL---RNCLKLDPNELSEIIK 628
            L  +P+ + +              T++P E   L+   DL    N L   P E+ ++ K
Sbjct: 422 QLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQK 481



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 70/437 (16%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS------- 248
           LP  I  L N+ +L + S  +   +   I+ LQ L+ + + R    Q   +P        
Sbjct: 150 LPKEIGNLQNLQDLNLNS-NQFTTLPKEIWNLQKLQKLSLGRN---QLTTLPEEIGKLQK 205

Query: 249 ---CNIDGTRSKEQPSSELKLKKCP-------RPESLPSGQCMFKSLTSLEIIDCPNFER 298
               ++DG +    P    KL+K         R  +LP      ++L  L + D   F  
Sbjct: 206 LKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNL-DSNRFTT 264

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+GNLQ L +L +    +  LP+ +G+L  L +L L   ++L  +   I KL+S++ 
Sbjct: 265 LPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLW-GNQLTTLPKEIGKLQSLQE 323

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + +                                   ++L ++P  +   +SL SL + 
Sbjct: 324 LILGK---------------------------------NQLTTIPKEIGKLQSLQSLTLW 350

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
              +L  LP E+G L++L+EL +    +  +PK + QL  L +L L    SF  L +   
Sbjct: 351 -GNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSL----SFNQLTAIPK 405

Query: 478 VSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
             + L +L+ +  +N     LP EIGNL+ L+ L +    +  +PE +G+L +L+ L L+
Sbjct: 406 EIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLN 465

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           +N L  +P+ + +L  L  L L+NN L  +P+ ++ L  LK L L +N       +LRS 
Sbjct: 466 NNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADN------PFLRSQ 519

Query: 596 PTSIPSEFTSLRLSVDL 612
              I     ++R++ DL
Sbjct: 520 KEKIQKLLPNVRITFDL 536



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 45/300 (15%)

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           +L+N  +L+  S+ +  L      EI N  NL+        N++ +    +P  +  L K
Sbjct: 133 KLQNLRDLDLSSNQLTTLPK----EIGNLQNLQDL------NLNSNQFTTLPKEIWNLQK 182

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
             KL                  +   +L  LP+E+G L+ L+EL ++G     +PK + +
Sbjct: 183 LQKLS-----------------LGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGK 225

Query: 456 LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L +L L   + F +LP  +   ++L  L + D   F  LP EIGNL+ L+ L++   
Sbjct: 226 LQKLKELHLG-SNRFTTLPKEIKKLQNLQWLNL-DSNRFTTLPKEIGNLQKLQKLSLAHN 283

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            +  +P+ +G+L SL+ L L  N L  +P+ + +L SL  L L  N L  IP+ +  L S
Sbjct: 284 QLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQS 343

Query: 575 LKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
           L+ L L+ N L           T++P E   L+   +L     L  N+L+ I K+ W  Q
Sbjct: 344 LQSLTLWGNQL-----------TTLPKEIGKLQSLQELI----LGKNQLTTIPKEIWQLQ 388


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 218/460 (47%), Gaps = 30/460 (6%)

Query: 135 NKLEVLDLDRCKS-LTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV 191
           N ++V +LD   + LT  P  I + + LK L L   + LK LPK + +      L L   
Sbjct: 36  NPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSL-ANNQLKTLPKEIETLQKLKWLYLSEN 94

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            ++ LP  I  L N+  L +Y   +L  + S I KL+ L+  R+H   N Q + +P    
Sbjct: 95  QLKTLPKEIGTLQNLEVLDLYK-NQLRTLPSEIGKLRSLK--RLHLEHN-QLITLPQE-- 148

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
            GT    Q   EL L    +   LP      + L  L + +      LP E+G LQ L  
Sbjct: 149 IGTL---QDLEELNLANN-QLRILPKEIGTLQHLQDLNVFNN-QLITLPQEIGTLQNLQS 203

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L ++   +  LP+ +G L  L  L L N ++L  +   I KL+ +E + ++N + LK  P
Sbjct: 204 LNLENNRLVTLPKEIGALQKLEWLYLTN-NQLATLPKEIGKLQKLEWLGLTN-NQLKSLP 261

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           +      +   ++ +   +L+ N+   LES P  +    +L  L + +  +   LP E+G
Sbjct: 262 Q------EIGKLQNLKELILENNR---LESFPKEIGTLPNLQRLHL-EYNRFTTLPQEIG 311

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            L  L  L +E   +  +P+ + +L  L  L L   +   +LP  +   + L  L + + 
Sbjct: 312 TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN-NRLATLPKEIGTLQKLQHLYLANN 370

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
           +    LP EIG L+ LK L ++   +  +PE++G L  LEWL L +N L  +PE +  L 
Sbjct: 371 Q-LATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQ 429

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            +V L L+NN L  +P+ +  L SLK LDL  N     P+
Sbjct: 430 KIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPK 469



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 147/299 (49%), Gaps = 38/299 (12%)

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSL 412
           EI    NLK      + ++  + ++ +P  +  L K        ++L++LP  +    +L
Sbjct: 56  EIGTLQNLK------YLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIG---TL 106

Query: 413 TSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
            +LE++D  K  L  LP E+G L +L+ L +E   +  +P+ +  L  L +L L   +  
Sbjct: 107 QNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLAN-NQL 165

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
             LP  +   + L  L + + +  + LP EIG L+ L+ L ++   +  +P+ +G L  L
Sbjct: 166 RILPKEIGTLQHLQDLNVFNNQ-LITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKL 224

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           EWL L++N L  +P+ + +L  L  L L+NN L+ +P+ +  L +LK L L  N L+  P
Sbjct: 225 EWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFP 284

Query: 590 EYLRSFP------------TSIPSEFTSLR----LSVDLRNCLKLDPNELSEIIKDGWM 632
           + + + P            T++P E  +L     L+++  N L   P E+  + +  W+
Sbjct: 285 KEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLE-HNQLTTLPQEIGRLERLEWL 342



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 218/500 (43%), Gaps = 81/500 (16%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L  +++ L  LK + L  ++L T   ++   QNLE+LDL Y + L
Sbjct: 61  QNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDL-YKNQL 119

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
               S I  L  L+ L L+  + L +LP  I +            +L+ L  + +  LR 
Sbjct: 120 RTLPSEIGKLRSLKRLHLEHNQ-LITLPQEIGT----------LQDLEEL-NLANNQLRI 167

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                      LP  I  L ++ +L +++  +L  +   I  LQ L+S+           
Sbjct: 168 -----------LPKEIGTLQHLQDLNVFN-NQLITLPQEIGTLQNLQSL----------- 204

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDE 302
                N++  R    P                       +L  LE +   N     LP E
Sbjct: 205 -----NLENNRLVTLPKE-------------------IGALQKLEWLYLTNNQLATLPKE 240

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G LQ L  L +    ++ LP+ +G+L  L +L L+N + LE     I  L +++ + + 
Sbjct: 241 IGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILEN-NRLESFPKEIGTLPNLQRLHLE 299

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
             +     P+      +   + R+P   L+ N+ +   +LP  +   + L  L + +  +
Sbjct: 300 -YNRFTTLPQ------EIGTLHRLPWLNLEHNQLT---TLPQEIGRLERLEWLNLYN-NR 348

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           L  LP E+G L+ L+ L +    +  +PK + QL  L  L L+  +   +LP  +    +
Sbjct: 349 LATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLE-YNQLATLPEAI---GT 404

Query: 482 LTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL 539
           L  LE +  KN     LP+EIG L+ +  L +    +R +P+ +GQL SL+ L LS N  
Sbjct: 405 LQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPF 464

Query: 540 QIIPESLNQLSSLVSLKLSN 559
              P+ +  L  L  LKL N
Sbjct: 465 TTFPKEIVGLKHLQMLKLKN 484



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 221/504 (43%), Gaps = 63/504 (12%)

Query: 4   INSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NI 61
           +N+++ I P     +  L+ L    ++ K +   +E +   +L++    +  LKTL   I
Sbjct: 46  VNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETL--QKLKWLYLSENQLKTLPKEI 103

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG-- 119
              +NL  L +  +++  L  ++  L SLKR+ L++++L+T   ++   Q+LE L+L   
Sbjct: 104 GTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANN 163

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
               L +   ++Q+L  L V +      L +LP  I +             L+NL     
Sbjct: 164 QLRILPKEIGTLQHLQDLNVFN----NQLITLPQEIGT-------------LQNL----- 201

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                +L L    +  LP  I  L  + E L  +  +L  +   I KLQ LE + +    
Sbjct: 202 ----QSLNLENNRLVTLPKEIGALQKL-EWLYLTNNQLATLPKEIGKLQKLEWLGL---T 253

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           N Q   +P         K Q   EL L+   R ES P       +L  L  ++   F  L
Sbjct: 254 NNQLKSLPQ-----EIGKLQNLKELILENN-RLESFPKEIGTLPNLQRLH-LEYNRFTTL 306

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G L  L  L ++   +  LP+ +G+L  L  L L N + L  +   I  L+ ++ +
Sbjct: 307 PQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN-NRLATLPKEIGTLQKLQHL 365

Query: 360 EISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN-------KCSKLESLPSS 405
            ++N + L   P+       +   +++ + +  +P ++  L        K ++L +LP  
Sbjct: 366 YLAN-NQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEE 424

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLK 464
           +   + +  L + +  +L  LP  +G L++L++L + G      PK +  L  L  LKLK
Sbjct: 425 IGTLQKIVKLNLAN-NQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQMLKLK 483

Query: 465 KCSSFESLPSRLYVSKSLTSLEII 488
              +   L  R  + K L  ++II
Sbjct: 484 NIPAL--LSERETIRKLLPDVKII 505



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
           R+  E+L     +  L L +N L I P  +  L +L  L L+NN L+ +P+ ++ L  LK
Sbjct: 28  RDFNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLK 87

Query: 577 YLDLFENNLDRIPEYLRSFPT------------SIPSEFTSLR 607
           +L L EN L  +P+ + +               ++PSE   LR
Sbjct: 88  WLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLR 130


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 178/421 (42%), Gaps = 65/421 (15%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           L DEL  L        DG  +  +P         S  + +N  +L    SSI +L +   
Sbjct: 562 LSDELRYLHG------DGYPLSYMP---------SNFQAENLVQLTLAYSSIKQLWTGVQ 606

Query: 359 IEISNCSNLKGFPEIPF----CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSL 406
           + +S CS++  FP + +      +DG+ IE IPSS+        L L  C +   LP ++
Sbjct: 607 LILSGCSSITEFPHVSWDIKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTI 666

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKK 465
             FK L  L +  C      P+ L  + +L+ L ++GTGI  +P  +  L  L  L+L+ 
Sbjct: 667 WKFKLLQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRS 726

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           C             K+L  L+ +     ++ P  +G ++YL+ L + G  + EVP  +  
Sbjct: 727 C-------------KNLYGLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLEVPYCIDC 773

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLKYLDLF 581
           L SLE L LS N  + IP S+N+L  L  L L +     +L  +P RL  L + K   L 
Sbjct: 774 LPSLESLDLSRNLFEEIPVSINKLFELQYLGLRDCKKLISLPDLPPRLTKLDAHKCCSLK 833

Query: 582 ENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY 641
             +LD         PT I              NC  LD +E  +II     K  V  E  
Sbjct: 834 SASLD---------PTGIEGN----NFEFFFTNCHSLDLDERRKIIAYALTKFQVYSERL 880

Query: 642 ITKSMYFPGNE----IPKWFRH-QSTGSTISLKTPQPTGYNKLMGFAFC--VVVACSVSE 694
             +  Y    E    IP W R     G++ +++ P     +  +GF     + V C + +
Sbjct: 881 HHQMSYLLAGESSLWIPSWVRRFHHKGASTTVQLPSNWADSDFLGFELVTSIAVDCRICK 940

Query: 695 C 695
           C
Sbjct: 941 C 941



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 124/287 (43%), Gaps = 35/287 (12%)

Query: 31  NKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNL 87
           N C V+  +G+ F   ELRY     +PL  + +    ENLV L +  S + QLW  VQ +
Sbjct: 549 NNCKVNLPQGLDFLSDELRYLHGDGYPLSYMPSNFQAENLVQLTLAYSSIKQLWTGVQLI 608

Query: 88  VSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKS 147
           +S           +T+ P +S       LD    +++ E  SSI+Y  +L  L L  CK 
Sbjct: 609 LS-------GCSSITEFPHVSWDIKKLFLD---GTAIEEIPSSIKYFPELVELSLQNCKR 658

Query: 148 LTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSN 205
              LP +I   K L++L L GCS   + P++         L L G GI  LPS ++ L  
Sbjct: 659 FLRLPRTIWKFKLLQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPG 718

Query: 206 IGELLIYSCKRL----ENISSSIFK-------LQFLESIRIHRCPNLQFLEMPSCNIDGT 254
           +  L + SCK L    E IS  + K       +Q+L  + +  C     LE+P C ID  
Sbjct: 719 LLSLELRSCKNLYGLQEVISGRVVKSPATVGGIQYLRKLNLSGCC---LLEVPYC-IDCL 774

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
            S E       L      E +P        L  L + DC     LPD
Sbjct: 775 PSLESLDLSRNLF-----EEIPVSINKLFELQYLGLRDCKKLISLPD 816



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 251 IDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
           +DGT  +E PSS        EL L+ C R   LP     FK L  L +  C  F   P+ 
Sbjct: 630 LDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTIWKFKLLQKLNLSGCSTFVSFPEI 689

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL----EYISSSIFKL-KSVE 357
           L  + +L  L +DGT I  LP  +  L  L  LEL++C  L    E IS  + K   +V 
Sbjct: 690 LEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYGLQEVISGRVVKSPATVG 749

Query: 358 SIEISNCSNLKG--FPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTS 414
            I+     NL G    E+P+C      I+ +PS   L L++ +  E +P S+     L  
Sbjct: 750 GIQYLRKLNLSGCCLLEVPYC------IDCLPSLESLDLSR-NLFEEIPVSINKLFELQY 802

Query: 415 LEIIDCKKLERLPD 428
           L + DCKKL  LPD
Sbjct: 803 LGLRDCKKLISLPD 816



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 20/223 (8%)

Query: 162 RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
           +L+L GCS++   P + S  ++  L L G  IEE+PSSIK    + EL + +CKR   + 
Sbjct: 606 QLILSGCSSITEFPHV-SWDIKK-LFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLP 663

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSC----------NIDGTRSKEQPSSELKLKKCPR 271
            +I+K + L+ + +  C    F+  P             +DGT     PS    ++  P 
Sbjct: 664 RTIWKFKLLQKLNLSGCST--FVSFPEILEVMGSLKYLYLDGTGISNLPSP---MRNLPG 718

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
             SL    C  K+L  L+ +      + P  +G +Q L +L + G  + E+P  +  L  
Sbjct: 719 LLSLELRSC--KNLYGLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLEVPYCIDCLPS 776

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           L  L+L   +  E I  SI KL  ++ + + +C  L   P++P
Sbjct: 777 LESLDLSR-NLFEEIPVSINKLFELQYLGLRDCKKLISLPDLP 818


>gi|147799796|emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]
          Length = 1350

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 189/448 (42%), Gaps = 88/448 (19%)

Query: 376  CNIDGSGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            C   GS +  +P          L L  C  L SLPSS+  FKSL +L    C +LE  P+
Sbjct: 929  CCFKGSDMNEVPIIENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPE 988

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
             L ++E+L +L + GT I+E+P S+ +L  L  L L+ C +  +LP  +    S  +L +
Sbjct: 989  ILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVV 1048

Query: 488  IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
              C NF +LPD +G L+ L+ L +            G L S+        N Q+   SL+
Sbjct: 1049 SRCPNFNKLPDNLGRLQSLEYLFV------------GHLDSM--------NFQL--PSLS 1086

Query: 548  QLSSLVSLKLSNNNLE-------------RIPERLDPLSSLKYLDLFE-NNLDRIPEYLR 593
             L SL +LKL + NL              RIP+ +  L +LK LDL     L  IPE   
Sbjct: 1087 GLCSLRTLKLQDCNLREFPPVKSITYHQCRIPDGISQLYNLKDLDLGHCKMLQHIPE--- 1143

Query: 594  SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW------MKQSVNGETYITKSMY 647
                 +PS    L    D  +C  L+   LS      W       K  + G  +    + 
Sbjct: 1144 -----LPSRLRCL----DAHHCTSLE--NLSSRSNLLWSSLFKCFKSRIQGREFRKTLIT 1192

Query: 648  FPGNE--IPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVVACSVSECCRHESVEDD 704
            F      IP+W  HQ +G  I++K P     N   +GF  C +     +E  +H S    
Sbjct: 1193 FIAESYGIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLHVPLDTETAKHRSF--- 1249

Query: 705  RKCNL-FDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKR---SDE-- 758
              C L FD         Y SY S    +  + E D    G  I+  ++S  +   S+E  
Sbjct: 1250 -NCKLNFD-----HDSAYFSYQSHQFCEFCYDE-DASSQGCLIYYPKSSIPKRYHSNEWR 1302

Query: 759  -----FFFHIDRSCCEVKKCGIHFVHAQ 781
                 F  +      +V +CG HF++A 
Sbjct: 1303 TLNASFNVYFGVKPVKVARCGFHFLYAH 1330



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 127/247 (51%), Gaps = 17/247 (6%)

Query: 14  TFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LHWENLV 68
           +F +M  LRLLK      K  +  H      F   EL Y  W  +PL++L I  H +NLV
Sbjct: 413 SFKEMNRLRLLKIHNPHRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPINFHAKNLV 472

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            L +  S + Q+W   +    L+ IDL +S  L ++PD S   NLEIL L  C++  +  
Sbjct: 473 ELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIPDFSSVPNLEILTLKGCTT-RDFQ 531

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
            S   + +  VLDL    ++  LP+SI H   L+ L+L+ C  L  +P    CHL S+L 
Sbjct: 532 KSKGDMREQRVLDLSG-TAIMDLPSSITHLNGLQTLLLQECLKLHQVPNHI-CHL-SSLK 588

Query: 188 LLGVG---IEE--LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL- 241
           +L +G   I E  +PS I  LS++ +L +       +I ++I +L  LE + +  C NL 
Sbjct: 589 VLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPTTINQLSRLEVLNLSHCNNLE 647

Query: 242 QFLEMPS 248
           Q  E+PS
Sbjct: 648 QIPELPS 654



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 40/329 (12%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLN------KCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           E+ + + DG  +E +P +    N      + S ++ +     +   L  +++     L+R
Sbjct: 448 ELAYLHWDGYPLESLPINFHAKNLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKR 507

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           +PD   ++  LE L ++G   R+  KS   +   ++     ++   LPS +     L +L
Sbjct: 508 IPD-FSSVPNLEILTLKGCTTRDFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTL 566

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIP 543
            + +C    ++P+ I +L  LKVL +    I E  +P  +  LSSL+ L L   +   IP
Sbjct: 567 LLQECLKLHQVPNHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIP 626

Query: 544 ESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSE 602
            ++NQLS L  L LS+ NNLE+IPE     S L+ LD   +N            TS  + 
Sbjct: 627 TTINQLSRLEVLNLSHCNNLEQIPEL---PSRLRLLDAHGSN-----------RTSSRAP 672

Query: 603 FTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS--MYFPGNE-IPKWFRH 659
           F  L     L NC     +           + S +  +Y  K   +  P  + IP+W  +
Sbjct: 673 FLPLH---SLVNCFSWAQDS---------KRTSFSDSSYHAKGTCIVLPRTDGIPEWIMY 720

Query: 660 QSTGSTISLKTPQPTGY-NKLMGFAFCVV 687
           +ST      K PQ     N+ +GFA C V
Sbjct: 721 RSTIYFTKTKLPQNWHQNNEFLGFAICCV 749



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 27/234 (11%)

Query: 258  EQPS--SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
            E PS    L L+ C    SLPS    FKSL +L    C   E  P+ L ++++L +L ++
Sbjct: 943  ENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLN 1002

Query: 316  GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            GTAI+E+P  + +L  L  L L+NC  L  +  SI  L S +++ +S C N    P+   
Sbjct: 1003 GTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPD--- 1059

Query: 376  CNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE---------- 424
                   + R+ S   L +     +     SL    SL +L++ DC   E          
Sbjct: 1060 ------NLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQDCNLREFPPVKSITYH 1113

Query: 425  --RLPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLKKCSSFESLPSR 475
              R+PD +  L  L++L +     ++ +P+  ++L    L    C+S E+L SR
Sbjct: 1114 QCRIPDGISQLYNLKDLDLGHCKMLQHIPELPSRLRC--LDAHHCTSLENLSSR 1165



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 50/254 (19%)

Query: 131  IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
            I+  ++L+ L L  C++LTSLP+SI   K L  L   GCS L++ P+ +        L L
Sbjct: 942  IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYL 1001

Query: 189  LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
             G  I+E+PSSI+ L  +  LL+ +CK L N+  SI  L   +++ + RCPN        
Sbjct: 1002 NGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFN------ 1055

Query: 249  CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI--IDCPNFERLPDELGNL 306
                                      LP      +SL  L +  +D  NF+ LP  L  L
Sbjct: 1056 -------------------------KLPDNLGRLQSLEYLFVGHLDSMNFQ-LP-SLSGL 1088

Query: 307  QALNRLIIDGTAIRE-------------LPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
             +L  L +    +RE             +P+G+ QL  L  L+L +C  L++I     +L
Sbjct: 1089 CSLRTLKLQDCNLREFPPVKSITYHQCRIPDGISQLYNLKDLDLGHCKMLQHIPELPSRL 1148

Query: 354  KSVESIEISNCSNL 367
            + +++   ++  NL
Sbjct: 1149 RCLDAHHCTSLENL 1162



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 18/169 (10%)

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIR 320
           S  + LK+ P   S+P+ + +     +L+     +F++     G+++    L + GTAI 
Sbjct: 500 SHSVHLKRIPDFSSVPNLEIL-----TLKGCTTRDFQK---SKGDMREQRVLDLSGTAIM 551

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG 380
           +LP  +  L  L  L L+ C +L  + + I  L S++ +++ +C+ ++G      C++  
Sbjct: 552 DLPSSITHLNGLQTLLLQECLKLHQVPNHICHLSSLKVLDLGHCNIMEGGIPSDICHL-- 609

Query: 381 SGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                  SS+ KLN +     S+P+++     L  L +  C  LE++P+
Sbjct: 610 -------SSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 651



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 34/266 (12%)

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN------LKN-LPK---MTSCHLRSTL 186
           +E L LDRCK   S  T+   K + RL L    N      LK+ LP+     S  L + L
Sbjct: 394 IEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPHRKLFLKDHLPRDFEFYSYEL-AYL 452

Query: 187 PLLGVGIEELPSSIKCLSNIGELL-----IYSCKRLENISSSIFKLQFLESIRIHR---- 237
              G  +E LP +     N+ EL      I    +   +   +  +    S+ + R    
Sbjct: 453 HWDGYPLESLPINFHA-KNLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIPDF 511

Query: 238 --CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC-----PRPESLPSGQCMFKSLTSLEI 290
              PNL+ L +  C    TR  ++   +++ ++           LPS       L +L +
Sbjct: 512 SSVPNLEILTLKGCT---TRDFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLL 568

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELEYISS 348
            +C    ++P+ + +L +L  L +    I E  +P  +  L+ L KL L+       I +
Sbjct: 569 QECLKLHQVPNHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLER-GHFSSIPT 627

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIP 374
           +I +L  +E + +S+C+NL+  PE+P
Sbjct: 628 TINQLSRLEVLNLSHCNNLEQIPELP 653



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 42/162 (25%)

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP----- 175
            +++ E  SSIQ L  L+ L L  CK+L +LP SI +    K LV+  C N   LP     
Sbjct: 1004 TAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGR 1063

Query: 176  -------------------------------KMTSCHLRSTLPLLGVGIEE--LPSSIKC 202
                                           K+  C+LR   P+  +   +  +P  I  
Sbjct: 1064 LQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQDCNLREFPPVKSITYHQCRIPDGISQ 1123

Query: 203  LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L N+ +L +  CK L++I     +L+ L++   H C +L+ L
Sbjct: 1124 LYNLKDLDLGHCKMLQHIPELPSRLRCLDA---HHCTSLENL 1162


>gi|215261575|gb|ACJ64855.1| disease resistance protein RPP1-like protein R1 [Arabidopsis
           thaliana]
          Length = 1093

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 175/353 (49%), Gaps = 44/353 (12%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           DD   L +LK +DL  S+ L +LP+LS A NLE L L  CSSL E  SSI+ L  L++LD
Sbjct: 574 DDTTQLRNLKWMDLSDSRDLKELPNLSTATNLEELKLRRCSSLVELPSSIEKLTSLQILD 633

Query: 142 LDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG-------VGIE 194
           L  C SL  LP+  ++  L++L L  C +L  LP        S L ++G         + 
Sbjct: 634 LRDCSSLVELPSFGNATKLEKLDLENCRSLVKLPP-------SILKIVGELSLRNCSRVV 686

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
           ELP +I+  +N+ EL + +C  LE + SSI  +  LE   +  C NL  +E+PS     +
Sbjct: 687 ELP-AIENATNLRELKLQNCSSLEKLPSSIGDMTNLEKFDLCNCSNL--VELPS-----S 738

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
               Q    L +  C + E+LP      K+L++L + DC   +R P+   +++    L++
Sbjct: 739 IGNLQKLCVLIMCGCSKLETLPI-NINLKALSTLNLTDCLQLKRFPEISTHIEL---LML 794

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            GTAI+E+P  +      S+L L   S  E +      L  +  +++S     K   E+P
Sbjct: 795 TGTAIKEVPLSIMS---WSRLTLFQMSYFESLKEFSHALDIITELQLS-----KDIQEVP 846

Query: 375 FCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
                   ++R+    +L L  C+ L SLP    +  SL  L   +CK LERL
Sbjct: 847 ------PWVKRMSRLRILGLYNCNNLVSLPQ---LPDSLAYLYADNCKSLERL 890



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 242/516 (46%), Gaps = 74/516 (14%)

Query: 297  ERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            E L D+   L+ L  + + D   ++ELP  L     L +L+L+ CS L  + SSI KL S
Sbjct: 570  EVLDDDTTQLRNLKWMDLSDSRDLKELP-NLSTATNLEELKLRRCSSLVELPSSIEKLTS 628

Query: 356  VESIEISNCSNLKGFPEIPFCNI---------DGSGIERIPSSVLK------LNKCSKLE 400
            ++ +++ +CS+L   P   F N          +   + ++P S+LK      L  CS++ 
Sbjct: 629  LQILDLRDCSSLVELPS--FGNATKLEKLDLENCRSLVKLPPSILKIVGELSLRNCSRVV 686

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQLA-L 458
             LP ++    +L  L++ +C  LE+LP  +G++  LE+  +   + + E+P S+  L  L
Sbjct: 687  ELP-AIENATNLRELKLQNCSSLEKLPSSIGDMTNLEKFDLCNCSNLVELPSSIGNLQKL 745

Query: 459  SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
              L +  CS  E+LP  + + K+L++L + DC    R P EI    ++++L + GTAI+E
Sbjct: 746  CVLIMCGCSKLETLPININL-KALSTLNLTDCLQLKRFP-EIST--HIELLMLTGTAIKE 801

Query: 519  VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
            VP S+   S L    +S    + + E  + L  +  L+LS  +++ +P  +  +S L+ L
Sbjct: 802  VPLSIMSWSRLTLFQMS--YFESLKEFSHALDIITELQLS-KDIQEVPPWVKRMSRLRIL 858

Query: 579  DLFE-NNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLRN---------CLKLDPNELSEII 627
             L+  NNL  +P+   S          SL RL     N         C KL+  E  ++I
Sbjct: 859  GLYNCNNLVSLPQLPDSLAYLYADNCKSLERLDCCFNNPWINLIFPKCFKLN-QEARDLI 917

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPTGYNKLMGFA 683
                 +Q V            PG ++P  F H++T G ++ +K   +P PT     + F 
Sbjct: 918  MHTSTRQCV----------MLPGTQVPACFNHRATSGDSLKIKLKESPLPT----TLRFK 963

Query: 684  FCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD----SYTSSYLGKISHVESDH 739
             C+++         +E +  DR+    D+  D R E  D       + Y+  I  +  +H
Sbjct: 964  ACIMLVMV------NEEMSYDRRWMSVDI--DIRDEQNDLKVQCTPNDYI--IYPLLVEH 1013

Query: 740  VFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGI 775
            ++          S +   EF  H +R+  ++++CGI
Sbjct: 1014 IYTFEFEVEEVTSTELVFEFTPHYERN-WKIRECGI 1048


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 19/296 (6%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLN-I 61
           SE+ I    F ++ +LR L    S++     VH  E V F   LR   W  +P K+L   
Sbjct: 544 SEVTICDGAFKRLHDLRFLHVYKSRDDGNNRVHIPEKVEFPPRLRLLHWAAYPSKSLPPT 603

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E LV L M  S V +LW+  Q+L +LK +DL  SK L +LPDLS A NLE   L  C
Sbjct: 604 FNLECLVELNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELPDLSNATNLEYFYLDNC 663

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL E  SS  +L+KLE L+++ C +L  +P  ++   +K++ ++GCS L+  P + S H
Sbjct: 664 ESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHMNLTSVKQVNMKGCSRLRKFP-VISRH 722

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           + +        +E++P+SI    ++  L +   ++L+ ++      Q   S+R       
Sbjct: 723 IEALDISDNTELEDMPASIASWCHLVYLDMSHNEKLQGLT------QLPTSLRHLNLSYT 776

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
               +P C I      E    EL L  C R  SLP   C   S+ +LE  DC + E
Sbjct: 777 DIESIPDC-IKALHQLE----ELCLSGCTRLASLPDLPC---SIKALEAEDCESLE 824



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 36/308 (11%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           S +E L       K+L  +++ + K L+ LPD L N   LE   ++    + E+P S A 
Sbjct: 617 SLVEKLWEGTQHLKNLKYMDLTESKNLKELPD-LSNATNLEYFYLDNCESLVEIPSSFAH 675

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L++  C + + +P+ + ++ S+  + +  C    + P    ++E L +     T
Sbjct: 676 LHKLEWLEMNNCINLQVIPAHMNLT-SVKQVNMKGCSRLRKFPVISRHIEALDI--SDNT 732

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQL-SSLVSLKLSNNNLERIPERLDPL 572
            + ++P S+     L +L +S N  LQ     L QL +SL  L LS  ++E IP+ +  L
Sbjct: 733 ELEDMPASIASWCHLVYLDMSHNEKLQ----GLTQLPTSLRHLNLSYTDIESIPDCIKAL 788

Query: 573 SSLKYLDLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLDPN 621
             L+ L L       +L  +P  +++          S+ S   +    +   NC KL   
Sbjct: 789 HQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESVSSPLYTPSARLSFTNCFKLGGE 848

Query: 622 ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
               II+           +  T S+  PG E+P  F H++ G+++S+    P G N    
Sbjct: 849 AREAIIRRS---------SDSTGSVLLPGREVPAEFDHRAQGNSLSILL--PLGGNS--Q 895

Query: 682 FAFCVVVA 689
           F  CVV++
Sbjct: 896 FMVCVVIS 903



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 25/200 (12%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  + +   ++ELP+ L     L    L NC  L  I SS   L  +E +E++
Sbjct: 629 LKNLKYMD--LTESKNLKELPD-LSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMN 685

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC NL+  P     +++ + ++++      +  CS+L   P    + + + +L+I D  +
Sbjct: 686 NCINLQVIP----AHMNLTSVKQV-----NMKGCSRLRKFP---VISRHIEALDISDNTE 733

Query: 423 LERLPDELGNLEALEELRVEGT----GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           LE +P  + +   L  L +       G+ ++P SL  L LS       +  ES+P  +  
Sbjct: 734 LEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLRHLNLS------YTDIESIPDCIKA 787

Query: 479 SKSLTSLEIIDCKNFMRLPD 498
              L  L +  C     LPD
Sbjct: 788 LHQLEELCLSGCTRLASLPD 807


>gi|108740385|gb|ABG01548.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740387|gb|ABG01549.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  C SL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCFSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSFIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 167/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCFSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSEL------------------------ 343
            LI+D      + ELP  +G    L KL+L+ C++L                        
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSFIGNAINLQNLLLDDCSSL 190

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             + SSI    ++  + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NC  L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCFSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSFIGNAINLQNLLLDDCSSLLEL 193

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 152/365 (41%), Gaps = 96/365 (26%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQY 133
           S + +L   + N ++L+ +DL Y   L +LP  +  A NL ILDL  CS+L E  SSI  
Sbjct: 92  SNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGN 151

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
              L+ LDL RC  L  LP+ I +                     + +L++ L      +
Sbjct: 152 AINLQKLDLRRCAKLLELPSFIGN---------------------AINLQNLLLDDCSSL 190

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            ELPSSI   +N+  + + +C  L  +  SI  LQ L+                      
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQ---------------------- 228

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
                    EL LK C + E LP      +SL  L + DC   +R P+   N++A   L 
Sbjct: 229 ---------ELILKGCSKLEDLPIN-INLESLDILVLNDCSMLKRFPEISTNVRA---LY 275

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE- 372
           + GTAI E+P           L +++   L+ +  S F              NL  FP  
Sbjct: 276 LCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DNLVEFPHV 311

Query: 373 ---IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTSLEIIDCK 421
              I   +++G  I+ +P  + ++++          K+ SLP    +  SL  ++  DC+
Sbjct: 312 LDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCE 368

Query: 422 KLERL 426
            LERL
Sbjct: 369 SLERL 373


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 181/373 (48%), Gaps = 42/373 (11%)

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           +R+P +   L  L RL +    ++ LP+ +G L  L++L+L+  +ELE +  SI  L  +
Sbjct: 41  DRIPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLR-GNELETLPESIGNLTLL 99

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMF 409
           + +++                   + +E +P+S+  L + SKLE        LP +L  F
Sbjct: 100 KRLDLK-----------------WNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGF 142

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS 468
             +T L+I D  +L R+P  L N   L +L +    + E+P  L +L  L+ L L   + 
Sbjct: 143 TQITELDIGD-NRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLS-ANP 200

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
            + LP  +    +LT LE+   +    LPD + NL  L  L I G  +  +PES+G L +
Sbjct: 201 LKQLPDFIGELTNLTELELYGNQ-LGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALEN 259

Query: 529 LEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           L  L   +N L  +PES+  L  L  L L++N L R+PE+   L  L  LDL  NNL  +
Sbjct: 260 LSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTL 319

Query: 589 PEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI-IKD------GWMKQSVNGETY 641
           P+++ +F     S  T+L L+ +    L +    L E+ I D      G +  SV     
Sbjct: 320 PDFVCNF-----SRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDK 374

Query: 642 ITKSMYFPGNEIP 654
           +T ++   GN+IP
Sbjct: 375 LT-TLNLSGNQIP 386



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 159/339 (46%), Gaps = 45/339 (13%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            + LPD +G+L  L  L + G  +  LPE +G L LL +L+LK  + LE + +S+  L  
Sbjct: 63  LQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLK-WNRLEALPNSLKNLTR 121

Query: 356 VESIEISNCS------NLKGFPEIPFCNIDGSGIERIP------SSVLKLNKC-SKLESL 402
           +  +E            L GF +I   +I  + + R+P      +++ KLN   ++LE L
Sbjct: 122 LSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEEL 181

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKL 461
           P+ L     LT L +     L++LPD +G L  L EL + G  +  +P SL+ L  L  L
Sbjct: 182 PAFLGKLTHLTHLNL-SANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHL 240

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREV 519
            +   +   +LP  +    +L +L ++D  N     LP+ IGNL+ L  L++    +  +
Sbjct: 241 DIG-GNLLTTLPESI---GALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRL 296

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL---------------------- 557
           PE    L  L  L LS NNL  +P+ +   S L +L L                      
Sbjct: 297 PEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILD 356

Query: 558 -SNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            SNN+L  +P+ +  L  L  L+L  N +  +P+++ + 
Sbjct: 357 VSNNDLGSLPDSVAKLDKLTTLNLSGNQIPFLPKFIANL 395



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 168/431 (38%), Gaps = 95/431 (22%)

Query: 38  LEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKY 97
           L G+   +L +      P    +++H   L  L + G+++  L + + NL  LKR+DLK+
Sbjct: 50  LAGLGRLDLSFRRLQSLPDNIGDLIH---LTELDLRGNELETLPESIGNLTLLKRLDLKW 106

Query: 98  SKLLTKLPD-LSLAQNLEILDLGY--CSSLTETHSSIQYLNKLEVLD--LDRCKSLTSLP 152
           ++ L  LP+ L     L  L+ GY   + L ET +    + +L++ D  L R     S  
Sbjct: 107 NR-LEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNF 165

Query: 153 TSIHSKYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELL 210
           T++    L R      + L+ LP       HL + L L    +++LP  I  L+N+ EL 
Sbjct: 166 TNLTKLNLAR------NQLEELPAFLGKLTHL-THLNLSANPLKQLPDFIGELTNLTELE 218

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP 270
           +Y   +L  +  S+  L                 ++   +I G      P S        
Sbjct: 219 LYG-NQLGTLPDSLSNLH----------------QLYHLDIGGNLLTTLPES-------- 253

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
                        +L +L ++D  N     LP+ +GNLQ L+ L +    +  LPE    
Sbjct: 254 -----------IGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSH 302

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
           L  LS L+L                           +NL   P+   CN       R+ +
Sbjct: 303 LLRLSTLDLS-------------------------YNNLMTLPDF-VCN-----FSRLTN 331

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC--KKLERLPDELGNLEALEELRVEGTGI 446
             L  N+ + L            L  LEI+D     L  LPD +  L+ L  L + G  I
Sbjct: 332 LHLAHNELTMLP------MHIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGNQI 385

Query: 447 REVPKSLAQLA 457
             +PK +A L 
Sbjct: 386 PFLPKFIANLT 396


>gi|227438147|gb|ACP30563.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1799

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 150/306 (49%), Gaps = 25/306 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           MS I  ++ I+   F  M  LR L+   ++      VH  E + F   L+   W  +P K
Sbjct: 535 MSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRK 594

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L      E+LV L +  +++ QLW+  Q L SLK++ L     L +LPDL+ A NLEIL
Sbjct: 595 CLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEIL 654

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           D+  C SL E HSS+  L++L+ LD+  CK L  +PT  +   L+ LV+ G   ++ LP 
Sbjct: 655 DVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPD 714

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS--SIFKLQFLESIR 234
           +++     ++P     +EE   S +  S++  L I+ C       +  S   L  + S+ 
Sbjct: 715 ISTTIRELSIP--ETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVT 772

Query: 235 -IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            I R P+        C + G +       EL +  CP+  SLP    + +SLT+L +  C
Sbjct: 773 GIERIPDC-----IKC-LHGLK-------ELSIYGCPKLASLPE---LPRSLTTLTVYKC 816

Query: 294 PNFERL 299
           P+ E L
Sbjct: 817 PSLETL 822



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 2    SKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTEL-RYFEWHQFPLKT 58
            S I + + I+   F  M +LR L    ++      +H  E + F  L R   W  +P K 
Sbjct: 1435 STIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEVYPGKC 1494

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L + L  E+LV L    SK+ QLW  +Q L +LK++DL  S  L ++PDLS A +L+ L+
Sbjct: 1495 LPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLN 1554

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  C SL E  SSI  L+KLE L+++ C SL   P+ ++   L+ L + GC  L+ +P +
Sbjct: 1555 LTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYV 1614

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCL 203
            ++     +L +    +EE P S+ CL
Sbjct: 1615 ST----KSLVIGDTMLEEFPESL-CL 1635



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 56/236 (23%)

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           PE L +L L         ++LE +      L S++ + + +C  LK  P++     + + 
Sbjct: 602 PEHLVELHLTD-------TQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLA----NATN 650

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           +E     +L +  C  L  + SS+     L SL++I CKKL+ +P  L NL +LE L + 
Sbjct: 651 LE-----ILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVP-TLFNLTSLESLVIM 704

Query: 443 G-----------TGIRE--VPKSLAQLALSK---------LKLKKCS---SFESLPSR-- 475
           G           T IRE  +P+++ +  L           L++  C+    F + PS+  
Sbjct: 705 GSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRN 764

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG----TAIREVPESLGQLS 527
           L V +S+T +E        R+PD I  L  LK L+I G     ++ E+P SL  L+
Sbjct: 765 LMVMRSVTGIE--------RIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLT 812



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSEL 343
           L SL++I C   + +P  L NL +L  L+I G+  +RELP+    +  LS  E    + L
Sbjct: 675 LQSLDMIFCKKLQVVP-TLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPE----TML 729

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIP-----FCNIDGSGIERIPSSV-------- 390
           E    S      ++ +EI  C+    F   P           +GIERIP  +        
Sbjct: 730 EEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKE 789

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L +  C KL SLP    + +SLT+L +  C  LE L
Sbjct: 790 LSIYGCPKLASLPE---LPRSLTTLTVYKCPSLETL 822



 Score = 42.4 bits (98), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 25/282 (8%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           ++LE L        SL  + ++ C  L+ LPD L N   LE L V G   + E+  S+  
Sbjct: 613 TQLEQLWEGTQPLTSLKKMVLVSCLCLKELPD-LANATNLEILDVCGCQSLVEIHSSVGN 671

Query: 456 LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L +  C   + +P+ L+   SL SL I+       LPD    +   + L+I  T
Sbjct: 672 LHRLQSLDMIFCKKLQVVPT-LFNLTSLESLVIMGSYQMRELPDISTTI---RELSIPET 727

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            + E  ES    S L+ L +    +     +     +L+ ++ S   +ERIP+ +  L  
Sbjct: 728 MLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMR-SVTGIERIPDCIKCLHG 786

Query: 575 LKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD---- 629
           LK L ++    L  +PE  RS  T    +  SL           L+P      I+D    
Sbjct: 787 LKELSIYGCPKLASLPELPRSLTTLTVYKCPSLE---------TLEPFPFGARIEDLSFL 837

Query: 630 GWMKQSVNGETYITKS---MYFPGNEIPKWFRHQSTGSTISL 668
              +        IT+    +  PG  +P  F H++ G+ +++
Sbjct: 838 DCFRLGRKARRLITQQSSRVCLPGRNVPAEFHHRAIGNFVAI 879



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 422  KLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            KLE+L   +  L  L+++ + G+  ++EVP       L +L L  C S   +PS +    
Sbjct: 1513 KLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVEIPSSIGDLH 1572

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSDNNL 539
             L  LEI  C +    P  + NL  L+ L + G   +R++P       S + LV+ D  L
Sbjct: 1573 KLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLRKIP-----YVSTKSLVIGDTML 1626

Query: 540  QIIPESL 546
            +  PESL
Sbjct: 1627 EEFPESL 1633


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 179/378 (47%), Gaps = 79/378 (20%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP+    +  L  L +      E LP+E+G LQ L  LI++ T I+ LP  +GQL  L 
Sbjct: 72  SLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLR 131

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L+L NC +L+ +   + +L+++E++                 N+  + +E +P S+ +L
Sbjct: 132 ILDLGNC-QLQQLPEGLGQLQALEAL-----------------NLSANQLEELPPSIGQL 173

Query: 394 NK-------CSKLESLPSSLCMFKSLTSLE--IIDCKKLERLPDELGNLEALEELRVEGT 444
                     ++L+ LP+    F  LT LE   ++   L  LP   G L AL+ L +   
Sbjct: 174 QALKMADLSSNRLQELPNE---FSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAEN 230

Query: 445 GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNL 503
            + ++P SL QL   +L   + +    LP+++   +SL  L++ D  NF++ LP EIG L
Sbjct: 231 QLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSD--NFLQQLPPEIGQL 288

Query: 504 EYLKVLTIKGTAIREVP-----------------------ESLGQLSSLEWLVLSDNNLQ 540
           + LK L I    ++++P                        + G+LS LE L LS+N L+
Sbjct: 289 QALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLE 348

Query: 541 IIPESLNQLSSLVSLKLSNNN-----------------------LERIPERLDPLSSLKY 577
            +P+S+ +L  L SL LSNN                        +E +PE +  L +L++
Sbjct: 349 ALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEF 408

Query: 578 LDLFENNLDRIPEYLRSF 595
           L L++N L  +P YL+  
Sbjct: 409 LILYDNELRNLPPYLQDL 426



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 203/409 (49%), Gaps = 56/409 (13%)

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +EELP  I  L N+ E+LI +   ++ + +SI +LQ           NL+ L++ +C +
Sbjct: 93  ALEELPEEIGQLQNL-EVLILNSTGIKRLPASIGQLQ-----------NLRILDLGNCQL 140

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                                + LP G    ++L +L +      E LP  +G LQAL  
Sbjct: 141 ---------------------QQLPEGLGQLQALEALNL-SANQLEELPPSIGQLQALKM 178

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC------S 365
             +    ++ELP    QL  L +L L+N + L ++ S+   L +++++ ++        +
Sbjct: 179 ADLSSNRLQELPNEFSQLTQLEELALEN-NLLSFLPSNFGGLVALKTLVLAENQLDQLPA 237

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEII 418
           +L    ++    +  + + ++P+ + +L    +L       + LP  +   ++L SL I 
Sbjct: 238 SLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFIT 297

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  +L++LP E   L+ L+EL+++   +  +P++  +L+ L +L+L + +  E+LP  + 
Sbjct: 298 E-NELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSE-NKLEALPKSIK 355

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             K L+SL + + + ++  P     ++ L  L ++G  I E+PE + +L +LE+L+L DN
Sbjct: 356 RLKKLSSLNLSNNEIYL-FPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDN 414

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL----DLFE 582
            L+ +P  L  LS+L  L +S+N  E  PE L  +  LK L    D FE
Sbjct: 415 ELRNLPPYLQDLSALRRLDISDNEFEAFPEVLYQMRQLKDLILNVDQFE 463



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 45/319 (14%)

Query: 276 PSGQCMFKSLTSLEIIDCPNF---ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           PSGQ        L++ D       ERL D   + QAL   +++   +  LP  +GQ + L
Sbjct: 27  PSGQAKAVKEQYLDLEDGRRLLQAERLADLDISYQAL---VLEEEELSSLPATIGQYSEL 83

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
             L L     LE +   I +L+++E +                  ++ +GI+R+P+S+ +
Sbjct: 84  RYLSLWGQEALEELPEEIGQLQNLEVL-----------------ILNSTGIKRLPASIGQ 126

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           L                ++L  L++ +C+ L++LP+ LG L+ALE L +    + E+P S
Sbjct: 127 L----------------QNLRILDLGNCQ-LQQLPEGLGQLQALEALNLSANQLEELPPS 169

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR--LPDEIGNLEYLKVLT 510
           + QL   K+     +  + LP+       LT LE +  +N +   LP   G L  LK L 
Sbjct: 170 IGQLQALKMADLSSNRLQELPNEF---SQLTQLEELALENNLLSFLPSNFGGLVALKTLV 226

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    + ++P SLGQL  LE L L DN+L  +P  + QL SLV L LS+N L+++P  + 
Sbjct: 227 LAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIG 286

Query: 571 PLSSLKYLDLFENNLDRIP 589
            L +LK L + EN L ++P
Sbjct: 287 QLQALKSLFITENELQQLP 305



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 204/428 (47%), Gaps = 42/428 (9%)

Query: 146 KSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCL 203
           + L+SLP +I     L+ L L G   L+ LP+ +        L L   GI+ LP+SI  L
Sbjct: 68  EELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQL 127

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+  L + +C+ L+ +   + +LQ LE++ +      Q  E+P         K    S 
Sbjct: 128 QNLRILDLGNCQ-LQQLPEGLGQLQALEALNLSAN---QLEELPPSIGQLQALKMADLSS 183

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRE 321
            +L++ P           F  LT LE +   N     LP   G L AL  L++    + +
Sbjct: 184 NRLQELPNE---------FSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQ 234

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  LGQL  L  LEL++ ++L  + + I +L+S+  +++S+    +  PEI        
Sbjct: 235 LPASLGQLKQLELLELQD-NDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEI-------G 286

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            ++ + S  +  N+   L+ LP+     K+L  L++ +  KL  LP   G L  LEEL++
Sbjct: 287 QLQALKSLFITENE---LQQLPAEFAQLKNLQELQLQE-NKLTALPRNFGKLSQLEELQL 342

Query: 442 EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV----SKSLTSLEIIDCK-NFMR- 495
               +  +PKS+        +LKK SS     + +Y+    +  + +L  +D + N++  
Sbjct: 343 SENKLEALPKSIK-------RLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNYIEE 395

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP+EI  L+ L+ L +    +R +P  L  LS+L  L +SDN  +  PE L Q+  L  L
Sbjct: 396 LPEEIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDNEFEAFPEVLYQMRQLKDL 455

Query: 556 KLSNNNLE 563
            L+ +  E
Sbjct: 456 ILNVDQFE 463



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 192/465 (41%), Gaps = 96/465 (20%)

Query: 43  FTELRYFE-WHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSK 99
           ++ELRY   W Q  L+ L   I   +NL  L             + N   +KR+     +
Sbjct: 80  YSELRYLSLWGQEALEELPEEIGQLQNLEVL-------------ILNSTGIKRLPASIGQ 126

Query: 100 LLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
           L          QNL ILDLG C  L +    +  L  LE L+L     L  LP SI    
Sbjct: 127 L----------QNLRILDLGNC-QLQQLPEGLGQLQALEALNLS-ANQLEELPPSIGQ-- 172

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
                         L  +    L S        ++ELP+    L+ + EL       LEN
Sbjct: 173 --------------LQALKMADLSSN------RLQELPNEFSQLTQLEEL------ALEN 206

Query: 220 ISSSIFKLQF--LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
              S     F  L +++       Q  ++P+      + +     +  L +      LP+
Sbjct: 207 NLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQ------LPA 260

Query: 278 GQCMFKSLTSLEIIDCPNF-ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
                +SL  L++ D  NF ++LP E+G LQAL  L I    +++LP    QL  L +L+
Sbjct: 261 QIGQLQSLVELDLSD--NFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQ 318

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           L+  ++L  +  +  KL  +E +++S                  + +E +P S+ +L K 
Sbjct: 319 LQE-NKLTALPRNFGKLSQLEELQLSE-----------------NKLEALPKSIKRLKKL 360

Query: 397 SKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           S L          P +    K+L +L+ ++   +E LP+E+  L+ LE L +    +R +
Sbjct: 361 SSLNLSNNEIYLFPKNASGIKNLIALD-LEGNYIEELPEEIQELQNLEFLILYDNELRNL 419

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
           P  L  L AL +L +   + FE+ P  LY  + L  L I++   F
Sbjct: 420 PPYLQDLSALRRLDISD-NEFEAFPEVLYQMRQLKDL-ILNVDQF 462


>gi|168014900|ref|XP_001759989.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688739|gb|EDQ75114.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 318

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 160/324 (49%), Gaps = 39/324 (12%)

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP 323
            L  C    S+P+      SL   ++  C +   LP+EL NL +L RL ++G +++  LP
Sbjct: 1   NLSGCSSLTSVPNELTNLSSLEEFDLSSCSSLTSLPNELTNLSSLKRLDLNGCSSLTSLP 60

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPFCNIDGSG 382
           + L  L+ L +L+L  CS L  +      L S+  +++S CS+LK  P E+    I+ S 
Sbjct: 61  KKLTNLSSLIRLDLSGCSSLISLPKEFTNLSSLTRLDLSGCSSLKSLPNEL----INLSS 116

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL------ 436
           + R     L L+ CS L S+P+ L    SLTS  + +   L  LP+EL NL +L      
Sbjct: 117 LTR-----LDLSGCSSLRSVPNKLINLSSLTSFNLSNFSSLTILPNELTNLSSLTRLNLS 171

Query: 437 ---------EELRVEGTGIR----------EVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
                     ELR   + IR           +P  L  ++ L+KL L  CSS  SLP  L
Sbjct: 172 SCSSLTSLPNELRNLSSMIRLDLNSFPSLTSLPNELENVSSLTKLNLSGCSSLTSLPKEL 231

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS 535
               SLT L++  C +  RLP E  NL  L  L + G +++  +P  L  LSS E +++S
Sbjct: 232 TNLSSLTRLDLNSCSSLTRLPKEFTNLFSLISLDLSGCSSLTSLPNDLTDLSSFEEIIIS 291

Query: 536 D-NNLQIIPESLNQLSSLVSLKLS 558
           D ++L  +P  L  LSSL  L LS
Sbjct: 292 DCSSLTSLPNELTNLSSLTRLDLS 315



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 131/246 (53%), Gaps = 21/246 (8%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
           L LN CS L SLP  L    SL  L++  C  L  LP E  NL +L  L + G + ++ +
Sbjct: 48  LDLNGCSSLTSLPKKLTNLSSLIRLDLSGCSSLISLPKEFTNLSSLTRLDLSGCSSLKSL 107

Query: 450 PKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL-K 507
           P  L  L+ L++L L  CSS  S+P++L    SLTS  + +  +   LP+E+ NL  L +
Sbjct: 108 PNELINLSSLTRLDLSGCSSLRSVPNKLINLSSLTSFNLSNFSSLTILPNELTNLSSLTR 167

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERI 565
           +     +++  +P  L  LSS+  L L+   +L  +P  L  +SSL  L LS  ++L  +
Sbjct: 168 LNLSSCSSLTSLPNELRNLSSMIRLDLNSFPSLTSLPNELENVSSLTKLNLSGCSSLTSL 227

Query: 566 PERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL--RLSVDLRNCLKLD--P 620
           P+ L  LSSL  LDL   ++L R+P+           EFT+L   +S+DL  C  L   P
Sbjct: 228 PKELTNLSSLTRLDLNSCSSLTRLPK-----------EFTNLFSLISLDLSGCSSLTSLP 276

Query: 621 NELSEI 626
           N+L+++
Sbjct: 277 NDLTDL 282



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 117/271 (43%), Gaps = 43/271 (15%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIREL 322
           L L  C    SLP       SL  L++  C +   LP E  NL +L RL + G ++++ L
Sbjct: 48  LDLNGCSSLTSLPKKLTNLSSLIRLDLSGCSSLISLPKEFTNLSSLTRLDLSGCSSLKSL 107

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE---------- 372
           P  L  L+ L++L+L  CS L  + + +  L S+ S  +SN S+L   P           
Sbjct: 108 PNELINLSSLTRLDLSGCSSLRSVPNKLINLSSLTSFNLSNFSSLTILPNELTNLSSLTR 167

Query: 373 -----------------------------IPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
                                         P      + +E + S + L L+ CS L SL
Sbjct: 168 LNLSSCSSLTSLPNELRNLSSMIRLDLNSFPSLTSLPNELENVSSLTKLNLSGCSSLTSL 227

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSK 460
           P  L    SLT L++  C  L RLP E  NL +L  L + G + +  +P  L  L+   +
Sbjct: 228 PKELTNLSSLTRLDLNSCSSLTRLPKEFTNLFSLISLDLSGCSSLTSLPNDLTDLSSFEE 287

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           + +  CSS  SLP+ L    SLT L++  C 
Sbjct: 288 IIISDCSSLTSLPNELTNLSSLTRLDLSSCS 318



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 19/295 (6%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
           +  L+ L+ LDL+ C SLTSLP  + +   L RL L GCS+L +LPK  T+    + L L
Sbjct: 39  LTNLSSLKRLDLNGCSSLTSLPKKLTNLSSLIRLDLSGCSSLISLPKEFTNLSSLTRLDL 98

Query: 189 LGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
            G   ++ LP+ +  LS++  L +  C  L ++ + +  L  L S  +    +L  L   
Sbjct: 99  SGCSSLKSLPNELINLSSLTRLDLSGCSSLRSVPNKLINLSSLTSFNLSNFSSLTILPNE 158

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+    S  + +          P  L +   M +    L++   P+   LP+EL N+ 
Sbjct: 159 LTNLS---SLTRLNLSSCSSLTSLPNELRNLSSMIR----LDLNSFPSLTSLPNELENVS 211

Query: 308 ALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +L +L + G +++  LP+ L  L+ L++L+L +CS L  +      L S+ S+++S CS+
Sbjct: 212 SLTKLNLSGCSSLTSLPKELTNLSSLTRLDLNSCSSLTRLPKEFTNLFSLISLDLSGCSS 271

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
           L   P       D S  E I      ++ CS L SLP+ L    SLT L++  C 
Sbjct: 272 LTSLPNDL---TDLSSFEEI-----IISDCSSLTSLPNELTNLSSLTRLDLSSCS 318



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVL 140
           +++ NL SLKR+DL     LT LP  L+   +L  LDL  CSSL         L+ L  L
Sbjct: 37  NELTNLSSLKRLDLNGCSSLTSLPKKLTNLSSLIRLDLSGCSSLISLPKEFTNLSSLTRL 96

Query: 141 DLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNLKNLPK-------MTSCHLR--STLPLLG 190
           DL  C SL SLP   I+   L RL L GCS+L+++P        +TS +L   S+L +L 
Sbjct: 97  DLSGCSSLKSLPNELINLSSLTRLDLSGCSSLRSVPNKLINLSSLTSFNLSNFSSLTILP 156

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
             +  L S  +   +    L      L N+SS I        + ++  P+L  L     N
Sbjct: 157 NELTNLSSLTRLNLSSCSSLTSLPNELRNLSSMI-------RLDLNSFPSLTSLPNELEN 209

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +          ++L L  C    SLP       SLT L++  C +  RLP E  NL +L 
Sbjct: 210 VSSL-------TKLNLSGCSSLTSLPKELTNLSSLTRLDLNSCSSLTRLPKEFTNLFSLI 262

Query: 311 RLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            L + G +++  LP  L  L+   ++ + +CS L  + + +  L S+  +++S+CS
Sbjct: 263 SLDLSGCSSLTSLPNDLTDLSSFEEIIISDCSSLTSLPNELTNLSSLTRLDLSSCS 318



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 2/103 (1%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYL 134
            +T L ++++N+ SL +++L     LT LP +L+   +L  LDL  CSSLT        L
Sbjct: 199 SLTSLPNELENVSSLTKLNLSGCSSLTSLPKELTNLSSLTRLDLNSCSSLTRLPKEFTNL 258

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK 176
             L  LDL  C SLTSLP  +      + +++  CS+L +LP 
Sbjct: 259 FSLISLDLSGCSSLTSLPNDLTDLSSFEEIIISDCSSLTSLPN 301


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 146/305 (47%), Gaps = 16/305 (5%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+  G L+ L  L +   A+  LPE  G LA L +L L N + L  +  S   L S+ +
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNA-LASLPESFGDLASLVT 59

Query: 359 IEISNCS------NLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSS 405
           + +++ +      +  G   + +  +  + +  +P S   L+         + L SLP S
Sbjct: 60  LFLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPES 119

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
                SL +L  +    L  LP+  G LE+L  L +    ++ +P+S   LA+       
Sbjct: 120 FGDLASLVTL-YLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLH 178

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
            ++  SLP      + LT+L + +      LP+  G+L  L  L +   A+  +PES G 
Sbjct: 179 ENALASLPESFGDLERLTTLNLYNNA-LASLPESFGDLASLVTLYLNDNALASLPESFGG 237

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
           L SLE L L+DN L  +PES   L+SLV+L L NN L  +PE    LSSL  L+L  N L
Sbjct: 238 LESLEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTL 297

Query: 586 DRIPE 590
             +PE
Sbjct: 298 TSLPE 302



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 146/318 (45%), Gaps = 20/318 (6%)

Query: 282 FKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
           F  L  L  ++  N     LP+  G L +L  L +   A+  LPE  G LA L  L L N
Sbjct: 5   FGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFL-N 63

Query: 340 CSELEYISSSIFKLKSVESIEISNCS------NLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            + L  +  S   L S+E + + N +      +  G   +    + G+ +  +P S   L
Sbjct: 64  DNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDL 123

Query: 394 NKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                     + L SLP S    +SL +L +     L+ LP+  G+L  L  L +    +
Sbjct: 124 ASLVTLYLHNNALASLPESFGELESLVTLNL-HTNALKSLPESFGDLAILVTLYLHENAL 182

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             +P+S   L  L+ L L   ++  SLP       SL +L + D      LP+  G LE 
Sbjct: 183 ASLPESFGDLERLTTLNLYN-NALASLPESFGDLASLVTLYLNDNA-LASLPESFGGLES 240

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L+ L +   A+  +PES G L+SL  L L +N L  +PES   LSSLV+L+L NN L  +
Sbjct: 241 LEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLTSL 300

Query: 566 PERLDPLSSLKYLDLFEN 583
           PE    L SL  L L +N
Sbjct: 301 PESFGGLESLVTLYLNDN 318


>gi|297791257|ref|XP_002863513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309348|gb|EFH39772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1327

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 177/360 (49%), Gaps = 35/360 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS------KNKCMVHSLEGVPFT--ELRYFEWH 52
           MS++  E++++  TF +M +LR LKF  S      +  C ++   G+ FT  ++RY  W 
Sbjct: 568 MSEVPKEMKLSSDTFKEMNDLRYLKFFDSSCPKECEADCNLNFPNGLRFTLEKIRYLHWL 627

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPLK      + +NL+ LK+P S++ Q+W   ++   LK +DL +S  L  L  LSLA+
Sbjct: 628 KFPLKIFPRSFNPKNLIDLKLPYSQLEQVWKGEKDTSKLKWLDLNHSSKLRTLSGLSLAR 687

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NL+ ++L  C+ L   H  ++ +  L  L+L  C SL SLP  I    LK L+L GCSN+
Sbjct: 688 NLQSMNLEGCTKLEAVHHELKNMGSLLFLNLRGCTSLESLP-KIKLNSLKTLILSGCSNV 746

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                + S  L   L L G  I+ LPS I  L  +  L +  CK+L ++  +I  L+ LE
Sbjct: 747 DEF-NLISEKLEE-LYLDGTAIKGLPSDIGNLQRLVLLKLKDCKKLLSLPDTIRNLKALE 804

Query: 232 SIRIHRCPNL--------QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
            + +  C +L            + +  +DGT  K+      +L       S+  GQ  F 
Sbjct: 805 KLILSGCSSLVSFPEVKQNLKHLKTLLLDGTAIKDVHDVVHRL-------SINQGQ--FS 855

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           S T  ++ +  +       +  L ++ RL +       LPE +  L  L  L+LK C +L
Sbjct: 856 SFTHYDLCEWRH------GINGLSSVQRLCLSRNDFTSLPESIMYLYNLKWLDLKYCKQL 909



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 193/461 (41%), Gaps = 77/461 (16%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP------------------DELGN 432
            + L  C+KLE++   L    SL  L +  C  LE LP                  DE   
Sbjct: 692  MNLEGCTKLEAVHHELKNMGSLLFLNLRGCTSLESLPKIKLNSLKTLILSGCSNVDEFNL 751

Query: 433  L-EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            + E LEEL ++GT I+ +P  +  L  L  LKLK C    SLP  +   K+L  L +  C
Sbjct: 752  ISEKLEELYLDGTAIKGLPSDIGNLQRLVLLKLKDCKKLLSLPDTIRNLKALEKLILSGC 811

Query: 491  KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS--SLEWLVLSDNNLQIIPESLNQ 548
             + +  P+   NL++LK L + GTAI++V + + +LS    ++   +  +L      +N 
Sbjct: 812  SSLVSFPEVKQNLKHLKTLLLDGTAIKDVHDVVHRLSINQGQFSSFTHYDLCEWRHGING 871

Query: 549  LSSLVSLKLSNNNLERIPERLDPLSSLKYLDL-FENNLDRIPEY--------------LR 593
            LSS+  L LS N+   +PE +  L +LK+LDL +   L  +P                L+
Sbjct: 872  LSSVQRLCLSRNDFTSLPESIMYLYNLKWLDLKYCKQLTSLPMLPPNLHWLDADGCISLK 931

Query: 594  SFPTSIP---SEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS----- 645
            +   S+    +    L  +    NC KLD    ++I+     K  +  +  + K+     
Sbjct: 932  NIENSLSLLLAATEQLHSTFIFSNCKKLDQVAKNDIVSYVRRKIQLMSDALVHKNKGSIL 991

Query: 646  -----MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSEC----- 695
                 + +PG ++P WF H+S GS +    P+    + L G A CVVV+    +      
Sbjct: 992  DVLIKICYPGWQLPVWFDHRSVGSELKQNLPRHWNEDGLTGIALCVVVSFKDYKDHNTRL 1051

Query: 696  ---CRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE-SDHVFLGSSIF---- 747
               C  E  ++D     F  +      G+    S   G I  VE S HVF+G +      
Sbjct: 1052 LVRCTSEFKKEDAPLIQFSCILG----GWTKQISDNPGDI--VEPSGHVFIGYTNLLHVM 1105

Query: 748  ---AGENSCKRSDEFFFHIDRSC-----CEVKKCGIHFVHA 780
                G         F F +         CEV KCG   ++A
Sbjct: 1106 KRDRGAKCVGTEVSFKFEVTDGAKQVTNCEVLKCGFTLIYA 1146



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 48/267 (17%)

Query: 226 KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELK---------LKKCPRPESLP 276
           KL+ L  + + R  NLQ     S N++G    E    ELK         L+ C   ESLP
Sbjct: 676 KLRTLSGLSLAR--NLQ-----SMNLEGCTKLEAVHHELKNMGSLLFLNLRGCTSLESLP 728

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNL--QALNRLIIDGTAIRELPEGLGQLALLSK 334
             +    SL +L +  C N +       NL  + L  L +DGTAI+ LP  +G L  L  
Sbjct: 729 --KIKLNSLKTLILSGCSNVDEF-----NLISEKLEELYLDGTAIKGLPSDIGNLQRLVL 781

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIP 387
           L+LK+C +L  +  +I  LK++E + +S CS+L  FPE+           +DG+ I+ + 
Sbjct: 782 LKLKDCKKLLSLPDTIRNLKALEKLILSGCSSLVSFPEVKQNLKHLKTLLLDGTAIKDVH 841

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
             V +L+          +   F S T  ++ + +        +  L +++ L +      
Sbjct: 842 DVVHRLS---------INQGQFSSFTHYDLCEWRH------GINGLSSVQRLCLSRNDFT 886

Query: 448 EVPKSLAQLA-LSKLKLKKCSSFESLP 473
            +P+S+  L  L  L LK C    SLP
Sbjct: 887 SLPESIMYLYNLKWLDLKYCKQLTSLP 913


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 168/348 (48%), Gaps = 50/348 (14%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEG------VPFTELRYFEWHQFPLKTLN 60
           E   N   FSKM +L+LL          +H+L        +P   LR+  W  +P K+L 
Sbjct: 550 EADWNLEAFSKMCKLKLL---------YIHNLRLSVGPRLLP-NSLRFLSWSWYPSKSLP 599

Query: 61  -ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
                + L  + +  S +  LW+ ++ LV+LK IDL YS  LT+ PD +   NLE L L 
Sbjct: 600 PCFQPDELAEISLVHSNIDHLWNGIKYLVNLKSIDLSYSINLTRTPDFTGIPNLEKLVLE 659

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C++L + H SI  L +L + +L  CKS+ SLP+ ++ ++L+   + GCS LK + +   
Sbjct: 660 GCTNLVKIHPSIALLKRLRIWNLRNCKSIRSLPSEVNMEFLETFDVSGCSKLKMISEFVM 719

Query: 180 CHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
              R S L L G  +E+LPSSI                 E++S S+  L  L  I I   
Sbjct: 720 QMKRLSKLYLGGTAVEKLPSSI-----------------EHLSESLVVLD-LSGIVIREQ 761

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE 297
           P  + L+    N+  +      S  L  +K P P   L +    F  L +L++ DC   E
Sbjct: 762 PYSRLLKQ---NLIAS------SFGLFPRKSPHPLIPLLASLKHFSCLRTLKLNDCNLCE 812

Query: 298 -RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
             +P+++G+L +L RL + G     LP     + LL  ++++NC  L+
Sbjct: 813 GEIPNDIGSLSSLQRLELRGNNFVSLP---ASIHLLEDVDVENCKRLQ 857



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 226/503 (44%), Gaps = 88/503 (17%)

Query: 323  PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
            P+ L +++L+        S ++++ + I  L +++SI++S   NL   P       D +G
Sbjct: 604  PDELAEISLVH-------SNIDHLWNGIKYLVNLKSIDLSYSINLTRTP-------DFTG 649

Query: 383  IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            I  +   VL+   C+ L  +  S+ + K L    + +CK +  LP E+ N+E LE   V 
Sbjct: 650  IPNLEKLVLE--GCTNLVKIHPSIALLKRLRIWNLRNCKSIRSLPSEV-NMEFLETFDVS 706

Query: 443  G-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL-YVSKSLTSLE----IIDCKNFMR 495
            G + ++ + + + Q+  LSKL L   ++ E LPS + ++S+SL  L+    +I  + + R
Sbjct: 707  GCSKLKMISEFVMQMKRLSKLYLGG-TAVEKLPSSIEHLSESLVVLDLSGIVIREQPYSR 765

Query: 496  LPDEIGNLEYLKVLTIKGTAIREVPE-------SLGQLSSLEWLVLSDNNL--QIIPESL 546
            L  +  NL    + +  G   R+ P        SL   S L  L L+D NL    IP  +
Sbjct: 766  LLKQ--NL----IASSFGLFPRKSPHPLIPLLASLKHFSCLRTLKLNDCNLCEGEIPNDI 819

Query: 547  NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFT 604
              LSSL  L+L  NN   +P  +  L  +      EN   L ++PE L   P        
Sbjct: 820  GSLSSLQRLELRGNNFVSLPASIHLLEDVD----VENCKRLQQLPE-LPDLPN-----LC 869

Query: 605  SLRLSVDLR--NCLKLDPNE-----LSEIIKDGWMK--------QSVNGETYITKSMY-- 647
             LR +  L   NCL +  N+     L  ++K  W++          +  ET+ +   +  
Sbjct: 870  RLRANFWLNCINCLSMVGNQDASYFLYSVLKR-WIEIEALSRCDMMIRQETHCSFEYFRF 928

Query: 648  -FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVAC--SVSECCRHESVEDD 704
              PG+EIP+WF +QS G T++ K P     +K +GFA C ++    + S       ++ D
Sbjct: 929  VIPGSEIPEWFNNQSVGDTVTEKLPWDACNSKWIGFAVCALIVPHDNPSAVPEKSHLDPD 988

Query: 705  RKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVF---LGSSIFAGENSCKRSDEFFF 761
              C    + C     G D         +  + SDH++   L S     EN  + +  F F
Sbjct: 989  TCC----IWCFWNDYGIDVIGVG-TNNVKQIVSDHLYLLVLPSPFRKPENYLEVN--FVF 1041

Query: 762  HIDRSC-----CEVKKCGIHFVH 779
             I R+       +VKKCG+  ++
Sbjct: 1042 KIARAVGSNRGMKVKKCGVRALY 1064



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 41/243 (16%)

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSEL-------KLKKCPRPESLPSGQCMFKSLTSLEII 291
           PNL+ L +  C       K  PS  L        L+ C    SLPS +   + L + ++ 
Sbjct: 651 PNLEKLVLEGCT---NLVKIHPSIALLKRLRIWNLRNCKSIRSLPS-EVNMEFLETFDVS 706

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C   + + + +  ++ L++L + GTA+ +LP                 S +E++S S+ 
Sbjct: 707 GCSKLKMISEFVMQMKRLSKLYLGGTAVEKLP-----------------SSIEHLSESLV 749

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
            L  +  I I          E P+  +    +      +        L  L +SL  F  
Sbjct: 750 VL-DLSGIVIR---------EQPYSRLLKQNLIASSFGLFPRKSPHPLIPLLASLKHFSC 799

Query: 412 LTSLEIIDCKKLE-RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
           L +L++ DC   E  +P+++G+L +L+ L + G     +P S+    L  + ++ C   +
Sbjct: 800 LRTLKLNDCNLCEGEIPNDIGSLSSLQRLELRGNNFVSLPASIH--LLEDVDVENCKRLQ 857

Query: 471 SLP 473
            LP
Sbjct: 858 QLP 860


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 134/306 (43%), Gaps = 38/306 (12%)

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           LRY  W+ +P  +L +     +LV L +PGS V QLW D+Q +  LKR+DL  SK L   
Sbjct: 557 LRYLLWNDYPFISLPSNFQPYHLVELNLPGSSVEQLWTDIQQMPYLKRMDLSNSKNLKMT 616

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLT--SLPTSIHSKYLKR 162
           P     QNLE LD   C SL   H SI  L +L+ L L  C SL          S  L+ 
Sbjct: 617 PCFKGMQNLERLDFAGCISLWHVHPSIGLLRELQFLSLQNCTSLVCFEFGRVSESSSLRV 676

Query: 163 LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
           L L GC+ L+N P                           L N+  L +  C  L  I  
Sbjct: 677 LCLSGCTKLENTPDFEK-----------------------LLNLEYLDMDQCTSLYKIDK 713

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQC-- 280
           SI  L  L  + +  C NL  +     N+    +       L L  C R  +LP G    
Sbjct: 714 SIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMT-------LDLCGCSRFTNLPLGSVSS 766

Query: 281 --MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
               +SL SL++  C N   +PD +G L+ L RL + G    ELP  + +L+ L+ L L 
Sbjct: 767 FHTQQSLISLDLSFC-NISIVPDAIGELRGLERLNLQGNNFTELPCTIQRLSSLAYLNLS 825

Query: 339 NCSELE 344
           +C  L+
Sbjct: 826 HCHRLQ 831



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 44/272 (16%)

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           E+L  ++  +  L R+ +  +   ++      +  L +L+   C  L ++  SI  L+ +
Sbjct: 590 EQLWTDIQQMPYLKRMDLSNSKNLKMTPCFKGMQNLERLDFAGCISLWHVHPSIGLLREL 649

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           + + + NC++L  F    F  +  S   R    VL L+ C+KLE+ P     F+ L +LE
Sbjct: 650 QFLSLQNCTSLVCFE---FGRVSESSSLR----VLCLSGCTKLENTPD----FEKLLNLE 698

Query: 417 IID---CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFES 471
            +D   C  L ++   +G+L  L  L + G T +  +P S   +  L  L L  CS F +
Sbjct: 699 YLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCSRFTN 758

Query: 472 LP----SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
           LP    S  +  +SL SL++  C                         I  VP+++G+L 
Sbjct: 759 LPLGSVSSFHTQQSLISLDLSFCN------------------------ISIVPDAIGELR 794

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
            LE L L  NN   +P ++ +LSSL  L LS+
Sbjct: 795 GLERLNLQGNNFTELPCTIQRLSSLAYLNLSH 826



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 26/303 (8%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L I++  NF   P  L N  +L  L+ +      LP    Q   L +L L   S +E + 
Sbjct: 538 LLILNHKNFSGRPSFLSN--SLRYLLWNDYPFISLPSNF-QPYHLVELNLPGSS-VEQLW 593

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           + I ++  ++ +++SN  NLK  P    C      +ER     L    C  L  +  S+ 
Sbjct: 594 TDIQQMPYLKRMDLSNSKNLKMTP----CFKGMQNLER-----LDFAGCISLWHVHPSIG 644

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRV---EG-TGIREVPKSLAQLALSKLKL 463
           + + L  L + +C  L  +  E G +     LRV    G T +   P     L L  L +
Sbjct: 645 LLRELQFLSLQNCTSL--VCFEFGRVSESSSLRVLCLSGCTKLENTPDFEKLLNLEYLDM 702

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            +C+S   +   +     L  L +  C N + +PD   N+  L  L + G + R     L
Sbjct: 703 DQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCS-RFTNLPL 761

Query: 524 GQLSSLEW------LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
           G +SS         L LS  N+ I+P+++ +L  L  L L  NN   +P  +  LSSL Y
Sbjct: 762 GSVSSFHTQQSLISLDLSFCNISIVPDAIGELRGLERLNLQGNNFTELPCTIQRLSSLAY 821

Query: 578 LDL 580
           L+L
Sbjct: 822 LNL 824


>gi|357462143|ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355490401|gb|AES71604.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1133

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 160/324 (49%), Gaps = 27/324 (8%)

Query: 14  TFSKMTELRLL------KFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHW 64
           +F  MT LR L      +         VH L+G+ +   +LR+  W  FPL++L +    
Sbjct: 620 SFKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESLPSTFSA 679

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E LV L+M GSK+ +LWD +Q L +LK IDL YSK L ++PDLS A  L ++ L +C SL
Sbjct: 680 EWLVRLEMRGSKLKKLWDGIQKLGNLKSIDLCYSKDLIEMPDLSRAPKLSLVSLDFCESL 739

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           ++ H SI    KLE L L  CK++ SL T+I SK L+RL L  CS+L     M+      
Sbjct: 740 SKLHPSILTAPKLEALLLRGCKNIESLKTNISSKSLRRLDLTDCSSLVEFSMMS--EKME 797

Query: 185 TLPLLGVGIEELPSSIKCLSNIGE-----LLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
            L L+     E  S + C S+ G+     L +  CK+L  I S +     L  + +  CP
Sbjct: 798 ELSLIQTFKLECWSFMFCKSS-GQIRPSCLSLSRCKKLNIIGSKLS--NDLMDLELVGCP 854

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE-- 297
            +      + N+     + +   EL L  C   E+LP        L  L + +C   +  
Sbjct: 855 QIN-----TSNLSLILDELRCLRELNLSSCSNLEALPENIQNNSKLAVLNLDECRKLKSL 909

Query: 298 -RLPDELGNLQALNRLIIDGTAIR 320
            +LP  L  L+A+N   +D  +I+
Sbjct: 910 PKLPASLTELRAINCTDLDIDSIQ 933



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 199/484 (41%), Gaps = 81/484 (16%)

Query: 282  FKSLTSLEIIDCPNFERLPDE--------LGNLQ----ALNRLIIDGTAIRELPEGLGQL 329
            FKS+T+L  +   N  +LPDE        L  L+     L  L   G  +  LP      
Sbjct: 621  FKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESLPSTFSA- 679

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS- 388
              L +LE++  S+L+ +   I KL +++SI++    +L   P++           R P  
Sbjct: 680  EWLVRLEMRG-SKLKKLWDGIQKLGNLKSIDLCYSKDLIEMPDLS----------RAPKL 728

Query: 389  SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
            S++ L+ C  L  L  S+     L +L +  CK +E L   + + ++L  L +       
Sbjct: 729  SLVSLDFCESLSKLHPSILTAPKLEALLLRGCKNIESLKTNISS-KSLRRLDLTDCS--- 784

Query: 449  VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
               SL + ++   K+++ S  ++          L     + CK+  ++     +L   K 
Sbjct: 785  ---SLVEFSMMSEKMEELSLIQTF--------KLECWSFMFCKSSGQIRPSCLSLSRCKK 833

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
            L I G+   ++   L  L  +    ++ +NL +I   L++L  L  L LS+ +NLE +PE
Sbjct: 834  LNIIGS---KLSNDLMDLELVGCPQINTSNLSLI---LDELRCLRELNLSSCSNLEALPE 887

Query: 568  RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
             +   S L  L     NLD   + L+S P  +P+  T LR      NC  LD + +   +
Sbjct: 888  NIQNNSKLAVL-----NLDECRK-LKSLP-KLPASLTELRAI----NCTDLDIDSIQRPM 936

Query: 628  KDGWMKQ----SVNGETYITKSMYF---PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM 680
             +  + +       G+  +  +  F   PG+ +P  F   +  S+I +         KL 
Sbjct: 937  LENILHKLHTIDNEGDRILDTNFGFTFLPGDHVPDKFGFLTRESSIVIPLDPKC---KLS 993

Query: 681  GFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
               FC++++    +   +ES           V CD    G   +    +     +  DHV
Sbjct: 994  ALIFCIILSGRYGD--YYES-----------VCCDCFQNGKIIFNWDQVVSAEMLTEDHV 1040

Query: 741  FLGS 744
             L S
Sbjct: 1041 LLSS 1044



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 172/405 (42%), Gaps = 48/405 (11%)

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSS 130
           K PGS+ ++LWD ++   +LK     Y K  T++ ++ +    EI DL   S   ++ ++
Sbjct: 574 KNPGSR-SRLWDPMEVCDTLK-----YKKG-TEVVEVIIFDISEIRDLYLTSDSFKSMTN 626

Query: 131 IQYL---NKLEVLDLDRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTL 186
           ++ L   NK+++ D  +  ++  L      S  L+ L   G   L++LP   S      L
Sbjct: 627 LRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFP-LESLPSTFSAEWLVRL 685

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            + G  +++L   I+ L N+  + +   K L            +E   + R P L  + +
Sbjct: 686 EMRGSKLKKLWDGIQKLGNLKSIDLCYSKDL------------IEMPDLSRAPKLSLVSL 733

Query: 247 PSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN---F 296
             C    + SK  PS         L L+ C   ESL +     KSL  L++ DC +   F
Sbjct: 734 DFCE---SLSKLHPSILTAPKLEALLLRGCKNIESLKT-NISSKSLRRLDLTDCSSLVEF 789

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
             + +++  L  +    ++  +     +  GQ+   S L L  C +L  I S +     +
Sbjct: 790 SMMSEKMEELSLIQTFKLECWSFM-FCKSSGQIRP-SCLSLSRCKKLNIIGSKLSN--DL 845

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +E+  C      P+I   N+     E      L L+ CS LE+LP ++     L  L 
Sbjct: 846 MDLELVGC------PQINTSNLSLILDELRCLRELNLSSCSNLEALPENIQNNSKLAVLN 899

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
           + +C+KL+ LP    +L  L  +      I  + + + +  L KL
Sbjct: 900 LDECRKLKSLPKLPASLTELRAINCTDLDIDSIQRPMLENILHKL 944


>gi|227438253|gb|ACP30616.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1791

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 150/306 (49%), Gaps = 25/306 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           MS I  ++ I+   F  M  LR L+   ++      VH  E + F   L+   W  +P K
Sbjct: 535 MSTIKDDMDISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRK 594

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L      E+LV L +  +++ QLW+  Q L SLK++ L     L +LPDL+ A NLEIL
Sbjct: 595 CLPRTFCPEHLVELHLTDTQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEIL 654

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           D+  C SL E HSS+  L++L+ LD+  CK L  +PT  +   L+ LV+ G   ++ LP 
Sbjct: 655 DVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLFNLTSLESLVIMGSYQMRELPD 714

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS--SIFKLQFLESIR 234
           +++     ++P     +EE   S +  S++  L I+ C       +  S   L  + S+ 
Sbjct: 715 ISTTIRELSIP--ETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVT 772

Query: 235 -IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            I R P+        C + G +       EL +  CP+  SLP    + +SLT+L +  C
Sbjct: 773 GIERIPDC-----IKC-LHGLK-------ELSIYGCPKLASLPE---LPRSLTTLTVYKC 816

Query: 294 PNFERL 299
           P+ E L
Sbjct: 817 PSLETL 822



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 2    SKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTEL-RYFEWHQFPLKT 58
            S I + + I+   F  M +LR L    ++      +H  E + F  L R   W  +P K 
Sbjct: 1379 STIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVRMHLPEDMSFPPLLRLLHWEVYPGKC 1438

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L + L  E+LV L    SK+ QLW  +Q L +LK++DL  S  L ++PDLS A +L+ L+
Sbjct: 1439 LPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLN 1498

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  C SL E  SSI  L+KLE L+++ C SL   P+ ++   L+ L + GC  L+ +P +
Sbjct: 1499 LTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHLNLASLETLEMVGCWQLRKIPYV 1558

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCL 203
            ++     +L +    +EE P S+ CL
Sbjct: 1559 ST----KSLVIGDTMLEEFPESL-CL 1579



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 56/236 (23%)

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           PE L +L L         ++LE +      L S++ + + +C  LK  P++     + + 
Sbjct: 602 PEHLVELHLTD-------TQLEQLWEGTQPLTSLKKMVLVSCLCLKELPDLA----NATN 650

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           +E     +L +  C  L  + SS+     L SL++I CKKL+ +P  L NL +LE L + 
Sbjct: 651 LE-----ILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVP-TLFNLTSLESLVIM 704

Query: 443 G-----------TGIRE--VPKSLAQLALSK---------LKLKKCS---SFESLPSR-- 475
           G           T IRE  +P+++ +  L           L++  C+    F + PS+  
Sbjct: 705 GSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRN 764

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG----TAIREVPESLGQLS 527
           L V +S+T +E        R+PD I  L  LK L+I G     ++ E+P SL  L+
Sbjct: 765 LMVMRSVTGIE--------RIPDCIKCLHGLKELSIYGCPKLASLPELPRSLTTLT 812



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 22/156 (14%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSEL 343
           L SL++I C   + +P  L NL +L  L+I G+  +RELP+    +  LS  E    + L
Sbjct: 675 LQSLDMIFCKKLQVVP-TLFNLTSLESLVIMGSYQMRELPDISTTIRELSIPE----TML 729

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIP-----FCNIDGSGIERIPSSV-------- 390
           E    S      ++ +EI  C+    F   P           +GIERIP  +        
Sbjct: 730 EEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKE 789

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L +  C KL SLP    + +SLT+L +  C  LE L
Sbjct: 790 LSIYGCPKLASLPE---LPRSLTTLTVYKCPSLETL 822



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 25/282 (8%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQ 455
           ++LE L        SL  + ++ C  L+ LPD L N   LE L V G   + E+  S+  
Sbjct: 613 TQLEQLWEGTQPLTSLKKMVLVSCLCLKELPD-LANATNLEILDVCGCQSLVEIHSSVGN 671

Query: 456 LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L +  C   + +P+ L+   SL SL I+       LPD    +   + L+I  T
Sbjct: 672 LHRLQSLDMIFCKKLQVVPT-LFNLTSLESLVIMGSYQMRELPDISTTI---RELSIPET 727

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            + E  ES    S L+ L +    +     +     +L+ ++ S   +ERIP+ +  L  
Sbjct: 728 MLEEFLESTRLWSHLQCLEIFGCAITHQFMAHPSQRNLMVMR-SVTGIERIPDCIKCLHG 786

Query: 575 LKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD---- 629
           LK L ++    L  +PE  RS  T    +  SL           L+P      I+D    
Sbjct: 787 LKELSIYGCPKLASLPELPRSLTTLTVYKCPSLE---------TLEPFPFGARIEDLSFL 837

Query: 630 GWMKQSVNGETYITKS---MYFPGNEIPKWFRHQSTGSTISL 668
              +        IT+    +  PG  +P  F H++ G+ +++
Sbjct: 838 DCFRLGRKARRLITQQSSRVCLPGRNVPAEFHHRAIGNFVAI 879



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 422  KLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            KLE+L   +  L  L+++ + G+  ++EVP       L +L L  C S   +PS +    
Sbjct: 1457 KLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHLKRLNLTGCWSLVEIPSSIGDLH 1516

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSLEWLVLSDNNL 539
             L  LEI  C +    P  + NL  L+ L + G   +R++P       S + LV+ D  L
Sbjct: 1517 KLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLRKIP-----YVSTKSLVIGDTML 1570

Query: 540  QIIPESL 546
            +  PESL
Sbjct: 1571 EEFPESL 1577


>gi|27466164|gb|AAN86124.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1055

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 23/224 (10%)

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +R   W  +P K+L    H E+LV + MP SK+ +LW  +Q L ++K IDL +S  L ++
Sbjct: 581 VRLLHWENYPRKSLPQRFHPEHLVKIYMPRSKLKKLWGGIQPLPNIKSIDLSFSIRLKEI 640

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
           P+LS A NLE L+L +C +L E  SSI  L+KL+ L +  C++L  +PT+I+   L+RL 
Sbjct: 641 PNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCENLRVIPTNINLASLERLD 700

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL--------------- 209
           + GCS L+  P ++S     TL L    IE++P S+ C S + +L               
Sbjct: 701 MSGCSRLRTFPDISSN--IDTLNLGDTKIEDVPPSVGCWSRLIQLNISCGPLTRLMHVPP 758

Query: 210 ----LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ-FLEMPS 248
               LI     +E I  SI  L  L  + +  C  L+  L +PS
Sbjct: 759 CITILILKGSDIERIPESIIGLTRLHWLIVESCIKLKSILGLPS 802



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 49/256 (19%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           ++E+P       L  L L  C +   LPS +     L  L++  C+N   +P  I NL  
Sbjct: 637 LKEIPNLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCENLRVIPTNI-NLAS 695

Query: 506 LKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS------ 558
           L+ L + G + +R  P+     S+++ L L D  ++ +P S+   S L+ L +S      
Sbjct: 696 LERLDMSGCSRLRTFPDI---SSNIDTLNLGDTKIEDVPPSVGCWSRLIQLNISCGPLTR 752

Query: 559 --------------NNNLERIPERLDPLSSLKYLDLFEN-----NLDRIPEYLRSFPTSI 599
                          +++ERIPE +  L+ L +L + E+     ++  +P  L+    + 
Sbjct: 753 LMHVPPCITILILKGSDIERIPESIIGLTRLHWL-IVESCIKLKSILGLPSSLQGLDAND 811

Query: 600 PSEFTSLRLS-------VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNE 652
                 +R S       ++  NCLKLD     E  K G +++SV+G  YI      PG  
Sbjct: 812 CVSLKRVRFSFHNPIHILNFNNCLKLD-----EEAKRGIIQRSVSG--YIC----LPGKN 860

Query: 653 IPKWFRHQSTGSTISL 668
           IP+ F H++TG +I++
Sbjct: 861 IPEEFTHKATGRSITI 876



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 36/198 (18%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++E+P  L     L  L L +C  L  + SSI  L  ++ +++S C NL+  P     NI
Sbjct: 637 LKEIPN-LSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCENLRVIP----TNI 691

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           + + +ER     L ++ CS+L + P    +  ++ +L + D  K+E +P  +G    L +
Sbjct: 692 NLASLER-----LDMSGCSRLRTFPD---ISSNIDTLNLGDT-KIEDVPPSVGCWSRLIQ 742

Query: 439 LRV--------------------EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           L +                    +G+ I  +P+S+  + L++L      S   L S L +
Sbjct: 743 LNISCGPLTRLMHVPPCITILILKGSDIERIPESI--IGLTRLHWLIVESCIKLKSILGL 800

Query: 479 SKSLTSLEIIDCKNFMRL 496
             SL  L+  DC +  R+
Sbjct: 801 PSSLQGLDANDCVSLKRV 818


>gi|147863085|emb|CAN78783.1| hypothetical protein VITISV_038766 [Vitis vinifera]
          Length = 439

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 167/387 (43%), Gaps = 79/387 (20%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L KLEL +C  L  +  SI  LK++ S+      NL+G                      
Sbjct: 4   LEKLELADCMSLNVVDPSIGDLKNLTSL------NLRG---------------------- 35

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN-LEALEELRVEGTGIREVP 450
               C  L SLPSSL    SL +  +  C  LE  P+  G+ ++AL  L + G GI+E+P
Sbjct: 36  ----CKNLTSLPSSLQYLDSLKTFHLDYCSNLEEFPEMKGSPMKALSYLHLGGCGIKELP 91

Query: 451 KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            S+  L  L  L L  C +  SLPS +   KSL  L + DC N    P+   +++YL +L
Sbjct: 92  SSIELLTELQCLYLSNCKNLRSLPSSICRLKSLGILSLDDCSNLDTFPEITEDMKYLGIL 151

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN--NNLERIPE 567
            ++G  I+E+P S   L SL  L +S N L  +P+S+  L SL  L L    +NLE+ P+
Sbjct: 152 DLRGIGIKELPSS-QNLKSLRRLDIS-NCLVTLPDSIYNLRSLEDLTLRGCCSNLEKFPK 209

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSL--RLSVDLRNCLKLD-----P 620
             +    L+ LDL   N+             IPS F+ L     +D+ +C KL      P
Sbjct: 210 NPEGFCYLERLDLSHCNV----------MVGIPSGFSQLCKLRYLDISHCKKLLDIPDLP 259

Query: 621 NELSEI--------------------IKDGWMKQSVNGETYITKS-MYFPGNEIPKWFRH 659
           + L EI                        W   + N      +  M      IP W  H
Sbjct: 260 SSLREIDAHYCTKLEMLSSPSSLLWSSLLKWFNPTSNEHLNCKEGKMILINGGIPGWVFH 319

Query: 660 QSTGSTISLKTPQPTGY--NKLMGFAF 684
           Q  GS + ++ P P  Y  +  +GFAF
Sbjct: 320 QEIGSQVRIEPP-PNWYEDDHFLGFAF 345



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 140/276 (50%), Gaps = 32/276 (11%)

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSN 170
           NLE L+L  C SL     SI  L  L  L+L  CK+LTSLP+S+ +   LK   L  CSN
Sbjct: 3   NLEKLELADCMSLNVVDPSIGDLKNLTSLNLRGCKNLTSLPSSLQYLDSLKTFHLDYCSN 62

Query: 171 LKNLPKMTSCHLR--STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           L+  P+M    ++  S L L G GI+ELPSSI+ L+ +  L + +CK L ++ SSI +L+
Sbjct: 63  LEEFPEMKGSPMKALSYLHLGGCGIKELPSSIELLTELQCLYLSNCKNLRSLPSSICRLK 122

Query: 229 FLESIRIHRCPNLQ-FLEMPS-------CNIDGTRSKEQPSSELKLKKCPRPESLPSGQC 280
            L  + +  C NL  F E+          ++ G   KE PSS+                 
Sbjct: 123 SLGILSLDDCSNLDTFPEITEDMKYLGILDLRGIGIKELPSSQ----------------- 165

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG--TAIRELPEGLGQLALLSKLELK 338
             KSL  L+I +C     LPD + NL++L  L + G  + + + P+       L +L+L 
Sbjct: 166 NLKSLRRLDISNC--LVTLPDSIYNLRSLEDLTLRGCCSNLEKFPKNPEGFCYLERLDLS 223

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           +C+ +  I S   +L  +  ++IS+C  L   P++P
Sbjct: 224 HCNVMVGIPSGFSQLCKLRYLDISHCKKLLDIPDLP 259



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 124/251 (49%), Gaps = 15/251 (5%)

Query: 65  ENLVSLKMPGSK-VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL--SLAQNLEILDLGYC 121
           +NL SL + G K +T L   +Q L SLK   L Y   L + P++  S  + L  L LG C
Sbjct: 26  KNLTSLNLRGCKNLTSLPSSLQYLDSLKTFHLDYCSNLEEFPEMKGSPMKALSYLHLGGC 85

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMT-S 179
             + E  SSI+ L +L+ L L  CK+L SLP+SI   K L  L L  CSNL   P++T  
Sbjct: 86  -GIKELPSSIELLTELQCLYLSNCKNLRSLPSSICRLKSLGILSLDDCSNLDTFPEITED 144

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                 L L G+GI+ELPSS + L ++  L I +C  L  +  SI+ L+ LE + +  C 
Sbjct: 145 MKYLGILDLRGIGIKELPSS-QNLKSLRRLDISNC--LVTLPDSIYNLRSLEDLTLRGC- 200

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
               LE    N +G    E+    L L  C     +PSG      L  L+I  C     +
Sbjct: 201 -CSNLEKFPKNPEGFCYLER----LDLSHCNVMVGIPSGFSQLCKLRYLDISHCKKLLDI 255

Query: 300 PDELGNLQALN 310
           PD   +L+ ++
Sbjct: 256 PDLPSSLREID 266


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 175/342 (51%), Gaps = 31/342 (9%)

Query: 278 GQCMFKSLTSL-EIID------CPNFER-----LPDELGNLQALNRLIIDGTAIRELPEG 325
           G  + K++TSL ++I+      C +  R     LP E+G L++L+ L ++G     L   
Sbjct: 61  GYPLLKNITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPV 120

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNI 378
           +G+L  L  L+L + ++LE +S  I +LK++  +++S  + L+  P        +   ++
Sbjct: 121 IGELKNLKYLDLYD-NKLERLSPEIGRLKNLRELDLSG-NKLRTLPSEIGELVNLGILHL 178

Query: 379 DGSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           + + +ER+P  + +L          + LE+LP ++   K       ++  KL+ LP E+G
Sbjct: 179 NDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIG 238

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            L  L  L +    +  +P  + +L  L +L L   ++ E+LP  +   K L  L  ++ 
Sbjct: 239 ELVNLGILHLNDNKLERLPPEIGRLKNLRELGL-NGNNLEALPETIRELKKLQYL-YLNG 296

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                LP EIG L++L VL + G  +  +P  +G+L  L  L L+DN  + +P  + +L 
Sbjct: 297 NKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLK 356

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +L  L LS N LER+P  +  L +L+ LDL  N L+ +P Y+
Sbjct: 357 NLRHLHLSGNKLERLPYVIAELKNLRELDLSGNKLETLPSYI 398



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 26/200 (13%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           ++ E+L   +   K+L  L++ D  KLERL  E+G L+ L EL + G  +R +P  + +L
Sbjct: 112 NEFETLSPVIGELKNLKYLDLYD-NKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGEL 170

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
                                   +L  L + D K   RLP EIG L+ L  L + G  +
Sbjct: 171 V-----------------------NLGILHLNDNK-LERLPPEIGRLKDLWRLYLNGNNL 206

Query: 517 REVPESLGQLSSLEW-LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
             +PE++  L    W L L+ N L+ +P  + +L +L  L L++N LER+P  +  L +L
Sbjct: 207 EALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNL 266

Query: 576 KYLDLFENNLDRIPEYLRSF 595
           + L L  NNL+ +PE +R  
Sbjct: 267 RELGLNGNNLEALPETIREL 286



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 8/169 (4%)

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
             SLP  +   +SL  L  ++   F  L   IG L+ LK L +    +  +   +G+L +
Sbjct: 91  LRSLPPEIGELESLDGL-YLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKN 149

Query: 529 LEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           L  L LS N L+ +P  + +L +L  L L++N LER+P  +  L  L  L L  NNL+ +
Sbjct: 150 LRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEAL 209

Query: 589 PEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVN 637
           PE + +    +   + +        N LK  P E+ E++  G +  + N
Sbjct: 210 PETIENLKDRLWYLYLN-------GNKLKTLPPEIGELVNLGILHLNDN 251



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 172/396 (43%), Gaps = 64/396 (16%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           +T L D ++ L  L  +DL   +L +  P++   ++L+ L L   +        I  L  
Sbjct: 68  ITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLN-GNEFETLSPVIGELKN 126

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
           L+ LDL             +   L+RL       LKNL           L L G  +  L
Sbjct: 127 LKYLDL-------------YDNKLERLSPE-IGRLKNL---------RELDLSGNKLRTL 163

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS 256
           PS I  L N+G +L  +  +LE +   I +L+ L  + ++   NL+ L     N+   R 
Sbjct: 164 PSEIGELVNLG-ILHLNDNKLERLPPEIGRLKDLWRLYLN-GNNLEALPETIENLK-DRL 220

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLII 314
                +  KLK  P PE           L +L I+   +   ERLP E+G L+ L  L +
Sbjct: 221 WYLYLNGNKLKTLP-PE--------IGELVNLGILHLNDNKLERLPPEIGRLKNLRELGL 271

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           +G  +  LPE + +L  L  L L N ++L+ +   I +LK +  +               
Sbjct: 272 NGNNLEALPETIRELKKLQYLYL-NGNKLKTLPPEIGELKWLLVL--------------- 315

Query: 375 FCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
             +++G+ +ER+P  + +L          ++ E+LPS +   K+L  L  +   KLERLP
Sbjct: 316 --HLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLH-LSGNKLERLP 372

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             +  L+ L EL + G  +  +P  + ++    L+L
Sbjct: 373 YVIAELKNLRELDLSGNKLETLPSYIVRMLSGSLQL 408



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 171/398 (42%), Gaps = 97/398 (24%)

Query: 35  VHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRID 94
           + SL+G+      Y   ++F   +  I   +NL  L +  +K+ +L  ++  L +L+ +D
Sbjct: 101 LESLDGL------YLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNLRELD 154

Query: 95  LKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS 154
           L  +KL T LP                       S I  L  L +L L+  K L  LP  
Sbjct: 155 LSGNKLRT-LP-----------------------SEIGELVNLGILHLNDNK-LERLPPE 189

Query: 155 IHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL---GVGIEELPSSIKCLSNIGELL 210
           I   K L RL L G +NL+ LP+ T  +L+  L  L   G  ++ LP  I  L N+G +L
Sbjct: 190 IGRLKDLWRLYLNG-NNLEALPE-TIENLKDRLWYLYLNGNKLKTLPPEIGELVNLG-IL 246

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP 270
             +  +LE +   I +L+           NL+ L +   N+                   
Sbjct: 247 HLNDNKLERLPPEIGRLK-----------NLRELGLNGNNL------------------- 276

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
             E+LP      K L  L  ++    + LP E+G L+ L  L ++G  +  LP  +G+L 
Sbjct: 277 --EALPETIRELKKLQYL-YLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELE 333

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV 390
            L  L L N +E E + S I KLK++  + +S                 G+ +ER+P  +
Sbjct: 334 GLYTLYL-NDNEFETLPSEIGKLKNLRHLHLS-----------------GNKLERLPYVI 375

Query: 391 LKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCK 421
            +L          +KLE+LPS +    S  SL+++D +
Sbjct: 376 AELKNLRELDLSGNKLETLPSYIVRMLS-GSLQLLDLR 412


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 126/243 (51%), Gaps = 7/243 (2%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL- 59
           M  +  E+Q+   TF  M  LR+L     +N  +  + + +P   LR  EW+++PL +L 
Sbjct: 572 MPNLKQEVQLKANTFDDMKRLRILIV---RNGQVSGAPQNLP-NNLRLLEWNKYPLTSLP 627

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +  H + LV L +P S +T + +  +    L  ++      LTKLPD+S   NL  + + 
Sbjct: 628 DSFHPKTLVVLNLPKSHIT-MDEPFKKFEHLTFMNFSDCDSLTKLPDVSATPNLTRILVN 686

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MT 178
            C +L + H SI  L+KL  L  + C +L S P  + SKYL+ L LR CS++ N P  + 
Sbjct: 687 NCENLVDIHESIGDLDKLVTLSTEGCPNLKSFPRGLRSKYLEYLNLRKCSSIDNFPDVLA 746

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                  + + G  I++ PSSI+    + EL++ SC  +E++ S+    Q ++ + +  C
Sbjct: 747 KVENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNIDELNVEGC 806

Query: 239 PNL 241
           P L
Sbjct: 807 PQL 809



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 90/332 (27%)

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIR 447
           + +  + C  L  LP  +    +LT + + +C+ L  + + +G+L+ L  L  EG   ++
Sbjct: 658 TFMNFSDCDSLTKLPD-VSATPNLTRILVNNCENLVDIHESIGDLDKLVTLSTEGCPNLK 716

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
             P+ L    L  L L+KCSS +                     NF   PD +  +E +K
Sbjct: 717 SFPRGLRSKYLEYLNLRKCSSID---------------------NF---PDVLAKVENMK 752

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLN--------------QLSSL 552
            + I GTAI++ P S+     LE LVL+  +N++ +P + +              QL  L
Sbjct: 753 NIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNIDELNVEGCPQLPKL 812

Query: 553 VSLKLSNNNLERIPERLDPLS-------------------SLKYLDLFENNLDRIP---- 589
           +   L N   + +P +L  LS                    LK+L L +NN   IP    
Sbjct: 813 LWKSLENRTTDWLP-KLSNLSLKNCNLSDEDLELILKCFLQLKWLILSDNNFLTIPVCIK 871

Query: 590 -------------EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
                        ++LR      P         +D R C+ L P+  SE++    + Q+ 
Sbjct: 872 DLSHLLLLNIENCKHLRDISVLPP-----YLQYIDARMCMALTPHS-SEVL----LSQAF 921

Query: 637 NGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
               YI   +  P  +IP WF H + G +IS 
Sbjct: 922 QEVEYI--DIVVPRTKIPSWFDHCNKGESISF 951



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 38/264 (14%)

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
           N L +L+ ++   LTSLP S H K L  L L       + P     HL          + 
Sbjct: 611 NNLRLLEWNKY-PLTSLPDSFHPKTLVVLNLPKSHITMDEPFKKFEHLTFMNFSDCDSLT 669

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
           +LP  +    N+  +L+ +C+ L +I  SI  L  L ++    CPNL+            
Sbjct: 670 KLPD-VSATPNLTRILVNNCENLVDIHESIGDLDKLVTLSTEGCPNLK------------ 716

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
                              S P G    K L  L +  C + +  PD L  ++ +  + I
Sbjct: 717 -------------------SFPRG-LRSKYLEYLNLRKCSSIDNFPDVLAKVENMKNIDI 756

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            GTAI++ P  +     L +L L +CS +E + S+    ++++ + +  C  L   P++ 
Sbjct: 757 GGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNIDELNVEGCPQL---PKLL 813

Query: 375 FCNIDGSGIERIPS-SVLKLNKCS 397
           + +++    + +P  S L L  C+
Sbjct: 814 WKSLENRTTDWLPKLSNLSLKNCN 837


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 151/311 (48%), Gaps = 37/311 (11%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
             +L +L+I D     ++P ELG L++L  L + G  +RE+P  LGQL  L +L L   +
Sbjct: 30  LGNLITLDISD-KGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAG-N 87

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           +L  + + + +L+S++ + +S  + L G P      +   G++ +  S       ++L  
Sbjct: 88  QLREVPAELGQLRSLQELYLSG-NQLTGIP-TELGQL--RGLQELYLS------GNQLRE 137

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
           +P+ L   + L  L++    +L  +P ELG L  L  L + G  +REVP  L QL+    
Sbjct: 138 VPTELGQLRDLHMLDL-SGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLS---- 192

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           +L+K          LY++ +              +P E+G L  L+ L + G  +REVP 
Sbjct: 193 RLEK----------LYLAGN----------QLREVPAELGQLRGLQELYLSGNQLREVPT 232

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            LGQL  L+ L LS N L  IP  L QL  L  L L+ N L  +P  L  L  L  LDL 
Sbjct: 233 ELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLS 292

Query: 582 ENNLDRIPEYL 592
            N L  +P  L
Sbjct: 293 GNQLREVPAEL 303



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 131/272 (48%), Gaps = 29/272 (10%)

Query: 376 CNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            +I   G+ ++P+ + +L          ++L  +P+ L   +SL  L  +   +L  +P 
Sbjct: 36  LDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQEL-YLAGNQLREVPA 94

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           ELG L +L+EL + G  +  +P  L QL  L +L L   +    +P+ L   + L  L++
Sbjct: 95  ELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLS-GNQLREVPTELGQLRDLHMLDL 153

Query: 488 IDCKNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
               N +R +P E+G L  L +L + G  +REVP  LGQLS LE L L+ N L+ +P  L
Sbjct: 154 --SGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAEL 211

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF----------- 595
            QL  L  L LS N L  +P  L  L  L+ LDL  N L  IP  L              
Sbjct: 212 GQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGN 271

Query: 596 -PTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
               +P+E   LR   DL + L L  N+L E+
Sbjct: 272 QLREVPAELGQLR---DL-HMLDLSGNQLREV 299



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 21/287 (7%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
            +P+     +SL  L +        +P ELG L++L  L + G  +RE+P  LGQL  L 
Sbjct: 45  QVPAELGQLRSLQELYLFGN-QLREVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQ 103

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNC------SNLKGFPEIPFCNIDGSGIERIP 387
           +L L + ++L  I + + +L+ ++ + +S        + L    ++   ++ G+ +  +P
Sbjct: 104 ELYL-SGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVP 162

Query: 388 SSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
           + + +L          ++L  +P+ L     L  L  +   +L  +P ELG L  L+EL 
Sbjct: 163 AELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKL-YLAGNQLREVPAELGQLRGLQELY 221

Query: 441 VEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPD 498
           + G  +REVP  L QL  L +L L   +    +P+ L     L  L +    N +R +P 
Sbjct: 222 LSGNQLREVPTELGQLRDLQELDLS-GNQLTGIPTELGQLCGLQDLYL--AGNQLREVPA 278

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
           E+G L  L +L + G  +REVP  LGQLS L    + DN+  + P S
Sbjct: 279 ELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQLLTPPS 325


>gi|297741884|emb|CBI33319.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 120/226 (53%), Gaps = 12/226 (5%)

Query: 376 CNIDGSGIERIPS-------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           C   GS +  +P          L L  C  L SLPSS+  FKSL +L    C +LE  P+
Sbjct: 421 CCFKGSDMNEVPIIKNPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPE 480

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            L ++E+L +L + GT I+E+P S+ +L  L  L L+ C +  +LP  +    S  +L +
Sbjct: 481 ILQDMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVV 540

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIK--GTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
             C NF +LPD +G L+ L  L++    +   ++P SL  L SL  L L   NL+  P  
Sbjct: 541 ESCPNFKKLPDNLGRLQSLLHLSVGHLDSMNFQLP-SLSGLCSLRTLRLKGCNLREFPSE 599

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPE 590
           +  LSSLV+L L  N+  RIP+ +  L +L++LDL     L  IPE
Sbjct: 600 IYYLSSLVTLSLRGNHFSRIPDGISQLYNLEHLDLGHCKMLQHIPE 645



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 25/226 (11%)

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-- 373
           G+ + E+P  +   + L  L L++C  L  + SSIF  KS+ ++  S CS L+ FPEI  
Sbjct: 425 GSDMNEVP-IIKNPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 483

Query: 374 -----PFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
                    ++G+ I+ IPSS+        L L  C  L +LP S+C   S  +L +  C
Sbjct: 484 DMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVESC 543

Query: 421 KKLERLPDELGNLEALEELRVEGTGIR--EVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
              ++LPD LG L++L  L V        ++P      +L  L+LK C +    PS +Y 
Sbjct: 544 PNFKKLPDNLGRLQSLLHLSVGHLDSMNFQLPSLSGLCSLRTLRLKGC-NLREFPSEIYY 602

Query: 479 SKSLTSLEIIDCKNFMRLPDEIG---NLEYLKVLTIKGTAIREVPE 521
             SL +L +    +F R+PD I    NLE+L +   K   ++ +PE
Sbjct: 603 LSSLVTLSLRG-NHFSRIPDGISQLYNLEHLDLGHCK--MLQHIPE 645



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C    SLPS    FKSL +L    C   E  P+ L ++++L +L ++GTAI+E+P
Sbjct: 443 LCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIP 502

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             + +L  L  L L+NC  L  +  SI  L S +++ + +C N K  P+          +
Sbjct: 503 SSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVESCPNFKKLPD---------NL 553

Query: 384 ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRV 441
            R+  S+L L+    L+S+   L     L SL  +  K   L   P E+  L +L  L +
Sbjct: 554 GRL-QSLLHLS-VGHLDSMNFQLPSLSGLCSLRTLRLKGCNLREFPSEIYYLSSLVTLSL 611

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
            G     +P  ++QL  L  L L  C   + +P
Sbjct: 612 RGNHFSRIPDGISQLYNLEHLDLGHCKMLQHIP 644



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 49/278 (17%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
           I+  ++L+ L L  C++LTSLP+SI   K L  L   GCS L++ P+ +        L L
Sbjct: 434 IKNPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYL 493

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
            G  I+E+PSSI+ L  +  LL+ +CK L N+  SI  L   +++ +  CPN +      
Sbjct: 494 NGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVESCPNFK------ 547

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI--IDCPNFERLPDELGNL 306
                                     LP      +SL  L +  +D  NF+ LP  L  L
Sbjct: 548 -------------------------KLPDNLGRLQSLLHLSVGHLDSMNFQ-LPS-LSGL 580

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
            +L  L + G  +RE P  +  L+ L  L L+  +    I   I +L ++E +++ +C  
Sbjct: 581 CSLRTLRLKGCNLREFPSEIYYLSSLVTLSLRG-NHFSRIPDGISQLYNLEHLDLGHCKM 639

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
           L+  PE+P      SG+       L  + C+ LE+L S
Sbjct: 640 LQHIPELP------SGLR-----CLDAHHCTSLENLSS 666



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 37/246 (15%)

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPL 572
           + + ++P  +  LSSL+ L L   +   IP ++NQLS L +L LS+ NNLE+IPE     
Sbjct: 89  SKLHQIPSHICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPEL---P 145

Query: 573 SSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWM 632
           S L+ LD   +N            TS  + F  L     L NC     +       D   
Sbjct: 146 SRLQLLDAHGSN-----------HTSSRAPFLPLH---SLVNCFSWAQDSQLTSFSDS-- 189

Query: 633 KQSVNGETYITKSMYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGFAFCVVVAC 690
             S +G+      ++ PG++ IP+W   ++       + PQ     N+ +GFA C V   
Sbjct: 190 --SYHGK---GTCIFLPGSDGIPEWIMGRTNRHFTRTELPQNWHQNNEFLGFAICCVYVP 244

Query: 691 SVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGE 750
              E    E + +    +   +  D +SE   ++T          E+DH  +  S    E
Sbjct: 245 LAYE---SEDIPEKESAHGSKIESDNKSEDESAHTREN-------ETDHKSVAESFRKNE 294

Query: 751 NSCKRS 756
           +  + S
Sbjct: 295 HKHRHS 300



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 28/154 (18%)

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP----- 175
           +++ E  SSI+ L  L+ L L  CK+L +LP SI +    K LV+  C N K LP     
Sbjct: 496 TAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVESCPNFKKLPDNLGR 555

Query: 176 -----KMTSCHLRS---------------TLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
                 ++  HL S               TL L G  + E PS I  LS++  L +    
Sbjct: 556 LQSLLHLSVGHLDSMNFQLPSLSGLCSLRTLRLKGCNLREFPSEIYYLSSLVTLSLRG-N 614

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
               I   I +L  LE + +  C  LQ + E+PS
Sbjct: 615 HFSRIPDGISQLYNLEHLDLGHCKMLQHIPELPS 648



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS 468
           K L +L + +C KL ++P  +  L +L++L +EG     +P ++ QL+ L  L L  C++
Sbjct: 78  KGLQTLLLQECSKLHQIPSHICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNN 137

Query: 469 FES---LPSRL 476
            E    LPSRL
Sbjct: 138 LEQIPELPSRL 148


>gi|297848110|ref|XP_002891936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337778|gb|EFH68195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1064

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 136/257 (52%), Gaps = 15/257 (5%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLKTLNIL 62
           +E+ I+     +M+ LR L    ++      VH  E + F   LR   W  +P K+L + 
Sbjct: 540 AEVIISDRALRRMSNLRFLSVYKTRYNGNDRVHIPEEIEFPPRLRLLHWEAYPKKSLPLR 599

Query: 63  H-WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L M  S++ +LW+  Q L +LK++D   S+ L +LPDLS A NL+ L L  C
Sbjct: 600 FCLENLVELYMRDSQLEKLWEGAQPLTNLKKMDFSSSRKLKELPDLSNATNLKRLQLNGC 659

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           +SL E  S+I  L+KLE L ++ C +L  +PT I+   L+R+ + GCS L+  P M++  
Sbjct: 660 TSLVEIPSTIANLHKLEDLVMNSCVNLEVVPTHINLASLERIYMIGCSRLRTFPDMSTN- 718

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC---KRLENISSSIFKLQF----LESIR 234
             S L +    +E++P+SI+  S +  + I      K L +   S++ L      +E I 
Sbjct: 719 -ISQLLMSETAVEKVPASIRLWSRLSYVDIRGSGNLKTLTHFPESLWSLDLSYTDIEKIP 777

Query: 235 --IHRCPNLQFLEMPSC 249
             I R  +LQ LE+  C
Sbjct: 778 YCIKRIHHLQSLEVTGC 794



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/416 (21%), Positives = 172/416 (41%), Gaps = 67/416 (16%)

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLAL 458
           +SLP   C+ ++L  L + D  +LE+L +    L  L+++    +  ++E+P       L
Sbjct: 594 KSLPLRFCL-ENLVELYMRD-SQLEKLWEGAQPLTNLKKMDFSSSRKLKELPDLSNATNL 651

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +L+L  C+S   +PS +     L  L +  C N   +P  I      ++  I  + +R 
Sbjct: 652 KRLQLNGCTSLVEIPSTIANLHKLEDLVMNSCVNLEVVPTHINLASLERIYMIGCSRLRT 711

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLS--SLVSLKLSNN--NLERIPERLDPLSS 574
            P+    +S    L++S+  ++ +P S+   S  S V ++ S N   L   PE      S
Sbjct: 712 FPDMSTNISQ---LLMSETAVEKVPASIRLWSRLSYVDIRGSGNLKTLTHFPE------S 762

Query: 575 LKYLDLFENNLDRIP------EYLRSFP-------TSIPSEFTSLRL------------- 608
           L  LDL   ++++IP       +L+S          S+P   +SLRL             
Sbjct: 763 LWSLDLSYTDIEKIPYCIKRIHHLQSLEVTGCRKLASLPELPSSLRLLMAEDCKSLENVT 822

Query: 609 --------SVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
                    ++  NC KL       II+            ++ + +  PG E+P  F HQ
Sbjct: 823 SPLRTPNAKLNFTNCFKLGGESRRVIIQS----------LFLYEFVCLPGREMPPEFNHQ 872

Query: 661 STGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEG 720
           + G+++++   +   ++    F  CV+++ +      H   +++R+  L   +  +    
Sbjct: 873 ARGNSLTIINEKDCSFSGSSKFKVCVMISPN-----HHHHTKENRELRLKYGIIGKSGYR 927

Query: 721 YDSYTSSYLGKISHVESDHVFLGSSIFAGENS-CKRSDEFFFHIDRSCCEVKKCGI 775
           Y  +   +  +   + +DH+ +    F GE        +  F      CE+ +CG+
Sbjct: 928 YPIFI-VHPRESPGIRTDHLCIFHCDFPGEEILLDVGSKILFEFSSRYCEIIECGV 982



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 36/277 (12%)

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSE--------LKLKKCPRPESLPSGQCMFKSLT 286
           + R  NL+FL +     +G      P           L  +  P+ +SLP   C+ ++L 
Sbjct: 549 LRRMSNLRFLSVYKTRYNGNDRVHIPEEIEFPPRLRLLHWEAYPK-KSLPLRFCL-ENLV 606

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEY 345
            L + D    E+L +    L  L ++    +  ++ELP+ L     L +L+L  C+ L  
Sbjct: 607 ELYMRD-SQLEKLWEGAQPLTNLKKMDFSSSRKLKELPD-LSNATNLKRLQLNGCTSLVE 664

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           I S+I  L  +E + +++C NL+  P     +I+ + +ERI      +  CS+L + P  
Sbjct: 665 IPSTIANLHKLEDLVMNSCVNLEVVP----THINLASLERI-----YMIGCSRLRTFPD- 714

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG----IREVPKSLAQLALSKL 461
             M  +++ L ++    +E++P  +     L  + + G+G    +   P+SL  L LS  
Sbjct: 715 --MSTNISQL-LMSETAVEKVPASIRLWSRLSYVDIRGSGNLKTLTHFPESLWSLDLSY- 770

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
                +  E +P  +     L SLE+  C+    LP+
Sbjct: 771 -----TDIEKIPYCIKRIHHLQSLEVTGCRKLASLPE 802


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
           thaliana]
          Length = 1207

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 178/384 (46%), Gaps = 85/384 (22%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           ++R  +W+ +    L +  + E LV L M  SK+ +LW+  + L +LK +DL  S+ L +
Sbjct: 672 KIRSLKWYSYQNICLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKE 731

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LP+LS A NLE L L  CSSL E  SSI+ L  L+ L L RC SL  LP+  ++  L+ L
Sbjct: 732 LPNLSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEEL 791

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L  CS+L                      E+LP SI   +N+ +L + +C R+      
Sbjct: 792 YLENCSSL----------------------EKLPPSINA-NNLQQLSLINCSRV------ 822

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                 +E   I    NLQ L++ +C           SS L+L     P S+ S      
Sbjct: 823 ------VELPAIENATNLQVLDLHNC-----------SSLLEL-----PPSIASA----T 856

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L+I  C +  +LP  +G++  L+                        L+L NCS L
Sbjct: 857 NLKKLDISGCSSLVKLPSSIGDMTNLD-----------------------VLDLSNCSSL 893

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
             +  +I  LKS  ++ ++ CS LK FPEI    I     +R+     L++N C+ L SL
Sbjct: 894 VELPINI-NLKSFLAVNLAGCSQLKSFPEIS-TKIFTDCYQRMSRLRDLRINNCNNLVSL 951

Query: 403 PSSLCMFKSLTSLEIIDCKKLERL 426
           P    +  SL  L   +CK LERL
Sbjct: 952 PQ---LPDSLAYLYADNCKSLERL 972



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 176/389 (45%), Gaps = 72/389 (18%)

Query: 305  NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            N + L  L +  + +R+L EG  QL  L  ++L N  +L+ + + +    ++E +++ +C
Sbjct: 691  NPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELPN-LSTATNLEELKLRDC 749

Query: 365  SNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEII---DC 420
            S+L   P         S IE++ S   L L +CS L  LPS    F + T LE +   +C
Sbjct: 750  SSLVELP---------SSIEKLTSLQRLYLQRCSSLVELPS----FGNATKLEELYLENC 796

Query: 421  KKLERLPDELGNLEALEELR-VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVS 479
              LE+LP  + N   L++L  +  + + E+P       L  L L  CSS   LP  +  +
Sbjct: 797  SSLEKLPPSI-NANNLQQLSLINCSRVVELPAIENATNLQVLDLHNCSSLLELPPSIASA 855

Query: 480  KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNN 538
             +L  L+I  C + ++LP  IG++  L VL +   +++ E+P ++   S L   +   + 
Sbjct: 856  TNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSNCSSLVELPININLKSFLAVNLAGCSQ 915

Query: 539  LQIIPE--------SLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDLF 581
            L+  PE           ++S L  L+++N NNL  +P+  D L+        SL+ LD  
Sbjct: 916  LKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKSLERLDCC 975

Query: 582  ENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY 641
             NN    PE   +FP                  C KL+        +D  M  +    T 
Sbjct: 976  FNN----PEISLNFP-----------------KCFKLNQEA-----RDLIMHTTCINAT- 1008

Query: 642  ITKSMYFPGNEIPKWFRHQST-GSTISLK 669
                   PG ++P  F H++T G ++ +K
Sbjct: 1009 ------LPGTQVPACFNHRATSGDSLKIK 1031



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 21/233 (9%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L++ DC +   LP  +  L +L RL +   +++ ELP   G    L +L L+NCS 
Sbjct: 740 NLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSS 798

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE +  SI    +++ + + NCS +   P I     + + ++     VL L+ CS L  L
Sbjct: 799 LEKLPPSI-NANNLQQLSLINCSRVVELPAIE----NATNLQ-----VLDLHNCSSLLEL 848

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKL 461
           P S+    +L  L+I  C  L +LP  +G++  L+ L +   + + E+P ++   +   +
Sbjct: 849 PPSIASATNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSNCSSLVELPININLKSFLAV 908

Query: 462 KLKKCSSFESLP---SRLYVS-----KSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            L  CS  +S P   ++++         L  L I +C N + LP    +L YL
Sbjct: 909 NLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYL 961


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 18/321 (5%)

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           ++D  +   LPD +G+ Q+L  L  D   + ELP  +G L  L +L L   + L  + +S
Sbjct: 167 VLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTG-NRLRKLPTS 225

Query: 350 IFKLKSVESIEISN------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE--- 400
           I  + S+  + +         +++    E+    + G+ +E +P+SV  L++ ++L    
Sbjct: 226 IGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLAD 285

Query: 401 ----SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
                +P ++    SL  L +    +L  LP  LG L  L  L V    + ++P S   L
Sbjct: 286 NWLTHVPEAIGRLASLDKLSLT-YNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGL 344

Query: 457 A-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
           A L  L L + +   SLPS +   K LT L +  C +   LP  +G L  L+ L + G  
Sbjct: 345 ANLDTLNLAQ-NPLTSLPSSVGALKRLTWLSLAYC-DLETLPAGLGGLHRLETLDLVGNN 402

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +R++P  L  L +L  L L+ N L  +P +L  L +LV+L L++N L  +P  L  L SL
Sbjct: 403 LRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRALGGLESL 462

Query: 576 KYLDLFENNLDRIPEYLRSFP 596
           + LD+ EN L  IP  +   P
Sbjct: 463 RKLDVAENQLTWIPRSVCDLP 483



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 40/328 (12%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+ LG +  L RL +D     ELP  +  L  L +L L     L  +     +L+ + S
Sbjct: 62  LPETLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNG-LTTLPEEFARLERLTS 120

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
           + +   +     PE+         +  + S + L L K ++L  LP SL    SL +L +
Sbjct: 121 LWLDENA-FTALPEV---------VGHLSSLTQLYLQK-NQLPGLPDSLGA-PSLHTL-V 167

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKS------LAQLALSKLKLKKCSSFES 471
           +D   L  LPD +G+ ++L  L  +   + E+P S      L +L+L+  +L+K      
Sbjct: 168 LDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRK------ 221

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           LP+ +    SLT L  +       LP  IGNL  L+ L + G  + E+P S+  LS L  
Sbjct: 222 LPTSIGDMASLTKL-YLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTE 280

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
           L L+DN L  +PE++ +L+SL  L L+ N L  +P  L  L  L  LD+  N+L  +P+ 
Sbjct: 281 LNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDS 340

Query: 592 LRSFP------------TSIPSEFTSLR 607
                            TS+PS   +L+
Sbjct: 341 FDGLANLDTLNLAQNPLTSLPSSVGALK 368



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 146/310 (47%), Gaps = 44/310 (14%)

Query: 285 LTSLEIIDCP-NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           L++L +   P  F RLP ELG +  LN   + G  +  LPE LG++  L +L L +    
Sbjct: 28  LSNLGLTGLPAEFGRLP-ELGPVTFLN---LSGNRLATLPETLGEVTGLRRLWLDS---- 79

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEI-PFCNIDGSGIERIPSSVLKLNKCSKLESL 402
                                    GF E+ P   + G  +E      L L   + L +L
Sbjct: 80  ------------------------NGFGELPPQVALLGGLVE------LSLT-GNGLTTL 108

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           P      + LTSL  +D      LP+ +G+L +L +L ++   +  +P SL   +L  L 
Sbjct: 109 PEEFARLERLTSL-WLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLGAPSLHTLV 167

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           L   +    LP  +  ++SL +L   D      LP  IG L  L+ L++ G  +R++P S
Sbjct: 168 L-DGNHLAELPDWIGDTQSLVALS-ADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTS 225

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G ++SL  L L  N LQ +P S+  LS L +L LS N+LE +P  +  LS L  L+L +
Sbjct: 226 IGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLAD 285

Query: 583 NNLDRIPEYL 592
           N L  +PE +
Sbjct: 286 NWLTHVPEAI 295



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 16/300 (5%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           +D   F  LP ++  L  L  L + G  +  LPE   +L  L+ L L   +    +   +
Sbjct: 77  LDSNGFGELPPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENA-FTALPEVV 135

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             L S+  + +   + L G P       D  G   + + VL  N  ++   LP  +   +
Sbjct: 136 GHLSSLTQLYLQK-NQLPGLP-------DSLGAPSLHTLVLDGNHLAE---LPDWIGDTQ 184

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
           SL +L   D   L  LP  +G L  L+EL + G  +R++P S+  +A L+KL L+K +  
Sbjct: 185 SLVALS-ADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQK-NQL 242

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           ++LP+ +     L +L  +   +   LP  + +L  L  L +    +  VPE++G+L+SL
Sbjct: 243 QTLPASIGNLSELQTL-ALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRLASL 301

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L L+ N L  +P SL  L  L +L +S N+L  +P+  D L++L  L+L +N L  +P
Sbjct: 302 DKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLP 361



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 173/358 (48%), Gaps = 39/358 (10%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E   L+ L  L +D  A   LPE +G L+ L++L L+  ++L  +  S+    S+ +
Sbjct: 108 LPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQK-NQLPGLPDSL-GAPSLHT 165

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSV---LKLNKCS----KLESLPS 404
           + + + ++L   P+       +   + D + +  +P S+   ++L + S    +L  LP+
Sbjct: 166 L-VLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPT 224

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
           S+    SLT L  +   +L+ LP  +GNL  L+ L + G  + E+P S+A L+ L++L L
Sbjct: 225 SIGDMASLTKL-YLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNL 283

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +    +P  +    SL  L +        LP  +G L  L  L +   ++ ++P+S 
Sbjct: 284 AD-NWLTHVPEAIGRLASLDKLSLT-YNRLTELPPSLGALRVLTALDVSRNSLHDLPDSF 341

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             L++L+ L L+ N L  +P S+  L  L  L L+  +LE +P  L  L  L+ LDL  N
Sbjct: 342 DGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGN 401

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVD-----------LRNCLKLD--PNELSEIIK 628
           NL  +P  L           T+L L+ +           LRN + LD   NELS + +
Sbjct: 402 NLRDLPFQLSGL-----GALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPR 454



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 181/402 (45%), Gaps = 54/402 (13%)

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCH 181
           LTE   SI  L +L+ L L   + L  LPTSI     L +L L+  + L+ LP  + +  
Sbjct: 196 LTELPPSIGALIRLQELSLTGNR-LRKLPTSIGDMASLTKLYLQ-KNQLQTLPASIGNLS 253

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
              TL L G  +EELP+S+  LS + EL + +   L ++  +I +L  L+ + +      
Sbjct: 254 ELQTLALSGNHLEELPASVADLSRLTELNL-ADNWLTHVPEAIGRLASLDKLSL------ 306

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
                 + N                    R   LP      + LT+L++    +   LPD
Sbjct: 307 ------TYN--------------------RLTELPPSLGALRVLTALDVSRN-SLHDLPD 339

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
               L  L+ L +    +  LP  +G L  L+ L L  C +LE + + +  L  +E++++
Sbjct: 340 SFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYC-DLETLPAGLGGLHRLETLDL 398

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-KLESLPSSLCMFKSLTSLEIIDC 420
              +NL+   ++PF  + G G      ++  LN  S +L  +P +L + ++L +L++ D 
Sbjct: 399 VG-NNLR---DLPF-QLSGLG------ALTTLNLASNQLSWVPRTLGLLRNLVNLDLAD- 446

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            +L  LP  LG LE+L +L V    +  +P+S+  L   +  + + +    LP+  +   
Sbjct: 447 NELSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTSNWQKL 506

Query: 481 SLTSLEIIDCKNFMRLPD--EIGNLEYLKVLTIKGTAIREVP 520
           +L  L++ D      +P+  ++G +       + G     VP
Sbjct: 507 TLKELDLSDNPLLSAVPENWDVGTMALAADKALYGALGDRVP 548


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 172/364 (47%), Gaps = 59/364 (16%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
           E   N   FSKM +L+LL          +H+L    G  F    LR  +W  +P K+L  
Sbjct: 530 EADWNLQAFSKMCKLKLL---------YIHNLRLSLGPKFLPDALRILKWSWYPSKSLPP 580

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ++L  L +  S +T LW+ ++ L  LK IDL YS  LT+ PD +   NLE L L  
Sbjct: 581 GFQPDDLTILSLVHSNITHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEG 640

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C+SL + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+    
Sbjct: 641 CTSLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDISGCSKLKIIPEFVGQ 700

Query: 181 HLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
             R S L L G  +E+LPSSI                 E++S S+ +L  L  I I   P
Sbjct: 701 MKRLSKLYLGGPAVEKLPSSI-----------------EHLSESLVELD-LSGIVIREQP 742

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFE- 297
             +FL+    N+  +      S  L  +K P P   L +    F SL  L++ DC   E 
Sbjct: 743 YSRFLKQ---NLIAS------SFGLFPRKSPHPLIPLLASLKHFSSLKELKLNDCNLCEG 793

Query: 298 RLPDELGNLQALNRLIIDG--------------TAIRELPEGLGQLALLSKLELKNCSEL 343
            +P+++G+L +L  L + G              T +R   + L QL  L +  LK   E 
Sbjct: 794 EIPNDIGSLSSLRWLELGGNNFALTIARTSRSATFVRNNNQILAQLRQLLEYVLKRWIEF 853

Query: 344 EYIS 347
           E +S
Sbjct: 854 EVLS 857



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 156/356 (43%), Gaps = 70/356 (19%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S + ++ + I  L  ++SI++S   NL   P       D +GI  +   VL+   C+ L 
Sbjct: 595 SNITHLWNGIKYLGKLKSIDLSYSINLTRTP-------DFTGIPNLEKLVLE--GCTSLV 645

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-L 458
            +  S+ + K L      +CK ++ LP E+ N+E LE   + G + ++ +P+ + Q+  L
Sbjct: 646 KIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDISGCSKLKIIPEFVGQMKRL 704

Query: 459 SKLKLKKCSSFESLPSRL-YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           SKL L    + E LPS + ++S+SL  L++                         G  IR
Sbjct: 705 SKLYLG-GPAVEKLPSSIEHLSESLVELDL------------------------SGIVIR 739

Query: 518 EVPES--LGQ--LSSLEWLVLSDNNLQIIP--ESLNQLSSLVSLKLSNNNL--ERIPERL 569
           E P S  L Q  ++S   L    +   +IP   SL   SSL  LKL++ NL    IP  +
Sbjct: 740 EQPYSRFLKQNLIASSFGLFPRKSPHPLIPLLASLKHFSSLKELKLNDCNLCEGEIPNDI 799

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
             LSSL++L+L  NN       L    TS  + F      V   N +     +L E +  
Sbjct: 800 GSLSSLRWLELGGNNFA-----LTIARTSRSATF------VRNNNQILAQLRQLLEYVLK 848

Query: 630 GWMK-------------QSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            W++             Q  +  T        PG+EIP+WF +Q+  S +  + P+
Sbjct: 849 RWIEFEVLSRCDMMVRMQETHRRTLQPLEFVIPGSEIPEWFNNQNNPSAVPEEDPR 904


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 171/373 (45%), Gaps = 42/373 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF---TELRYFEWHQFPLKTL-NIL 62
           EIQ++   F KM  LR+L    +        + G PF     LR+ EW   PL ++ +  
Sbjct: 537 EIQLSADAFIKMKSLRILLIRNAH-------ITGGPFDLPNGLRWLEWPACPLLSMPSGF 589

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
               LV L M  S + +  ++ +N   LK IDL+  + LT  PD S   NLE L+LG CS
Sbjct: 590 CARKLVGLNMHRSYIREFGEEFKNYNLLKFIDLRDCEFLTGTPDFSAIPNLERLNLGGCS 649

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS-CH 181
            L E H S+  L KLE L  + C +L +LP++   + L+ L+L GC  L+  P++     
Sbjct: 650 KLVEVHQSVGNLAKLEFLSFEFCFNLKNLPSTFKLRSLRTLLLTGCQKLEAFPEIVGEIK 709

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               L L    I+ LPSSI  L+ +  L +  CK L  +   I+KL+ L+ + +  C  L
Sbjct: 710 WLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYKLEQLKCLFLEGCSML 769

Query: 242 QFLEMPSCNIDGTRSKEQPSSE-LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
              E P+ N +G  S   P    L L+ C  P+           +T L+  +C  F  L 
Sbjct: 770 H--EFPA-NPNGHSSLGFPKFRCLDLRNCNLPD-----------ITFLKEHNC--FPMLK 813

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           D          L + G     LP        L  L+L  C +++ I      +K VE+  
Sbjct: 814 D----------LDLSGNDFVSLPPYFHLFNNLRSLKLSKCMKVQEIPELPLYIKRVEA-- 861

Query: 361 ISNCSNLKGFPEI 373
             +C +L+ FP++
Sbjct: 862 -RDCESLERFPQL 873



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 29/366 (7%)

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSS--IFKLKSVESIEISNCSNLKGFPEIP 374
           + IRE  E      LL  ++L++C   E+++ +     + ++E + +  CS L       
Sbjct: 602 SYIREFGEEFKNYNLLKFIDLRDC---EFLTGTPDFSAIPNLERLNLGGCSKL------- 651

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
              +  S         L    C  L++LPS+    +SL +L +  C+KLE  P+ +G ++
Sbjct: 652 -VEVHQSVGNLAKLEFLSFEFCFNLKNLPSTF-KLRSLRTLLLTGCQKLEAFPEIVGEIK 709

Query: 435 ALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
            LE+L +  T I+ +P S+A L  L  L L  C +   LP  +Y  + L  L +  C   
Sbjct: 710 WLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYKLEQLKCLFLEGCSML 769

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIRE--VPE-----SLGQLSSLEWLVLSDNNLQIIPESL 546
              P        L     +   +R   +P+            L+ L LS N+   +P   
Sbjct: 770 HEFPANPNGHSSLGFPKFRCLDLRNCNLPDITFLKEHNCFPMLKDLDLSGNDFVSLPPYF 829

Query: 547 NQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
           +  ++L SLKLS    ++ IPE    +  ++  D    +L+R P+  R F  +       
Sbjct: 830 HLFNNLRSLKLSKCMKVQEIPELPLYIKRVEARDC--ESLERFPQLARIFKCNEEDRPNR 887

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGST 665
           L   +D  NC KL  NE S+ +++  + +    +  I   ++ PG+EIPKWF ++S   +
Sbjct: 888 LH-DIDFSNCHKLAANE-SKFLENAVLSKKFRQDLRI--EIFLPGSEIPKWFSYRSEEDS 943

Query: 666 ISLKTP 671
           +S + P
Sbjct: 944 LSFQLP 949



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 21/157 (13%)

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C   E  P+ +G ++ L +L +  TAI+ LP  +  L  L  L L  C  L Y+   I+K
Sbjct: 695 CQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYK 754

Query: 353 LKSVESIEISNCSNLKGFPEIP----------FCNIDGSGIERIPSSVLKLNKC------ 396
           L+ ++ + +  CS L  FP  P          F  +D         + LK + C      
Sbjct: 755 LEQLKCLFLEGCSMLHEFPANPNGHSSLGFPKFRCLDLRNCNLPDITFLKEHNCFPMLKD 814

Query: 397 -----SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                +   SLP    +F +L SL++  C K++ +P+
Sbjct: 815 LDLSGNDFVSLPPYFHLFNNLRSLKLSKCMKVQEIPE 851


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 44/369 (11%)

Query: 4   INSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NIL 62
           I  E+ I+   F  M  L+ L+  G  N   +         +LR   W  FP+  L + +
Sbjct: 509 IGEELNISERAFEGMCNLQFLRIDGDCNTLQLSQGLNYFSRKLRILHWSYFPMACLPSNV 568

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           + E LV L M  SK+ +LW+ ++ L +LKR+D++ S  L +LPD S A NL+ L+L YCS
Sbjct: 569 NLEFLVELIMDNSKLEKLWEGIKPLRNLKRMDMRDSANLKELPDFSTATNLQKLNLSYCS 628

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH-SKYLKRLVLRGCSNLKNLPKMTSCH 181
           SL +  SSI     L+ L+L RC ++   P+ I  +  L+ L L  CSNL          
Sbjct: 629 SLIKLPSSIGNATNLKKLNLRRCSNIMEFPSFIEKATNLEILDLSSCSNLV--------- 679

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                        ELP  IK L  + +L +  C +L+ + ++I  L+ L  + +  C  L
Sbjct: 680 -------------ELPLFIKNLQKLQKLRLGGCSKLQVLPTNI-NLESLVELDLTDCSAL 725

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           +     S N+            LKL +    E +P     +  L  L +    N + LP 
Sbjct: 726 KLFPEISTNV----------RVLKLSETA-IEEVPPSIAFWPRLDELHMSYFENLKELPH 774

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI-----SSSIFKLKSV 356
            L    ++  L +  T I+E+P  + +++ L +L LK C +LE +     S SI   +  
Sbjct: 775 ALC---SITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIPESLSIIDAEDC 831

Query: 357 ESIEISNCS 365
           ES+E  +CS
Sbjct: 832 ESLERLDCS 840



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 178/397 (44%), Gaps = 87/397 (21%)

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           NL+ L  LI+D + + +L EG+  L  L ++++++ + L+            E  + S  
Sbjct: 569 NLEFLVELIMDNSKLEKLWEGIKPLRNLKRMDMRDSANLK------------ELPDFSTA 616

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLE 416
           +NL+    + +C    S + ++PSS+        L L +CS +   PS     +  T+LE
Sbjct: 617 TNLQKL-NLSYC----SSLIKLPSSIGNATNLKKLNLRRCSNIMEFPS---FIEKATNLE 668

Query: 417 IID---CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
           I+D   C  L  LP  + NL+ L++LR+ G                      CS  + LP
Sbjct: 669 ILDLSSCSNLVELPLFIKNLQKLQKLRLGG----------------------CSKLQVLP 706

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           + + + +SL  L++ DC      P+   N+   +VL +  TAI EVP S+     L+ L 
Sbjct: 707 TNINL-ESLVELDLTDCSALKLFPEISTNV---RVLKLSETAIEEVPPSIAFWPRLDELH 762

Query: 534 LSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRI 588
           +S   NL+ +P +L    S+  L LS+  ++ +P  +  +S L  L L       +L +I
Sbjct: 763 MSYFENLKELPHAL---CSITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQI 819

Query: 589 PEYLRSFPTS-------IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY 641
           PE L             +   F + ++ +    C KL+      II           +T 
Sbjct: 820 PESLSIIDAEDCESLERLDCSFHNPKICLKFAKCFKLNQEAKDLII-----------QTP 868

Query: 642 ITKSMYFPGNEIPKWFRHQST-GSTISLK---TPQPT 674
            ++    PG E+P +F H+ST G ++++K    P PT
Sbjct: 869 TSEHAILPGGEVPSYFTHRSTSGGSLTIKLNEKPLPT 905


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 150/339 (44%), Gaps = 47/339 (13%)

Query: 16  SKMTELRLLKFCGSKNKCMVHSLEGVPF---TELRYFEWHQFPLKTL-NILHWENLVSLK 71
           SK+  L+LL  C  KN        G P      L Y  W+ FP  +L + +   +LV L 
Sbjct: 540 SKLGHLKLLILC-HKN------FSGEPIFLSNSLCYLSWNGFPFDSLPSNIQLHDLVELN 592

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
           MP S + QLW+ +Q L  LKR+DL  SK L   P     QNLE +D   C +L + H S+
Sbjct: 593 MPDSNIKQLWEGIQRLPCLKRMDLSNSKNLRTTPSFEGIQNLERIDFTGCINLLQVHPSV 652

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR--GCSNLKNLPKMTSCHLRSTLPLL 189
             L +L  L L  C +LT L     S+     VLR  GC  L+N P  T   + + L  L
Sbjct: 653 GLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRVLRLSGCIGLRNTPDFT---VAANLEYL 709

Query: 190 G----VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                + + ++  SI  L+ +  L +  C +L  IS+    +  L ++ +  C N   L 
Sbjct: 710 DMERCINLSKIDKSIGTLTKLRFLSLRHCTKLFPISNIFDNMTSLTTLDLCECWNFTTLP 769

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
           +P+                     P P          +SL  L++  C N   LPD +G 
Sbjct: 770 LPTT-----------------VNSPSP---------LESLIFLDLSFC-NISVLPDSIGK 802

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L++L RL + G     LP    +LA L+ L L +C  L+
Sbjct: 803 LKSLERLNLQGNHFTTLPSTFKRLANLAYLNLSHCHRLK 841



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 182/429 (42%), Gaps = 77/429 (17%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           F+ LP  +  L  L  L +  + I++L EG+ +L  L +++L N   L   + S   +++
Sbjct: 576 FDSLPSNI-QLHDLVELNMPDSNIKQLWEGIQRLPCLKRMDLSNSKNLR-TTPSFEGIQN 633

Query: 356 VESIEISNCSNL-KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP-SSLCMFKSLT 413
           +E I+ + C NL +  P +      G   E +    L L  C+ L  L   S+    SL 
Sbjct: 634 LERIDFTGCINLLQVHPSV------GLLTELV---FLSLQNCTNLTCLDFGSVSRVWSLR 684

Query: 414 SLEIIDCKKLERLPD--ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
            L +  C  L   PD     NLE L+  R     + ++ KS+  L  L  L L+ C+   
Sbjct: 685 VLRLSGCIGLRNTPDFTVAANLEYLDMERC--INLSKIDKSIGTLTKLRFLSLRHCTKLF 742

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
            + +      SLT+L++ +C NF  LP                     +P ++   S LE
Sbjct: 743 PISNIFDNMTSLTTLDLCECWNFTTLP---------------------LPTTVNSPSPLE 781

Query: 531 WLVLSD---NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLD 586
            L+  D    N+ ++P+S+ +L SL  L L  N+   +P     L++L YL+L   + L 
Sbjct: 782 SLIFLDLSFCNISVLPDSIGKLKSLERLNLQGNHFTTLPSTFKRLANLAYLNLSHCHRLK 841

Query: 587 RIPEYLRSFPT------SIPSEFTSLRLSVDLR------NCLKLDPNELS---EIIKDGW 631
           R+P+     PT      S+   F +   S D R      +C KL     S     +   W
Sbjct: 842 RLPK----LPTKSGQSDSVGRYFKTTSGSRDHRSGLYIYDCPKLTKRLFSCEDPGVPFKW 897

Query: 632 MKQSVNGETYI-----------TKSMYFPGNE-IPKWFRHQ-STGSTISLKTPQPTGYNK 678
           +K+      +             K +   GN  IP+WF ++   GS I++K      +  
Sbjct: 898 LKRLFKEPRHFRCGFDIVLPLHRKHIDLHGNPLIPQWFDYKFEKGSIITIKNSNM--HVD 955

Query: 679 LMGFAFCVV 687
            +GFAFCV 
Sbjct: 956 WVGFAFCVA 964



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 94/238 (39%), Gaps = 52/238 (21%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMP 73
           +F  +  L  + F G  N   VH   G+  TEL +          L++ +  NL  L   
Sbjct: 627 SFEGIQNLERIDFTGCINLLQVHPSVGL-LTELVF----------LSLQNCTNLTCLDF- 674

Query: 74  GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
              V+++W       SL+ + L     L   PD ++A NLE LD+  C +L++   SI  
Sbjct: 675 -GSVSRVW-------SLRVLRLSGCIGLRNTPDFTVAANLEYLDMERCINLSKIDKSIGT 726

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS------------- 179
           L KL  L L  C  L  +     +   L  L L  C N   LP  T+             
Sbjct: 727 LTKLRFLSLRHCTKLFPISNIFDNMTSLTTLDLCECWNFTTLPLPTTVNSPSPLESLIFL 786

Query: 180 ----CHLRSTLP-------------LLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
               C++ S LP             L G     LPS+ K L+N+  L +  C RL+ +
Sbjct: 787 DLSFCNI-SVLPDSIGKLKSLERLNLQGNHFTTLPSTFKRLANLAYLNLSHCHRLKRL 843


>gi|168032879|ref|XP_001768945.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679857|gb|EDQ66299.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 323

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 152/290 (52%), Gaps = 15/290 (5%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALL 332
           SLP+      SLT+ +I  C +   LP+ELG L +L    + G +++  LP  LG L  L
Sbjct: 40  SLPNEFGNLTSLTTFDIQWCSSLTSLPNELGKLTSLTTFDLSGWSSLTSLPNELGNLTSL 99

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVL 391
           + L ++ CS L  + + +  L S+ ++    CS+L   P           +  + S +++
Sbjct: 100 TTLNMEYCSSLTSLPNELGNLTSLTTLNKECCSSLTLLPN---------ELGNLTSLTII 150

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
            +  CS L SLP+ L    SLT+L I     L  LP+EL NL +L  + ++  + +  +P
Sbjct: 151 DIGWCSSLTSLPNELDNLTSLTNLNIQWYSSLVSLPNELDNLTSLTTINIQWCSSLTSLP 210

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
                L +L+ L++ +CSS  SLP+ L    SLT+ +I  C +   LP+E+GNL  L  L
Sbjct: 211 NESGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTL 270

Query: 510 TIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL 557
            I+  +++  +P   G L SL  L +++ ++L  +P  L+ L+SL +  +
Sbjct: 271 NIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNVLDNLTSLTTFDI 320



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 165/358 (46%), Gaps = 39/358 (10%)

Query: 136 KLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
            L   D+  C SLTSLP                + L NL  +T+  L          +  
Sbjct: 2   SLTTFDIQWCSSLTSLP----------------NELGNLTSLTTFDLSG-----WSSLTS 40

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP+    L+++    I  C  L ++ + + KL  L +  +    +L  L     N+    
Sbjct: 41  LPNEFGNLTSLTTFDIQWCSSLTSLPNELGKLTSLTTFDLSGWSSLTSLPNELGNLTSLT 100

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
           +       L ++ C    SLP+      SLT+L    C +   LP+ELGNL +L  + I 
Sbjct: 101 T-------LNMEYCSSLTSLPNELGNLTSLTTLNKECCSSLTLLPNELGNLTSLTIIDIG 153

Query: 316 G-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             +++  LP  L  L  L+ L ++  S L  + + +  L S+ +I I  CS+L   P   
Sbjct: 154 WCSSLTSLPNELDNLTSLTNLNIQWYSSLVSLPNELDNLTSLTTINIQWCSSLTSLP--- 210

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
               + SG   I  + L++N+CS L SLP+ L    SLT+ +I  C  L  LP+ELGNL 
Sbjct: 211 ----NESG-NLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLT 265

Query: 435 ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           +L  L ++  + +  +P     L +L+ L++ +CSS  SLP+ L    SLT+ +I  C
Sbjct: 266 SLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNVLDNLTSLTTFDIGRC 323



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 20/308 (6%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++ NL SL   DL     LT LP+      +L   D+ +CSSLT   + +  
Sbjct: 12  SSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELGK 71

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L   DL    SLTSLP  + +   L  L +  CS+L +LP      L +   L  + 
Sbjct: 72  LTSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPN----ELGNLTSLTTLN 127

Query: 193 IE------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            E       LP+ +  L+++  + I  C  L ++ + +  L  L ++ I    +L  + +
Sbjct: 128 KECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLNIQWYSSL--VSL 185

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           P+  +D   S     + + ++ C    SLP+      SLT+L + +C +   LP+ELGNL
Sbjct: 186 PN-ELDNLTSL----TTINIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNELGNL 240

Query: 307 QALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
            +L    I G  ++  LP  LG L  L+ L ++ CS L  + +    L S+ ++ ++ CS
Sbjct: 241 TSLTTFDIQGCLSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECS 300

Query: 366 NLKGFPEI 373
           +L   P +
Sbjct: 301 SLTSLPNV 308



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 32/293 (10%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S +T L +++  L SL   DL     LT LP+ L    +L  L++ YCSSLT   + +  
Sbjct: 60  SSLTSLPNELGKLTSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGN 119

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
           L  L  L+ + C SLT LP  + +   L  + +  CS+L +LP      L +   L  + 
Sbjct: 120 LTSLTTLNKECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPN----ELDNLTSLTNLN 175

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           I+   S           L+     L+N++S       L +I I  C +L  L   S N+ 
Sbjct: 176 IQWYSS-----------LVSLPNELDNLTS-------LTTINIQWCSSLTSLPNESGNLI 217

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
              +       L++ +C    SLP+      SLT+ +I  C +   LP+ELGNL +L  L
Sbjct: 218 SLTT-------LRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTL 270

Query: 313 IIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            I   +++  LP   G L  L+ L +  CS L  + + +  L S+ + +I  C
Sbjct: 271 NIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNVLDNLTSLTTFDIGRC 323



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 23/230 (10%)

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCS 467
            SLT+ +I  C  L  LP+ELGNL +L    + G + +  +P     L +L+   ++ CS
Sbjct: 1   TSLTTFDIQWCSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFDIQWCS 60

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-GTAIREVPESLGQL 526
           S  SLP+ L    SLT+ ++    +   LP+E+GNL  L  L ++  +++  +P  LG L
Sbjct: 61  SLTSLPNELGKLTSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNL 120

Query: 527 SSLEWLVLSD---NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
           +SL    L+    ++L ++P  L  L+SL  + +   ++L  +P  LD L+SL  L++  
Sbjct: 121 TSLT--TLNKECCSSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLNI-- 176

Query: 583 NNLDRIPEYLRSFPTSIPSEFTSLR--LSVDLRNCLKLD--PNELSEIIK 628
                  ++  S   S+P+E  +L    +++++ C  L   PNE   +I 
Sbjct: 177 -------QWYSSL-VSLPNELDNLTSLTTINIQWCSSLTSLPNESGNLIS 218


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 179/353 (50%), Gaps = 35/353 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L RL +   ++  LP+ +GQL  L +L+L + + L  +   + +L++++ 
Sbjct: 63  LPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQR 121

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPS 404
           + + N   L   P+       +   ++  + +  +P  V +L    +L+       +LP 
Sbjct: 122 LNL-NSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 180

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   K+L  L++ +  KL  LP E+  L  L+EL +    +  +PK + QL  L  L L
Sbjct: 181 EIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNL 239

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +   +LP  +   ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +
Sbjct: 240 I-VTQLTTLPKEIGELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEI 297

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL +L+WL L  N L  +P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN
Sbjct: 298 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 357

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
            L           T++P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 358 QL-----------TTLPKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 395



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 163/323 (50%), Gaps = 29/323 (8%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L +   ++  LP+ +GQL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EI-PFCNIDGSGIERIP 387
             L +L+L + + L  +   I +LK+++ +++ N + L   P EI    N+    + R  
Sbjct: 163 ENLQRLDL-HQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHR-- 218

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
                    ++L +LP  +   ++L +L +I   +L  LP E+G L+ L+ L +    + 
Sbjct: 219 ---------NQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQLT 268

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
            +PK + +L   ++ + + +   +LP  +   ++L  L++        LP EIG L+ L+
Sbjct: 269 TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTTLPKEIGQLQNLQ 327

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L +    +  +P+ +GQL +L+ L L +N L  +P+ + QL +L  L L NN L  +P+
Sbjct: 328 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 387

Query: 568 RLDPLSSLKYLDLFENNLDRIPE 590
            +  L SL+ L L  N L  +P+
Sbjct: 388 EVLRLQSLQVLALGSNRLSTLPK 410



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 236/511 (46%), Gaps = 81/511 (15%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           T L   +QN + ++ +DL+Y KL T LP ++   QNL+ LDL + +SLT     I  L  
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKL-TILPKEIGQLQNLQRLDLSF-NSLTILPKEIGQLRN 95

Query: 137 LEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEE 195
           L+ LDL    SLT+LP  +   + L+RL L       N  K+T+                
Sbjct: 96  LQELDLS-FNSLTTLPKEVGQLENLQRLNL-------NSQKLTT---------------- 131

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP  I  L N+ EL + S   L  +   + +L+ L+ + +H+                  
Sbjct: 132 LPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLDLHQN----------------- 173

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
                          R  +LP      K+L  L++ +      LP E+  L+ L  L + 
Sbjct: 174 ---------------RLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLH 217

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
              +  LP+ +GQL  L  L L   ++L  +   I +L++++++ + + + L   P+   
Sbjct: 218 RNQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPK--- 272

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
              +   ++ +   VL+ N+ +   +LP  +   ++L  L++    +L  LP E+G L+ 
Sbjct: 273 ---EIGELQNLEILVLRENRIT---ALPKEIGQLQNLQWLDL-HQNQLTTLPKEIGQLQN 325

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN-- 492
           L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L ++D  N  
Sbjct: 326 LQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRVLDLDNNQ 381

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
              LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ + QL +L
Sbjct: 382 LTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNL 441

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             L L  N L   P+ +  L +L+ L L+ N
Sbjct: 442 QELCLDENQLTTFPKEIRQLKNLQELHLYLN 472



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 201/429 (46%), Gaps = 60/429 (13%)

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTET 127
           +L +   K+T L  ++  L +L+R+DL ++  LT LP ++   +NL+ LDL + +SLT  
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNS-LTILPKEIGQLRNLQELDLSF-NSLTTL 109

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRST 185
              +  L  L+ L+L+  K LT+LP  I   + L+ L L   ++L  LPK +        
Sbjct: 110 PKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQR 167

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR-----CPN 240
           L L    +  LP  I  L N+ EL + S K L  +   I +L+ L+ + +HR      P 
Sbjct: 168 LDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDLHRNQLTTLPK 226

Query: 241 L--QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL--EIIDCPNF 296
              Q   + + N+  T+    P      K+    ++L +   +   LT+L  EI +  N 
Sbjct: 227 EIGQLQNLKTLNLIVTQLTTLP------KEIGELQNLKTLNLLDNQLTTLPKEIGELQNL 280

Query: 297 E----------RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           E           LP E+G LQ L  L +    +  LP+ +GQL  L +L+L + ++L  +
Sbjct: 281 EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDL-HQNQLTTL 339

Query: 347 SSSIFKLKSVESI------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
              I +L++++ +            EI    NL+        ++D + +  +P  VL+L 
Sbjct: 340 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLR------VLDLDNNQLTTLPKEVLRLQ 393

Query: 395 KC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
                    ++L +LP  +   ++L  L +I   +L  LP E+G L+ L+EL ++   + 
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLI-SNQLTTLPKEIGQLQNLQELCLDENQLT 452

Query: 448 EVPKSLAQL 456
             PK + QL
Sbjct: 453 TFPKEIRQL 461



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L LS N+L I+P+ + QL +L  L LS N+L  +
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
           P+ +  L +L+ L+L    L           T++P E   LR
Sbjct: 110 PKEVGQLENLQRLNLNSQKL-----------TTLPKEIGQLR 140


>gi|108740374|gb|ABG01543.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 197/407 (48%), Gaps = 59/407 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL  LP                       SI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRHCSNLVELP-----------------------SIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL++Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELVLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +  +LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--- 379
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPEI   N+    
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEIS-TNVRALY 274

Query: 380 --GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
             G+ IE +P S+        L ++    L   P  L +  +L    ++  K L+ +P  
Sbjct: 275 LCGTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNL----VLSDKDLQEVPPL 330

Query: 430 LGNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
           +  +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 331 IKRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 189/430 (43%), Gaps = 76/430 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L+ L  +DL    +L  LP    +  L++L L GCS+L                
Sbjct: 4   YLSVQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+ + +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       EL L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------ELVLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+   N+ AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
            + D                          ++EVP  + ++S L+ L+L       +L  
Sbjct: 318 VLSD------------------------KDLQEVPPLIKRISRLQTLILKGYRKVVSLPQ 353

Query: 542 IPESLNQLSS 551
           IP+SL  + +
Sbjct: 354 IPDSLKWIDA 363


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 165/324 (50%), Gaps = 20/324 (6%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            ++ T + I+   N E LP E+G LQ L +L +    ++ LP+ +G+L  L  L L N +
Sbjct: 38  LRNATDVRILSLHNNETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNN-N 96

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
           +L  I + I +LK ++ + + N + L+  P+       +    ++ + ++ +P  +  L 
Sbjct: 97  QLTTIPNEIGELKKLQVLYLDN-NQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQ 155

Query: 395 KCSKLES-------LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
           K  +L+S       LP  +   K+L  L I+   +L  LP E+G L+ L+ L +    + 
Sbjct: 156 KLRELDSTNNPLTTLPKEIGYLKNLEEL-ILSNNELTTLPKEIGKLKNLQVLYLGADLLT 214

Query: 448 EVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            +P  +  L  L KL L       +LP+ +   K+L  L + D +    LP++IG L+ L
Sbjct: 215 TLPNDIGYLKNLQKLYLN-TGRLTTLPNDIGYLKNLQELYLSDNQ-LKTLPNDIGKLKNL 272

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           +VL + G  +  +P+  G+L SL  L LS N L  +P+   +L SL  L LS N L  +P
Sbjct: 273 QVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLP 332

Query: 567 ERLDPLSSLKYLDLFENNLDRIPE 590
           + +  L SL+ L+L  N L  +P+
Sbjct: 333 KEIGKLQSLRELNLSGNQLTTLPK 356



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 23/303 (7%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ++LP      K L  L  ++      +P+E+G L+ L  L +D   ++ LP+ +G+L  L
Sbjct: 76  QALPKEIGKLKKLQVL-TLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKL 134

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISN---------CSNLKGFPEIPFCNIDGSGI 383
             L L N ++L+ +   I  L+ +  ++ +N            LK   E+   N   + +
Sbjct: 135 QVLYL-NDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEELILSN---NEL 190

Query: 384 ERIPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             +P  + KL            L +LP+ +   K+L  L  ++  +L  LP+++G L+ L
Sbjct: 191 TTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKL-YLNTGRLTTLPNDIGYLKNL 249

Query: 437 EELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           +EL +    ++ +P  + +L   ++     +   +LP      +SL  L +        L
Sbjct: 250 QELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNL-SGNQLTTL 308

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
           P E G L+ L+ L + G  +  +P+ +G+L SL  L LS N L  +P+ +  L +L  L 
Sbjct: 309 PKEFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQLTTLPKEIGHLKNLQELY 368

Query: 557 LSN 559
           L +
Sbjct: 369 LDD 371



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 15/162 (9%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           LS+LK ++  ++ +L   L   ++ T + I+   N   LP EIG L+ L  L +    ++
Sbjct: 20  LSQLKAQEIGTYHNLTEAL---RNATDVRILSLHNNETLPKEIGELQNLTKLYLSNNQLQ 76

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +P+ +G+L  L+ L L++N L  IP  + +L  L  L L NN L+ +P+ +  L  L+ 
Sbjct: 77  ALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQV 136

Query: 578 LDLFENNLDRIP---EYLRSFP---------TSIPSEFTSLR 607
           L L +N L  +P   EYL+            T++P E   L+
Sbjct: 137 LYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLK 178


>gi|215261581|gb|ACJ64861.1| disease resistance protein RPP1-like protein R7 [Arabidopsis
           thaliana]
          Length = 1135

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 169/381 (44%), Gaps = 74/381 (19%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           DD   L +LK +DL YS  L +LP+LS A NLE L L  CSSL E  SSI+ L  L++LD
Sbjct: 640 DDTTQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLISLQILD 699

Query: 142 LDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP-----------KMTSCHLRSTLPLLG 190
           L  C SL  LP+  ++  LK+L L  CS+L  LP            + +C     LP + 
Sbjct: 700 LQDCSSLVELPSFGNTTKLKKLDLGNCSSLVKLPPSINANNLQELSLINCSRVVELPAIE 759

Query: 191 VGIE-------------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
              +             ELP SI   +N+  L I  C  L  + SSI  +  LE   +  
Sbjct: 760 NATKLRELELQNCSSLIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSN 819

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C NL  +E+PS     +    Q    L++  C + E+LP+   +  SL  L + DC   +
Sbjct: 820 CSNL--VELPS-----SIGNLQKLYMLRMCGCSKLETLPTNINLI-SLRILNLTDCSQLK 871

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
             P+   ++  L    ++GTAI+E+P           L + + S L     S F+     
Sbjct: 872 SFPEISTHISELR---LNGTAIKEVP-----------LSITSWSRLAVYEMSYFE----- 912

Query: 358 SIEISNCSNLKGFPEIPFCNID----GSGIERIPSSV--------LKLNKCSKLESLPSS 405
                   +LK FP       D       I+ +P  V        L+LN C+ L SLP  
Sbjct: 913 --------SLKEFPYALDIITDLLLVSEDIQEVPPRVKRMSRLRDLRLNNCNNLVSLPQ- 963

Query: 406 LCMFKSLTSLEIIDCKKLERL 426
             +  SL  +   +CK LERL
Sbjct: 964 --LSNSLAYIYADNCKSLERL 982



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 207/446 (46%), Gaps = 52/446 (11%)

Query: 284  SLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +L  L++ +C +   LP  +  L +L  L + D +++ ELP   G    L KL+L NCS 
Sbjct: 670  NLEELKLRNCSSLVELPSSIEKLISLQILDLQDCSSLVELP-SFGNTTKLKKLDLGNCSS 728

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
            L  +  SI    +++ + + NCS +   P I     + + +       L+L  CS L  L
Sbjct: 729  LVKLPPSI-NANNLQELSLINCSRVVELPAIE----NATKLRE-----LELQNCSSLIEL 778

Query: 403  PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSK 460
            P S+    +L  L+I  C  L +LP  +G++ +LE   +   + + E+P S+  L  L  
Sbjct: 779  PLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLQKLYM 838

Query: 461  LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
            L++  CS  E+LP+ + +  SL  L + DC      P EI    ++  L + GTAI+EVP
Sbjct: 839  LRMCGCSKLETLPTNINLI-SLRILNLTDCSQLKSFP-EIST--HISELRLNGTAIKEVP 894

Query: 521  ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
             S+   S L    +S   +L+  P +L+ ++ L+   L + +++ +P R+  +S L+ L 
Sbjct: 895  LSITSWSRLAVYEMSYFESLKEFPYALDIITDLL---LVSEDIQEVPPRVKRMSRLRDLR 951

Query: 580  LFE-NNLDRIPEYLRSFPTSIPSE----------FTSLRLSVDLRNCLKLDPNELSEIIK 628
            L   NNL  +P+   S                  F +  +S+   NC KL+  E  ++I 
Sbjct: 952  LNNCNNLVSLPQLSNSLAYIYADNCKSLERLDCCFNNPEISLYFPNCFKLN-QEARDLIM 1010

Query: 629  DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST-GSTISLKTPQPTGYNKLMGFAFCVV 687
                       T   K    PG ++P  F H++T G ++ +K  + +     + F  C++
Sbjct: 1011 ----------HTSTRKCAMLPGTQVPPCFNHRATSGDSLKIKLKE-SSLRTTLRFKACIM 1059

Query: 688  VACSVSECCRHESVEDDRKCNLFDVV 713
            +         +E +  DRK    D+V
Sbjct: 1060 LVKG------NEEMRYDRKSMSVDIV 1079



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 56/387 (14%)

Query: 149 TSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG----IEELPSSIKCLS 204
           TS    +H  Y K  +L G  ++  +    +  LR+ L  + +     ++ELP+ +   +
Sbjct: 612 TSRKQFVHHGYRKHQLLVGERDICEVLDDDTTQLRN-LKWMDLSYSSYLKELPN-LSTAT 669

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSEL 264
           N+ EL + +C  L  + SSI KL  L+ + +  C +L  +E+PS    G  +K +   +L
Sbjct: 670 NLEELKLRNCSSLVELPSSIEKLISLQILDLQDCSSL--VELPSF---GNTTKLK---KL 721

Query: 265 KLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELP 323
            L  C     LP       +L  L +I+C     LP  + N   L  L +   +++ ELP
Sbjct: 722 DLGNCSSLVKLPPS-INANNLQELSLINCSRVVELP-AIENATKLRELELQNCSSLIELP 779

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +G    L  L++  CS L  + SSI  + S+E  ++SNCSNL   P         S I
Sbjct: 780 LSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELP---------SSI 830

Query: 384 ERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
             +    +L++  CSKLE+LP+++ +  SL  L + DC +L+  P+   ++    ELR+ 
Sbjct: 831 GNLQKLYMLRMCGCSKLETLPTNINLI-SLRILNLTDCSQLKSFPEISTHIS---ELRLN 886

Query: 443 GTGIREVPKSLAQLALSKLKLKKCSSFESL-----------------------PSRLYVS 479
           GT I+EVP S+   + S+L + + S FESL                       P R+   
Sbjct: 887 GTAIKEVPLSIT--SWSRLAVYEMSYFESLKEFPYALDIITDLLLVSEDIQEVPPRVKRM 944

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             L  L + +C N + LP    +L Y+
Sbjct: 945 SRLRDLRLNNCNNLVSLPQLSNSLAYI 971



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 45/287 (15%)

Query: 297 ERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           E L D+   L+ L  + +  ++ ++ELP  L     L +L+L+NCS L  + SSI KL S
Sbjct: 636 EVLDDDTTQLRNLKWMDLSYSSYLKELP-NLSTATNLEELKLRNCSSLVELPSSIEKLIS 694

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++ +++ +CS+L   P   F N   + +++     L L  CS L  LP S+    +L  L
Sbjct: 695 LQILDLQDCSSLVELPS--FGNT--TKLKK-----LDLGNCSSLVKLPPSINA-NNLQEL 744

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
            +I+C ++  LP       A+E      T +RE            L+L+ CSS   LP  
Sbjct: 745 SLINCSRVVELP-------AIEN----ATKLRE------------LELQNCSSLIELPLS 781

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVL 534
           +  + +L  L+I  C + ++LP  IG++  L+   +   + + E+P S+G L  L  L +
Sbjct: 782 IGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLQKLYMLRM 841

Query: 535 SD-NNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLK 576
              + L+ +P ++N    L+SL++ N    + L+  PE    +S L+
Sbjct: 842 CGCSKLETLPTNIN----LISLRILNLTDCSQLKSFPEISTHISELR 884


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 185/378 (48%), Gaps = 31/378 (8%)

Query: 284 SLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
           +L  LE +   N   E LP+++G L+ L  L ++   +  L + +G L  L  L LKN +
Sbjct: 82  TLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKN-N 140

Query: 342 ELEYISSSIFKLKSVESIEISN------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
            LE + + I KL+ +E + + +         +    ++ + ++  + +E +P+ + KL K
Sbjct: 141 RLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRK 200

Query: 396 CSKLESLPSSLC-MFKSLTSLEIIDCKKLER-----LPDELGNLEALEELRVEGTGIREV 449
              L    + L  + + + +L+ ++   LE      LP E+G L+ LE L ++   +  +
Sbjct: 201 LEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSL 260

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P+ +  L   +      +  ++LP  ++  ++L  L + D + F  LP EI  L+ L+ L
Sbjct: 261 PQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQ-FRTLPKEIDQLQNLEGL 319

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +    +  +P  + +L +L+WL L DN L ++P+ + QL +L SL LSNN L  +P+ +
Sbjct: 320 DVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEI 379

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDL---RN 614
             L  L+YL+L  N L  +P+ + +               ++P E   L+   DL    N
Sbjct: 380 GTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNN 439

Query: 615 CLKLDPNELSEIIKDGWM 632
            LK  P E+ ++ K  W+
Sbjct: 440 RLKTLPKEIWKLRKLEWL 457



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 213/470 (45%), Gaps = 66/470 (14%)

Query: 209 LLIYSCKRLENISSSIFKLQFLE---------SIRIHRCPNLQFLEMPSCNIDGTRSKEQ 259
           +L  S  +L  + + I KL+ LE         S+ +     LQ LE  S  +   R +  
Sbjct: 42  ILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLS--LKNNRLESL 99

Query: 260 PSSELKLKKCPRPESLPSGQCM-----FKSLTSLEIIDCPN--FERLPDELGNLQALNRL 312
           P+   KL+K     +L + Q         +L  LE +   N   E LP+++G L+ L  L
Sbjct: 100 PNKIGKLRKLEHL-NLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHL 158

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN------CSN 366
            ++   +  L + +G L  L  L LKN + LE + + I KL+ +E + + +         
Sbjct: 159 NLEHNQLAVLVQEIGTLQKLEWLSLKN-NRLESLPNKIGKLRKLEHLNLEHNQLAVLVQE 217

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIID 419
           +    ++ + +++ + +  +P  + KL K        +KL SLP  +   + L  L +++
Sbjct: 218 IGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVN 277

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA------------------LSKL 461
             +L+ LP E+  L+ L++L +     R +PK + QL                   + KL
Sbjct: 278 -NRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKL 336

Query: 462 KLKKC-----SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
           +  K      +    LP  +   ++L SL I+       LP EIG L+ L+ L +    +
Sbjct: 337 QNLKWLYLDDNQLTVLPQEIGQLENLESL-ILSNNQLTTLPQEIGTLQKLQYLNLSNNQL 395

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
           R +P+ +G L  LEWL L  N L  +P+ ++QL +L  L LSNN L+ +P+ +  L  L+
Sbjct: 396 RTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLE 455

Query: 577 YLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           +L L  N L  +P+ +             L LS    N L+  PNE+ ++
Sbjct: 456 WLYLKNNKLGSLPKEIDQL-----QNLEYLDLS---NNQLRTLPNEIGQL 497



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 238/524 (45%), Gaps = 74/524 (14%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           D ++N ++++ +DL  ++L T   ++   +NLE L+L   + L+     I  L KLE L 
Sbjct: 32  DALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNL-VNNQLSVLVQEIGTLQKLEWLS 90

Query: 142 LDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIK 201
           L +   L SLP  I                  L K+   +L +    L V ++E+ +  K
Sbjct: 91  L-KNNRLESLPNKIGK----------------LRKLEHLNLENNQ--LAVLVQEIGTLQK 131

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLE---------SIRIHRCPNLQFLEMPSCNID 252
                 E L     RLE++ + I KL+ LE         ++ +     LQ LE  S  + 
Sbjct: 132 L-----EWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLS--LK 184

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQ--CMFKSLTSLEIIDCPNFER-----LPDELGN 305
             R +  P+   KL+K     +L   Q   + + + +L+ ++  + E      LP E+G 
Sbjct: 185 NNRLESLPNKIGKLRKLEHL-NLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGK 243

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI------ 359
           LQ L  L +    +  LP+ +G L  L  L L N + L+ +   I+KL++++ +      
Sbjct: 244 LQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVN-NRLKTLPREIWKLQNLKDLYLGDNQ 302

Query: 360 ------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSL 406
                 EI    NL+G       ++  + +  +P+ + KL          ++L  LP  +
Sbjct: 303 FRTLPKEIDQLQNLEGL------DVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEI 356

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKK 465
              ++L SL I+   +L  LP E+G L+ L+ L +    +R +P+ +  L  L  L L+ 
Sbjct: 357 GQLENLESL-ILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEH 415

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
            +   +LP  +   ++L  L I+       LP EI  L  L+ L +K   +  +P+ + Q
Sbjct: 416 -NQLAALPQEIDQLQNLEDL-ILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQ 473

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           L +LE+L LS+N L+ +P  + QL SL  L LS N     P+ +
Sbjct: 474 LQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFATFPKEI 517



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 136/327 (41%), Gaps = 49/327 (14%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
           N+++ + P    K+ +L +L  C   NK      E      LR+       LKTL   I 
Sbjct: 231 NNQLTVLPQEIGKLQKLEVL--CLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIW 288

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +NL  L +  ++   L  ++  L +L+ +D+  ++L+T   ++   QNL+ L L   +
Sbjct: 289 KLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLD-DN 347

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPK-MTS 179
            LT     I  L  LE L L   + LT+LP  I +  L++L     SN  L+ LP+ + +
Sbjct: 348 QLTVLPQEIGQLENLESLILSNNQ-LTTLPQEIGT--LQKLQYLNLSNNQLRTLPQEIGT 404

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                 L L    +  LP  I  L N+ E LI S  RL+ +   I+KL+ LE + +    
Sbjct: 405 LQELEWLNLEHNQLAALPQEIDQLQNL-EDLILSNNRLKTLPKEIWKLRKLEWLYLKNN- 462

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FE 297
                                    KL   P+             L +LE +D  N    
Sbjct: 463 -------------------------KLGSLPKE---------IDQLQNLEYLDLSNNQLR 488

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPE 324
            LP+E+G LQ+L  L + G      P+
Sbjct: 489 TLPNEIGQLQSLEDLDLSGNPFATFPK 515


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 175/339 (51%), Gaps = 30/339 (8%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L+ L  L +   ++  LP+ +GQL  L +L L N  +L  +   I +L++++ 
Sbjct: 63  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL-NSQKLTTLPKEIGQLRNLQE 121

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +++S  ++L   P+      +   +E +    L  N+   L +LP  +   K+L  L++ 
Sbjct: 122 LDLS-FNSLTTLPK------EVGQLENLQRLDLHQNR---LATLPMEIGQLKNLQELDL- 170

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  KL  LP E+  L  L+EL +    +  +PK + QL  L  L L   +   +LP  + 
Sbjct: 171 NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIG 229

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+WL L  N
Sbjct: 230 ELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 288

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L  +P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN L           T
Sbjct: 289 QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL-----------T 337

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           ++P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 338 TLPKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 372



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 163/323 (50%), Gaps = 29/323 (8%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L +   ++  LP+ +GQL
Sbjct: 80  FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 139

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EI-PFCNIDGSGIERIP 387
             L +L+L + + L  +   I +LK+++ +++ N + L   P EI    N+    + R  
Sbjct: 140 ENLQRLDL-HQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHR-- 195

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
                    ++L +LP  +   ++L +L +I   +L  LP E+G L+ L+ L +    + 
Sbjct: 196 ---------NQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQLT 245

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
            +PK + +L   ++ + + +   +LP  +   ++L  L++        LP EIG L+ L+
Sbjct: 246 TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTTLPKEIGQLQNLQ 304

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L +    +  +P+ +GQL +L+ L L +N L  +P+ + QL +L  L L NN L  +P+
Sbjct: 305 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 364

Query: 568 RLDPLSSLKYLDLFENNLDRIPE 590
            +  L SL+ L L  N L  +P+
Sbjct: 365 EVLRLQSLQVLALGSNRLSTLPK 387



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 161/336 (47%), Gaps = 46/336 (13%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L ++   +  LP+ + QL
Sbjct: 126 FNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQL 185

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCN 377
             L +L+L   ++L  +   I +L++++++            EI    NLK        N
Sbjct: 186 RNLQELDLHR-NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL------N 238

Query: 378 IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           +  + +  +P  + +L          +++ +LP  +   ++L  L++    +L  LP E+
Sbjct: 239 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTTLPKEI 297

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           G L+ L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L ++D
Sbjct: 298 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRVLD 353

Query: 490 CKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
             N     LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ + 
Sbjct: 354 LDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIG 413

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           QL +L  L L  N L   P+ +  L +L+ L L+ N
Sbjct: 414 QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 449



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 218/507 (42%), Gaps = 101/507 (19%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           T L   +QN + ++ +DL+Y KL T LP ++   +NL+ LDL + +SLT     +  L  
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKL-TILPKEIGQLRNLQELDLSF-NSLTTLPKEVGQLEN 95

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
           L+ L+L+  K LT+LP  I               L+NL +         L L    +  L
Sbjct: 96  LQRLNLNSQK-LTTLPKEI-------------GQLRNLQE---------LDLSFNSLTTL 132

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS 256
           P  +  L N+  L ++   RL  +   I +L+           NLQ L++ S        
Sbjct: 133 PKEVGQLENLQRLDLHQ-NRLATLPMEIGQLK-----------NLQELDLNSN------- 173

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP--NFERLPDELGNLQALNRLII 314
                   KL   P+           + L +L+ +D        LP E+G LQ L  L +
Sbjct: 174 --------KLTTLPKE---------IRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNL 216

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             T +  LP+ +G        EL+N   L  + + +  L      EI    NL+      
Sbjct: 217 IVTQLTTLPKEIG--------ELQNLKTLNLLDNQLTTLPK----EIGELQNLE------ 258

Query: 375 FCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
              +  + I  +P  + +L          ++L +LP  +   ++L  L++    +L  LP
Sbjct: 259 ILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDL-HQNQLTTLP 317

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            E+G L+ L+EL ++   +  +PK + QL   ++     +   +LP  +   +SL  L  
Sbjct: 318 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL-A 376

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
           +       LP EIG L+ L+VL +    +  +P+ +GQL +L+ L L +N L   P+ + 
Sbjct: 377 LGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIR 436

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSS 574
           QL           NL+ +   L+PLSS
Sbjct: 437 QLK----------NLQELHLYLNPLSS 453



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 170/403 (42%), Gaps = 65/403 (16%)

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             ENL  L +   K+T L  ++  L +L+ +DL ++ L T   ++   +NL+ LDL + +
Sbjct: 92  QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDL-HQN 150

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSC 180
            L      I  L  L+ LDL+  K LT+LP  I   + L+ L L   + L  LPK +   
Sbjct: 151 RLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDLHR-NQLTTLPKEIGQL 208

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
               TL L+   +  LP  I  L N+  L +    +L  +   I +LQ LE + +     
Sbjct: 209 QNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPKEIGELQNLEILVLREN-- 265

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                                         R  +LP      ++L  L+ +       LP
Sbjct: 266 ------------------------------RITALPKEIGQLQNLQWLD-LHQNQLTTLP 294

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            E+G LQ L RL +    +  LP+ +GQ        L+N  EL    + +  L      E
Sbjct: 295 KEIGQLQNLQRLDLHQNQLTTLPKEIGQ--------LQNLQELCLDENQLTTLPK----E 342

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLT 413
           I    NL+        ++D + +  +P  VL+L          ++L +LP  +   ++L 
Sbjct: 343 IEQLQNLR------VLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQ 396

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            L +I   +L  LP E+G L+ L+EL ++   +   PK + QL
Sbjct: 397 VLGLI-SNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 438



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 52/85 (61%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L LS N+L  +P+ + QL +L  L L++  L  +
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPE 590
           P+ +  L +L+ LDL  N+L  +P+
Sbjct: 110 PKEIGQLRNLQELDLSFNSLTTLPK 134


>gi|108740467|gb|ABG01589.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 199/416 (47%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SS      L    ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSXGNAINLLIXDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +   I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPIXI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 SGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 167/375 (44%), Gaps = 69/375 (18%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N ++L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+S  +   L    L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSXGNAINLLIXDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGXAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII---DCPNFERLPDEL 303
              N+       Q   EL LK C + E LP    +  +L SL+I+   DC   +R P+  
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLP----IXINLESLDILVLNDCSMLKRFPEIS 268

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
            N++A   L + GTAI E+P           L +++   L+ +  S F            
Sbjct: 269 TNVRA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF------------ 302

Query: 364 CSNLKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKS 411
             NL  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  S
Sbjct: 303 -DNLVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDS 358

Query: 412 LTSLEIIDCKKLERL 426
           L  ++  DC+ LERL
Sbjct: 359 LKWIDAEDCESLERL 373



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 175/392 (44%), Gaps = 80/392 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNAINLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP   GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSXGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLIXDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGXAINLQNLLLDDCSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
             + + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 IXINL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LSGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVLSDN----NLQIIPESLNQLSS 551
            ++S L+ L+L       +L  IP+SL  + +
Sbjct: 333 KRISRLQTLILKGYRKVVSLPQIPDSLKWIDA 364


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 141/257 (54%), Gaps = 18/257 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSL-EGVPF--TELRYFEWHQFPLK 57
           +SKI  ++++ P  FSKM+ L+ L F G  N+  +  L EG+ +  + +RY  W Q PL+
Sbjct: 537 LSKIR-KLKLGPRIFSKMSNLQFLDFHGKYNRDDMDFLPEGLEYLPSNIRYLRWKQCPLR 595

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L      ++LV L +  S V +LWD +QNLV+LK + L   + + +LPD + A NLE+L
Sbjct: 596 SLPEKFSAKDLVILDLSDSCVQKLWDGMQNLVNLKEVRLYRCQFMEELPDFTKATNLEVL 655

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNLKNLP 175
           +L +C  L+  HSSI  L KLE L++  C +LT L +  IH   L+ L L  C  LK L 
Sbjct: 656 NLSHC-GLSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLELCHGLKELS 714

Query: 176 ----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
                M   ++R +      G++ LPSS    S +  L+IY    ++++ SSI     L 
Sbjct: 715 VTSENMIELNMRGSF-----GLKVLPSSFGRQSKLEILVIY-FSTIQSLPSSIKDCTRLR 768

Query: 232 SIRIHRCPNLQFL-EMP 247
            + +  C  LQ + E+P
Sbjct: 769 CLDLRHCDFLQTIPELP 785



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 179/417 (42%), Gaps = 82/417 (19%)

Query: 382 GIERIPSSV--LKLNKCSKLESLPSSLCMFKSLTSLEIID-CKKLERLPDELGNLEALEE 438
           G+E +PS++  L+  +C  L SLP      K L  L++ D C  +++L D + NL  L+E
Sbjct: 576 GLEYLPSNIRYLRWKQCP-LRSLPEKFSA-KDLVILDLSDSC--VQKLWDGMQNLVNLKE 631

Query: 439 LRV-EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +R+     + E+P       L  L L  C    S+ S ++  K L  LEI  C N  RL 
Sbjct: 632 VRLYRCQFMEELPDFTKATNLEVLNLSHCG-LSSVHSSIFSLKKLEKLEITYCFNLTRLT 690

Query: 498 DE---IGNLEYLKV------------------LTIKGT-AIREVPESLGQLSSLEWLVLS 535
            +   + +L YL +                  L ++G+  ++ +P S G+ S LE LV+ 
Sbjct: 691 SDHIHLSSLRYLNLELCHGLKELSVTSENMIELNMRGSFGLKVLPSSFGRQSKLEILVIY 750

Query: 536 DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
            + +Q +P S+   + L  L L + + L+ IPE    L +L         L     YLR+
Sbjct: 751 FSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIPELPPSLETL---------LANECRYLRT 801

Query: 595 --FPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI---IKDGWMK---------------- 633
             FP++   +    R  ++  NCL LD + L+ I   ++   MK                
Sbjct: 802 VLFPSTAVEQLKENRKKIEFWNCLCLDKHSLTAIELNVQINVMKFACQHFPAPELDFDDY 861

Query: 634 ---------QSVNGETYITKSMY-FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFA 683
                    QS   E    ++ Y +PG+  PKW  +++T   + +        ++L GF 
Sbjct: 862 NDYVVIHDLQSGYEECDSYQATYAYPGSTFPKWLEYKTTNDYVVIDLSSGQLSHQL-GFI 920

Query: 684 FCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
           FC +V          +S  DD K  L+  + D   EG    T  Y+ K    +SDHV
Sbjct: 921 FCFIVP--------KDSKRDD-KLILYITISDCEGEGEKGSTKMYMNKSDSTKSDHV 968


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 214/499 (42%), Gaps = 101/499 (20%)

Query: 101 LTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-K 158
           LT LP ++    +L  L+LG  + LT   + I  L  L+ L L   + LTSLP  I    
Sbjct: 5   LTSLPAEIGQLTSLTKLNLGR-NHLTSVPAEIVQLTTLQELKLYNNQ-LTSLPAEIGQLT 62

Query: 159 YLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKR 216
            L+ L L  C+N   +       L +   LL  G  +  +P+ I  L+++ EL ++   +
Sbjct: 63  SLRELYL--CNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHD-NQ 119

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           L  + + I +L  LE++ +H                         ++L         SLP
Sbjct: 120 LTGVPAEIVQLTTLEALWLH------------------------GNQLT--------SLP 147

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
           +      SLT L + +      LP E+G L +L  L + G  +  +P  +GQL  L KLE
Sbjct: 148 AEIGQLTSLTGLRLYNN-RLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLE 206

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           L + ++L  + + I +L S++++ +             F N                   
Sbjct: 207 LYD-NQLTSVPAEIGQLTSLKALWL-------------FGN------------------- 233

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            +L SLP+ +    SLT L + +  +L  LP E+G L +LE L +    +  VP  + QL
Sbjct: 234 -QLTSLPAEIGQLTSLTGLRLYN-NRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQL 291

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
                 LK+                      +       +P EIG L  L  L++    +
Sbjct: 292 T----SLKEL--------------------WLHGNRLTSVPAEIGQLTSLGALSLYNNRL 327

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
             +PE +GQL+SL+ L L  N L  +PE + QLSSL+ L L +N L  IP  +  L+SL 
Sbjct: 328 TSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQLTSLS 387

Query: 577 YLDLFENNLDRIPEYLRSF 595
            LDL  N L  +P  +R  
Sbjct: 388 VLDLSGNQLTSVPAAIREL 406


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 166/323 (51%), Gaps = 20/323 (6%)

Query: 284 SLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            L +L+++   N     LP E+G LQ L  L ++   +  LP G+GQL  L  L L N +
Sbjct: 82  QLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHN-N 140

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
            L+ +   I KL+ ++ + +   + L+  P+       +   ++    ++  P  + KL 
Sbjct: 141 RLKSLPKEIGKLQKLKRLYLG-GNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLR 199

Query: 395 KCSKLESLPSSLCMFKS----LTSLE--IIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
              +L    + L +       L SLE  I++  +L  LP+E+G L+ LEEL +    +  
Sbjct: 200 SLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVT 259

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P+ +  L  L  L L   + F +LP +++  ++L  L +   +    LP EIG LE L+
Sbjct: 260 LPQEIGALENLQNLHLY-SNQFRTLPKQIWQLQNLQDLHLAHNQ-LTVLPQEIGKLEKLE 317

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L ++   +  +P+ + +L  L++L L++N L+++PE + +L  L  L LSNN L  +P+
Sbjct: 318 DLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQ 377

Query: 568 RLDPLSSLKYLDLFENNLDRIPE 590
           ++  L  LKYLDL  N L  +P+
Sbjct: 378 KIGKLEKLKYLDLSNNQLATLPK 400



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 164/320 (51%), Gaps = 20/320 (6%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
           +LP+G      L +L++++  N   + LP E+G LQ L RL + G  +R LP+ +  L  
Sbjct: 121 TLPNG---IGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQD 177

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L L +  +L+     I KL+S++ + + +   +    EI         +ER+   +L
Sbjct: 178 LEELHL-SRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKL----RSLERL---IL 229

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           + N+ +   +LP+ +   ++L  L + +  +L  LP E+G LE L+ L +     R +PK
Sbjct: 230 ENNQLA---TLPNEIGKLQNLEELNLSN-NQLVTLPQEIGALENLQNLHLYSNQFRTLPK 285

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            + QL  L  L L   +    LP  +   + L  L + D +    LP EI  LE LK L 
Sbjct: 286 QIWQLQNLQDLHLAH-NQLTVLPQEIGKLEKLEDLYLEDNQ-LTTLPKEIWKLEKLKYLD 343

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    +R +PE +G+L  L++L LS+N L+++P+ + +L  L  L LSNN L  +P+ + 
Sbjct: 344 LANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIG 403

Query: 571 PLSSLKYLDLFENNLDRIPE 590
            L  L+ LDL  N     P+
Sbjct: 404 KLEKLEDLDLSGNPFTTFPK 423



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 36/410 (8%)

Query: 152 PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
           P  + S +L R  LR  S      ++ +      L L    +  LP+ I  L N+  L +
Sbjct: 37  PMDVKSLHLNRDQLRTLSQ-----EVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSL 91

Query: 212 YSCKRLENISSSIFKLQFL-----ESIRIHRCPNL--QFLEMPSCNIDGTRSKEQPSSEL 264
           Y+  RL  +   +  LQ L     E+ ++   PN   Q   +   N+   R K  P    
Sbjct: 92  YN-NRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIG 150

Query: 265 KLKKCPRP-------ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
           KL+K  R         +LP      + L  L +      +  P+E+G L++L RLI+D  
Sbjct: 151 KLQKLKRLYLGGNQLRTLPQEIETLQDLEELHL-SRDQLKTFPEEIGKLRSLKRLILDSN 209

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
            +  L + +G+L  L +L L+N ++L  + + I KL+++E + +SN + L   P+     
Sbjct: 210 QLVVLSQEIGKLRSLERLILEN-NQLATLPNEIGKLQNLEELNLSN-NQLVTLPQ----- 262

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
            +   +E + +  L     ++  +LP  +   ++L  L +    +L  LP E+G LE LE
Sbjct: 263 -EIGALENLQNLHLY---SNQFRTLPKQIWQLQNLQDLHLA-HNQLTVLPQEIGKLEKLE 317

Query: 438 ELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL- 496
           +L +E   +  +PK + +L   K      +    LP  +   + L  L++    N +RL 
Sbjct: 318 DLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDL--SNNQLRLL 375

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
           P +IG LE LK L +    +  +P+ +G+L  LE L LS N     P+ +
Sbjct: 376 PQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPKEI 425



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 32/314 (10%)

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           LKN  +++ +  +  +L+++ S E+    NL+        N++ + +  +P+ + +L   
Sbjct: 34  LKNPMDVKSLHLNRDQLRTL-SQEVGTLQNLREL------NLENNQLATLPNEIGQLENL 86

Query: 397 -------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
                  ++L +LP  +   ++L  L + +  +L  LP+ +G LE L+ L +    ++ +
Sbjct: 87  QVLSLYNNRLRTLPQEVGTLQNLRELNL-ENNQLATLPNGIGQLENLQVLNLHNNRLKSL 145

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           PK + +L   K      +   +LP  +   + L  L +         P+EIG L  LK L
Sbjct: 146 PKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHL-SRDQLKTFPEEIGKLRSLKRL 204

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +    +  + + +G+L SLE L+L +N L  +P  + +L +L  L LSNN L  +P+ +
Sbjct: 205 ILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEI 264

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLK 617
             L +L+ L L+ N    +P+ +                T +P E   L    DL     
Sbjct: 265 GALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLY---- 320

Query: 618 LDPNELSEIIKDGW 631
           L+ N+L+ + K+ W
Sbjct: 321 LEDNQLTTLPKEIW 334



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 162/363 (44%), Gaps = 23/363 (6%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
           N+++   P    ++  L++L    ++ + +    E      LR        L TL   I 
Sbjct: 70  NNQLATLPNEIGQLENLQVLSLYNNRLRTLPQ--EVGTLQNLRELNLENNQLATLPNGIG 127

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG--Y 120
             ENL  L +  +++  L  ++  L  LKR+ L  ++L T   ++   Q+LE L L    
Sbjct: 128 QLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQ 187

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP-KMTS 179
             +  E    ++ L +L +LD ++   L+     + S  L+RL+L   + L  LP ++  
Sbjct: 188 LKTFPEEIGKLRSLKRL-ILDSNQLVVLSQEIGKLRS--LERLILEN-NQLATLPNEIGK 243

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                 L L    +  LP  I  L N+  L +YS  +   +   I++LQ L+   +H   
Sbjct: 244 LQNLEELNLSNNQLVTLPQEIGALENLQNLHLYS-NQFRTLPKQIWQLQNLQD--LHLAH 300

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           N Q   +P         K +   +L L+   +  +LP      + L  L++ +      L
Sbjct: 301 N-QLTVLPQ-----EIGKLEKLEDLYLEDN-QLTTLPKEIWKLEKLKYLDLANN-QLRLL 352

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P+E+G L+ L  L +    +R LP+ +G+L  L  L+L N ++L  +   I KL+ +E +
Sbjct: 353 PEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSN-NQLATLPKEIGKLEKLEDL 411

Query: 360 EIS 362
           ++S
Sbjct: 412 DLS 414



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
           D K +  L   + N   +K L +    +R + + +G L +L  L L +N L  +P  + Q
Sbjct: 23  DNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQ 82

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L +L  L L NN L  +P+ +  L +L+ L+L  N L  +P
Sbjct: 83  LENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLP 123


>gi|168050612|ref|XP_001777752.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670853|gb|EDQ57414.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 710

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 250/533 (46%), Gaps = 42/533 (7%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
           +  L  LK ++LK SK L ++P  +     L  L    C ++       + L+ L VL++
Sbjct: 1   MNGLKELKILNLKGSKNLKEMPLGIKNFSKLNKLSFKNCKNMKIVQDVFEGLSSLNVLNM 60

Query: 143 DRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGV-GIEELPS 198
             C+ L  +P S  H   L+ L    C NLK L   T   +++   L LLG   +EE+P 
Sbjct: 61  SGCEQLEMVPKSFEHLICLEELYFEDCINLKKLDA-TCADIKALRILSLLGCENLEEMPL 119

Query: 199 SIKCLSNI-GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
            +K LS +  +L +  C+ LE +   +  L  LE +    C  L+ +       +G  S 
Sbjct: 120 GLKNLSKLEKKLSLSGCENLEEMPLGLKNLSKLELLWFTNCKKLKIVHDA---FEGLIS- 175

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLE---IIDCPNFERLPDELGNLQALNRLII 314
               + L +K C + E +P     F+ LT LE   + DC N ++L      ++AL  L  
Sbjct: 176 ---LNALCIKGCEKLEVVPKS---FEHLTCLEELYLNDCINLKKLDATFVGMRALRVLSF 229

Query: 315 DGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFK-LKSVESIEISNCSNLKGFPE 372
            G   + E+P GL  L+ L KL L NC +L+ I+  IF+ L S+  + +S C  L+  P 
Sbjct: 230 FGCENLEEIPLGLKNLSKLEKLWLTNCKKLK-ITHDIFEGLTSLNLLALSGCVQLEVVPR 288

Query: 373 IPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
                      E +     L LN C  L+ L + L   K+L  L    C+ LE +P  L 
Sbjct: 289 ---------SFEHLTCLEELYLNDCINLKKLDAILVDMKALRILSFSRCENLEEMPLRLK 339

Query: 432 NLEALEELRVEGTGIREVPKSLAQ--LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           NL  LE+L         +   + +   +L+ L L++C   E +P        L  L + D
Sbjct: 340 NLCKLEKLWFTNCKKLNITHDIFEGLTSLNLLTLRECVQLEVVPRSFEHLTCLEELYLND 399

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTA-IREVP---ESLGQLSSLEWLVLSD-NNLQIIPE 544
           C N  +L   +  ++ L++L++ G   ++E+P   ++L +L+SL  L LS  + L+++P+
Sbjct: 400 CINLKKLDAILVGMKALRILSLSGCENLKEMPLGLKNLSKLTSLNLLALSGCDQLEVVPK 459

Query: 545 SLNQLSSLVSLKLSNN-NLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
           S   L+ +  L L +  NL+++      + +L+ L L    NL+ IP  L++ 
Sbjct: 460 SFEHLTCIEELYLDDCINLKKLDATCAGMKALRILSLSGCENLEDIPLRLKNL 512



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 245/568 (43%), Gaps = 75/568 (13%)

Query: 55  PLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNL 113
            L+ L++L  ENL  + +    +++L          K++ L   + L ++P  L     L
Sbjct: 102 ALRILSLLGCENLEEMPLGLKNLSKLE---------KKLSLSGCENLEEMPLGLKNLSKL 152

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLK 172
           E+L    C  L   H + + L  L  L +  C+ L  +P S  H   L+ L L  C NLK
Sbjct: 153 ELLWFTNCKKLKIVHDAFEGLISLNALCIKGCEKLEVVPKSFEHLTCLEELYLNDCINLK 212

Query: 173 NLPKMTSCHLRS--TLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK-LQ 228
            L   T   +R+   L   G   +EE+P  +K LS + +L + +CK+L+ I+  IF+ L 
Sbjct: 213 KLDA-TFVGMRALRVLSFFGCENLEEIPLGLKNLSKLEKLWLTNCKKLK-ITHDIFEGLT 270

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS--SELKLKKCPRPESLPSGQCMFKSLT 286
            L  + +  C  L+ +          RS E  +   EL L  C   + L +     K+L 
Sbjct: 271 SLNLLALSGCVQLEVV---------PRSFEHLTCLEELYLNDCINLKKLDAILVDMKALR 321

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDG----TAIRELPEGLGQLALLSKLELKNCSE 342
            L    C N E +P  L NL  L +L            ++ EGL  L LL+   L+ C +
Sbjct: 322 ILSFSRCENLEEMPLRLKNLCKLEKLWFTNCKKLNITHDIFEGLTSLNLLT---LRECVQ 378

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE +  S   L  +E + +++C NLK    I        G++ +   +L L+ C  L+ +
Sbjct: 379 LEVVPRSFEHLTCLEELYLNDCINLKKLDAILV------GMKAL--RILSLSGCENLKEM 430

Query: 403 PSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-A 457
           P  L     LTSL ++    C +LE +P    +L  +EEL ++    ++++  + A + A
Sbjct: 431 PLGLKNLSKLTSLNLLALSGCDQLEVVPKSFEHLTCIEELYLDDCINLKKLDATCAGMKA 490

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AI 516
           L  L L  C + E +P RL     L      +CK      D    L  L +L + G   +
Sbjct: 491 LRILSLSGCENLEDIPLRLKNLSKLEKFNFSNCKKLKIAHDAFEGLTSLNLLALSGCDQL 550

Query: 517 REVPESLGQLSSLEWLVLSD-------------------------NNLQIIPESLNQLSS 551
             VP S   L+ L+ L L+D                          NL+ +P  L  LS 
Sbjct: 551 EVVPRSFEDLTYLKELYLNDCINLKKLDATCVGMKALRILSLLGCENLEEMPLRLKNLSK 610

Query: 552 LVSLKLSN-NNLERIPERLDPLSSLKYL 578
           L +L L+N   L  I +  + LSSL  L
Sbjct: 611 LENLSLTNCKKLNIIHDAFEGLSSLIML 638



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 217/521 (41%), Gaps = 73/521 (14%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPL---KTLNILH--WENLV 68
           TF  M  LR+L F G +N      LE +P       +  +  L   K L I H  +E L 
Sbjct: 217 TFVGMRALRVLSFFGCEN------LEEIPLGLKNLSKLEKLWLTNCKKLKITHDIFEGLT 270

Query: 69  SLKMPG-SKVTQL-----------------WDDVQNLVSLKRI--DLKYSKLLT-----K 103
           SL +   S   QL                  +D  NL  L  I  D+K  ++L+      
Sbjct: 271 SLNLLALSGCVQLEVVPRSFEHLTCLEELYLNDCINLKKLDAILVDMKALRILSFSRCEN 330

Query: 104 LPDLSLAQN----LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSK 158
           L ++ L       LE L    C  L  TH   + L  L +L L  C  L  +P S  H  
Sbjct: 331 LEEMPLRLKNLCKLEKLWFTNCKKLNITHDIFEGLTSLNLLTLRECVQLEVVPRSFEHLT 390

Query: 159 YLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYS--- 213
            L+ L L  C NLK L   +        L L G   ++E+P  +K LS +  L + +   
Sbjct: 391 CLEELYLNDCINLKKLDAILVGMKALRILSLSGCENLKEMPLGLKNLSKLTSLNLLALSG 450

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE 273
           C +LE +  S   L  +E + +  C NL+        +D T +  +    L L  C   E
Sbjct: 451 CDQLEVVPKSFEHLTCIEELYLDDCINLK-------KLDATCAGMKALRILSLSGCENLE 503

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLP---DELGNLQALNRLIIDGT-AIRELPEGLGQL 329
            +P      K+L+ LE  +  N ++L    D    L +LN L + G   +  +P     L
Sbjct: 504 DIPLR---LKNLSKLEKFNFSNCKKLKIAHDAFEGLTSLNLLALSGCDQLEVVPRSFEDL 560

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L +L L +C  L+ + ++   +K++  + +  C NL+   E+P    + S +E     
Sbjct: 561 TYLKELYLNDCINLKKLDATCVGMKALRILSLLGCENLE---EMPLRLKNLSKLEN---- 613

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIRE 448
            L L  C KL  +  +     SL  L I  C++LE +      L  LE+L ++    +++
Sbjct: 614 -LSLTNCKKLNIIHDAFEGLSSLIMLVISGCEELEVVSRSFECLTCLEQLYLDDCINLKK 672

Query: 449 VPKS-LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           +  + +   AL  + L  C + E +P  L   K+L+ LE I
Sbjct: 673 LDATYIGMKALRIISLSGCENLEEMPLEL---KNLSKLEKI 710


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 162/322 (50%), Gaps = 18/322 (5%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           LE+ D      +P E+G L AL  L ++G  +  +P  +GQL  L K  L   +EL  + 
Sbjct: 188 LELEDVGLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGL-GGNELTSVP 246

Query: 348 SSIFKLKSVESIEISNC------SNLKGFPEIPFCNIDGSGIERIPSSVLKLN------- 394
           + I +L S++ +++S+       +++     +    ++G+ +  +P+ + +L        
Sbjct: 247 AEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGL 306

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
           + ++L S+P+ +    SL+ L + +  +L  +P E+  L +L  L + G  +  VP  + 
Sbjct: 307 RGNQLTSVPAEIGQLTSLSELNL-NNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIG 365

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
           +L +LS+L L   +   S+P+ ++   SL  L  +       +P EIG L  LK L + G
Sbjct: 366 RLTSLSELNLNN-NQLTSVPAEIWQLTSLRGL-FLGGNRLTSVPAEIGRLTSLKGLALYG 423

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             +  VP  +GQL++L  L L  N L+ +P  + QL++L  L L++N L  +P  +  L 
Sbjct: 424 NQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLR 483

Query: 574 SLKYLDLFENNLDRIPEYLRSF 595
           +L  L+L  N L  +P  +R  
Sbjct: 484 ALTSLNLDRNRLTSVPAAIREL 505



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 23/254 (9%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L+L       ++P+ +    +L  L++ +  +L  +P E+G L +L +  + G  +  VP
Sbjct: 188 LELEDVGLTGAVPAEVGRLTALRELDL-NGNQLTSVPVEIGQLTSLVKFGLGGNELTSVP 246

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEII--DCKNFMRLPDEIGNLEYLK 507
             + QL +L  L L   +   S+P+ +     LTSLE +  +      +P EI  L  LK
Sbjct: 247 AEIGQLTSLQWLDLSD-NRLASVPADI---GQLTSLEGLGLNGNQLTSVPAEIWQLTSLK 302

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
           VL ++G  +  VP  +GQL+SL  L L++N L  +P  + QL+SL  L L  N L  +P 
Sbjct: 303 VLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPA 362

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSE---FTSLRLSVDL 612
            +  L+SL  L+L  N L  +P  +                TS+P+E    TSL+     
Sbjct: 363 EIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALY 422

Query: 613 RNCLKLDPNELSEI 626
            N L   P E+ ++
Sbjct: 423 GNQLTSVPAEIGQL 436



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 23/194 (11%)

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
           +L+L+      ++P+ +    +L  L++ +      +P EIG L  L    + G  +  V
Sbjct: 187 ELELEDVGLTGAVPAEVGRLTALRELDL-NGNQLTSVPVEIGQLTSLVKFGLGGNELTSV 245

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           P  +GQL+SL+WL LSDN L  +P  + QL+SL  L L+ N L  +P  +  L+SLK L 
Sbjct: 246 PAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLG 305

Query: 580 LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
           L  N L  +P  +         + TSL       + L L+ N+L+ +  + W   S+ G 
Sbjct: 306 LRGNQLTSVPAEI--------GQLTSL-------SELNLNNNQLTSVPAEIWQLTSLRG- 349

Query: 640 TYITKSMYFPGNEI 653
                 ++  GN +
Sbjct: 350 ------LFLGGNRL 357



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
           R  S+P+      SL  L + +      +P E+  L +L  L + G  +  +P  +GQL 
Sbjct: 264 RLASVPADIGQLTSLEGLGL-NGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLT 322

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-S 389
            LS+L L N ++L  + + I++L S+  + +   + L   P         + I R+ S S
Sbjct: 323 SLSELNLNN-NQLTSVPAEIWQLTSLRGLFLGG-NRLTSVP---------AEIGRLTSLS 371

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            L LN  ++L S+P+ +    SL  L  +   +L  +P E+G L +L+ L + G  +  V
Sbjct: 372 ELNLNN-NQLTSVPAEIWQLTSLRGL-FLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSV 429

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           P  + QL AL++L L++ +  +S+P+ +    +L  L + D      +P EIG L  L  
Sbjct: 430 PAEIGQLTALTELSLQR-NKLKSVPAEIGQLATLKELWLNDNL-LTSVPAEIGQLRALTS 487

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           L +    +  VP ++ +L +  + V  D+ L +
Sbjct: 488 LNLDRNRLTSVPAAIRELRAAGFYVQLDDGLTV 520


>gi|300693822|ref|YP_003749795.1| hypothetical protein RPSI07_mp0822 [Ralstonia solanacearum PSI07]
 gi|299075859|emb|CBJ35168.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum PSI07]
          Length = 932

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 213/512 (41%), Gaps = 82/512 (16%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L + D P  E+LP    +L  L  L +  T +R+LP   G L  L  L L++  +L
Sbjct: 205 ALQRLTVEDSP-LEKLPTGFADLGQLANLSLTNTQLRKLPSSTGTLPALKSLSLQDNPKL 263

Query: 344 EYISSSIFKLKSVESIE--ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS---- 397
           E +  S+  ++ +  I   I    +  G P +    +D + + ++PS    L   +    
Sbjct: 264 EQLPKSLGHVEELTLIGGLIHELPSASGMPSLQTLTVDKAPLAKLPSDFGALGNLAHLSL 323

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK--- 451
              KL  LP S     +L +L + D  KLE LP   G L  L+EL + G  I E+P    
Sbjct: 324 SNTKLRELPPSTRNLSTLKTLSLQDNPKLETLPRSFGQLSGLQELTLTGNRIHELPSVGG 383

Query: 452 --SLAQLALSKLKLKKCSS-----------------FESLPSRLYVSKSLTSLEIIDCKN 492
             SL +L +    L K  S                    LPS +    +L +L + D + 
Sbjct: 384 MSSLHKLTVDDASLAKLPSDFGALGNLAHLSLSNTQLRELPSGIGDLSALKTLSLQDNQQ 443

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL-SS 551
              LP  +G L  L+ LT+K + +RE+P  + Q S+L+ L + ++ L+ +P     L   
Sbjct: 444 LAALPSSLGQLSGLEALTLKNSGVRELP-PISQASALKALTVENSPLESLPAGFGSLCKQ 502

Query: 552 LVSLKLSNNNLERIPERLDPLSSLKYLDLFEN------------NLDRIP-------EYL 592
           L  L LSN  L  +P  +  LS L  L L  N             LD++        E L
Sbjct: 503 LTQLSLSNTQLRTLPSSIGKLSQLTQLTLKNNPRLESLTDASIQKLDKVTTIDLSGCERL 562

Query: 593 RSFPTSIP----------SEFTSLRLS------VDLRNCLKLD-PNELSEIIKDGWMKQS 635
            + P+SI           S  TSL ++      V  R+ LK+  P  L + ++D  ++Q+
Sbjct: 563 SALPSSIGKLPKLNRLDLSGCTSLTMASLPRSLVFPRDELKVIFPEHLKDSVRDARIRQN 622

Query: 636 VNGE----------TYITKSMYFPG-NEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
              +            +  +M+ P   + P     ++ G  IS+      GYN+L     
Sbjct: 623 PRAQLLDGHLELQNRAMNNAMFGPDETDEPMTRVPENEGEVISMAFHAKHGYNRLEALRQ 682

Query: 685 CVVVACSVSECCRHESVEDDRKCNLFDVVCDR 716
               + + S     ES++     N+ +++ DR
Sbjct: 683 NARSSMATSANKTAESMQ-RALGNMVNLMPDR 713



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 157/337 (46%), Gaps = 46/337 (13%)

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           +LPD   ++  L ++      + EL   L  L LL  L LK    L+ +  ++++L ++ 
Sbjct: 126 KLPDVTFDIAHLKKIETVDCDLHELQPALENLFLLETLSLKGAKNLKALPDAVWRLPALT 185

Query: 358 SIEISNCSNLKGFPEIPFCN------IDGSGIERIPSSVLKLNKCS-------KLESLPS 404
            + ++  + +K  P +   +      ++ S +E++P+    L + +       +L  LPS
Sbjct: 186 ELTLAE-TGIKALPPMAGASALQRLTVEDSPLEKLPTGFADLGQLANLSLTNTQLRKLPS 244

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK-----SLAQLALS 459
           S     +L SL + D  KLE+LP  LG++E   EL + G  I E+P      SL  L + 
Sbjct: 245 STGTLPALKSLSLQDNPKLEQLPKSLGHVE---ELTLIGGLIHELPSASGMPSLQTLTVD 301

Query: 460 KLKLKKC-SSFESLPSRLYVS----------------KSLTSLEIIDCKNFMRLPDEIGN 502
           K  L K  S F +L +  ++S                 +L +L + D      LP   G 
Sbjct: 302 KAPLAKLPSDFGALGNLAHLSLSNTKLRELPPSTRNLSTLKTLSLQDNPKLETLPRSFGQ 361

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L  L+ LT+ G  I E+P S+G +SSL  L + D +L  +P     L +L  L LSN  L
Sbjct: 362 LSGLQELTLTGNRIHELP-SVGGMSSLHKLTVDDASLAKLPSDFGALGNLAHLSLSNTQL 420

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
             +P  +  LS+LK L L +N      + L + P+S+
Sbjct: 421 RELPSGIGDLSALKTLSLQDN------QQLAALPSSL 451



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 216/517 (41%), Gaps = 100/517 (19%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +LR     + P  T +I H + + ++      + +L   ++NL  L+ + LK +K L  L
Sbjct: 118 QLRRLPVPKLPDVTFDIAHLKKIETVDC---DLHELQPALENLFLLETLSLKGAKNLKAL 174

Query: 105 PD----------LSLAQN-----------------------LEILDLGYCS-------SL 124
           PD          L+LA+                        LE L  G+         SL
Sbjct: 175 PDAVWRLPALTELTLAETGIKALPPMAGASALQRLTVEDSPLEKLPTGFADLGQLANLSL 234

Query: 125 TETH-----SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
           T T      SS   L  L+ L L     L  LP S+   +++ L L G   +  LP  + 
Sbjct: 235 TNTQLRKLPSSTGTLPALKSLSLQDNPKLEQLPKSL--GHVEELTLIGGL-IHELPSASG 291

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                TL +    + +LPS    L N+  L + + K L  +  S   L  L+++ +   P
Sbjct: 292 MPSLQTLTVDKAPLAKLPSDFGALGNLAHLSLSNTK-LRELPPSTRNLSTLKTLSLQDNP 350

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            L+ L      + G +       EL L    R   LPS   M  SL  L + D  +  +L
Sbjct: 351 KLETLPRSFGQLSGLQ-------ELTLTGN-RIHELPSVGGM-SSLHKLTVDDA-SLAKL 400

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P + G L  L  L +  T +RELP G+G L+ L  L L++  +L  + SS+ +L  +E++
Sbjct: 401 PSDFGALGNLAHLSLSNTQLRELPSGIGDLSALKTLSLQDNQQLAALPSSLGQLSGLEAL 460

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            + N                 SG+  +P     +++ S L++L               ++
Sbjct: 461 TLKN-----------------SGVRELP----PISQASALKAL--------------TVE 485

Query: 420 CKKLERLPDELGNL-EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP-SRL 476
              LE LP   G+L + L +L +  T +R +P S+ +L+ L++L LK     ESL  + +
Sbjct: 486 NSPLESLPAGFGSLCKQLTQLSLSNTQLRTLPSSIGKLSQLTQLTLKNNPRLESLTDASI 545

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                +T++++  C+    LP  IG L  L  L + G
Sbjct: 546 QKLDKVTTIDLSGCERLSALPSSIGKLPKLNRLDLSG 582


>gi|296081086|emb|CBI18280.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 151/329 (45%), Gaps = 75/329 (22%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++E L++L + G+ I+E+P
Sbjct: 249 LCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIP 308

Query: 451 KSLAQL-------------------------ALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            S+ +L                         +L  L +K C   + LP  L     L SL
Sbjct: 309 SSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENL---GRLQSL 365

Query: 486 EIIDCKNF----MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           EI+  K+F     +LP  +  L  L++L +    +RE+P  +  L+SL+ LVL  N    
Sbjct: 366 EILYVKDFDSMNCQLP-SLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSS 424

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPS 601
            P+ ++QL  L+ L LS+  L                      L  IPE   +  T +  
Sbjct: 425 KPDGISQLHKLIVLNLSHCKL----------------------LQHIPEPPSNLITLVAH 462

Query: 602 EFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG----ETYITKSMYFPGNEIPKWF 657
           + TSL++S  L           S   K G +++ V G    +T+I +S     N IP+W 
Sbjct: 463 QCTSLKISSSLL---------WSPFFKSG-IQKFVPGVKLLDTFIPES-----NGIPEWI 507

Query: 658 RHQSTGSTISLKTPQPTGYN-KLMGFAFC 685
            HQ  GS I+L  PQ    N   +GFA C
Sbjct: 508 SHQKKGSKITLTLPQNWYENDDFLGFALC 536



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 17/231 (7%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   +SLPS  C FKSLT+L    C   E  P+ L +++ L +L + G+AI+E+P
Sbjct: 249 LCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIP 308

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             + +L  L  L L  C  L  +  SI  L S++++ I +C  LK  PE          +
Sbjct: 309 SSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPE---------NL 359

Query: 384 ERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
            R+ S  +L +     +     SL    SL  L +I+C  L  +P  + +L +L+ L + 
Sbjct: 360 GRLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLM 418

Query: 443 GTGIREVPKSLAQL-ALSKLKLKKCSSFESL---PSRLY--VSKSLTSLEI 487
           G      P  ++QL  L  L L  C   + +   PS L   V+   TSL+I
Sbjct: 419 GNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITLVAHQCTSLKI 469



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 12/214 (5%)

Query: 136 KLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
           +L+ L L  CK L SLP+SI   K L  L   GCS L++ P+ +    +   L L G  I
Sbjct: 245 ELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAI 304

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
           +E+PSSI+ L  + +L +  CK L N+  SI  L  L+++ I  CP L+  ++P  N+  
Sbjct: 305 KEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELK--KLPE-NLGR 361

Query: 254 TRSKE-QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
            +S E     +     C  P    SG C   SL  L +I+C     +P  + +L +L  L
Sbjct: 362 LQSLEILYVKDFDSMNCQLPSL--SGLC---SLRILRLINC-GLREIPSGICHLTSLQCL 415

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           ++ G      P+G+ QL  L  L L +C  L++I
Sbjct: 416 VLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHI 449



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           ++++  LK++DL  S +      +   + L+ L+L YC +L     SI  L  L+ L + 
Sbjct: 288 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 347

Query: 144 RCKSLTSLP------TSIHSKYLKRLVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEEL 196
            C  L  LP       S+   Y+K      C     LP ++  C LR  L L+  G+ E+
Sbjct: 348 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQ----LPSLSGLCSLR-ILRLINCGLREI 402

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
           PS I  L+++ + L+    +  +    I +L  L  + +  C  LQ +  P  N+
Sbjct: 403 PSGICHLTSL-QCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNL 456


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 144/300 (48%), Gaps = 49/300 (16%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L+SLP+S+C FK L +     C +LE  P+ L ++E LE+L ++G+ I+E+P S
Sbjct: 946  LRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSS 1005

Query: 453  LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
            + +L                       + L  L +  C+N + LP+ I NL  LK LTI 
Sbjct: 1006 IQRL-----------------------RGLQDLNLAYCRNLVNLPESICNLTSLKTLTIT 1042

Query: 513  G-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN-QLSSLVSL--KLSNNNLERIPER 568
                ++++PE+LG+L SLE L + D       +S+N QL SL  L    + N L  +P+ 
Sbjct: 1043 SCPELKKLPENLGRLQSLESLHVKDF------DSMNCQLPSLSVLLEIFTTNQLRSLPDG 1096

Query: 569  LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
            +  L  L +LDL    L      L+  P ++PS  T     VD   C  L  +  S ++ 
Sbjct: 1097 ISQLHKLGFLDLSHCKL------LQHIP-ALPSSVTY----VDAHQCTSLKIS--SSLLW 1143

Query: 629  DGWMKQSVNGETYITK-SMYFP-GNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFC 685
              + K  +       K  ++ P  N IP+W  HQ  GS I+L  PQ    N   +GFA C
Sbjct: 1144 SPFFKSGIQEFVQRNKVGIFLPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALC 1203



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 27/199 (13%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +L L  C  LE LP  +  +K L +L   +C KL+R P+  GN+  L EL + GT I E+
Sbjct: 536 ILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEEL 595

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S              SSFE L       K+L  L    C    ++P ++  L  L+VL
Sbjct: 596 PSS--------------SSFEHL-------KALKILSFNRCSKLNKIPIDVCCLSSLEVL 634

Query: 510 TIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            +    I E  +P  + +LSSL+ L L  N+ + IP ++NQLS L  L LS+  NLE +P
Sbjct: 635 DLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLEHVP 694

Query: 567 ERLDPLSSLKYLDLFENNL 585
           E     SSL+ LD    NL
Sbjct: 695 EL---PSSLRLLDAHGPNL 710



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 124/310 (40%), Gaps = 83/310 (26%)

Query: 42  PFTELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
           P  EL YF W  + L++L    H ++L +L + GS + QLW   +    LK I+L +S  
Sbjct: 462 PSYELTYFHWDGYSLESLPTNFHAKDLAALILRGSNIKQLWRGNKLHNKLKVINLSFSVH 521

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
           LT++PD S   NLEI                        L L  C++L  LP  I+  K+
Sbjct: 522 LTEIPDFSSVPNLEI------------------------LILKGCENLECLPRDIYKWKH 557

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
           L+ L    CS LK  P++   ++R    L L G  IEELPS                   
Sbjct: 558 LQTLSCGECSKLKRFPEIKG-NMRKLRELDLSGTAIEELPS------------------- 597

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
              SSS   L+ L+ +  +RC  L                                 +P 
Sbjct: 598 ---SSSFEHLKALKILSFNRCSKLN-------------------------------KIPI 623

Query: 278 GQCMFKSLTSLEIIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
             C   SL  L++  C   E  +P ++  L +L  L +     R +P  + QL+ L  L 
Sbjct: 624 DVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLN 683

Query: 337 LKNCSELEYI 346
           L +C  LE++
Sbjct: 684 LSHCQNLEHV 693



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 40/253 (15%)

Query: 136  KLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  C++L SLPTSI   K+LK     GCS L++ P+ +    +   L L G  I
Sbjct: 940  ELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAI 999

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI+ L  + +L +  C+ L N+  SI  L  L+++ I  CP L+ L         
Sbjct: 1000 KEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKL--------- 1050

Query: 254  TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
                              PE+L         L SLE +   +F+ +  +L +L  L   I
Sbjct: 1051 ------------------PENL-------GRLQSLESLHVKDFDSMNCQLPSLSVLLE-I 1084

Query: 314  IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
                 +R LP+G+ QL  L  L+L +C  L++I +      SV  ++   C++LK    +
Sbjct: 1085 FTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALP---SSVTYVDAHQCTSLKISSSL 1141

Query: 374  PFCNIDGSGIERI 386
             +     SGI+  
Sbjct: 1142 LWSPFFKSGIQEF 1154



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 13/174 (7%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C   +SLP+  C FK L +     C   E  P+ L +++ L +L +DG+AI+E+P  
Sbjct: 946  LRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSS 1005

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----------IPF 375
            + +L  L  L L  C  L  +  SI  L S++++ I++C  LK  PE          +  
Sbjct: 1006 IQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHV 1065

Query: 376  CNIDGSGIERIP--SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
             + D    + +P  S +L++   ++L SLP  +     L  L++  CK L+ +P
Sbjct: 1066 KDFDSMNCQ-LPSLSVLLEIFTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIP 1118



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 116/285 (40%), Gaps = 67/285 (23%)

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           SL SLPT+ H+K L  L+LRG SN+K L +    H                         
Sbjct: 475 SLESLPTNFHAKDLAALILRG-SNIKQLWRGNKLH------------------------- 508

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
                    +L+ I+ S F +   E       PNL+ L                     L
Sbjct: 509 --------NKLKVINLS-FSVHLTEIPDFSSVPNLEIL--------------------IL 539

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP--E 324
           K C   E LP     +K L +L   +C   +R P+  GN++ L  L + GTAI ELP   
Sbjct: 540 KGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSS 599

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIE 384
               L  L  L    CS+L  I   +  L S+E +++S C+ ++G      C +      
Sbjct: 600 SFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRL------ 653

Query: 385 RIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
              SS+ +LN K +   S+P+++     L  L +  C+ LE +P+
Sbjct: 654 ---SSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLEHVPE 695



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 27/252 (10%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           + E+P   +   L  L LK C + E LP  +Y  K L +L   +C    R P+  GN+  
Sbjct: 522 LTEIPDFSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRK 581

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWL----VLSDN---NLQIIPESLNQLSSLVSLKLS 558
           L+ L + GTAI E+P S    SS E L    +LS N    L  IP  +  LSSL  L LS
Sbjct: 582 LRELDLSGTAIEELPSS----SSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLS 637

Query: 559 NNNLER--IPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL 616
             N+    IP  +  LSSLK L+L  N+        RS P +I ++ + L++ ++L +C 
Sbjct: 638 YCNIMEGGIPSDICRLSSLKELNLKSND-------FRSIPATI-NQLSRLQV-LNLSHCQ 688

Query: 617 KLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQP-TG 675
            L+   + E+     +  +      ++ + + P + +   F  +   S   L  PQ    
Sbjct: 689 NLE--HVPELPSSLRLLDAHGPNLTLSTASFLPFHSLVNCFNSKIQRSETEL--PQNCYQ 744

Query: 676 YNKLMGFAFCVV 687
            N+ +GFA C V
Sbjct: 745 NNEFLGFAICCV 756


>gi|6721163|gb|AAF26791.1|AC016829_15 putative disease resistance protein [Arabidopsis thaliana]
          Length = 896

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 135/270 (50%), Gaps = 33/270 (12%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +LR   W QFP+ +L +  H E LV L MP SK+ +LW+ +Q L +L+ +DL  S+ L +
Sbjct: 653 KLRLLHWQQFPMTSLPSEFHAEFLVKLCMPYSKLEKLWEGIQPLRNLEWLDLTCSRNLKE 712

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKR 162
           LPDLS A NL+ L +  CSSL +  SSI     L+ ++L  C SL  LP+S  +   L+ 
Sbjct: 713 LPDLSTATNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQE 772

Query: 163 LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
           L LR CS+L                       ELP+S   L+N+  L  Y C  L  + S
Sbjct: 773 LDLRECSSLV----------------------ELPTSFGNLANVESLEFYECSSLVKLPS 810

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
           +   L  L  + +  C ++  +E+PS    G  +  Q    L L+KC     LPS     
Sbjct: 811 TFGNLTNLRVLGLRECSSM--VELPSSF--GNLTNLQV---LNLRKCSTLVELPSSFVNL 863

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRL 312
            +L +L++ DC +   LP   GN+  L RL
Sbjct: 864 TNLENLDLRDCSSL--LPSSFGNVTYLKRL 891



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 34/238 (14%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           E L  G    ++L  L++    N + LPD L     L RL I+  +++ +LP  +G+   
Sbjct: 687 EKLWEGIQPLRNLEWLDLTCSRNLKELPD-LSTATNLQRLSIERCSSLVKLPSSIGEATN 745

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L K+ L+ C  L  + SS   L +++ +++  CS+L   P   F N+  + +E      L
Sbjct: 746 LKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELP-TSFGNL--ANVES-----L 797

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           +  +CS L  LPS+     +L  L + +C  +  LP   GNL  L+              
Sbjct: 798 EFYECSSLVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQ-------------- 843

Query: 452 SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
                    L L+KCS+   LPS      +L +L++ DC +   LP   GN+ YLK L
Sbjct: 844 --------VLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL--LPSSFGNVTYLKRL 891



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 21/175 (12%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L I  C +  +LP  +G    L ++ + +  ++ ELP   G L  L +L+L+ CS 
Sbjct: 721 NLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSS 780

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG---------SGIERIPSS---- 389
           L  + +S   L +VES+E   CS+L   P   F N+           S +  +PSS    
Sbjct: 781 LVELPTSFGNLANVESLEFYECSSLVKLPST-FGNLTNLRVLGLRECSSMVELPSSFGNL 839

Query: 390 ----VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
               VL L KCS L  LPSS     +L +L++ DC  L  LP   GN+  L+ L+
Sbjct: 840 TNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL--LPSSFGNVTYLKRLK 892



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 12/209 (5%)

Query: 422 KLERLPDELGNLEALEELRVE-GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           KLE+L + +  L  LE L +     ++E+P       L +L +++CSS   LPS +  + 
Sbjct: 685 KLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERCSSLVKLPSSIGEAT 744

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD-NN 538
           +L  + + +C + + LP   GNL  L+ L ++  +++ E+P S G L+++E L   + ++
Sbjct: 745 NLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYECSS 804

Query: 539 LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
           L  +P +   L++L  L L   +++  +P     L++L+ L+L      R    L   P+
Sbjct: 805 LVKLPSTFGNLTNLRVLGLRECSSMVELPSSFGNLTNLQVLNL------RKCSTLVELPS 858

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           S  +  T+L  ++DLR+C  L P+    +
Sbjct: 859 SFVN-LTNLE-NLDLRDCSSLLPSSFGNV 885


>gi|238908352|emb|CAZ40338.1| putative disease resistance protein [Raphanus sativus]
          Length = 2100

 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 32/316 (10%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           MS I  ++ I+   F+ M  LR LK   ++      VH  E + F   LR   W  +P K
Sbjct: 660 MSTILHDMDISARAFTSMRNLRFLKVYKTRCDTNVRVHLPEDMEFPPRLRLLHWEVYPRK 719

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L      E+LV L +  +++ QLW+  Q L +LK++ L     L +LPDL+ A NLE L
Sbjct: 720 FLPRTFCTEHLVELYLRDTELEQLWEGTQPLTNLKKMFLGSCLYLKELPDLAKATNLEKL 779

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
            L  C SL E HSS+  L+KLE L++  C +L  +P   +   L+  ++ GC  L++LP 
Sbjct: 780 RLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLASLESFMMVGCYQLRSLPD 839

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           +++     ++P     +EE    I+  S++  L IY C   EN          LE +R  
Sbjct: 840 ISTTITELSIP--DTLLEEFTEPIRLWSHLQRLDIYGCG--EN----------LEQVR-- 883

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF 296
              ++    +P C  D  R +     EL +  CP+  SLP    + +SLT L + +C + 
Sbjct: 884 --SDIAVERIPDCIKDLQRLE-----ELTIFCCPKLVSLPE---LPRSLTLLIVYECDSL 933

Query: 297 ERL-PDELGN-LQALN 310
           E L P  LG+ ++AL+
Sbjct: 934 ETLAPFPLGSEIEALS 949



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 19/274 (6%)

Query: 2    SKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTEL-RYFEWHQFPLKT 58
            S I + + I+   F +M +LR L    ++      VH  E + F  L R   W  +P K 
Sbjct: 1598 STIPNGVYISAQGFRRMRDLRFLSIYETRRDPNVRVHLPEDMSFPPLLRLLHWEVYPGKC 1657

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L + L  E+LV L    S + QLW  VQ L +LK++DL  S  L ++PDLS A +L+ L+
Sbjct: 1658 LPHTLRPEHLVELCFVNSMLEQLWQGVQPLTNLKKMDLSGSLSLKEVPDLSNATSLKRLN 1717

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  C SL E  SSI  L+KLE L+++ C S+   PT ++   L+ L + GC  L  +P  
Sbjct: 1718 LTGCWSLVEIPSSIGDLHKLEELEMNLCVSVQVFPTLLNLASLESLRMVGCWQLSKIPD- 1776

Query: 178  TSCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
                L + +  L VG   ++E P S++  S++  L IY       +  +  +   L +  
Sbjct: 1777 ----LPTNIKSLVVGETMLQEFPESVRLWSHLHSLNIYGSVLTVPLLETTSQEFSLAAAT 1832

Query: 235  IHRCPN-------LQFLEMPSCNIDGTRSKEQPS 261
            I R P+       L+FL +  C   G+  +  PS
Sbjct: 1833 IERIPDWIKDFNGLRFLYIAGCTKLGSLPELPPS 1866



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 31/179 (17%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI----- 373
           ++ELP+ L +   L KL L  C  L  I SS+  L  +ES+E++ C NL+  P +     
Sbjct: 764 LKELPD-LAKATNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLAS 822

Query: 374 --PFCNIDGSGIERIPSSVLKLNKCSK----LESLPSSLCMFKSLTSLEIIDCKK----- 422
              F  +    +  +P     + + S     LE     + ++  L  L+I  C +     
Sbjct: 823 LESFMMVGCYQLRSLPDISTTITELSIPDTLLEEFTEPIRLWSHLQRLDIYGCGENLEQV 882

Query: 423 -----LERLPDELGNLEALEELRV----EGTGIREVPKSLAQLALSKLKLKKCSSFESL 472
                +ER+PD + +L+ LEEL +    +   + E+P+SL  L +      +C S E+L
Sbjct: 883 RSDIAVERIPDCIKDLQRLEELTIFCCPKLVSLPELPRSLTLLIVY-----ECDSLETL 936



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 157/395 (39%), Gaps = 68/395 (17%)

Query: 423  LERLPDELGNLEALEELRVEGT-GIREVPKSLAQLALSKLKLKKCSSFESLPS------- 474
            LE+L   +  L  L+++ + G+  ++EVP      +L +L L  C S   +PS       
Sbjct: 1677 LEQLWQGVQPLTNLKKMDLSGSLSLKEVPDLSNATSLKRLNLTGCWSLVEIPSSIGDLHK 1736

Query: 475  ------RLYVS----------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
                   L VS           SL SL ++ C    ++PD   N   +K L +  T ++E
Sbjct: 1737 LEELEMNLCVSVQVFPTLLNLASLESLRMVGCWQLSKIPDLPTN---IKSLVVGETMLQE 1793

Query: 519  VPESLGQLSSLEWLVLSDNNLQI-IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
             PES+   S L  L +  + L + + E+ +Q        L+   +ERIP+ +   + L++
Sbjct: 1794 FPESVRLWSHLHSLNIYGSVLTVPLLETTSQ-----EFSLAAATIERIPDWIKDFNGLRF 1848

Query: 578  LDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
            L +     L  +PE   S    I     SL        C   D      +          
Sbjct: 1849 LYIAGCTKLGSLPELPPSLRKLIVDNCESLETV-----CFPCDTPTTDYLYFPNCFMLCQ 1903

Query: 637  NGETYITKS---MYFPGNEIP--KWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
              +  IT+     YFPG E+P  ++  H+S GS++++  P       +  F  C+V+   
Sbjct: 1904 EAKRVITQQSLRAYFPGKEMPAAEFDDHRSFGSSLTIIRP------AICKFRICLVL--- 1954

Query: 692  VSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGEN 751
                    S   D +   F ++   R++G  S        ++ ++ +H+F+    F    
Sbjct: 1955 --------SPAPDMEEAYFKLLFRIRAKGCPSDDDMLSLDLAKIQGEHLFIFHIEFV--- 2003

Query: 752  SCKRSDEFFFHIDRSCCEVK--KCGIHFVHAQRQR 784
              +  +E  F    S  EV   +CG+  +  +  R
Sbjct: 2004 --EHHEEMVFKFSTSSHEVDVIECGVQVLTDETSR 2036



 Score = 42.7 bits (99), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 68/369 (18%)

Query: 446  IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
            ++E+P       L KL+L +C S   + S +     L SLE+  C N   +P+ + NL  
Sbjct: 764  LKELPDLAKATNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPN-LFNLAS 822

Query: 506  LKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL------- 557
            L+   + G   +R +P+    ++ L    + D  L+   E +   S L  L +       
Sbjct: 823  LESFMMVGCYQLRSLPDISTTITELS---IPDTLLEEFTEPIRLWSHLQRLDIYGCGENL 879

Query: 558  ----SNNNLERIPERLDPLSSLKYLDLF-ENNLDRIPEYLRSFPTSIPSEFTSLRL---- 608
                S+  +ERIP+ +  L  L+ L +F    L  +PE  RS    I  E  SL      
Sbjct: 880  EQVRSDIAVERIPDCIKDLQRLEELTIFCCPKLVSLPELPRSLTLLIVYECDSLETLAPF 939

Query: 609  -------SVDLRNCLKLDPNELSEI--IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
                   ++    C +LD      I  ++  W              +  PG  IP  F H
Sbjct: 940  PLGSEIEALSFPECFRLDREARRVITQLQSSW--------------VCLPGRNIPAEFHH 985

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRK---CNLFDVVCDR 716
            +  G+ +++ +     Y     F  C VV+       +   VED+     C++    C  
Sbjct: 986  RVIGNFLAICS---NAYR----FKLCAVVS------PKQVMVEDEDIELLCHILINGCPM 1032

Query: 717  RSEGYDSYTSSYLGKISHVESDHVFL-GSSIFAGENSCKRSDEFFFHIDRSC--CEVKKC 773
            +S       S Y  +I  ++S+H+F+  S++   +    +  E  F    +    E+ KC
Sbjct: 1033 KS----PIKSIYNLRI-RIQSEHLFIFPSTMLKEDRQLGQYSEILFKFSTTSQNTEIIKC 1087

Query: 774  GIHFVHAQR 782
            G+  +  +R
Sbjct: 1088 GVQILRDRR 1096



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 47/235 (20%)

Query: 297  ERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            E+L   +  L  L ++ + G+ +++E+P+ L     L +L L  C  L  I SSI  L  
Sbjct: 1678 EQLWQGVQPLTNLKKMDLSGSLSLKEVPD-LSNATSLKRLNLTGCWSLVEIPSSIGDLHK 1736

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
            +E +E++ C +++ FP                                 +L    SL SL
Sbjct: 1737 LEELEMNLCVSVQVFP---------------------------------TLLNLASLESL 1763

Query: 416  EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
             ++ C +L ++PD   N+++   L V  T ++E P+S+ +L      L    S  ++P  
Sbjct: 1764 RMVGCWQLSKIPDLPTNIKS---LVVGETMLQEFPESV-RLWSHLHSLNIYGSVLTVPLL 1819

Query: 476  LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG----TAIREVPESLGQL 526
               S+  +    +      R+PD I +   L+ L I G     ++ E+P SL +L
Sbjct: 1820 ETTSQEFS----LAAATIERIPDWIKDFNGLRFLYIAGCTKLGSLPELPPSLRKL 1870


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 256/553 (46%), Gaps = 47/553 (8%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           K+T L  ++ NL +L+++ L Y+  LT LP ++   Q LE LDL Y +SL      I  L
Sbjct: 64  KLTNLPKEIGNLQNLQKLSL-YNNQLTTLPKEIGKLQKLEWLDLNY-NSLATLPKEIGKL 121

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVG 192
            KL+ L L   + LT+ P  I   + L++L L   + L  LPK +        L L G  
Sbjct: 122 QKLDDLRLPNNQ-LTTFPKEIEKLQKLQKLSL-AHNQLTTLPKEIGKLQKLKVLNLDGNQ 179

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS---- 248
              LP  I+ L  + EL + S  +   +   I KLQ L+ + ++   N Q   +P     
Sbjct: 180 FTTLPKEIEKLQKLKELHLGS-NQFTTLPKEIKKLQNLQGLHLN---NNQLKTLPKEIGK 235

Query: 249 -CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+ G       +++LK        +LP      ++L  L + +      LP E+G LQ
Sbjct: 236 LQNLQGLHLN---NNQLK--------TLPKEIGKLQNLQGLHL-NNNQLTTLPKEIGKLQ 283

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN---- 363
            L  L +    +  LP+ +G+L  L  L     +EL  +   I KL++++ +++ +    
Sbjct: 284 NLQGLGLHYNQLTTLPKEIGKLQKLQVLSFY-SNELTTLPKEIKKLQNLQWLDLHSNQLT 342

Query: 364 --CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTS 414
                +    ++   ++  + +  +P  + KL K        ++L +LP  +   + L  
Sbjct: 343 TLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKK 402

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L + +  +L  LP E+GNL+ L  L +    +  +P  +  L   K      +  ++LP 
Sbjct: 403 LYLYN-NRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPK 461

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            +   + L  L++ D +    +P+EIGNL+ L+ L +    +  +P+ +G L  LE L L
Sbjct: 462 EIGNLQKLRGLDLSDNQ-LTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYL 520

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP--EYL 592
           S N L  +P+ +  L SL SL LSNN L   PE +  L  LK+L L EN    +P  E +
Sbjct: 521 SGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEIGKLQHLKWLRL-ENIPTLLPQKEKI 579

Query: 593 RSFPTSIPSEFTS 605
           R    ++  +F S
Sbjct: 580 RKLLPNVTIDFGS 592



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 257/564 (45%), Gaps = 94/564 (16%)

Query: 101 LTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
           LT LP ++   QNL+ L L Y + LT     I  L KLE LDL+   SL +LP  I  K 
Sbjct: 65  LTNLPKEIGNLQNLQKLSL-YNNQLTTLPKEIGKLQKLEWLDLN-YNSLATLPKEI-GKL 121

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
            K   LR  +N     ++T+                 P  I+ L  + +L + +  +L  
Sbjct: 122 QKLDDLRLPNN-----QLTT----------------FPKEIEKLQKLQKLSL-AHNQLTT 159

Query: 220 ISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
           +   I KLQ L+ +                N+DG +    P    KL+K  +   L S Q
Sbjct: 160 LPKEIGKLQKLKVL----------------NLDGNQFTTLPKEIEKLQKL-KELHLGSNQ 202

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                           F  LP E+  LQ L  L ++   ++ LP+ +G+L  L  L L N
Sbjct: 203 ----------------FTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNN 246

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFP-EI-PFCNIDGSGIE-----RIPSSVLK 392
            ++L+ +   I KL++++ + ++N + L   P EI    N+ G G+       +P  + K
Sbjct: 247 -NQLKTLPKEIGKLQNLQGLHLNN-NQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGK 304

Query: 393 LNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   ++L  L++    +L  L  E+G L+ L+EL +    
Sbjct: 305 LQKLQVLSFYSNELTTLPKEIKKLQNLQWLDL-HSNQLTTLSKEIGKLQKLQELHLSSNQ 363

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +  +PK + +L  L +L L   +   +LP  +   + L  L + + +    LP EIGNL+
Sbjct: 364 LTTLPKEIGKLQKLQELHLGD-NQLTTLPEEIGKLQKLKKLYLYNNR-LTTLPKEIGNLQ 421

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L +    +  +P  +G L  L+WL L+ N L+ +P+ +  L  L  L LS+N L  
Sbjct: 422 KLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTT 481

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRL--SV 610
           IPE +  L  L+ LDL +N L  +P+ + +              T++P E  +L+   S+
Sbjct: 482 IPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESL 541

Query: 611 DL-RNCLKLDPNELSEIIKDGWMK 633
           +L  N L   P E+ ++    W++
Sbjct: 542 NLSNNPLTSFPEEIGKLQHLKWLR 565



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 205/502 (40%), Gaps = 98/502 (19%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P    K+ +L++L   G++   +   +E +   +  +   +QF      I   +NL  L 
Sbjct: 161 PKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLH 220

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
           +  +++  L  ++  L +L+ + L  ++L T   ++   QNL+ L L   + LT     I
Sbjct: 221 LNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLN-NNQLTTLPKEI 279

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV 191
             L  L+ L L     LT+LP  I  K  K  VL   SN     ++T+            
Sbjct: 280 GKLQNLQGLGL-HYNQLTTLPKEI-GKLQKLQVLSFYSN-----ELTT------------ 320

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
               LP  IK L N+  L ++S  +L  +S  I KLQ L+   +H   N Q   +P    
Sbjct: 321 ----LPKEIKKLQNLQWLDLHS-NQLTTLSKEIGKLQKLQ--ELHLSSN-QLTTLPK--- 369

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                K Q   EL L    +  +LP  +           +       LP E+GNLQ L  
Sbjct: 370 --EIGKLQKLQELHLGDN-QLTTLPE-EIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRG 425

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L +    +  LP           +E+ N  +L+++  +  +LK++   EI N   L+G  
Sbjct: 426 LDLGNNKLTALP-----------IEIGNLQKLKWLYLTFNQLKTLPK-EIGNLQKLRG-- 471

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
                 +D S               ++L ++P  +   + L  L++ D  +L  LP E+G
Sbjct: 472 ------LDLSD--------------NQLTTIPEEIGNLQKLRGLDLSD-NQLTTLPKEIG 510

Query: 432 NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           NL+ LE L + G  +  +PK +                          ++L SLE ++  
Sbjct: 511 NLQDLEVLYLSGNQLTTLPKEI--------------------------ENLQSLESLNLS 544

Query: 492 N--FMRLPDEIGNLEYLKVLTI 511
           N      P+EIG L++LK L +
Sbjct: 545 NNPLTSFPEEIGKLQHLKWLRL 566


>gi|108740413|gb|ABG01562.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740415|gb|ABG01563.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 198/406 (48%), Gaps = 57/406 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL  LP                       SI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRHCSNLVELP-----------------------SIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +  +LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------F 375
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPEI         
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEISTNVRALYL 275

Query: 376 CNIDGSGIERIPSSVLKLNKCSKL-----ESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           C   G+ IE +P S+    +  +L     ++L     +   +T+L++ D K L+ +P  +
Sbjct: 276 C---GTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNLDLSD-KDLQEVPPLI 331

Query: 431 GNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
             +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 332 KRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 189/430 (43%), Gaps = 76/430 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L  L  +DL    +L  LP    +  L++L L GCS+L                
Sbjct: 4   YLSVQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+ + +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       EL L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------ELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+   N+ AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
           ++ D                          ++EVP  + ++S L+ L+L       +L  
Sbjct: 318 DLSD------------------------KDLQEVPPLIKRISRLQTLILKGYRKVVSLPQ 353

Query: 542 IPESLNQLSS 551
           IP+SL  + +
Sbjct: 354 IPDSLKWIDA 363


>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
          Length = 1232

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 28/327 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSK--NKCMVHSL-----EGVPF--TELRYFEWHQFPLK 57
           E+ ++  TF+KM +LR LKF  S    +C          EG+ F   ELRY  W ++P K
Sbjct: 571 EMGLDSDTFNKMDDLRYLKFYNSHCHRECEAEDSKLNFPEGLEFLPQELRYLNWLKYPEK 630

Query: 58  TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L I    +NL+ LK+P S++ Q+W++ ++  +L+ +DL +S  L  L  LS AQ L+ +
Sbjct: 631 NLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQKLQSI 690

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C+ L      +Q +  L  L+L  C SL SLP  I    L+ L+L  CS  K   K
Sbjct: 691 NLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLP-DITLVGLRTLILSNCSRFKEF-K 748

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           + + +L   L L G  I+ELPS+I  L  +  L +  CK L ++  SI  L+ ++ I + 
Sbjct: 749 LIAKNLEE-LYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILS 807

Query: 237 RCPNLQFLEMPSCN----------IDGTRSKEQPSSELKLKKCPRPES---LPSGQCMFK 283
            C +L+    P  N          +DGT  K+ P      +          LP       
Sbjct: 808 GCSSLE--SFPEVNQNLKHLKTLLLDGTAIKKIPELSSVRRLSLSSNEFRILPRSIGYLY 865

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALN 310
            L  L++  C N   +P    NLQ L+
Sbjct: 866 HLNWLDLKHCKNLVSVPMLPPNLQWLD 892



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 216/483 (44%), Gaps = 65/483 (13%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SV 390
            L  L+L + S+L  +S  + + + ++SI +  C+ LK  P++         ++ + S   
Sbjct: 664  LQWLDLNHSSKLHSLSG-LSRAQKLQSINLEGCTGLKTLPQV---------LQNMESLMF 713

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C+ LESLP        L +L + +C + +       NLE   EL ++GT I+E+P
Sbjct: 714  LNLRGCTSLESLPD--ITLVGLRTLILSNCSRFKEFKLIAKNLE---ELYLDGTAIKELP 768

Query: 451  KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             ++  L  L  LKLK C +  SLP  +   K++  + +  C +    P+   NL++LK L
Sbjct: 769  STIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTL 828

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP-- 566
             + GTAI+++PE            LS N  +I+P S+  L  L  L L +  NL  +P  
Sbjct: 829  LLDGTAIKKIPELSSVRRL----SLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVPML 884

Query: 567  ----ERLDPLS--SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP 620
                + LD     SL+ + +  + L    E+L S  T I +  T L   V+  N ++  P
Sbjct: 885  PPNLQWLDAHGCISLETISILSDPLLAETEHLHS--TFIFTNCTKL-YKVE-ENSIESYP 940

Query: 621  NELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM 680
             +  +++ +   +        +   + FPG ++P WF H++ G  +    P+      L 
Sbjct: 941  RKKIQLMSNALARYEKGLALDVLIGICFPGWQVPGWFNHRTVGLELKQNLPRHWNAGGLA 1000

Query: 681  GFAFCVVVACS--VSE------CCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKI 732
            G A C VV+    +S+       C  E  ++D+    F  +    +E + SY +      
Sbjct: 1001 GIALCAVVSFKDYISKNNRLLVTCSGEFKKEDKTLFQFSCILGGWTE-HGSYEA------ 1053

Query: 733  SHVESDHVFLGSSIFAGENSCKRSDEFF---------FHI-----DRSCCEVKKCGIHFV 778
              ++SDHVF+G + +   N  K  D            F +     + + C V KCG   +
Sbjct: 1054 REIKSDHVFIGYTSWL--NFMKSDDSIGCVATEASLRFQVTDGTREVTNCTVVKCGFSLI 1111

Query: 779  HAQ 781
            ++ 
Sbjct: 1112 YSH 1114



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 23/255 (9%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           IE++    K  SN+  L +    +L ++S  + + Q L+SI +  C  L+ L     N++
Sbjct: 651 IEQIWEEEKDTSNLQWLDLNHSSKLHSLSG-LSRAQKLQSINLEGCTGLKTLPQVLQNME 709

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
                      L L+ C   ESLP        L +L + +C  F+       NL+    L
Sbjct: 710 SLMF-------LNLRGCTSLESLP--DITLVGLRTLILSNCSRFKEFKLIAKNLE---EL 757

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            +DGTAI+ELP  +G L  L  L+LK+C  L  +  SI  LK+++ I +S CS+L+ FPE
Sbjct: 758 YLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSLESFPE 817

Query: 373 I-------PFCNIDGSGIERIPS---SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           +           +DG+ I++IP            ++   LP S+     L  L++  CK 
Sbjct: 818 VNQNLKHLKTLLLDGTAIKKIPELSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKN 877

Query: 423 LERLPDELGNLEALE 437
           L  +P    NL+ L+
Sbjct: 878 LVSVPMLPPNLQWLD 892


>gi|108740354|gb|ABG01533.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740356|gb|ABG01534.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740378|gb|ABG01545.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740380|gb|ABG01546.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 198/406 (48%), Gaps = 57/406 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL  LP                       SI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRHCSNLVELP-----------------------SIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +  +LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------F 375
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPEI         
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEISTNVRALYL 275

Query: 376 CNIDGSGIERIPSSVLKLNKCSKL-----ESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           C   G+ IE +P S+    +  +L     ++L     +   +T+L++ D K L+ +P  +
Sbjct: 276 C---GTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNLDLSD-KDLQEVPPLI 331

Query: 431 GNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
             +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 332 KRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 189/430 (43%), Gaps = 76/430 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L  L  +DL    +L  LP    +  L++L L GCS+L                
Sbjct: 4   YLSVQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+ + +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       EL L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------ELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+   N+ AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
           ++ D                          ++EVP  + ++S L+ L+L       +L  
Sbjct: 318 DLSD------------------------KDLQEVPPLIKRISRLQTLILKGYRKVVSLPQ 353

Query: 542 IPESLNQLSS 551
           IP+SL  + +
Sbjct: 354 IPDSLKWIDA 363


>gi|27923042|dbj|BAC55934.1| PopC [Ralstonia solanacearum]
          Length = 1024

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 200/450 (44%), Gaps = 66/450 (14%)

Query: 166 RGCSNLKNLPKMT--SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           R   +LK++ +M+  S HL+S LP     + ELP     ++++  L    C  L  + ++
Sbjct: 190 RAVDHLKSVLRMSGDSVHLKS-LP-----VPELPDVTFEIAHLKNLETVDCD-LHALPAT 242

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  LE++ +    NL+ L  P         +E   SE  LK  P     P G     
Sbjct: 243 LENLFLLETLSLKGAKNLKAL--PDAVWRLPALQELKLSETGLKSLP-----PVGGG--S 293

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I D P  E+LP    +L  L  L +  T + +L  G+GQL  L  L L++  +L
Sbjct: 294 ALQRLTIEDSP-LEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 352

Query: 344 EYISSSIFKLKSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS---- 397
           E +  S+ +++ +  I   I    +  G   +    +D S + ++P+    L   +    
Sbjct: 353 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAKLPADFGTLGNLAHVSL 412

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              KL  LP+S+    +L +L + D  KL  LP   G L  L+EL + G  I E+P    
Sbjct: 413 SNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELP---- 468

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                   +   SS ++L               +D      LP + G L  L  L++  T
Sbjct: 469 -------SMGGASSLQTL--------------TVDDTALAGLPADFGALRNLAHLSLSNT 507

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            +RE+P + G L +L+ L L  N  L  +P SL  LS L  L L N+++  +P  + P S
Sbjct: 508 QLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPP-MGPGS 566

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEF 603
           +LK L + EN          S PTSIP++ 
Sbjct: 567 ALKTLTV-EN----------SPPTSIPADI 585



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 222/542 (40%), Gaps = 109/542 (20%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
            L+     + P  T  I H +NL ++      +  L   ++NL  L+ + LK +K L  L
Sbjct: 207 HLKSLPVPELPDVTFEIAHLKNLETVDC---DLHALPATLENLFLLETLSLKGAKNLKAL 263

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
           PD                       ++  L  L+ L L     L SLP       L+RL 
Sbjct: 264 PD-----------------------AVWRLPALQELKLSET-GLKSLPPVGGGSALQRLT 299

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
           +                           +E+LP+    L  +  L + + K LE +SS I
Sbjct: 300 IEDSP-----------------------LEQLPAGFADLDQLASLSLSNTK-LEKLSSGI 335

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
            +L  L+S+ +   P L+ L      ++          EL L    R  +LPS   M  S
Sbjct: 336 GQLPALKSLSLQDNPKLERLPKSLGQVE----------ELTLIGG-RIHALPSASGM-SS 383

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L  L  +D  +  +LP + G L  L  + +  T +R+LP  +G L  L  L L++  +L 
Sbjct: 384 LQKL-TVDNSSLAKLPADFGTLGNLAHVSLSNTKLRDLPASIGNLFTLKTLSLQDNPKLG 442

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
            + +S  +L  ++ +                  ++G+ I  +PS    +   S L++L  
Sbjct: 443 SLPASFGQLSGLQEL-----------------TLNGNRIHELPS----MGGASSLQTL-- 479

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
                        +D   L  LP + G L  L  L +  T +RE+P +   L AL  L L
Sbjct: 480 ------------TVDDTALAGLPADFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSL 527

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           +      +LPS L     L+ LE +  KN     LP  +G    LK LT++ +    +P 
Sbjct: 528 QGNQQLATLPSSLGY---LSGLEELTLKNSSVSELP-PMGPGSALKTLTVENSPPTSIPA 583

Query: 522 SLG-QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN-NLERIPER-LDPLSSLKYL 578
            +G Q   L  L LS+  L+ +P S+ +LS+L  L L NN  LE + E  +  L S++ +
Sbjct: 584 DIGIQCERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKI 643

Query: 579 DL 580
           DL
Sbjct: 644 DL 645



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 14/207 (6%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
           L +LP++L     L +L +   K L+ LPD +  L AL+EL++  TG++ +P      AL
Sbjct: 236 LHALPATLENLFLLETLSLKGAKNLKALPDAVWRLPALQELKLSETGLKSLPPVGGGSAL 295

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IR 517
            +L ++  S  E LP+       L SL + + K   +L   IG L  LK L+++    + 
Sbjct: 296 QRLTIED-SPLEQLPAGFADLDQLASLSLSNTK-LEKLSSGIGQLPALKSLSLQDNPKLE 353

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +P+SLGQ   +E L L    +  +P S + +SSL  L + N++L ++P     L +L +
Sbjct: 354 RLPKSLGQ---VEELTLIGGRIHALP-SASGMSSLQKLTVDNSSLAKLPADFGTLGNLAH 409

Query: 578 LDLFENNLDRIPEYLRSFPTSIPSEFT 604
           + L           LR  P SI + FT
Sbjct: 410 VSLSNTK-------LRDLPASIGNLFT 429



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 131/314 (41%), Gaps = 46/314 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
              + SL+++ +  S L  KLP D     NL  + L   + L +  +SI  L  L+ L L
Sbjct: 378 ASGMSSLQKLTVDNSSL-AKLPADFGTLGNLAHVSL-SNTKLRDLPASIGNLFTLKTLSL 435

Query: 143 DRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIK 201
                L SLP S      L+ L L G + +  LP M       TL +    +  LP+   
Sbjct: 436 QDNPKLGSLPASFGQLSGLQELTLNG-NRIHELPSMGGASSLQTLTVDDTALAGLPADFG 494

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--NIDGTRSKEQ 259
            L N+  L + S  +L  + ++   L  L+++ +    N Q   +PS    + G      
Sbjct: 495 ALRNLAHLSL-SNTQLRELPANTGNLHALKTLSLQG--NQQLATLPSSLGYLSGL----- 546

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG-NLQALNRLIIDGTA 318
              EL LK     E  P G     +L +L + + P    +P ++G   + L +L +  T 
Sbjct: 547 --EELTLKNSSVSELPPMGPG--SALKTLTVENSPPTS-IPADIGIQCERLTQLSLSNTQ 601

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYIS-------------------------SSIFKL 353
           +R LP  +G+L+ L  L LKN + LE +S                         SSI KL
Sbjct: 602 LRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGLLSSIGKL 661

Query: 354 KSVESIEISNCSNL 367
               ++++S C+ L
Sbjct: 662 PKPRTLDLSGCTGL 675


>gi|108740395|gb|ABG01553.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 198/406 (48%), Gaps = 57/406 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL  LP                       SI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRHCSNLVELP-----------------------SIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +  +LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------F 375
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPEI         
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEISTNVRALYL 275

Query: 376 CNIDGSGIERIPSSVLKLNKCSKL-----ESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           C   G+ IE +P S+    +  +L     ++L     +   +T+L++ D K L+ +P  +
Sbjct: 276 C---GTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNLDLSD-KDLQEVPPLI 331

Query: 431 GNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
             +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 332 KRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 180/409 (44%), Gaps = 72/409 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L  L  +DL    +L  LP    +  L++L L GCS+L                
Sbjct: 4   YLSVQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+ + +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       EL L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------ELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+   N+ AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
           ++ D                          ++EVP  + ++S L+ L+L
Sbjct: 318 DLSD------------------------KDLQEVPPLIKRISRLQTLIL 342



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 125/246 (50%), Gaps = 16/246 (6%)

Query: 295 NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           N + LPD L     L +L + G +++ +LP  +G    L  L+L  CS L  + S     
Sbjct: 23  NLKELPD-LSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPS-FGDA 80

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            +++ + + +CSNL   P I      G+ I       L L  CS L  LPSS+    +L 
Sbjct: 81  INLQKLLLRHCSNLVELPSI------GNAINL---RELDLYYCSSLIRLPSSIGNAINLL 131

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQ-LALSKLKLKKCSSFES 471
            L++  C  L  LP  +GN   L++L +     + E+P S+   + L  L L  CSS   
Sbjct: 132 ILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLK 191

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLE 530
           LPS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+
Sbjct: 192 LPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LESLD 250

Query: 531 WLVLSD 536
            LVL+D
Sbjct: 251 RLVLND 256


>gi|227438113|gb|ACP30546.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 799

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 129/227 (56%), Gaps = 10/227 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLK----FCGSKNKCMV-HSLEGVPFTELRYFEWHQFP 55
           MS+++ E+ I+   F KMT L+ L+    F     K  + H L+ +P  +LR      +P
Sbjct: 538 MSELDDEVYISEKAFKKMTNLQFLRLYNHFPDEAVKLQLPHGLDYLP-RKLRLLHRDSYP 596

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           +K + +    E LV L +  SK+ +LW+ VQ L SL  +DL  SK +  +P+LS A NLE
Sbjct: 597 IKCMPSKFRPEFLVELTLRDSKLVKLWEGVQPLTSLTYMDLSSSKNIKDIPNLSGAMNLE 656

Query: 115 ILDLGYCSSL-TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            L L +C +L T + SS+Q LNKL+VLD+  C  L +LPT+I+ + L  L LRGCS LK 
Sbjct: 657 KLYLRFCENLVTVSSSSLQNLNKLKVLDMSCCTKLKALPTNINLESLSVLNLRGCSKLKR 716

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
            P +++      + L    IE++PS I+  S +  L +  CK L+ +
Sbjct: 717 FPCIST--QVQFMSLGETAIEKVPSLIRLCSRLVSLEMAGCKNLKTL 761



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 35/231 (15%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQ----------ALNRLIIDGTAIRELPEGLGQLAL 331
           FK +T+L+ +   N    PDE   LQ           L  L  D   I+ +P    +   
Sbjct: 552 FKKMTNLQFLRLYN--HFPDEAVKLQLPHGLDYLPRKLRLLHRDSYPIKCMPSKF-RPEF 608

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS-GIERIPSSV 390
           L +L L++ S+L  +   +  L S+  +++S+  N+K  P     N+ G+  +E+     
Sbjct: 609 LVELTLRD-SKLVKLWEGVQPLTSLTYMDLSSSKNIKDIP-----NLSGAMNLEK----- 657

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLEALEELRVEG-TGI 446
           L L  C  L ++ SS    ++L  L+++D   C KL+ LP  + NLE+L  L + G + +
Sbjct: 658 LYLRFCENLVTVSSS--SLQNLNKLKVLDMSCCTKLKALPTNI-NLESLSVLNLRGCSKL 714

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           +  P    Q+    L     ++ E +PS + +   L SLE+  CKN   LP
Sbjct: 715 KRFPCISTQVQFMSLGE---TAIEKVPSLIRLCSRLVSLEMAGCKNLKTLP 762


>gi|297836396|ref|XP_002886080.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331920|gb|EFH62339.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1098

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 24/298 (8%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLNI- 61
           SE+ ++     +M  LR L    +++    ++H  + + F   LR   W  +P K+L + 
Sbjct: 536 SEVILSNRALRRMCNLRFLSVYKTRHDGNDIMHIPDDMKFPPRLRLLHWEAYPSKSLPLG 595

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L M  S++ +LW+  Q L +LK++DL  S  L +LPDLS A NLE L+LG C
Sbjct: 596 FCLENLVELNMKDSQLEKLWEGTQLLRNLKKMDLSRSVHLKELPDLSNATNLERLELGDC 655

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            +L E  +SI  L+KLE L +  C SL  +PT I+   L+ + + GCS LK  P  ++  
Sbjct: 656 MALVELPTSIGNLHKLENLVMSNCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNI 715

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            R  L L G  +E++P+SI   S + +  I     L++++       F E + +      
Sbjct: 716 ER--LLLRGTSVEDVPASISHWSRLSDFCIKDNGSLKSLT------HFPERVELLTLSYT 767

Query: 242 QFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
               +P C     G +S       L +  C +  SLP    +  SL  L  +DC + E
Sbjct: 768 DIETIPDCIKGFHGLKS-------LDVAGCRKLTSLPE---LPMSLGLLVALDCESLE 815



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 56/260 (21%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  LE+ DC     LP  +GNL  L  L+                       + NC  L
Sbjct: 646 NLERLELGDCMALVELPTSIGNLHKLENLV-----------------------MSNCISL 682

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID-----GSGIERIPSSVLKLNK--- 395
           E I + I  L S+E I ++ CS LK FP+    NI+     G+ +E +P+S+   ++   
Sbjct: 683 EVIPTHI-NLASLEHITMTGCSRLKTFPDFS-TNIERLLLRGTSVEDVPASISHWSRLSD 740

Query: 396 -CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG----TGIREVP 450
            C K      SL  F     L  +    +E +PD +     L+ L V G    T + E+P
Sbjct: 741 FCIKDNGSLKSLTHFPERVELLTLSYTDIETIPDCIKGFHGLKSLDVAGCRKLTSLPELP 800

Query: 451 KSLAQLAL-----------------SKLKLKKCSSFESLPSRLYVSKSLTS-LEIIDCKN 492
            SL  L                   ++L    C   +    RL + +  T  L+   C  
Sbjct: 801 MSLGLLVALDCESLEIVTYPLNTPSARLNFTNCFKLDEESRRLIIQRCATQFLDGFSCLP 860

Query: 493 FMRLPDEIGNLEYLKVLTIK 512
              +P+E  +      LTI+
Sbjct: 861 GRVMPNEFNHRTTGNSLTIR 880



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 132/335 (39%), Gaps = 81/335 (24%)

Query: 433 LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           LE L EL ++ + + ++ +    L  L K+ L +    + LP  L  + +L  LE+ DC 
Sbjct: 598 LENLVELNMKDSQLEKLWEGTQLLRNLKKMDLSRSVHLKELPD-LSNATNLERLELGDCM 656

Query: 492 NFMRLPDEIGNLEYLKVLT----------------------------------------- 510
             + LP  IGNL  L+ L                                          
Sbjct: 657 ALVELPTSIGNLHKLENLVMSNCISLEVIPTHINLASLEHITMTGCSRLKTFPDFSTNIE 716

Query: 511 ---IKGTAIREVPESLGQLSSLEWLVLSDN----NLQIIPESLNQLSSLVSLKLSNNNLE 563
              ++GT++ +VP S+   S L    + DN    +L   PE +  L+      LS  ++E
Sbjct: 717 RLLLRGTSVEDVPASISHWSRLSDFCIKDNGSLKSLTHFPERVELLT------LSYTDIE 770

Query: 564 RIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRL----------SVDL 612
            IP+ +     LK LD+     L  +PE   S    +  +  SL +           ++ 
Sbjct: 771 TIPDCIKGFHGLKSLDVAGCRKLTSLPELPMSLGLLVALDCESLEIVTYPLNTPSARLNF 830

Query: 613 RNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            NC KLD  E   +I      Q ++G + +      PG  +P  F H++TG++++++   
Sbjct: 831 TNCFKLD-EESRRLIIQRCATQFLDGFSCL------PGRVMPNEFNHRTTGNSLTIRLSS 883

Query: 673 PTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKC 707
              +     F  CVV++ +      H S   D +C
Sbjct: 884 SVSFK----FKACVVISPNQQH---HPSEHTDIRC 911


>gi|242086464|ref|XP_002443657.1| hypothetical protein SORBIDRAFT_08g022995 [Sorghum bicolor]
 gi|241944350|gb|EES17495.1| hypothetical protein SORBIDRAFT_08g022995 [Sorghum bicolor]
          Length = 1143

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 170/359 (47%), Gaps = 50/359 (13%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLAL 331
           ES+P        L  L I        LPD +  L++L  L + D   +  LPE  G LA 
Sbjct: 413 ESVPEHVTSLSKLMYLNISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLAN 472

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDG---------SG 382
           LS L L NCS L+ +  S+ KL+S+  +++S C NL   PE  F +++          S 
Sbjct: 473 LSHLNLANCSLLKALPESVNKLRSLLHLDLSGCCNLSSLPE-SFGDLENLSHLNLTNCSL 531

Query: 383 IERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           ++ +P SV        L L+ C  L SLP S     +LT L + +C  L  LPD +  L 
Sbjct: 532 LKALPESVNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDSVDKLR 591

Query: 435 ALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            L  L + G   +  +P+S   +  LS L L  CS  ++LP  ++  KSL  L++  C +
Sbjct: 592 DLFCLDLSGCCNLCSLPESSGDMMNLSHLYLANCSLLKTLPESVHKLKSLRHLDLSGCTS 651

Query: 493 FMRLPDEIGNLEYLKVLTI-KGTAIREVPESLGQLSSLEWLVLSD--------------- 536
              LP+  G+L  L  L + K T +  +P+S G+L  L++L LSD               
Sbjct: 652 LCSLPECFGDLINLSHLNLAKCTDLCSLPKSFGRLFELQYLNLSDCLRLDLWFDIETVCC 711

Query: 537 ------------NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
                        +L  IPES+  L +L +L LS  + ++R PE L  ++SLK+L + E
Sbjct: 712 LTKLQYLNLSRCPSLMHIPESVINLKNLHTLDLSRCHWIQRFPESLCGMASLKFLLIHE 770



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 181/384 (47%), Gaps = 47/384 (12%)

Query: 67  LVSLKMPGS-KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           L+ L + GS K++ L D V+ L SL  +DL  S  L+ LP+      NL  L+L  CS L
Sbjct: 425 LMYLNISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLANLSHLNLANCSLL 484

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
                S+  L  L  LDL  C +L+SLP S    + L  L L  CS LK LP+  +  LR
Sbjct: 485 KALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNCSLLKALPESVN-KLR 543

Query: 184 STLPLLGVG---IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           S L L   G   +  LP S   L+N+ +L + +C  L  +  S+ KL+ L  + +  C N
Sbjct: 544 SLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDSVDKLRDLFCLDLSGCCN 603

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           L                           C  PES  SG  M  +L+ L + +C   + LP
Sbjct: 604 L---------------------------CSLPES--SGDMM--NLSHLYLANCSLLKTLP 632

Query: 301 DELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           + +  L++L  L + G T++  LPE  G L  LS L L  C++L  +  S  +L  ++ +
Sbjct: 633 ESVHKLKSLRHLDLSGCTSLCSLPECFGDLINLSHLNLAKCTDLCSLPKSFGRLFELQYL 692

Query: 360 EISNCSNLKGFPEI-PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
            +S+C  L  + +I   C +            L L++C  L  +P S+   K+L +L++ 
Sbjct: 693 NLSDCLRLDLWFDIETVCCL-------TKLQYLNLSRCPSLMHIPESVINLKNLHTLDLS 745

Query: 419 DCKKLERLPDELGNLEALEELRVE 442
            C  ++R P+ L  + +L+ L + 
Sbjct: 746 RCHWIQRFPESLCGMASLKFLLIH 769


>gi|15238807|ref|NP_197337.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005160|gb|AED92543.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 900

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPF--TELRYFEWHQFP 55
           +SKIN E+ +N   F  M  L  L+F     SK++  +H   G+ +   +LR   W  FP
Sbjct: 538 ISKIN-ELFLNERAFGGMHNLLFLRFYKSSSSKDQPELHLPRGLDYLPRKLRLLHWDAFP 596

Query: 56  LKTLNILHW-ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
           + ++ +    + LV + +  S++ +LW+  Q L SLK++DL  S+ L ++PDLS A N+E
Sbjct: 597 MTSMPLSFCPQFLVVINIRESQLEKLWEGTQPLRSLKQMDLSKSENLKEIPDLSKAVNIE 656

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            L L YC SL    SSI+ LNKL VLD+  C  L  +P ++  + L  L L GCS L++ 
Sbjct: 657 ELCLSYCGSLVMLPSSIKNLNKLVVLDMKYCSKLEIIPCNMDLESLSILNLDGCSRLESF 716

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
           P+++S      L L    IEE+P+++     +  L +  CK L+        +++L+  R
Sbjct: 717 PEISS--KIGFLSLSETAIEEIPTTVASWPCLAALDMSGCKNLKTFPCLPKTIEWLDLSR 774

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
                  +  E+P   ID    K    ++L +  C +  S+ SG    + + +L+ + C 
Sbjct: 775 T------EIEEVPLW-ID----KLSKLNKLLMNSCMKLRSISSGISTLEHIKTLDFLGCK 823

Query: 295 NFERLPDEL 303
           N    P E+
Sbjct: 824 NIVSFPVEI 832



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 26/228 (11%)

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
           +LE +      L+ L+ + + +  NL+  E+P        SK     EL L  C     L
Sbjct: 618 QLEKLWEGTQPLRSLKQMDLSKSENLK--EIPDL------SKAVNIEELCLSYCGSLVML 669

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSK 334
           PS       L  L++  C   E +P  + +L++L+ L +DG + +   PE   ++  LS 
Sbjct: 670 PSSIKNLNKLVVLDMKYCSKLEIIPCNM-DLESLSILNLDGCSRLESFPEISSKIGFLSL 728

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSV 390
            E    + +E I +++     + ++++S C NLK FP +P    + ++  + IE +P  +
Sbjct: 729 SE----TAIEEIPTTVASWPCLAALDMSGCKNLKTFPCLPKTIEWLDLSRTEIEEVPLWI 784

Query: 391 LKL--------NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            KL        N C KL S+ S +   + + +L+ + CK +   P E+
Sbjct: 785 DKLSKLNKLLMNSCMKLRSISSGISTLEHIKTLDFLGCKNIVSFPVEI 832


>gi|15242334|ref|NP_199333.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1261

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 171/348 (49%), Gaps = 22/348 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSK--NKCMVHSL-----EGVPF--TELRYFEWHQFPLK 57
           E+ ++  TF+KM +LR LKF  S    +C          EG+ F   ELRY  W ++P K
Sbjct: 571 EMGLDSDTFNKMDDLRYLKFYNSHCHRECEAEDSKLNFPEGLEFLPQELRYLNWLKYPEK 630

Query: 58  TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L I    +NL+ LK+P S++ Q+W++ ++  +L+ +DL +S  L  L  LS AQ L+ +
Sbjct: 631 NLPINFDPKNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLSGLSRAQKLQSI 690

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C+ L      +Q +  L  L+L  C SL SLP  I    L+ L+L  CS  K   K
Sbjct: 691 NLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLP-DITLVGLRTLILSNCSRFKEF-K 748

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           + + +L   L L G  I+ELPS+I  L  +  L +  CK L ++  SI  L+ ++ I + 
Sbjct: 749 LIAKNLEE-LYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILS 807

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPN 295
            C +L+    P  N +    K        +KK P     L   Q +  S ++  + + P 
Sbjct: 808 GCSSLE--SFPEVNQNLKHLKTLLLDGTAIKKIPDILHHLSPDQGLTSSQSNCHLCEWPR 865

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
                  +  L ++ RL +     R LP  +G L  L+ L+LK+C  L
Sbjct: 866 ------GIYGLSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNL 907



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 218/504 (43%), Gaps = 78/504 (15%)

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SV 390
            L  L+L + S+L  +S  + + + ++SI +  C+ LK  P++         ++ + S   
Sbjct: 664  LQWLDLNHSSKLHSLSG-LSRAQKLQSINLEGCTGLKTLPQV---------LQNMESLMF 713

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C+ LESLP        L +L + +C + +       NLE   EL ++GT I+E+P
Sbjct: 714  LNLRGCTSLESLPD--ITLVGLRTLILSNCSRFKEFKLIAKNLE---ELYLDGTAIKELP 768

Query: 451  KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             ++  L  L  LKLK C +  SLP  +   K++  + +  C +    P+   NL++LK L
Sbjct: 769  STIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSLESFPEVNQNLKHLKTL 828

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDNNLQI--IPESLNQLSSLVSLKLSNNNLERIPE 567
             + GTAI+++P+ L  LS  + L  S +N  +   P  +  LSS+  L LS+N    +P 
Sbjct: 829  LLDGTAIKKIPDILHHLSPDQGLTSSQSNCHLCEWPRGIYGLSSVRRLSLSSNEFRILPR 888

Query: 568  RLDPLSSLKYLDLFE-NNLDRIP-----------------EYLRSFPTSIPSEFTSLRLS 609
             +  L  L +LDL    NL  +P                 E +      + +E   L  +
Sbjct: 889  SIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLETISILSDPLLAETEHLHST 948

Query: 610  VDLRNCLKL----------DPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
                NC KL           P +  +++ +   +        +   + FPG ++P WF H
Sbjct: 949  FIFTNCTKLYKVEENSIESYPRKKIQLMSNALARYEKGLALDVLIGICFPGWQVPGWFNH 1008

Query: 660  QSTGSTISLKTPQPTGYNKLMGFAFCVVVACS--VSE------CCRHESVEDDRKCNLFD 711
            ++ G  +    P+      L G A C VV+    +S+       C  E  ++D+    F 
Sbjct: 1009 RTVGLELKQNLPRHWNAGGLAGIALCAVVSFKDYISKNNRLLVTCSGEFKKEDKTLFQFS 1068

Query: 712  VVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFF---------FH 762
             +    +E + SY +        ++SDHVF+G + +   N  K  D            F 
Sbjct: 1069 CILGGWTE-HGSYEA------REIKSDHVFIGYTSWL--NFMKSDDSIGCVATEASLRFQ 1119

Query: 763  I-----DRSCCEVKKCGIHFVHAQ 781
            +     + + C V KCG   +++ 
Sbjct: 1120 VTDGTREVTNCTVVKCGFSLIYSH 1143



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 20/202 (9%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           IE++    K  SN+  L +    +L ++S  + + Q L+SI +  C  L+ L     N++
Sbjct: 651 IEQIWEEEKDTSNLQWLDLNHSSKLHSLSG-LSRAQKLQSINLEGCTGLKTLPQVLQNME 709

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
                      L L+ C   ESLP        L +L + +C  F+       NL+    L
Sbjct: 710 SLMF-------LNLRGCTSLESLP--DITLVGLRTLILSNCSRFKEFKLIAKNLE---EL 757

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            +DGTAI+ELP  +G L  L  L+LK+C  L  +  SI  LK+++ I +S CS+L+ FPE
Sbjct: 758 YLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSLESFPE 817

Query: 373 I-------PFCNIDGSGIERIP 387
           +           +DG+ I++IP
Sbjct: 818 VNQNLKHLKTLLLDGTAIKKIP 839


>gi|15238695|ref|NP_197298.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9757889|dbj|BAB08396.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|91806874|gb|ABE66164.1| disease resistance protein [Arabidopsis thaliana]
 gi|332005108|gb|AED92491.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 780

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 125/227 (55%), Gaps = 10/227 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLL----KFCGSKNKCMV-HSLEGVPFTELRYFEWHQFP 55
           MS+I  ++ ++   F KM  L+ L     F     K  + H L+ +P  +LR   W  +P
Sbjct: 545 MSEIEDQVYVSEKAFEKMPNLQFLWLYKNFPDEAVKLYLPHGLDYLP-RKLRLLHWDSYP 603

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
            K L +    E LV L M  SK+ +LW+ +Q L SLKR+DL  S  +  +P+LS A NLE
Sbjct: 604 KKCLPSKFRPEFLVELTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIKDIPNLSRATNLE 663

Query: 115 ILDLGYCSSLTETHSS-IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
            L L +C +L    SS +Q L+KL+VLD+  C  L SLP +I+ K L  L +RGCS L N
Sbjct: 664 KLYLRFCKNLVIVPSSCLQNLHKLKVLDMSCCIKLKSLPDNINLKSLSVLNMRGCSKLNN 723

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
            P + S  ++  + L    IE++PS IK  S +  L +  CK L+ +
Sbjct: 724 FP-LISTQIQ-FMSLGETAIEKVPSVIKLCSRLVSLEMAGCKNLKTL 768



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 19/161 (11%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S+LE +   I  LKS++ +++S  + +K  P +       + +E+     L L  C  L 
Sbjct: 624 SKLEKLWEGIQPLKSLKRMDLSASTKIKDIPNLS----RATNLEK-----LYLRFCKNLV 674

Query: 401 SLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL 456
            +PSS C+ ++L  L+++D   C KL+ LPD + NL++L  L + G + +   P    Q+
Sbjct: 675 IVPSS-CL-QNLHKLKVLDMSCCIKLKSLPDNI-NLKSLSVLNMRGCSKLNNFPLISTQI 731

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
               L     ++ E +PS + +   L SLE+  CKN   LP
Sbjct: 732 QFMSLGE---TAIEKVPSVIKLCSRLVSLEMAGCKNLKTLP 769


>gi|357513689|ref|XP_003627133.1| Disease resistance protein [Medicago truncatula]
 gi|355521155|gb|AET01609.1| Disease resistance protein [Medicago truncatula]
          Length = 621

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 170/369 (46%), Gaps = 42/369 (11%)

Query: 14  TFSKMTELRLLKFCGSKNK----CMVHSLEGV-PFTE-LRYFEWHQFPLKTL-NILHWEN 66
            F  M +LR L+     +K     + HS +G+  F++ LRY EW+ +PLK L +    E 
Sbjct: 34  AFEMMVDLRFLRLYVPLDKKRLTTLNHSDQGIIQFSDKLRYIEWNGYPLKCLPDPFCAEF 93

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
           +V +++P S V  LW  +Q LV+L+ IDL   K L  LPDLS A  L+ L L  C S  E
Sbjct: 94  IVEIRLPHSSVEYLWHGMQELVNLEAIDLSECKHLFSLPDLSEATKLKSLYLSGCESFCE 153

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTL 186
            HSSI   + L  L LDRC  L SL +  H + L+++ + GCS+LK      S    ++L
Sbjct: 154 IHSSIFSKDTLVTLILDRCTKLKSLTSEKHLRSLQKINVYGCSSLKEFS--LSSDSIASL 211

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            L   GIE L  SI  +S +  L +   K   N+ + +  L  L  +R+  C  +    +
Sbjct: 212 DLRNTGIEILHPSINGISKLVWLNLEGLK-FANLPNELSCLGSLTKLRLSNCDIVTKSNL 270

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
                DG  S +     L LK C     LP+                         + +L
Sbjct: 271 EDI-FDGLGSLKI----LYLKYCGNLLELPTN------------------------ISSL 301

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES---IEISN 363
            +L  L +DGT +  LP  +  L+ L  L L NC +L  +     ++K   +     + N
Sbjct: 302 SSLYELRLDGTDVETLPSSIKLLSELGILWLDNCIKLHSLPELPLEIKEFHAENCTSLVN 361

Query: 364 CSNLKGFPE 372
            S+L+ F E
Sbjct: 362 LSSLRAFSE 370



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 181/388 (46%), Gaps = 57/388 (14%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIP---------------FCNIDGSGIER 385
           S +EY+   + +L ++E+I++S C +L   P++                FC I  S   +
Sbjct: 102 SSVEYLWHGMQELVNLEAIDLSECKHLFSLPDLSEATKLKSLYLSGCESFCEIHSSIFSK 161

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
                L L++C+KL+SL S     K L SL+ I+      L +   + +++  L +  TG
Sbjct: 162 DTLVTLILDRCTKLKSLTSE----KHLRSLQKINVYGCSSLKEFSLSSDSIASLDLRNTG 217

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR--LPDEIGN 502
           I  +  S+  ++ L  L L+    F +LP+ L    SLT L + +C    +  L D    
Sbjct: 218 IEILHPSINGISKLVWLNLEGLK-FANLPNELSCLGSLTKLRLSNCDIVTKSNLEDIFDG 276

Query: 503 LEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-- 559
           L  LK+L +K    + E+P ++  LSSL  L L   +++ +P S+  LS L  L L N  
Sbjct: 277 LGSLKILYLKYCGNLLELPTNISSLSSLYELRLDGTDVETLPSSIKLLSELGILWLDNCI 336

Query: 560 --NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLK 617
             ++L  +P  +    +     L   NL      LR+F   +  +     + +  +NC+ 
Sbjct: 337 KLHSLPELPLEIKEFHAENCTSLV--NLSS----LRAFSEKMEGK----EIYISFKNCVM 386

Query: 618 LDPNE--LSEIIKDGWM------------KQSVNGETYITKSMY--FPGNEIPKWFRHQS 661
           ++ N+  L  +++D  +            + S+N  +Y   S     PG+E+PK F++++
Sbjct: 387 MNSNQHSLDRVVEDVILTMKRAAHHNRSIRYSINAHSYSYNSAVVCLPGSEVPKEFKYRT 446

Query: 662 TGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           TGS I ++  Q   Y+   GF + VV++
Sbjct: 447 TGSEIDIRL-QDIPYS--TGFIYSVVIS 471


>gi|357513699|ref|XP_003627138.1| Resistance protein [Medicago truncatula]
 gi|355521160|gb|AET01614.1| Resistance protein [Medicago truncatula]
          Length = 1050

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 167/372 (44%), Gaps = 67/372 (18%)

Query: 7   EIQINPYTFSKMTELRLLKF---CGSKNKCMVHSLEGVPFT--ELRYFEWHQFPLKTL-N 60
           ++ I   TF +MT+L  L+F    G K    +H  +G+     +LRY EW ++P K+L +
Sbjct: 383 DLHIQAETFKEMTKLWFLRFYVPLGKKRSTTLHHDQGIMSISDKLRYLEWSEYPFKSLPH 442

Query: 61  ILHWENLVSLKMPGSKVTQLWDD-----------------------------VQNLVSLK 91
                 LV + +P S V  +WD                               Q LVSL+
Sbjct: 443 AFCANQLVEIHLPRSNVEHIWDGNQVCVSVCDFSLKFKWGKLLFNSSFCLDMFQELVSLE 502

Query: 92  RIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
            I+L   K L KLPDLS A  L+ L L  C SL      I   + L  + LDRC+ L SL
Sbjct: 503 TINLSECKKLIKLPDLSRAIKLKCLYLSGCQSLCAIEPHIFSKDTLVTVLLDRCEKLQSL 562

Query: 152 PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
            +  H +YL+++ + GCS LK     +      +L L   GI+ L SSI  +  +  L +
Sbjct: 563 KSEKHLRYLEKINVNGCSQLKEFSVFSDS--IESLDLSNTGIKILQSSIGRMRKLVWLNL 620

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
               RL+N+ + +  L+           +L  L + +CNI  T                +
Sbjct: 621 EGL-RLKNLPNELSNLR-----------SLTELWLCNCNIVTT---------------SK 653

Query: 272 PESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
            ES+  G    +SLT L + DC     +P  + +L +L  L +DG++++ LP  +  +  
Sbjct: 654 LESIFDG---LESLTRLYLKDCRYLIEIPANISSLSSLYELRLDGSSVKFLPANIKYVLR 710

Query: 332 LSKLELKNCSEL 343
           L  + L NC++L
Sbjct: 711 LEIISLDNCTKL 722



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 182/436 (41%), Gaps = 102/436 (23%)

Query: 281 MFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDGT----AIRELPEGLGQLALLS 333
           MF+ L SLE I   +C    +LPD L     L  L + G     AI   P    +  L++
Sbjct: 494 MFQELVSLETINLSECKKLIKLPD-LSRAIKLKCLYLSGCQSLCAIE--PHIFSKDTLVT 550

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPSS 389
            L L  C +L+ + S    L+ +E I ++ CS LK F      I   ++  +GI+ + SS
Sbjct: 551 VL-LDRCEKLQSLKSEK-HLRYLEKINVNGCSQLKEFSVFSDSIESLDLSNTGIKILQSS 608

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           + ++ K   L                  ++  +L+ LP+EL NL +L EL +    I   
Sbjct: 609 IGRMRKLVWLN-----------------LEGLRLKNLPNELSNLRSLTELWLCNCNI--- 648

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
                 +  SKL+    S F+ L       +SLT L + DC+  + +P  I +L  L  L
Sbjct: 649 ------VTTSKLE----SIFDGL-------ESLTRLYLKDCRYLIEIPANISSLSSLYEL 691

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
            + G++++ +P ++  +  LE + L +   L+I+PE            L  +  E   E 
Sbjct: 692 RLDGSSVKFLPANIKYVLRLEIISLDNCTKLRILPE------------LPPHIKEFHAEN 739

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
              L ++  L  F  +++    Y                  +  +NC  LD   L   ++
Sbjct: 740 CTSLVTISTLKTFSGSMNGKDIY------------------ISFKNCTSLDGPSLHGNLE 781

Query: 629 DGW-------------MKQSVNGETYITKSMYF--PGNEIPKWFRHQSTGSTISLKTPQP 673
           D                K S+    Y      F  PG  +P+ F++Q+  S I+++  + 
Sbjct: 782 DAISTMKSAAFHNILVRKYSLQTRNYNYNRAEFCLPGRRVPRQFQYQTKESCINIELSKL 841

Query: 674 TGYNKLMGFAFCVVVA 689
           + Y+  +GF F V++A
Sbjct: 842 S-YS--LGFIFSVIIA 854



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 25/220 (11%)

Query: 404 SSLC--MFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEGT----GIREVPKSLA 454
           SS C  MF+ L SLE I   +CKKL +LPD L     L+ L + G      I   P   +
Sbjct: 488 SSFCLDMFQELVSLETINLSECKKLIKLPD-LSRAIKLKCLYLSGCQSLCAIE--PHIFS 544

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           +  L  + L +C   +SL S     K L  LE I+     +L +     + ++ L +  T
Sbjct: 545 KDTLVTVLLDRCEKLQSLKSE----KHLRYLEKINVNGCSQLKEFSVFSDSIESLDLSNT 600

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL---ERIPERLDP 571
            I+ +  S+G++  L WL L    L+ +P  L+ L SL  L L N N+    ++    D 
Sbjct: 601 GIKILQSSIGRMRKLVWLNLEGLRLKNLPNELSNLRSLTELWLCNCNIVTTSKLESIFDG 660

Query: 572 LSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVD 611
           L SL  L L      +   YL   P +I S  +   L +D
Sbjct: 661 LESLTRLYL------KDCRYLIEIPANISSLSSLYELRLD 694


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 171/380 (45%), Gaps = 58/380 (15%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLE---GVPF--TELRYFEWHQFPLKTLNI 61
           E   NP  FSKM  L+LL          +H+L    G  F    LR  +W  +P K+L  
Sbjct: 549 EADWNPEAFSKMCNLKLL---------YIHNLRLSLGPKFLPDALRILKWSWYPSKSLPP 599

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
               +   L    S +  LW+ +  L  LK I L YS  L + PD +   NLE L L  C
Sbjct: 600 GFQPD--ELSFVHSNIDHLWNGI--LGHLKSIVLSYSINLIRTPDFTGIPNLEKLVLEGC 655

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           ++L + H SI  L +L++ +   CKS+ +LP+ ++ ++L+   + GCS LK +P+     
Sbjct: 656 TNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEVNMEFLETFDVSGCSKLKMIPEFVGQT 715

Query: 182 LR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            R S L L G  +E+LPSSI                 E++S S+  L  L  I I   P 
Sbjct: 716 KRLSKLCLGGTAVEKLPSSI-----------------EHLSESLVGLD-LSGIVIREQPY 757

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP-----SGQCMFKSLTSLEIIDCPN 295
             FL+           +   +S L L   PR    P     +    F SL  L + DC  
Sbjct: 758 SLFLK-----------QNVIASSLGL--FPRKSHHPLIPVLASLKHFSSLKELNLNDCNL 804

Query: 296 FE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            E  +P+++G+L +L  L + G     LP  +  L  L  + ++NC  L+ +      + 
Sbjct: 805 CEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPE--LPVS 862

Query: 355 SVESIEISNCSNLKGFPEIP 374
               +   NC++L+ FPE+P
Sbjct: 863 GSLRVTTVNCTSLQVFPELP 882



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 212/471 (45%), Gaps = 65/471 (13%)

Query: 353  LKSVESIEISNCSNL-KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
            + ++E + +  C+NL K  P I         ++R+   +     C  +++LPS + M + 
Sbjct: 644  IPNLEKLVLEGCTNLVKIHPSIAL-------LKRL--KIWNFRNCKSIKTLPSEVNM-EF 693

Query: 412  LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS-SFE 470
            L + ++  C KL+ +P+ +G  + L +L + GT + ++P S+  L+ S + L        
Sbjct: 694  LETFDVSGCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIR 753

Query: 471  SLPSRLYVSKSL--TSLEIIDCKNFMRLPDEIGNLEY---LKVLTIKGTAI--REVPESL 523
              P  L++ +++  +SL +   K+   L   + +L++   LK L +    +   E+P  +
Sbjct: 754  EQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDI 813

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
            G LSSLE L L  NN   +P S++ L  L S+ + N   L+++PE L    SL+   +  
Sbjct: 814  GSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPE-LPVSGSLRVTTVNC 872

Query: 583  NNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLRNCLKLDPNE------------LSEIIKD 629
             +L   PE        +P +   L   S++  NCL    N+            L E+I  
Sbjct: 873  TSLQVFPE--------LPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLLEVISL 924

Query: 630  GWMKQSVNG---------ETYIT---KSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN 677
                              ET+++    +   PG+EIP+WF +QS G +++ K P     +
Sbjct: 925  SLSLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPWDACNS 984

Query: 678  KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVES 737
            K +GFA C ++    +     E  + D    L  + C+  + G +      L  +   +S
Sbjct: 985  KWIGFAVCALIVPQDNPSAVPEDPDLDPDTCL--ISCNWSNYGINGVVGRGLC-VRQFDS 1041

Query: 738  DHVFL--GSSIFAGENSCKRSDEFFFHIDRS-----CCEVKKCGIHFVHAQ 781
            DH++L    S F    +C R   F F   R+     C +VKKCG+  ++ Q
Sbjct: 1042 DHLWLLVLPSPFRKPKNC-REVNFVFQTARAVGNNRCMKVKKCGVRALYEQ 1091


>gi|357499885|ref|XP_003620231.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495246|gb|AES76449.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1489

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 274/605 (45%), Gaps = 90/605 (14%)

Query: 14   TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEW-----HQFPLKTLNILHWENLV 68
             F KM  LR L F  S   C   + E +P   LR  E+     + +  +  N+  W+  +
Sbjct: 586  AFKKMKNLRTLIF--STPVCFSETSEHIP-NSLRVLEYSNRNRNYYHSRGSNLFEWDGFL 642

Query: 69   SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
              K    KV               ++     LLT++PD+S   NLE   +  C+SL    
Sbjct: 643  KKKFENMKV---------------LNYDCDTLLTRMPDISNLPNLEQFSIQDCTSLITID 687

Query: 129  SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
             S+ +L+KL++L L  C +L S+P  ++S  L  L L  C +L++ P + S  L     L
Sbjct: 688  ESVGFLSKLKILRLIGCNNLQSVP-PLNSASLVELNLSHCHSLESFPPVVSGFLGELKIL 746

Query: 189  LGVG---IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
              +G   I  +PS +  L ++ EL +  C  L++ S  +F  + L+++    C  L+   
Sbjct: 747  RVIGSSKIRLIPSLV--LPSLEELDLLDCTSLDSFSHMVFGDK-LKTMSFRGCYELR--S 801

Query: 246  MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL-G 304
            +P   +D          +L L  CP   S+   +    SL  L + +C   E  P  + G
Sbjct: 802  IPPLKLDSLE-------KLYLSYCPNLVSISPLK--LDSLEKLVLSNCYKLESFPSVVDG 852

Query: 305  NLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
             L  L  L + +   +R +P    +L  L KL+L +C  L  +S S  KL S+E++ +SN
Sbjct: 853  FLGKLKTLFVRNCHNLRSIPT--LKLDSLEKLDLSHCRNL--VSISPLKLDSLETLGLSN 908

Query: 364  CSNLKGFPEIPFCNIDG-------------SGIERIPS------SVLKLNKCSKLES-LP 403
            C  L+ FP +    +DG               +  IP+        L L+ C  L + LP
Sbjct: 909  CYKLESFPSV----VDGFLGKLKTLFVRNCHNLRSIPTLRLDSLEKLDLSHCRNLVNILP 964

Query: 404  SSLCMFKSLTSLEIIDCKKLERLPDEL-GNLEALEELRVEG-TGIREVPKSLAQLALSKL 461
              L    SL  L +  C KLE  P+ + G L  L+ L V+    +R +P +L   +L KL
Sbjct: 965  LKL---DSLEKLYLSSCYKLESFPNVVDGFLGKLKTLFVKSCHNLRSIP-ALKLDSLEKL 1020

Query: 462  KLKKCSSFESL-PSRLYVSKSLTSLEIIDCKNFMRLPDEI-GNLEYLKVLTIKGTA-IRE 518
             L  C +  S+ P +L    SL  L I +C      P  + G L+ LK L +K    +R 
Sbjct: 1021 YLSYCRNLVSISPLKL---DSLEKLVISNCYKLESFPGVVDGLLDKLKTLFVKNCHNLRS 1077

Query: 519  VPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDP-LSSL 575
            +P    +L SLE L LS  +NL  IP    +L SL +L LS+   LE  P  +D  L  L
Sbjct: 1078 IPAL--KLDSLEKLDLSHCHNLVSIPSL--KLDSLETLNLSDCYKLESFPSVVDGLLDKL 1133

Query: 576  KYLDL 580
            K+L++
Sbjct: 1134 KFLNI 1138



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 231/509 (45%), Gaps = 63/509 (12%)

Query: 87   LVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
            L  LK + ++    L  +P L L  +LE LDL +C +L     S   L+ LE L L  C 
Sbjct: 854  LGKLKTLFVRNCHNLRSIPTLKL-DSLEKLDLSHCRNLVSI--SPLKLDSLETLGLSNCY 910

Query: 147  SLTSLPTSIHS--KYLKRLVLRGCSNLKNLP--------KMTSCHLRSTLPLLGVGIEEL 196
             L S P+ +      LK L +R C NL+++P        K+   H R+ + +L + ++ L
Sbjct: 911  KLESFPSVVDGFLGKLKTLFVRNCHNLRSIPTLRLDSLEKLDLSHCRNLVNILPLKLDSL 970

Query: 197  PSSIKCLSNIGELLIYSCKRLENISSSIFK-LQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
                       +L + SC +LE+  + +   L  L+++ +  C NL+   +P+  +D   
Sbjct: 971  E----------KLYLSSCYKLESFPNVVDGFLGKLKTLFVKSCHNLR--SIPALKLDSLE 1018

Query: 256  SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL-GNLQALNRLII 314
                   +L L  C    S+   +    SL  L I +C   E  P  + G L  L  L +
Sbjct: 1019 -------KLYLSYCRNLVSISPLK--LDSLEKLVISNCYKLESFPGVVDGLLDKLKTLFV 1069

Query: 315  DGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
                 +R +P    +L  L KL+L +C  L  I S   KL S+E++ +S+C  L+ FP +
Sbjct: 1070 KNCHNLRSIPAL--KLDSLEKLDLSHCHNLVSIPS--LKLDSLETLNLSDCYKLESFPSV 1125

Query: 374  PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDEL 430
                +DG  ++++    L +  C  L ++P       SLTSLE  +   C +LE  P+ L
Sbjct: 1126 ----VDGL-LDKL--KFLNIENCIMLRNIPRL-----SLTSLEQFNLSCCYRLESFPEIL 1173

Query: 431  GNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            G +  +  L ++ T I+E+P     L   +            P+R  +   +  L I   
Sbjct: 1174 GEMRNIPRLHLDETPIKELPFPFQNLTQPQTYYPCNCGHSCFPNRASLMSKMAELSIQAE 1233

Query: 491  KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
            +     P +  +++Y+ V   K  +   + ++L   ++++ L L+++   +IP+S+ + +
Sbjct: 1234 EKMS--PIQSSHVKYICVKKCK-LSDEYLSKTLMLFANVKELHLTNSKFTVIPKSIEKCN 1290

Query: 551  SLVSLKLSN----NNLERIPERLDPLSSL 575
             L  L L +      ++ IP  L  LS++
Sbjct: 1291 FLWKLVLDDCKELEEIKGIPPCLRELSAV 1319


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 134/302 (44%), Gaps = 32/302 (10%)

Query: 46  LRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           LRY  WH +P  +L +      LV L MP S + +LW+  ++L  LKR+DL  SK LT+ 
Sbjct: 677 LRYLLWHGYPFTSLPSNFEPYYLVELNMPHSNIQRLWEGRKDLPYLKRMDLSNSKFLTET 736

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
           P       LE LD   C++L + H SI +L +L  L L  C SL +L   I S      V
Sbjct: 737 PKFFWTPILERLDFTGCTNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYSLRV 796

Query: 165 LR--GCSNLKNLPKMTSCHLRSTLPLLG-VGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
           LR  GC+ L+  P  T       L + G   +  +  SI  ++ +  L +  C  L  I 
Sbjct: 797 LRLSGCTKLEKTPDFTGASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIP 856

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
           +SI  +  L ++ +  C                         LKL   P  ++L S    
Sbjct: 857 NSINTITSLVTLDLRGC-------------------------LKLTTLPLGQNLSSSH-- 889

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            +SL  L++  C N  ++PD +G L  L RL + G     LP     L  LS L L +C 
Sbjct: 890 MESLIFLDVSFC-NLNKVPDAIGELHCLERLNLQGNNFDALPYTFLNLGRLSYLNLAHCH 948

Query: 342 EL 343
           +L
Sbjct: 949 KL 950



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 23/251 (9%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL-KGFPEIPFCN 377
           I+ L EG   L  L +++L N S+    +   F    +E ++ + C+NL +  P I    
Sbjct: 709 IQRLWEGRKDLPYLKRMDLSN-SKFLTETPKFFWTPILERLDFTGCTNLIQVHPSI---- 763

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLPSSLCM-FKSLTSLEIIDCKKLERLPDELGNLEAL 436
             G   E +    L L  CS L +L   +     SL  L +  C KLE+ PD  G    L
Sbjct: 764 --GHLTELV---FLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTKLEKTPDFTG-ASNL 817

Query: 437 EELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           E L ++G T +  V +S+  +A L  L L+ C     +P+ +    SL +L++  C    
Sbjct: 818 EYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRGCLKLT 877

Query: 495 RLPDEIG------NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
            LP  +G      ++E L  L +    + +VP+++G+L  LE L L  NN   +P +   
Sbjct: 878 TLP--LGQNLSSSHMESLIFLDVSFCNLNKVPDAIGELHCLERLNLQGNNFDALPYTFLN 935

Query: 549 LSSLVSLKLSN 559
           L  L  L L++
Sbjct: 936 LGRLSYLNLAH 946



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 31/245 (12%)

Query: 309 LNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIF-KLKSVESIEISNCSN 366
           L RL   G T + ++   +G L  L  L L+NCS L  +   I   L S+  + +S C+ 
Sbjct: 745 LERLDFTGCTNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTK 804

Query: 367 LKGFPE------IPFCNIDG-SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKS 411
           L+  P+      + + ++DG + +  +  S+        L L  C  L  +P+S+    S
Sbjct: 805 LEKTPDFTGASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITS 864

Query: 412 LTSLEIIDCKKLERLPDELG------NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLK 464
           L +L++  C KL  LP  LG      ++E+L  L V    + +VP ++ +L  L +L L+
Sbjct: 865 LVTLDLRGCLKLTTLP--LGQNLSSSHMESLIFLDVSFCNLNKVPDAIGELHCLERLNLQ 922

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
             ++F++LP        L+ L +  C      P    ++  LK L++ G+  + V  S  
Sbjct: 923 G-NNFDALPYTFLNLGRLSYLNLAHCHKLRAFP----HIPTLKDLSLVGSYFKLVSGSRD 977

Query: 525 QLSSL 529
             S L
Sbjct: 978 HRSGL 982


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 260/592 (43%), Gaps = 91/592 (15%)

Query: 43  FTELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
            + LR    H   L +L   I    +L  L++ G+++T +  ++  L +L+ + L  ++L
Sbjct: 27  LSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRL 86

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
           ++   ++    +L  L+L   + LT   + I  L  LE L L     LTS+P  I     
Sbjct: 87  MSVPAEIGQLTSLRELNL-NSNQLTNVPAEIGQLTSLEGLRL-YGNRLTSVPEEIGQLTS 144

Query: 161 KRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
             +++ G +   ++P        LR  L L G  +  +P+ I  L+++GEL + S  +L 
Sbjct: 145 LVVLVLGGNQFTSVPAEIGQLTALRE-LRLDGNRLTSVPAEIGQLTSLGELSL-SGNQLT 202

Query: 219 NISSSIFKLQFLESIRIH--RCPNL-----QFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
           ++ + I +L  L+ + ++  +  +L     Q   +    +D  +    P+   +L+    
Sbjct: 203 SVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGC 262

Query: 272 PESLPSGQCMFKSL-----TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
              L  G     ++       L++++      LP E+G L AL  L + G  +  +P  +
Sbjct: 263 RVDLDDGHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEI 322

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
           GQL  L    L + ++L  + + I +L S+E                             
Sbjct: 323 GQLTSLMTFGLSD-NKLTSVPAEIGQLTSLE----------------------------- 352

Query: 387 PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
              VL L+  ++L S+P+ +    SLT+L  +   +L  +P E+G L +L+ L +    +
Sbjct: 353 ---VLYLDH-NRLASMPAEIGRLTSLTTL-FLSSNRLTSVPAEIGQLTSLKGLHLSRNQL 407

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             VP ++  L  +  +L+ C               LT L          LP EIG L  L
Sbjct: 408 TSVPAAIRDLRAAGCRLEDCD--------------LTGL----------LPAEIGCLGAL 443

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           ++L + G  +  VP  +GQL+SLE L LS N L  +P  + QL+SL  L LS+N L  +P
Sbjct: 444 RLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLP 503

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYL------------RSFPTSIPSEFTSL 606
             +  L+SLK L L  N L  +P  +            R+  TS+P+E   L
Sbjct: 504 AEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEIGQL 555



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 172/395 (43%), Gaps = 85/395 (21%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL------------ 335
           LE+ D      +P ELG L AL +L + G  +  LP  +GQL  L  L            
Sbjct: 9   LELEDFDLTGVVPAELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPA 68

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           E+   + L  +S +  +L SV + EI   ++L+        N++ + +  +P+ + +L  
Sbjct: 69  EIGQLTALRELSLAANRLMSVPA-EIGQLTSLREL------NLNSNQLTNVPAEIGQLTS 121

Query: 396 C-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                   ++L S+P  +    SL  L ++   +   +P E+G L AL ELR++G  +  
Sbjct: 122 LEGLRLYGNRLTSVPEEIGQLTSLVVL-VLGGNQFTSVPAEIGQLTALRELRLDGNRLTS 180

Query: 449 VPKSLAQL-ALSKLKLKKCSSFESLPS-----------RLYVSK---------SLTSLE- 486
           VP  + QL +L +L L   +   S+P+            LY ++          LTSLE 
Sbjct: 181 VPAEIGQLTSLGELSLSG-NQLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEH 239

Query: 487 -IIDCKNFMRLPDEIGNL----------------------EYLKVLTIKGTAIREVPESL 523
            ++D      +P EI  L                        +K+  ++   I  +P  +
Sbjct: 240 LLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEGVTMENGRVVKLDLVEFGLIGALPAEV 299

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           G+LS+L WL L  NNL  +P  + QL+SL++  LS+N L  +P  +  L+SL+ L L  N
Sbjct: 300 GRLSALRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHN 359

Query: 584 NLDRIPEYLRSFP------------TSIPSEFTSL 606
            L  +P  +                TS+P+E   L
Sbjct: 360 RLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIGQL 394



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 202/483 (41%), Gaps = 66/483 (13%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P    ++T L  L+  G++   +   +  +    +     +QF      I     L  L+
Sbjct: 113 PAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEIGQLTALRELR 172

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP----DLSLAQNLEILDLGYCSSLTET 127
           + G+++T +  ++  L SL  + L  ++L T +P     L+L + LE+    Y + LT  
Sbjct: 173 LDGNRLTSVPAEIGQLTSLGELSLSGNQL-TSVPAEIGQLTLLKGLEL----YYNQLTSL 227

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS---NLKNLPKMTSCHLRS 184
            + I  L  LE L LD  + LTS+P  I     + L   GC    +  +   +T  + R 
Sbjct: 228 PAEIGQLTSLEHLLLDNNQ-LTSVPAEI-----RELRAAGCRVDLDDGHWEGVTMENGRV 281

Query: 185 T-LPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
             L L+  G I  LP+ +  LS +  L +       N++S   ++  L S+      + +
Sbjct: 282 VKLDLVEFGLIGALPAEVGRLSALRWLQLGG----NNLTSVPAEIGQLTSLMTFGLSDNK 337

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
              +P+         +  S E+      R  S+P+      SLT+L  +       +P E
Sbjct: 338 LTSVPA------EIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTL-FLSSNRLTSVPAE 390

Query: 303 LGNLQAL-------NRLIIDGTAIREL----------------PEGLGQLALLSKLELKN 339
           +G L +L       N+L     AIR+L                P  +G L  L  L+L  
Sbjct: 391 IGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAG 450

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            +EL  + + I +L S+E +E+S          +P      + +ER+  S       ++L
Sbjct: 451 -NELTSVPAEIGQLTSLEVLELSRNK----LTSVPVEIGQLTSLERLYLS------SNRL 499

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
            SLP+ +    SL  L  +D  +L  +P E+G L AL+   ++   +  VP  + QL   
Sbjct: 500 TSLPAEIGQLTSLKRL-YLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEIGQLLRG 558

Query: 460 KLK 462
           +L+
Sbjct: 559 RLR 561


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 172/421 (40%), Gaps = 72/421 (17%)

Query: 341  SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK-------- 392
            S++E +   ++ ++ ++ + +    NLK  P       D SG+  +   +LK        
Sbjct: 620  SKIEKLWHGVYFMEKLKYLNLKFSKNLKRLP-------DFSGVPNLEKLILKGCSILTEV 672

Query: 393  --------------LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
                          L  C  L+SLP  L M  SL  L +  C + + LP+    +E L  
Sbjct: 673  HLSLVHHKKVVVVSLKNCKSLKSLPGKLEM-SSLKKLILSGCSEFKFLPEFGEKMENLSI 731

Query: 439  LRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            L ++GT IR++P SL  L  L+ L LK C S   LP  ++   SL  L I  C    RLP
Sbjct: 732  LALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRLP 791

Query: 498  DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL---------VLSDNNLQI------- 541
            D +  ++ LK L    TAI E+P  +  L +L+ L          +S N           
Sbjct: 792  DGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQGPPAMSTNWFPFNWMFGGQ 851

Query: 542  -------IPESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
                   +P S   L SL  L LS  NL  E IP     LSSLK LDL  NN   IP  +
Sbjct: 852  SASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSLKSLDLTGNNFVIIPSSI 911

Query: 593  RSFPT------------SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
                              +  E  S  + +D  NC  L+  +   I  + +MK      T
Sbjct: 912  SKLSRLRFLCLNWCEQLQLLPELPSRIMQLDASNCDSLETRKFDPI--ESFMKGRCLPAT 969

Query: 641  YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFC--VVVACSVSECCRH 698
                 + FPG+EIP W   Q + S   +  P     ++ +GFA C  +V      E C H
Sbjct: 970  RFDMLIPFPGDEIPSWCVSQGSVSWAKVHIPNNLPQDEWVGFALCFQLVSYTFPPELCNH 1029

Query: 699  E 699
            E
Sbjct: 1030 E 1030



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 174/388 (44%), Gaps = 27/388 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E + +   FSK ++L+LL     +   +   L  +P   L+   W   PLKTL      +
Sbjct: 555 EARWSTEAFSKTSQLKLLNLNEVQ---LPLGLSCLP-CSLKVLRWRGCPLKTLAQTNQLD 610

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            +V +K+  SK+ +LW  V  +  LK ++LK+SK L +LPD S   NLE L L  CS LT
Sbjct: 611 EVVDIKLSHSKIEKLWHGVYFMEKLKYLNLKFSKNLKRLPDFSGVPNLEKLILKGCSILT 670

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCHLRS 184
           E H S+ +  K+ V+ L  CKSL SLP  +    LK+L+L GCS  K LP+        S
Sbjct: 671 EVHLSLVHHKKVVVVSLKNCKSLKSLPGKLEMSSLKKLILSGCSEFKFLPEFGEKMENLS 730

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G  I +LP S+  L  +  L +  CK L  +  +I  L  L  + I  C  L  L
Sbjct: 731 ILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRL 790

Query: 245 E--------MPSCNIDGTRSKEQPS--------SELKLKKCPRPESLPSGQCMFKSLTSL 288
                    +   + + T   E PS          L    C  P ++ +    F  +   
Sbjct: 791 PDGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQGPPAMSTNWFPFNWMFGG 850

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNCSELEYI 346
           +        RLP    +L +L  L +    + E  +P     L+ L  L+L   +    I
Sbjct: 851 Q--SASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNYFHHLSSLKSLDLTG-NNFVII 907

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIP 374
            SSI KL  +  + ++ C  L+  PE+P
Sbjct: 908 PSSISKLSRLRFLCLNWCEQLQLLPELP 935


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 197/428 (46%), Gaps = 53/428 (12%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P ELG L AL +L ++G  +  +P  +GQL  L++L L   ++L  + + I +L S+  
Sbjct: 20  VPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGE-NQLRSVPAEIGQLTSLTE 78

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKS 411
           +                 N+  + +  +P+ + +L    +L+       S+P+ L    S
Sbjct: 79  L-----------------NLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTS 121

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
           L  L I+D  +L  LP E+G L +L+EL +    +  +P  + QL +L ++ L   +   
Sbjct: 122 LERL-ILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYG-NQLT 179

Query: 471 SLPSRLYVSKSLTSLE--IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
           SLP+ +     LTSLE   +       +P E+  L  L+ L +K   +  +P  +GQL+S
Sbjct: 180 SLPAEI---GQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTS 236

Query: 529 LEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           L  L LS N L  +P  + QL+SL  L+L+ N L  +P  +  L+SLK L+L  N L  +
Sbjct: 237 LWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSL 296

Query: 589 PEYLR------------SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           P  +             +  TS+P+E   L    +    L+L  N+L+ +  +  +  S+
Sbjct: 297 PAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTE----LELHGNQLTSVPAEIGLLTSL 352

Query: 637 NGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV---ACSVS 693
            G  +    +     EI +    +  G   +L T  P    +L   A C V      +V 
Sbjct: 353 RGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAIRELRA-AGCTVGMDDGVTVD 411

Query: 694 ECCRHESV 701
           EC RH S 
Sbjct: 412 ECLRHLSA 419



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 162/330 (49%), Gaps = 30/330 (9%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           S+P+      SL  L++ +  +   +P EL  L +L RLI+D   +  LP  +GQL  L 
Sbjct: 88  SVPAEIGQLTSLVQLDL-EYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLK 146

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           +L L +  +L  + + I +L S+  +                 ++ G+ +  +P+ + +L
Sbjct: 147 ELGLHHI-QLTSLPAEIGQLTSLREV-----------------HLYGNQLTSLPAEIGQL 188

Query: 394 NKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
               KL        S+P+ L    SL  L++ D  +L  LP E+G L +L +L + G  +
Sbjct: 189 TSLEKLYLYGNQLTSVPAELWQLTSLEELDLKD-NQLTNLPAEIGQLTSLWQLHLSGNQL 247

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             VP  + QLA L++L+L   +   SLP+ +    SL  LE+ +      LP EIG L  
Sbjct: 248 TSVPAEIGQLASLTELELNG-NQLTSLPAEIGQLTSLKELEL-NGNQLTSLPAEIGQLTS 305

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L++L+++   +  VP  +GQL+SL  L L  N L  +P  +  L+SL  L   +N L  +
Sbjct: 306 LRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSL 365

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           P  +  L+SL+ L L  N L  +P  +R  
Sbjct: 366 PAEIGQLTSLRGLGLECNLLTSVPAAIREL 395


>gi|108740368|gb|ABG01540.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 196/407 (48%), Gaps = 59/407 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL  LP                       SI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRHCSNLVELP-----------------------SIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +  +LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID--- 379
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPEI   N+    
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEIS-TNVRALY 274

Query: 380 --GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
             G+ IE +P S+        L ++    L   P  L +  +L    I+  K L+ +P  
Sbjct: 275 LCGTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNL----ILSDKDLQEVPPL 330

Query: 430 LGNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
           +  +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 331 IKRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 188/430 (43%), Gaps = 76/430 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L  L  +DL    +L  LP    +  L++L L GCS+L                
Sbjct: 4   YLSVQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+ + +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       EL L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------ELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+   N+ AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
            + D                          ++EVP  + ++S L+ L+L       +L  
Sbjct: 318 ILSD------------------------KDLQEVPPLIKRISRLQTLILKGYRKVVSLPQ 353

Query: 542 IPESLNQLSS 551
           IP+SL  + +
Sbjct: 354 IPDSLKWIDA 363


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 146/587 (24%), Positives = 265/587 (45%), Gaps = 66/587 (11%)

Query: 12  PYTFSKMTELRLLKFCGSK-NKCMVHSLEGVPFTELR--YFEWHQFPLKTLNILHWENLV 68
           P    ++  L  L  C ++ N+      +    ++L   + +    P++   + H +   
Sbjct: 77  PPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQ--- 133

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
           SL +  +++T L   V  L  L+ +DL  + L +  P+++    L  LDL + + L+   
Sbjct: 134 SLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDL-FRNQLSGLP 192

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
             I  LN L+ L L    +L+SLP +I     LK+L LR  S                  
Sbjct: 193 PEIIKLNNLQTLGLGH-NTLSSLPATIAKLTNLKKLDLRATS------------------ 233

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH----------- 236
                ++ LP  I  L+ + EL + S  +L ++   I +L  L+S+R+            
Sbjct: 234 -----LKRLPPEILQLTKLQELDL-SDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAEL 287

Query: 237 -RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID--C 293
            +  +LQ L++ S N   +  +E    +   K      SL +   +   LT+L  +D   
Sbjct: 288 SQLTHLQELDL-SGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRS 346

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
                LP E+  L  L  L +    +  LP+ +G L  L KL L   ++L  +  +I KL
Sbjct: 347 TQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSK-TQLTNLPPAIMKL 405

Query: 354 KSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKC-------SKL 399
           K ++S++ S  + L   P        +   N+  + + ++P+ + +LN         +KL
Sbjct: 406 KRLQSLDFS-GNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKL 464

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
           +SLP  +    +L SL ++   +L  LP ++G L+ L+ L + G  +  +P  + +L+  
Sbjct: 465 DSLPKEIGQLNNLKSL-VLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSL 523

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
           K  + + +   SLP  +    +L SL +++ +    LP E+  L+ L+ L ++   +R +
Sbjct: 524 KSLILRSNRLSSLPPEIGKLHNLNSLNLVENQ-LSSLPIEMRKLQNLRELDLRNNRLRNL 582

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           P  +GQL SL  + LSDN L  +P+ + QL +L  L L  N L  +P
Sbjct: 583 PLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLSNLP 629



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 56/360 (15%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           LP      K L SL++        LP  +  L+ L  L +    ++ LP  + QL  L +
Sbjct: 122 LPMEMAQLKHLQSLDLT-ANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRR 180

Query: 335 LELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCNIDGSG 382
           L+L   ++L  +   I KL +++++             I+  +NLK        ++  + 
Sbjct: 181 LDLFR-NQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKL------DLRATS 233

Query: 383 IERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
           ++R+P  +L+L K        +KL SLP  +    +L SL +    +L   P EL  L  
Sbjct: 234 LKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRL-KFTQLSHPPAELSQLTH 292

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--- 492
           L+EL + G  +  +P+ +A+L   +      +S  +LP+   V   LT+L  +D ++   
Sbjct: 293 LQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPT---VITQLTTLRSLDLRSTQL 349

Query: 493 ----------------------FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
                                    LP EIG L +LK L +  T +  +P ++ +L  L+
Sbjct: 350 NSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQ 409

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L  S N L  +P  + Q+ SL  L LS N L ++P  +  L++L+ LDL EN LD +P+
Sbjct: 410 SLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPK 469



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 266/597 (44%), Gaps = 80/597 (13%)

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
           +LA     LDL   S LT+    I  L  LEVL+L R   L+ LP  I  + +    L  
Sbjct: 35  ALATQASQLDLQGLS-LTQLPLEIGQLKHLEVLNL-RDNQLSRLPPEI-GQLIHLTTLDL 91

Query: 168 CSN-LKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
           CSN L  LP ++T     S L L    +  LP  +  L ++  L + +  +L N+ SS+ 
Sbjct: 92  CSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDL-TANQLTNLPSSVT 150

Query: 226 KLQFLESI------------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR-- 271
           +L+ L+++             I +   L+ L++    + G      P   +KL       
Sbjct: 151 QLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGL-----PPEIIKLNNLQTLG 205

Query: 272 --PESLPSGQCMFKSLTSLEIID--CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
               +L S       LT+L+ +D    + +RLP E+  L  L  L +    +  LP  + 
Sbjct: 206 LGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIA 265

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDG 380
           QL  L  L LK  ++L +  + + +L  ++ +++S  S L   P        +   ++  
Sbjct: 266 QLVNLQSLRLK-FTQLSHPPAELSQLTHLQELDLSGNS-LSSLPREMAKLKKLQKLDLSY 323

Query: 381 SGIERIPSSVLKLN-------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
           + +  +P+ + +L        + ++L SLP  +    +L SL++ D   L  LP E+G L
Sbjct: 324 NSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYD-NPLTHLPQEIGTL 382

Query: 434 EALEELRVEGTGIREVPKSLAQL-----------ALSKLKLK------------KCSSFE 470
             L++L +  T +  +P ++ +L            LS L ++              +   
Sbjct: 383 THLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLS 442

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
            LP+ +    +L  L++ + K    LP EIG L  LK L ++   +  +P  +GQL +L+
Sbjct: 443 KLPADIGQLNNLQELDLRENK-LDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLK 501

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L +  N L  +P  + +LSSL SL L +N L  +P  +  L +L  L+L EN L  +P 
Sbjct: 502 SLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPI 561

Query: 591 YLRSFPTSIPSEFTSLRLSVDLRNC-LKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
            +R        +  +LR  +DLRN  L+  P E+ ++   G +  S N  + + K M
Sbjct: 562 EMR--------KLQNLR-ELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEM 609


>gi|22329895|ref|NP_174439.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|20466614|gb|AAM20624.1| disease resistance gene, putative [Arabidopsis thaliana]
 gi|34098813|gb|AAQ56789.1| At1g31540 [Arabidopsis thaliana]
 gi|332193248|gb|AEE31369.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 776

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 117/211 (55%), Gaps = 11/211 (5%)

Query: 7   EIQINPYTFSKMTELRLL--KFCGSKNKCMVH---SLEGVPFTELRYFEWHQFPLKTLNI 61
           E+ ++   F  M+ LR L  K  G K   + H   S + +P T L+   W +FP++ +  
Sbjct: 543 ELDVHERAFKGMSNLRFLEIKNFGLKEDGL-HLPPSFDYLPRT-LKLLCWSKFPMRCMPF 600

Query: 62  -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L+M  SK+ +LW+ V  L  LK +DL  S  L  +PDLS A NLEIL+L +
Sbjct: 601 GFRPENLVKLEMQYSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLSEATNLEILNLKF 660

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ LNKL  LD+  CKSL  LPT  + K L RL L  CS LK  PK ++ 
Sbjct: 661 CESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNLKSLDRLNLYHCSKLKTFPKFSTN 720

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
              S L L    IE+ PS++  L N+ E  I
Sbjct: 721 --ISVLNLNLTNIEDFPSNLH-LENLVEFRI 748



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 23/205 (11%)

Query: 282 FKSLTSLEIIDCPNFE------RLPDELGNL-QALNRLIIDGTAIRELPEGLGQLALLSK 334
           FK +++L  ++  NF        LP     L + L  L      +R +P G     L+ K
Sbjct: 551 FKGMSNLRFLEIKNFGLKEDGLHLPPSFDYLPRTLKLLCWSKFPMRCMPFGFRPENLV-K 609

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
           LE++  S+L  +   +  L  ++ +++   SNLK  P++     + + +E     +L L 
Sbjct: 610 LEMQ-YSKLHKLWEGVAPLTCLKEMDLHGSSNLKVIPDLS----EATNLE-----ILNLK 659

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSL 453
            C  L  LPSS+     L +L++++CK L+ LP    NL++L+ L +   + ++  PK  
Sbjct: 660 FCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGF-NLKSLDRLNLYHCSKLKTFPKFS 718

Query: 454 AQLALSKLKLKKCSSFESLPSRLYV 478
             +++  L L   ++ E  PS L++
Sbjct: 719 TNISVLNLNL---TNIEDFPSNLHL 740


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 247/576 (42%), Gaps = 81/576 (14%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           L+ L  L W     L +  +K+T+L   + + ++L   D   +KL    P +   Q L  
Sbjct: 101 LEDLQKLEW-----LWVKDNKLTKLPTKIFSCLNLVNFDASNNKLSAFPPGVEKLQKLRE 155

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           L + Y + LTE  S +  L  LE LD+   K L++ P  +   + L+ L ++  + L  +
Sbjct: 156 LYI-YGNQLTEVPSGVCSLPNLEELDVSNNK-LSTFPPGVEKLQKLRELYIQD-NQLTEV 212

Query: 175 PKMTSCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLIYSCK----RLENISSSIFKL 227
           P    C L   L LL VG   +   P  ++ L  + EL IY  K    +L      + KL
Sbjct: 213 PSGV-CSL-PHLELLTVGNNKLSAFPPGVEKLQKLRELYIYGVKCHNNKLSTFPPGVEKL 270

Query: 228 QFLESIRIHRCPNLQFLEMPS--CNI---------DGTRSKEQPSSELKLKKCPRP---- 272
           Q L  + I    + Q  E+PS  C++         +   SK  P  E KL+K  +     
Sbjct: 271 QKLRELYIQ---DNQLTEVPSGVCSLPHLELLTVGNNKLSKFPPGVE-KLQKLRKLYIYG 326

Query: 273 ---ESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
                +PS  C   SL +LE++   N      P  +  LQ L  L I    + E+P G+ 
Sbjct: 327 NQLTEVPSSVC---SLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVC 383

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISN------CSNLKGFPEIPFCNIDGS 381
            L  L  L + N ++L      + KL+ +  + I +       S +   P +    +  +
Sbjct: 384 SLPHLEVLSVYN-NKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNN 442

Query: 382 GIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
            + + P  V KL K  KL         +PSS+C   +L  L + +  KL   P  +  L+
Sbjct: 443 KLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYN-NKLSTFPPGVEKLQ 501

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            L+ L V  +   E P+ + QL   +               LY  ++         + F 
Sbjct: 502 KLKSLSVPASQFDEFPRQVLQLKTLE--------------ELYAGQA-------GGRKFD 540

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
            +PDE+GNL++L  L ++   +R +P ++  L +L  + L +N     PE L +L ++  
Sbjct: 541 IVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRVVQLWNNKFDTFPEVLCELPAMEK 600

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           L + NNN+ R+P  L     LK LD+  N L   P+
Sbjct: 601 LDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQ 636



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 154/584 (26%), Positives = 241/584 (41%), Gaps = 83/584 (14%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETH 128
           L +  +K+  + + +  L  L R+D  YS +LT LP  +S  Q L+ L + + ++L+E  
Sbjct: 41  LDVSNNKIISIPEAICRLQKLYRLD-AYSNMLTSLPQAISSLQGLKKLYV-HSNNLSELP 98

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL-----------PKM 177
             ++ L KLE L +   K LT LPT I S          C NL N            P +
Sbjct: 99  DGLEDLQKLEWLWVKDNK-LTKLPTKIFS----------CLNLVNFDASNNKLSAFPPGV 147

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
                   L + G  + E+PS +  L N+ EL + S  +L      + KLQ L  + I  
Sbjct: 148 EKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDV-SNNKLSTFPPGVEKLQKLRELYIQ- 205

Query: 238 CPNLQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI--IDC 293
             + Q  E+PS  C++        P  EL      +  + P G    + L  L I  + C
Sbjct: 206 --DNQLTEVPSGVCSL--------PHLELLTVGNNKLSAFPPGVEKLQKLRELYIYGVKC 255

Query: 294 PN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            N      P  +  LQ L  L I    + E+P G+  L  L  L + N ++L      + 
Sbjct: 256 HNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGN-NKLSKFPPGVE 314

Query: 352 KLKSVESIEISN------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SK 398
           KL+ +  + I         S++   P +   ++  + +   P  V KL K        ++
Sbjct: 315 KLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQ 374

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK---SLAQ 455
           L  +PS +C    L  L + +  KL   P  +  L+ L EL ++   + EVP    SL  
Sbjct: 375 LTEVPSGVCSLPHLEVLSVYN-NKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPH 433

Query: 456 LALSKLKLKKCSSF----ESLPS--RLYVSK-----------SLTSLEIIDCKN--FMRL 496
           L L  +   K S F    E L    +LY+             SL +LE++   N      
Sbjct: 434 LELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTF 493

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD---NNLQIIPESLNQLSSLV 553
           P  +  L+ LK L++  +   E P  + QL +LE L           I+P+ +  L  L 
Sbjct: 494 PPGVEKLQKLKSLSVPASQFDEFPRQVLQLKTLEELYAGQAGGRKFDIVPDEVGNLQHLW 553

Query: 554 SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L L NN L  +P  +  L +L+ + L+ N  D  PE L   P 
Sbjct: 554 FLALENNLLRTLPSTMSHLHNLRVVQLWNNKFDTFPEVLCELPA 597



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 24/176 (13%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           + L  +P+E+ ++  LE L V    I  +P+++ +L     KL +  ++         S 
Sbjct: 23  QGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQ----KLYRLDAY---------SN 69

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
            LTSL           P  I +L+ LK L +    + E+P+ L  L  LEWL + DN L 
Sbjct: 70  MLTSL-----------PQAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLT 118

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            +P  +    +LV+   SNN L   P  ++ L  L+ L ++ N L  +P  + S P
Sbjct: 119 KLPTKIFSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLP 174


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 36/330 (10%)

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
           R +S+P+       L  L + + P  + LP ELGN+Q L  L++D   +R LP  +G L 
Sbjct: 168 RLDSIPASIGTMTLLQELNLFENP-LKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALG 226

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----------FCNIDG 380
            L +L+L + + +E + +SI  L S+ ++ +++       PEIP          F ++ G
Sbjct: 227 QLRELQLGD-NRIENLPASIGSLTSLNTLILTD----NNLPEIPAEIGYLTNLTFLSLSG 281

Query: 381 SGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
           + I  +P   L++   S L +L               +    L  LP  +G+L  L+ L 
Sbjct: 282 NPITSLP---LEIGGLSALRALN--------------LAKNSLISLPVSIGDLALLQVLH 324

Query: 441 VEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           +    +  +P+S+  L AL+ L+L   ++  SLP  + V  SLT L ++D      LP  
Sbjct: 325 LHENELEALPESIGDLSALTDLRLDH-NNLTSLPPEVGVMSSLTEL-LLDGNQLNTLPLS 382

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
           IG L  L+VL + G  +  +P  +  +++L  L + DN L ++PE +  L++L  L LSN
Sbjct: 383 IGRLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSN 442

Query: 560 NNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           N L  +P  +  L SL  L + +NNL   P
Sbjct: 443 NELTVLPANMTRLVSLNELWIKDNNLKSHP 472



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 184/385 (47%), Gaps = 51/385 (13%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           LP+   M  SL +L + D      LP  +G L  +  L +D   +  LP   G +  L  
Sbjct: 11  LPASIGMLSSLATLWV-DHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMTALVT 69

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
           L + + + L+Y+ +SI  L ++  +++ N + L+  P+         G  R+ S +    
Sbjct: 70  LTISH-NLLKYLPTSIGNLPNLRILDL-NHNMLRSLPQT-------VGFLRLMSEL---- 116

Query: 395 KCS--KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           KC+  +L ++P+++    +L  L++     +  LP E+G L  +++L +    +  +P S
Sbjct: 117 KCNANQLTTVPTTIGECTALRQLDL-SFNAISALPLEIGRLTKMKQLLLNNNRLDSIPAS 175

Query: 453 LAQLALSKLKLKKCSSFES----LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           +  + L    L++ + FE+    LP+ L   + L +L ++D      LP  IG L  L+ 
Sbjct: 176 IGTMTL----LQELNLFENPLKGLPTELGNIQKLKTL-VVDVNQLRTLPATIGALGQLRE 230

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L +    I  +P S+G L+SL  L+L+DNNL  IP  +  L++L  L LS N +  +P  
Sbjct: 231 LQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLE 290

Query: 569 LDPLSSLKYLDLFENNLDRIP----------------EYLRSFPTSIP--SEFTSLRLSV 610
           +  LS+L+ L+L +N+L  +P                  L + P SI   S  T LRL  
Sbjct: 291 IGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRL-- 348

Query: 611 DLRNCLKLDP-----NELSEIIKDG 630
           D  N   L P     + L+E++ DG
Sbjct: 349 DHNNLTSLPPEVGVMSSLTELLLDG 373



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 42/335 (12%)

Query: 282 FKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK- 338
           F  +T+L  +   +   + LP  +GNL  L  L ++   +R LP+ +G L L+S  ELK 
Sbjct: 61  FGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMS--ELKC 118

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK 398
           N ++L  + ++I +  ++  +++S       F  I    ++   + ++   +L  N+   
Sbjct: 119 NANQLTTVPTTIGECTALRQLDLS-------FNAISALPLEIGRLTKMKQLLLNNNR--- 168

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA- 457
           L+S+P+S+     L  L + +   L+ LP ELGN++ L+ L V+   +R +P ++  L  
Sbjct: 169 LDSIPASIGTMTLLQELNLFE-NPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQ 227

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L +L+L   +  E+LP+ +    SL +L + D  N   +P EIG L  L  L++ G  I 
Sbjct: 228 LRELQLGD-NRIENLPASIGSLTSLNTLILTD-NNLPEIPAEIGYLTNLTFLSLSGNPIT 285

Query: 518 EVPESLGQLSSLEWLVLS-----------------------DNNLQIIPESLNQLSSLVS 554
            +P  +G LS+L  L L+                       +N L+ +PES+  LS+L  
Sbjct: 286 SLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTD 345

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L+L +NNL  +P  +  +SSL  L L  N L+ +P
Sbjct: 346 LRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLP 380



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 198/416 (47%), Gaps = 39/416 (9%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCPNLQFLEMP 247
           I  LP+SI  LS++  L +    ++  +  SI +L  ++S+     +++  PN QF +M 
Sbjct: 8   IVHLPASIGMLSSLATLWV-DHNQISELPPSIGQLNNVQSLALDFNQLNSLPN-QFGDMT 65

Query: 248 SC---NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS----LEII-----DCPN 295
           +     I     K  P+S   +   P    L     M +SL      L ++     +   
Sbjct: 66  ALVTLTISHNLLKYLPTS---IGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQ 122

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              +P  +G   AL +L +   AI  LP  +G+L  + +L L N + L+ I +SI  +  
Sbjct: 123 LTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNN-NRLDSIPASIGTMTL 181

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++ + +     LKG P       +   I+++ + V+ +N+   L +LP+++     L  L
Sbjct: 182 LQELNLFENP-LKGLPT------ELGNIQKLKTLVVDVNQ---LRTLPATIGALGQLREL 231

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
           ++ D  ++E LP  +G+L +L  L +    + E+P  +  L  L+ L L   +   SLP 
Sbjct: 232 QLGD-NRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSG-NPITSLPL 289

Query: 475 RLYVSKSLTSLEIIDCKN-FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
            +    +L +L +   KN  + LP  IG+L  L+VL +    +  +PES+G LS+L  L 
Sbjct: 290 EIGGLSALRALNL--AKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLR 347

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L  NNL  +P  +  +SSL  L L  N L  +P  +  L+ L+ L+L  N L  +P
Sbjct: 348 LDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLP 403



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 3/179 (1%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
           I   ++  LP  +G L +L  L V+   I E+P S+ QL   +      +   SLP++  
Sbjct: 3   IADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFG 62

Query: 478 VSKSLTSLEIIDCKNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              +L +L I    N ++ LP  IGNL  L++L +    +R +P+++G L  +  L  + 
Sbjct: 63  DMTALVTLTI--SHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNA 120

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           N L  +P ++ + ++L  L LS N +  +P  +  L+ +K L L  N LD IP  + + 
Sbjct: 121 NQLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTM 179



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 22/164 (13%)

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
           I     + LP  IG L  L  L +    I E+P S+GQL++++ L L  N L  +P    
Sbjct: 3   IADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFG 62

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE---YLR----------- 593
            +++LV+L +S+N L+ +P  +  L +L+ LDL  N L  +P+   +LR           
Sbjct: 63  DMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQ 122

Query: 594 --SFPTSIPSEFTSLRLSVDLR-NCLKLDPNELSEIIKDGWMKQ 634
             + PT+I  E T+LR  +DL  N +   P E+  + K   MKQ
Sbjct: 123 LTTVPTTI-GECTALR-QLDLSFNAISALPLEIGRLTK---MKQ 161



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 47/88 (53%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           ++I    I  +P S+G LSSL  L +  N +  +P S+ QL+++ SL L  N L  +P +
Sbjct: 1   MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSFP 596
              +++L  L +  N L  +P  + + P
Sbjct: 61  FGDMTALVTLTISHNLLKYLPTSIGNLP 88


>gi|108740370|gb|ABG01541.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 195/409 (47%), Gaps = 63/409 (15%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL  LP                       SI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRHCSNLVELP-----------------------SIGNA 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 104 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 156

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + DC +  +LP  +GN   L  + +   + + EL
Sbjct: 157 LDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVEL 216

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------F 375
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPEI         
Sbjct: 217 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEISTNVRALYL 275

Query: 376 CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           C   G+ IE +P S+        L ++    L   P  L +  +L    I+  K L+ +P
Sbjct: 276 C---GTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNL----ILSDKDLQEVP 328

Query: 428 DELGNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
             +  +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 329 PLIKRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 188/430 (43%), Gaps = 76/430 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L  L  +DL    +L  LP    +  L++L L GCS+L                
Sbjct: 4   YLSVQPLQNLRQMDLSYSVNLKELPDLSTAINLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+ + +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       EL L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------ELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+   N+ AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
            + D                          ++EVP  + ++S L+ L+L       +L  
Sbjct: 318 ILSD------------------------KDLQEVPPLIKRISRLQTLILKGYRKVVSLPQ 353

Query: 542 IPESLNQLSS 551
           IP+SL  + +
Sbjct: 354 IPDSLKWIDA 363


>gi|108738543|gb|ABG00804.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 217/539 (40%), Gaps = 121/539 (22%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L
Sbjct: 54  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRST-LPLLGVGIEELPSSIKCLSNI 206
           +     +   K L++L L GCS+L  LP+          L L G  I+ LP SI  L N+
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPEXXGAMTXXXELLLXGTAIKNLPESINRLQNL 173

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
             L +   K  E                           +P C       ++    +  L
Sbjct: 174 XILSLRGXKXXE---------------------------LPLCXXXXKSXEKLYLDDTAL 206

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
                  +LPS     K+L  L +  C +  ++PD +  L++L +L I+G+A+ ELP   
Sbjct: 207 X------NLPSSIGDLKNLQDLHLXRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKP 260

Query: 327 GQLALLSKLELKNCSELEYISSSIFK-----------------------LKSVESIEISN 363
             L  L      +C  L+ + SSI +                       L  +  +E+ N
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 364 CSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           C  LK  P+       +   N++GS IE +P    KL K                L  L 
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK----------------LVELR 364

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
           + +CK L+RLP+  G+L++L  L ++ T + E+P+S   L+                   
Sbjct: 365 MSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS------------------- 405

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA----IREVPESLGQLSSLEWL 532
               +L  LE++  K   R+ +            + GT+      EVP S  +L  LE L
Sbjct: 406 ----NLMVLEMLK-KPLFRISES----------NVPGTSEEPRFVEVPNSFSKLLKLEEL 450

Query: 533 VLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIP 589
                 +   IP+ L +LS L+ L L NN    +P  L  LS+L+ L L +   L R+P
Sbjct: 451 DACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLP 509


>gi|357468491|ref|XP_003604530.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505585|gb|AES86727.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 950

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 132/262 (50%), Gaps = 19/262 (7%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMV---HSLEGVPFTELRYFEWHQFPLKTL-N 60
           N +++++P+ F KMT L+ L F    +  +      LE  P T LRY  W  +PLK+   
Sbjct: 385 NRKLKLSPHVFDKMTNLQFLNFWVDFDDYLDLFPQGLESFP-TGLRYLHWVCYPLKSFPE 443

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L +  S++ +LW  VQNLV+LK + +  + L  +LPD S A NL++L +  
Sbjct: 444 KFSAENLVILDLYLSRMEKLWCGVQNLVNLKEVTISLASL-KELPDFSKATNLKVLTVTV 502

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C +L   H SI  L KL  LDL  C+SLT+  ++ +   L  L L GC  L       + 
Sbjct: 503 CPNLESVHPSIFTLEKLVRLDLGGCRSLTTFTSNSNLSSLHYLSLSGCEKLSEFS--VTL 560

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                L L    I  LPSS  C SN+ E L+    ++E+I SSI  L  L  + I  C  
Sbjct: 561 ENIVELDLSWCPINALPSSFGCQSNL-ETLVLKATQIESIPSSIKDLTRLRKLNICGCKK 619

Query: 241 L----------QFLEMPSCNID 252
           L          + L++ SCNI+
Sbjct: 620 LLALPELPLSVEILDLRSCNIE 641



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 195/477 (40%), Gaps = 116/477 (24%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            E+L   + NL  L  + I   +++ELP+   +   L  L +  C  LE +  SIF L+ 
Sbjct: 460 MEKLWCGVQNLVNLKEVTISLASLKELPD-FSKATNLKVLTVTVCPNLESVHPSIFTLEK 518

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           +  +++  C +L  F          S         L L+ C KL     +L   +++  L
Sbjct: 519 LVRLDLGGCRSLTTFT---------SNSNLSSLHYLSLSGCEKLSEFSVTL---ENIVEL 566

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
           ++  C  +  LP   G    LE L ++ T I  +P S+  L     +L+K          
Sbjct: 567 DLSWCP-INALPSSFGCQSNLETLVLKATQIESIPSSIKDLT----RLRK---------- 611

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
                    L I  CK  + LP                    E+P       S+E L L 
Sbjct: 612 ---------LNICGCKKLLALP--------------------ELP------LSVEILDLR 636

Query: 536 DNNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
             N++IIP S+  L+ L  L +  +N L  +PE    LSS   +++   + D +   L  
Sbjct: 637 SCNIEIIPSSIKNLTRLRKLDIRFSNKLLALPE----LSS--SVEILLVHCDSLKSVL-- 688

Query: 595 FPTSIPSEFTSLRLSVDLRNCLKLDP-------------------NELSEIIKDGWMKQS 635
           FP+++  +F   +  V   NCL LD                     +LS +  D +++  
Sbjct: 689 FPSTVAEQFKENKKEVKFWNCLNLDERSLINIGLNLQINLMKFAYQDLSTVEHDDYVETY 748

Query: 636 V----NGETYITKSMY-FPGNEIPKWFRHQSTGSTIS---LKTPQPTGYNKLMGFAFCVV 687
           V    N ++Y  +++Y + G+ +P WF +++T  T +   +    P   + L+GF FC +
Sbjct: 749 VDYKDNFDSY--QALYVYSGSSVPDWFEYKTTNETTNDDMIVDLSPLHLSPLLGFVFCFI 806

Query: 688 VACSVSECCRHESVEDDRKCNL----FDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
           +          E+ E D+K        DV  D   +G++ YT   L  + + +SDHV
Sbjct: 807 LP---------ENEEYDKKVEFNITTIDVEGDGEKDGFNIYTD--LEHVFNTQSDHV 852


>gi|296090595|emb|CBI40964.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 151/347 (43%), Gaps = 67/347 (19%)

Query: 32  KCMVHSLEGVPF--TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLV 88
           +C +H  +   F   ELRY  W ++P ++L +    ENLV   MP S +TQLW   +   
Sbjct: 2   QCKLHISDDFKFHYDELRYLHWDEYPCESLPSDFESENLVHFCMPRSHLTQLWKGQKVFG 61

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
            L+ +D+ YS+ L K PD S A NLE+L L  C++L + H S+ YL+KL +L+++ C +L
Sbjct: 62  HLEFVDVSYSQYLKKTPDFSRATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNMENCINL 121

Query: 149 TSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGE 208
             LP+      L+  +L GCS L+ L ++        +P L         S  CL     
Sbjct: 122 EHLPSIRWLVSLRTFILSGCSKLEKLQEVP-----QHMPYL---------SKLCLDGTAI 167

Query: 209 LLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK 268
                   L N   +   L  L  +                N D +  ++Q SS + L+ 
Sbjct: 168 TDFSGWSELGNFQENSGNLDCLSEL----------------NSDDSTIRQQHSSSVVLRN 211

Query: 269 -------CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
                   PR     S  C   SLT L                         + GT+I  
Sbjct: 212 HNASPSSAPRRSRFISPHCTLTSLTYLN------------------------LSGTSIIH 247

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           LP  L +L++L +LEL NC  L+ +        S+E +  SNC++L+
Sbjct: 248 LPWNLERLSMLKRLELTNCRRLQALP---VLPSSIECMNASNCTSLE 291



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 196/481 (40%), Gaps = 88/481 (18%)

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNKC------SKLESLPSSLCMFKSLTSLEIIDCKKL 423
           + E+ + + D    E +PS     N        S L  L     +F  L  +++   + L
Sbjct: 15  YDELRYLHWDEYPCESLPSDFESENLVHFCMPRSHLTQLWKGQKVFGHLEFVDVSYSQYL 74

Query: 424 ERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           ++ PD       LE L ++G T +R+V  SL  L+ L  L ++ C + E LPS  ++  S
Sbjct: 75  KKTPD-FSRATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLPSIRWLV-S 132

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP---------ESLGQLSSLEWL 532
           L +  +  C    +L +   ++ YL  L + GTAI +           E+ G L  L  L
Sbjct: 133 LRTFILSGCSKLEKLQEVPQHMPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLSEL 192

Query: 533 VLSDN-------------NLQIIPESLNQ----------LSSLVSLKLSNNNLERIPERL 569
              D+             N    P S  +          L+SL  L LS  ++  +P  L
Sbjct: 193 NSDDSTIRQQHSSSVVLRNHNASPSSAPRRSRFISPHCTLTSLTYLNLSGTSIIHLPWNL 252

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSI----PSEFTSLRL----------------- 608
           + LS LK L+L   N  R+ + L   P+SI     S  TSL L                 
Sbjct: 253 ERLSMLKRLEL--TNCRRL-QALPVLPSSIECMNASNCTSLELISPQSVFKRFGGFLFGN 309

Query: 609 SVDLRNC---LKLDPNEL-SEIIKDGWMKQSV--NGETYITKSMYFPGNEIPKWFRHQST 662
              LRNC   ++ D   + S  +   W       +    I  S  FPG+EIP WFRH S 
Sbjct: 310 CFKLRNCHSKMEHDVQSVASHAVPGTWRDTYAIWHPNVAIPFSTVFPGSEIPDWFRHHSQ 369

Query: 663 GSTISLKTPQPTGY--NKLMGFAFCVVVACSVSECCRHESVEDDRKCNL--FDVVCDRRS 718
           G  I+++ P P  Y  +  +GFA   V+A       +H+S      C+L   D+  +  S
Sbjct: 370 GHEINIEVP-PDWYINSNFLGFALSAVMA------PQHDSRAWCMYCDLDTHDLNSNSNS 422

Query: 719 EGYDSYTSSYLGKISH--VESDHVFLG--SSIFAGENSCKRSDEFFFHIDRSCCEVKKCG 774
               S+  S+  ++    +ESDHV+L    S F+         +F F     C  VK CG
Sbjct: 423 HRICSFFGSWTYQLQRTPIESDHVWLAYVPSFFSFSREKWSHIKFSFSSSGGCV-VKSCG 481

Query: 775 I 775
            
Sbjct: 482 F 482


>gi|108740362|gb|ABG01537.1| disease resistance protein [Arabidopsis thaliana]
          Length = 415

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 201/416 (48%), Gaps = 52/416 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A NL  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C SL  LP+   +  L++L+LR CSNL                       ELPSSI   
Sbjct: 67  GCSSLVELPSFGDAINLQKLLLRYCSNLV----------------------ELPSSIGNA 104

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL +Y C  L  + SSI     L  + ++ C NL  LE+PS   +    +     +
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----K 157

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IREL 322
           L L++C +   LPS      +L +L + D  +   LP  +GN   L  + +   + + EL
Sbjct: 158 LDLRRCAKLLELPSSIGNAINLQNLLLDDXSSLLELPSSIGNATNLVYMNLSNCSNLVEL 217

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  +G L  L +L LK CS+LE +  +I  L+S++ + +++CS LK FPE          
Sbjct: 218 PLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDILVLNDCSMLKRFPE---------- 266

Query: 383 IERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              I ++V  L  C + +E +P S+  +  L  L +     L   P     L+ +  L +
Sbjct: 267 ---ISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDL 320

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            G  I+EVP  + +++ L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 321 NGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 373



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 163/372 (43%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SSI   
Sbjct: 45  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAINLQKLLLRYCSNLVELPSSIGNA 104

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  LDL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 105 INLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 164

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+     L  + SSI     L  + +  C NL  L +
Sbjct: 165 KLL-----ELPSSIGNAINLQNLLLDDXSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 219

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP      +SL  L + DC   +R P+   N+
Sbjct: 220 SIGNL-------QKLQELILKGCSKLEDLPI-NINLESLDILVLNDCSMLKRFPEISTNV 271

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 272 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 304

Query: 367 LKGFPE----IPFCNIDGSGIERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP     I   +++G  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 305 LVEFPHVLDIITNLDLNGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 361

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 362 IDAEDCESLERL 373



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 76/371 (20%)

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
           V ++ELP  +    N+ +L++ +C  L  + S I     LE + ++ C +L  +E+PS  
Sbjct: 22  VNLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSL--VELPSF- 77

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             G     Q   +L L+ C     LPS      +L  L++  C +  RLP  +GN  A+N
Sbjct: 78  --GDAINLQ---KLLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGN--AIN 130

Query: 311 RLIIDGTA---IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES--------- 358
            LI+D      + ELP  +G    L KL+L+ C++L  + SSI    ++++         
Sbjct: 131 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDXSSL 190

Query: 359 ---------------IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                          + +SNCSNL   P      +    ++++   +LK   CSKLE LP
Sbjct: 191 LELPSSIGNATNLVYMNLSNCSNLVELP------LSIGNLQKLQELILK--GCSKLEDLP 242

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            ++ + +SL  L + DC  L+R P+   N+ AL    + GT I EVP S+   +  +L  
Sbjct: 243 ININL-ESLDILVLNDCSMLKRFPEISTNVRAL---YLCGTAIEEVPLSIR--SWPRLDE 296

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              S F++L                    F  + D I NL+      + G  I+EVP  +
Sbjct: 297 LLMSYFDNL------------------VEFPHVLDIITNLD------LNGKEIQEVPPLI 332

Query: 524 GQLSSLEWLVL 534
            ++S L+ L+L
Sbjct: 333 KRISRLQTLIL 343



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 24  LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 78

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS+    +L  L++  C  L RLP  +GN   L  
Sbjct: 79  DAINLQK-----LLLRYCSNLVELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLI 133

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS----------------- 479
           L + G + + E+P S+   + L KL L++C+    LPS +  +                 
Sbjct: 134 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDXSSLLEL 193

Query: 480 -------KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
                   +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 194 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPINI-NLESLDI 252

Query: 532 LVLSD 536
           LVL+D
Sbjct: 253 LVLND 257


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 271/595 (45%), Gaps = 99/595 (16%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            L  L + G+    L D+++ L +++ + L  + + T  P +     LE LDL     + 
Sbjct: 203 QLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQLEKLDLSGNKQI- 261

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-----------HSKYLKRLVLR--GCSNLK 172
           +    +  L  L+VL L R + + S+P  +            S  L+ L ++    S +K
Sbjct: 262 KLSDQLLGLTNLKVLRLSRTE-MASVPEVVWKLTHLEELHLLSNPLQTLSVKVGQLSRIK 320

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
            L  +++CHLR+           LP  +  L+ +  L + + + L+ +   ++++     
Sbjct: 321 RL-DLSNCHLRT-----------LPPEVGTLTQLERLKVANNRALQTLPGELWQVT---- 364

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
                  N++ L++ +C +                      +LP       +LT LE +D
Sbjct: 365 -------NIKRLDLSNCQL---------------------HTLPPE---VGTLTQLEWLD 393

Query: 293 CP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
                 + LP ELG++  + RL +    +  LP  +G+L  L  L++KN + L+ +   +
Sbjct: 394 LSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKN-NPLQTLPGEL 452

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
            ++ S++ +++SNC      PE+       + +ER+  +       + L++LP  L    
Sbjct: 453 GQVASIKHLDLSNCWLHTLPPEVGTL----TQLERLKVA------NNPLQTLPGELWKVT 502

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           ++  L++  C  L+ LP E+G L  LE L ++G  ++ +PK + QL A+  L L  C   
Sbjct: 503 NIKRLDLSSCW-LDTLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQ-L 560

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            +LP  +   K L  L +        LP ++ NL ++K + +    ++ +P   G+L+ L
Sbjct: 561 HTLPPEMGTLKQLEWLSL-QGNPLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQL 619

Query: 530 EWLVLSDNN-LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
           E L LS N  LQ +P    QL+++  L LSN +L+ +P  +  L  ++YL L  N L ++
Sbjct: 620 ERLYLSCNGELQTLPT--RQLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKL 677

Query: 589 PEYLRSFP------------TSIPSE---FTSLRLSVDLR-NCLKLDPNELSEII 627
           P  +R                 +P E    T LR  +DLR N L++ P E+++ I
Sbjct: 678 PPEVRHLTNIKHLDMSNCRLNELPIEVGTMTQLR-QLDLRYNQLQMLPVEITQHI 731



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 169/342 (49%), Gaps = 28/342 (8%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++G L  + RL +    +R LP  +G L  L +L++ N   L+ +   ++++ +++ +++
Sbjct: 312 KVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTNIKRLDL 371

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
           SNC      PE+         + ++    L  N    L++LP  L    ++  L++  C+
Sbjct: 372 SNCQLHTLPPEV-------GTLTQLEWLDLSFNT---LQTLPRELGHVTNIKRLDLSHCQ 421

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSK 480
            L  LP ++G L  L+ L+V+   ++ +P  L Q+A +  L L  C    +LP  +    
Sbjct: 422 -LHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCW-LHTLPPEV---G 476

Query: 481 SLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
           +LT LE +   N     LP E+  +  +K L +    +  +P  +G L+ LEWL L  N 
Sbjct: 477 TLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNP 536

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
           LQ++P+ + QL+++  L LS   L  +P  +  L  L++L L  N L  +P+ + +    
Sbjct: 537 LQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQVEN---- 592

Query: 599 IPSEFTSLRLSVDLRNC-LKLDPNELSEIIKDGWMKQSVNGE 639
                T ++  ++L +C L++ P E  ++ +   +  S NGE
Sbjct: 593 ----LTHIKW-MNLSHCRLQMLPPEFGKLTQLERLYLSCNGE 629



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 166/328 (50%), Gaps = 19/328 (5%)

Query: 278 GQCMFKSLTSLEIIDCPNFER--LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
           G+ +F+  + LE +D     +  LPDEL  L+ +  L ++   +  +P  + +L+ L KL
Sbjct: 194 GRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQLEKL 253

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF-------CNIDGSGIERIPS 388
           +L    +++ +S  +  L +++ + +S  + +   PE+ +        ++  + ++ +  
Sbjct: 254 DLSGNKQIK-LSDQLLGLTNLKVLRLSR-TEMASVPEVVWKLTHLEELHLLSNPLQTLSV 311

Query: 389 SVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            V +L++  +L+       +LP  +     L  L++ + + L+ LP EL  +  ++ L +
Sbjct: 312 KVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTNIKRLDL 371

Query: 442 EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
               +  +P  +  L   +      ++ ++LP  L    ++  L++  C+    LP ++G
Sbjct: 372 SNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQ-LHTLPPQVG 430

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
            L +LK L +K   ++ +P  LGQ++S++ L LS+  L  +P  +  L+ L  LK++NN 
Sbjct: 431 KLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNP 490

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIP 589
           L+ +P  L  ++++K LDL    LD +P
Sbjct: 491 LQTLPGELWKVTNIKRLDLSSCWLDTLP 518



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 68/368 (18%)

Query: 285 LTSLEII---DCPNFERLPD---ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           LT+L+++   +C N ++LP    +L +LQ L+  I    AI      L +L  L  L+L+
Sbjct: 130 LTNLKVLCLENC-NLDKLPPVVLKLSHLQVLD--ISKNKAISLPKMILKKLKKLKVLKLR 186

Query: 339 NCSELEYISSSIFKLKS-VESIEISNC------SNLKGFPEIPFCNIDGSGIERIPSSVL 391
           +C +L  I   IF+ +S +E +++S          L+    I    ++ +G+  +P +VL
Sbjct: 187 DC-DLVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVL 245

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           +L++  KL+                 +   K  +L D+L  L  L+ LR+  T +  VP+
Sbjct: 246 ELSQLEKLD-----------------LSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPE 288

Query: 452 -----------------------SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
                                   + QL+ + +L L  C    +LP  +     L  L++
Sbjct: 289 VVWKLTHLEELHLLSNPLQTLSVKVGQLSRIKRLDLSNCH-LRTLPPEVGTLTQLERLKV 347

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
            + +    LP E+  +  +K L +    +  +P  +G L+ LEWL LS N LQ +P  L 
Sbjct: 348 ANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELG 407

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR 607
            ++++  L LS+  L  +P ++  L+ LK+L +  N L  +P  L         +  S++
Sbjct: 408 HVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLPGEL--------GQVASIK 459

Query: 608 LSVDLRNC 615
             +DL NC
Sbjct: 460 -HLDLSNC 466


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 157/294 (53%), Gaps = 17/294 (5%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L  L ++   +  LP+ +GQL  L  LEL N ++L  +   I +LK+++ 
Sbjct: 61  LPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNN-NQLATLPKEIGQLKNLQV 119

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
           +E++N + L   P+          I ++ +  VL+LN  ++L +LP  +   K+L  L +
Sbjct: 120 LELNN-NQLATLPK---------EIGQLKNLQVLELNN-NQLATLPKEIGQLKNLQWLNL 168

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
           +   +L  LP+E+G L+  + L +    +  +PK + QL  L +L L   + F + P  +
Sbjct: 169 V-TNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQFTAFPKEI 226

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              K+L  L +        LP+EIG L+ L+ L +    ++ +   +GQL +L+ L L+D
Sbjct: 227 GQLKNLQQLNLY-ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND 285

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           N L+ +P+ + QL +L  L L+NN  + +PE +  L +L+ LDL  N    + E
Sbjct: 286 NQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSE 339



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 35/353 (9%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAI 319
           SE KLK  P+      GQ     L +L++++  N     LP E+G L+ L  L ++   +
Sbjct: 54  SEQKLKTLPKE----IGQ-----LQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQL 104

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE------- 372
             LP+ +GQL  L  LEL N ++L  +   I +LK+++ +E++N + L   P+       
Sbjct: 105 ATLPKEIGQLKNLQVLELNN-NQLATLPKEIGQLKNLQVLELNN-NQLATLPKEIGQLKN 162

Query: 373 IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           + + N+  + +  +P  + +L          ++L +LP  +   K+L  L  ++  +   
Sbjct: 163 LQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLREL-YLNTNQFTA 221

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTS 484
            P E+G L+ L++L +    ++ +P  + QL  L +L L    S+  L +       L +
Sbjct: 222 FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHL----SYNQLKTLSAEIGQLQN 277

Query: 485 LEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII 542
           L+++D  +     LP EIG L+ L+VL +     + VPE +GQL +L+ L L  N  + +
Sbjct: 278 LQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTV 337

Query: 543 PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            E + QL +L  L L+NN L+ +   +  L +L+ L L  N L  +P  +R  
Sbjct: 338 SEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQL 390



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 25/211 (11%)

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
           L LS+ KLK      +LP  +   ++L  LE+ +      LP EIG L+ L+VL +    
Sbjct: 51  LDLSEQKLK------TLPKEIGQLQNLQVLEL-NNNQLATLPKEIGQLKNLQVLELNNNQ 103

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +  +P+ +GQL +L+ L L++N L  +P+ + QL +L  L+L+NN L  +P+ +  L +L
Sbjct: 104 LATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNL 163

Query: 576 KYLDLFENNLDRIPE---YLRSFP---------TSIPSEFTSLRLSVDLRNCLKLDPNEL 623
           ++L+L  N L  +PE    L++F          T++P E   L+   +LR  L L+ N+ 
Sbjct: 164 QWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLK---NLRE-LYLNTNQF 219

Query: 624 SEIIKD-GWMKQSVNGETYITKSMYFPGNEI 653
           +   K+ G +K       Y  +    P NEI
Sbjct: 220 TAFPKEIGQLKNLQQLNLYANQLKTLP-NEI 249



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/472 (22%), Positives = 207/472 (43%), Gaps = 77/472 (16%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKL 137
           T L   ++N + ++ +DL   KL T   ++   QNL++L+L   + L      I  L  L
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELN-NNQLATLPKEIGQLKNL 94

Query: 138 EVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPK-MTSCHLRSTLPLLGVGIE 194
           +VL+L+  + L +LP  I    LK L +   +N  L  LPK +        L L    + 
Sbjct: 95  QVLELNNNQ-LATLPKEIGQ--LKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 151

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP  I  L N+ + L     +L  +   I +LQ  +++ + +                 
Sbjct: 152 TLPKEIGQLKNL-QWLNLVTNQLTTLPEEIGQLQNFQTLVLSKN---------------- 194

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
                           R  +LP      K+L  L  ++   F   P E+G L+ L +L +
Sbjct: 195 ----------------RLTTLPKEIGQLKNLREL-YLNTNQFTAFPKEIGQLKNLQQLNL 237

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
               ++ LP  +GQL  L +L L + ++L+ +S+ I +L++++ +++++           
Sbjct: 238 YANQLKTLPNEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQVLDLND----------- 285

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
                                 ++L++LP  +   K+L  L+ ++  + + +P+E+G L+
Sbjct: 286 ----------------------NQLKTLPKEIGQLKNLQVLD-LNNNQFKTVPEEIGQLK 322

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            L+ L +     + V + + QL   ++     +  ++L + +   K+L  L  ++     
Sbjct: 323 NLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLS-LNANQLT 381

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
            LP+EI  L+ L+ L +    ++ +   +GQL +L+ L L DN L  +P+ +
Sbjct: 382 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 195/429 (45%), Gaps = 62/429 (14%)

Query: 45  ELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           ++R  +  +  LKTL   I   +NL  L++  +++  L  ++  L +L+ ++L  ++L T
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLAT 106

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
              ++   +NL++L+L   + L      I  L  L+VL+L+  + L +LP  I       
Sbjct: 107 LPKEIGQLKNLQVLELN-NNQLATLPKEIGQLKNLQVLELNNNQ-LATLPKEI------- 157

Query: 163 LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
                   LKNL           L L+   +  LP  I  L N  + L+ S  RL  +  
Sbjct: 158 ------GQLKNL---------QWLNLVTNQLTTLPEEIGQLQNF-QTLVLSKNRLTTLPK 201

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMP----------SCNIDGTRSKEQPSSELKLKKCPRP 272
            I +L+ L  + ++     QF   P            N+   + K  P+   +L+   R 
Sbjct: 202 EIGQLKNLRELYLNTN---QFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNL-RE 257

Query: 273 ESLPSGQ-----CMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEG 325
             L   Q          L +L+++D  +   + LP E+G L+ L  L ++    + +PE 
Sbjct: 258 LHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEE 317

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           +GQL  L  L+L   ++ + +S  I +LK+++ + ++N + LK            + I +
Sbjct: 318 IGQLKNLQVLDL-GYNQFKTVSEEIGQLKNLQMLFLNN-NQLKTL---------SAEIGQ 366

Query: 386 IPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           + +  +L LN  ++L +LP+ +   K+L  L  +   +L+ L  E+G L+ L++L +   
Sbjct: 367 LKNLQMLSLN-ANQLTTLPNEIRQLKNLRELH-LSYNQLKTLSAEIGQLKNLKKLSLRDN 424

Query: 445 GIREVPKSL 453
            +  +PK +
Sbjct: 425 QLTTLPKEI 433



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 54/85 (63%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++VL +    ++ +P+ +GQL +L+ L L++N L  +P+ + QL +L  L+L+NN L  +
Sbjct: 48  VRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATL 107

Query: 566 PERLDPLSSLKYLDLFENNLDRIPE 590
           P+ +  L +L+ L+L  N L  +P+
Sbjct: 108 PKEIGQLKNLQVLELNNNQLATLPK 132


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 113/212 (53%), Gaps = 7/212 (3%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           E+ ++   F+KM +LRLL+F    N  +    +  P   LR   WH +PLK+L +  H E
Sbjct: 543 ELNLSVDAFAKMNKLRLLRF---YNLHLSRDFK-FPSNNLRSLHWHGYPLKSLPSNFHPE 598

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QLW+  +    LK I L +S+ LTK PD S A  L  + L  C+SL 
Sbjct: 599 KLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLV 658

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP-KMTSCHLR 183
           + H SI  L +L  L+L+ C  L +LP SI     L+ L L GCS LK LP  +      
Sbjct: 659 KLHPSIGALKELIFLNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCL 718

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
             L + G GI+E+ SSI  L+N+  L +  CK
Sbjct: 719 VELNVDGTGIKEVTSSINLLTNLEALSLAGCK 750



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 64/120 (53%), Gaps = 23/120 (19%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L  CSKLE+LP S+C   SL +L +  C KL++LPD+LG L+ L EL V+GTGI+EV 
Sbjct: 673 LNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVT 732

Query: 451 KSLAQLA-LSKLKLKKCS----------SFESLP---------SRLYVSKSLTSLEIIDC 490
            S+  L  L  L L  C           SF S P         S LY   SL SL + DC
Sbjct: 733 SSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLY---SLKSLNLSDC 789



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 25/253 (9%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           + L  G+  F+ L  +++    +  + PD       L R+I++G T++ +L   +G L  
Sbjct: 611 KQLWEGKKAFEKLKFIKLSHSQHLTKTPD-FSAAPKLRRIILNGCTSLVKLHPSIGALKE 669

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIE 384
           L  L L+ CS+LE +  SI +L S++++ +S CS LK  P+       +   N+DG+GI+
Sbjct: 670 LIFLNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIK 729

Query: 385 RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR---- 440
            + SS+   N  + LE+L  + C      S  +I  +     P +L  L  L  L+    
Sbjct: 730 EVTSSI---NLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNL 786

Query: 441 -----VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
                +EG    ++    +   L   K    +SF +LP+ L     L SL +  CK+   
Sbjct: 787 SDCNLLEGALPSDLSSLSSLENLYLDK----NSFITLPASLSRLSRLRSLTLEHCKSLRS 842

Query: 496 LPDEIGNLEYLKV 508
           LP+   ++EYL  
Sbjct: 843 LPELPSSIEYLNA 855



 Score = 42.4 bits (98), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 41/257 (15%)

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A+  ++ D +A +EL   +   A ++KL L     L       F   ++ S+      +
Sbjct: 529 EAVEGMVFDLSASKELNLSVDAFAKMNKLRLLRFYNLHLSRDFKFPSNNLRSL------H 582

Query: 367 LKGFP--EIPFCNIDGSGIERIPSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKL 423
             G+P   +P  N         P  +++LN C S L+ L      F+ L  +++   + L
Sbjct: 583 WHGYPLKSLP-SNFH-------PEKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHL 634

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            + PD                     PK      L ++ L  C+S   L   +   K L 
Sbjct: 635 TKTPD-----------------FSAAPK------LRRIILNGCTSLVKLHPSIGALKELI 671

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQII 542
            L +  C     LP  I  L  L+ LT+ G + ++++P+ LG+L  L  L +    ++ +
Sbjct: 672 FLNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEV 731

Query: 543 PESLNQLSSLVSLKLSN 559
             S+N L++L +L L+ 
Sbjct: 732 TSSINLLTNLEALSLAG 748


>gi|168057243|ref|XP_001780625.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667893|gb|EDQ54511.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 277

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 140/273 (51%), Gaps = 13/273 (4%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSEL 343
           L SL + +C   E LP+ +GNL +L  L ++   +++ LP+ +G    L KL L  C  L
Sbjct: 9   LVSLNVAECVYLEALPESMGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNLYGCGSL 68

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
           + +   +  L S+  + +  C  L+  P+    N++ S +E      L LN C  LE+LP
Sbjct: 69  KALPEGMGNLNSLVELNLYGCVYLEALPK-SMGNLN-SLVE------LNLNGCVYLEALP 120

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKL 461
            S+    SL  L++  C  L+ LP  +GNL +L EL + G   +  +PKS+  L +L +L
Sbjct: 121 KSMGNLNSLVELDLSSCGSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVEL 180

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE-VP 520
            L  C S ++LP  +    SL  L +  C     LP  +GNL  L  L + G    E +P
Sbjct: 181 DLSSCGSLKALPKSMDNLNSLVELNLNGCVYLEALPKSMGNLNSLVELNLNGCVYLEALP 240

Query: 521 ESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSL 552
           +S+G L+ L  L L    +L+ +P+S+  L +L
Sbjct: 241 KSMGNLNCLVQLDLRGCKSLEALPKSIGNLKNL 273



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 145/327 (44%), Gaps = 63/327 (19%)

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNL 174
           L++  C  L     S+  LN L VL ++ C SL +LP SI +S  L +L L GC +LK  
Sbjct: 12  LNVAECVYLEALPESMGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNLYGCGSLK-- 69

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
                                LP  +  L+++ EL +Y C  LE +  S+  L  L    
Sbjct: 70  --------------------ALPEGMGNLNSLVELNLYGCVYLEALPKSMGNLNSL---- 105

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
                                       EL L  C   E+LP       SL  L++  C 
Sbjct: 106 ---------------------------VELNLNGCVYLEALPKSMGNLNSLVELDLSSCG 138

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRE-LPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           + + LP  +GNL +L  L ++G    E LP+ +G L  L +L+L +C  L+ +  S+  L
Sbjct: 139 SLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPKSMDNL 198

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            S+  + ++ C  L+  P+    N++ S +E      L LN C  LE+LP S+     L 
Sbjct: 199 NSLVELNLNGCVYLEALPK-SMGNLN-SLVE------LNLNGCVYLEALPKSMGNLNCLV 250

Query: 414 SLEIIDCKKLERLPDELGNLEALEELR 440
            L++  CK LE LP  +GNL+ L+  +
Sbjct: 251 QLDLRGCKSLEALPKSIGNLKNLKVFK 277



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 134/279 (48%), Gaps = 15/279 (5%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
           +  LVSL   +  Y   L  LP+ +    +L +L +  C SL     SI   N L  L+L
Sbjct: 6   LHKLVSLNVAECVY---LEALPESMGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNL 62

Query: 143 DRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLG-VGIEELPSS 199
             C SL +LP  + +   L  L L GC  L+ LPK M + +    L L G V +E LP S
Sbjct: 63  YGCGSLKALPEGMGNLNSLVELNLYGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKS 122

Query: 200 IKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ 259
           +  L+++ EL + SC  L+ +  S+  L  L  + ++ C  L+ L     N++       
Sbjct: 123 MGNLNSLVELDLSSCGSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLV---- 178

Query: 260 PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
              EL L  C   ++LP       SL  L +  C   E LP  +GNL +L  L ++G   
Sbjct: 179 ---ELDLSSCGSLKALPKSMDNLNSLVELNLNGCVYLEALPKSMGNLNSLVELNLNGCVY 235

Query: 320 RE-LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            E LP+ +G L  L +L+L+ C  LE +  SI  LK+++
Sbjct: 236 LEALPKSMGNLNCLVQLDLRGCKSLEALPKSIGNLKNLK 274



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 25/231 (10%)

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQL-ALSKLKLKKCSSF 469
           L SL + +C  LE LP+ +GNL +L  L V   G ++ +P+S+    +L KL L  C S 
Sbjct: 9   LVSLNVAECVYLEALPESMGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNLYGCGSL 68

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE-VPESLGQLSS 528
           ++LP  +    SL  L +  C     LP  +GNL  L  L + G    E +P+S+G L+S
Sbjct: 69  KALPEGMGNLNSLVELNLYGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNS 128

Query: 529 LEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE---- 582
           L  L LS   +L+ +P+S+  L+SLV L L+    LE +P+ +  L+SL  LDL      
Sbjct: 129 LVELDLSSCGSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSL 188

Query: 583 -------NNLDRIPE-------YLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
                  +NL+ + E       YL + P S+     SL + ++L  C+ L+
Sbjct: 189 KALPKSMDNLNSLVELNLNGCVYLEALPKSM-GNLNSL-VELNLNGCVYLE 237



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 15/210 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           M  +NS +++N Y    +  L   K  G+ N  +  +L G       Y E     +  LN
Sbjct: 75  MGNLNSLVELNLYGCVYLEALP--KSMGNLNSLVELNLNGC-----VYLEALPKSMGNLN 127

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLG 119
            L   +L S       +  L   + NL SL  ++L     L  LP  +    +L  LDL 
Sbjct: 128 SLVELDLSSC----GSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLS 183

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-M 177
            C SL     S+  LN L  L+L+ C  L +LP S+ +   L  L L GC  L+ LPK M
Sbjct: 184 SCGSLKALPKSMDNLNSLVELNLNGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSM 243

Query: 178 TSCHLRSTLPLLGV-GIEELPSSIKCLSNI 206
            + +    L L G   +E LP SI  L N+
Sbjct: 244 GNLNCLVQLDLRGCKSLEALPKSIGNLKNL 273


>gi|42562922|ref|NP_176590.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196067|gb|AEE34188.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 997

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 32/308 (10%)

Query: 2   SKINSEIQINPYTFSKMTELRLL-----KFCGSKNKCMVHSLEGVPFTELRYFEWHQFPL 56
           S IN E+ I+     +M  LR L     K  G     +   +E  P   LR   W  +P 
Sbjct: 535 SGIN-EVSISNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEFPP--RLRLLHWDAYPS 591

Query: 57  KTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           K L +    ENLV L M  S++  LW   Q L  LK+++L+ S  L +LPDLS A NLE+
Sbjct: 592 KCLPLKFRAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEM 651

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           LDL  C +L E  SSI+ L+KL+V+ +D C+SL  +PT+I+   L+ + + GC  LK  P
Sbjct: 652 LDLSVCLALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFP 711

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
             ++   R  L L+  G+EE+P+SI   S + ++ +   + L++I+              
Sbjct: 712 AFSTKIKR--LYLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSIT-------------- 755

Query: 236 HRCPNLQFLEMPSCNI----DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           H   +LQ L++ S +I    D      Q    L+L +C + +SLP    +  SL  L   
Sbjct: 756 HLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPE---LPASLRLLTAE 812

Query: 292 DCPNFERL 299
           DC + ER+
Sbjct: 813 DCESLERV 820



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 52/299 (17%)

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
           L+ LPD L N   LE L +     + E+P S+  L  L  + +  C S   +P+ + ++ 
Sbjct: 637 LKELPD-LSNATNLEMLDLSVCLALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLA- 694

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NL 539
           SL ++ +  C      P        +K L +  T + EVP S+   S L  + LS + NL
Sbjct: 695 SLETMYMTGCPQLKTFP---AFSTKIKRLYLVRTGVEEVPASITHCSRLLKIDLSGSRNL 751

Query: 540 QIIPESLNQL-SSLVSLKLSNNNLERIPER-LDPLSSLKYLDLFE----NNLDRIPEYLR 593
           +    S+  L SSL +L LS+ ++E I +  +  L  L +L L       +L  +P  LR
Sbjct: 752 K----SITHLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLR 807

Query: 594 -------------SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
                        ++P + P+        ++  NCLKL       II+   +K +     
Sbjct: 808 LLTAEDCESLERVTYPLNTPTG------QLNFTNCLKLGEEAQRVIIQQSLVKHAC---- 857

Query: 641 YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHE 699
                  FPG+ +P  F H++ G+++ +       +     F  CV+++    +C R++
Sbjct: 858 -------FPGSVMPSEFNHRARGNSLKILVKSSASF----AFKACVLISPRQLQCERNQ 905


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 155/300 (51%), Gaps = 29/300 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+GNLQ L  L ++      LPE +G L  L  L+L + + L  +   I  L+ +++
Sbjct: 120 LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSH-NRLTTLPKEIGNLQKLQT 178

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKS 411
           ++++                  + ++ +P  + KL K        ++L +LP  +   + 
Sbjct: 179 LDLAQ-----------------NQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQK 221

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
           L +L + +  +L  LP E+GNL+ L+EL +       +P+ +  L  L KL L   S   
Sbjct: 222 LEALHLGN-NELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAH-SRLT 279

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +LP  +   ++L  L + +   F  LP+EIGNL+ L+ L +  + +  +P+ +G+L  L+
Sbjct: 280 TLPKEIGNLQNLQELNL-NSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQ 338

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L L+ N L+ +P+ + +L +L +L LS+N L  +P+ +  L +LK LDL  N L  +PE
Sbjct: 339 KLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPE 398



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 163/342 (47%), Gaps = 49/342 (14%)

Query: 284 SLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
           +L  L+ +D  +     LP E+GNLQ L  L +    ++ LP+ + +L  L  L L N +
Sbjct: 149 NLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGN-N 207

Query: 342 ELEYISSSIFKLKSVESIEISN---------CSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           EL  +   I KL+ +E++ + N           NL+   E+   N++ +    +P  +  
Sbjct: 208 ELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQEL---NLNSNQFTTLPEEIGN 264

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        S+L +LP  +   ++L  L + +  +   LP+E+GNL+ L++L +  + 
Sbjct: 265 LQKLQKLSLAHSRLTTLPKEIGNLQNLQELNL-NSNQFTTLPEEIGNLQKLQKLDLNYSQ 323

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +  +PK + +L  L KL L + +  ++LP  +   ++L +L +        LP EIGNL+
Sbjct: 324 LTTLPKEIGKLQKLQKLSLAQ-NQLKTLPKEIGKLQNLKNLSL-SHNELTTLPKEIGNLQ 381

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII---------------------- 542
            LK L + G  +  +PE +G L  L+ L L+ N L+ +                      
Sbjct: 382 NLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTT 441

Query: 543 -PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            P+ +  L SL SL LS N+L   PE +  L  LK+L L  N
Sbjct: 442 LPKEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGN 483



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 198/477 (41%), Gaps = 117/477 (24%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I + +NL  L +  ++ T L +++ NL  L+ +DL +++L T   ++   Q L+ LDL  
Sbjct: 124 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQ 183

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            + L      I+ L KLE L L     LT+LP  I                  L K+ + 
Sbjct: 184 -NQLKTLPKEIEKLQKLEALHLGN-NELTTLPKEIEK----------------LQKLEAL 225

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           HL +        +  LP  I  L N+ EL + S  +   +   I  LQ L+ + +     
Sbjct: 226 HLGNN------ELTTLPKEIGNLQNLQELNLNS-NQFTTLPEEIGNLQKLQKLSLAHS-- 276

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
                                         R  +LP      ++L  L  ++   F  LP
Sbjct: 277 ------------------------------RLTTLPKEIGNLQNLQELN-LNSNQFTTLP 305

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           +E+GNLQ L +L ++ + +  LP+ +G+L  L KL L   ++L+ +   I KL++++++ 
Sbjct: 306 EEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQ-NQLKTLPKEIGKLQNLKNLS 364

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
           +S+                                 ++L +LP  +   ++L  L+ +  
Sbjct: 365 LSH---------------------------------NELTTLPKEIGNLQNLKELD-LGG 390

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            +L  LP+++GNL+ L+EL + G  ++ +PK +  L   +      +             
Sbjct: 391 NQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQ------------ 438

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
                          LP EIGNL+ L+ L + G ++   PE +G+L  L+WL L  N
Sbjct: 439 ------------LTTLPKEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGN 483



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 24/169 (14%)

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
           KL  LP E+GNL+ L+EL +                         + F +LP  +   + 
Sbjct: 116 KLTTLPKEIGNLQNLQELNL-----------------------NSNQFTTLPEEIGNLQK 152

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           L +L++   +    LP EIGNL+ L+ L +    ++ +P+ + +L  LE L L +N L  
Sbjct: 153 LQTLDLSHNR-LTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTT 211

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           +P+ + +L  L +L L NN L  +P+ +  L +L+ L+L  N    +PE
Sbjct: 212 LPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPE 260



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
           G  +  +P+ +G L +L+ L L+ N    +PE +  L  L +L LS+N L  +P+ +  L
Sbjct: 114 GNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNL 173

Query: 573 SSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDP 620
             L+ LDL +N L  +P+ +                T++P E   L+        L L  
Sbjct: 174 QKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQ----KLEALHLGN 229

Query: 621 NELSEIIKD 629
           NEL+ + K+
Sbjct: 230 NELTTLPKE 238


>gi|15241609|ref|NP_199300.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2660663|gb|AAC79134.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|10177477|dbj|BAB10868.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007787|gb|AED95170.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1170

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 238/529 (44%), Gaps = 87/529 (16%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +E+LP +  N + L  L +  ++I+++ EG+    +L    L   S+L  +   +   K+
Sbjct: 668  WEKLPSDF-NPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLG-LSNAKN 725

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTS 414
            +E + +  C++L   P+          +E + S V L + +C+ L  L S      SL  
Sbjct: 726  LERLNLEGCTSLLKLPQ---------EMENMKSLVFLNMRRCTSLTCLQS--IKVSSLKI 774

Query: 415  LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
            L + DC KLE    E+ + E LEEL ++GT I+ +P +   L  L  L ++ C+  ESLP
Sbjct: 775  LILSDCSKLEEF--EVIS-ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLP 831

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             RL   K+L  L +  C     +P ++ ++++L++L + GT IR++P    ++ SL+ L 
Sbjct: 832  KRLGKQKALQELVLSGCSKLESVPTDVKDMKHLRLLLLDGTRIRKIP----KIKSLKCLC 887

Query: 534  LSDNNLQI-IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLF--------EN 583
            LS N   + + ++L   S+L  L + N  NL  +P    P   L+YL+++        EN
Sbjct: 888  LSRNIAMVNLQDNLKDFSNLKCLVMKNCENLRYLPSL--P-KCLEYLNVYGCERLESVEN 944

Query: 584  NL--DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETY 641
             L  DR+  +L         E  S  L  +  N  +   + +S   K  W    +  E Y
Sbjct: 945  PLVADRLTLFLDR-----SEELRSTFLFTNCHNLFQDAKDSISTYAK--WKCHRLAVECY 997

Query: 642  ---ITKSMYF----PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM-GFAFCVVVACSVS 693
               I    +F    PG  +P WF HQ+ GS +  +  +P  YN ++ G A C VV+    
Sbjct: 998  EQDIVSGAFFNTCYPGYIVPSWFDHQAVGSVLEPRL-EPHWYNTMLSGIALCAVVSF--- 1053

Query: 694  ECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTS-----SYLGKISHVESDHVFLGSSIFA 748
                HE+   D     F V C  + E  D           L +   +E+DHVF+G     
Sbjct: 1054 ----HEN--QDPIIGSFSVKCTLQFENEDGSLRFDCDIGCLNEPGMIEADHVFIGYV--- 1104

Query: 749  GENSCKRSDEFF-------------FHIDRSC-CEVKKCGIHFVHAQRQ 783
               +C R  +               FH+  +C  +V  CG   ++ Q +
Sbjct: 1105 ---TCSRLKDHHSIPIHHPTTVKMQFHLTDACKSKVVDCGFRLMYTQSR 1150



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 183/401 (45%), Gaps = 77/401 (19%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS---KNKCMVHSLEGV-----PFTELRYFEWH 52
           MSK+  E+  +   FS M  LR LK   S   K    +   + V     P  ++RY  W 
Sbjct: 605 MSKVPEEMTFDGNIFSNMCNLRYLKIYSSVCHKEGEGIFKFDTVREIQLPLDKVRYLHWM 664

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           ++P + L +  + ENLV L++P S + ++W+ V++   LK  +L YS  LT L  LS A+
Sbjct: 665 KYPWEKLPSDFNPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGLSNAK 724

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE L+L  C+SL +    ++ +  L  L++ RC SLT L  SI    LK L+L  CS L
Sbjct: 725 NLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCL-QSIKVSSLKILILSDCSKL 783

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +   ++ S +L   L L G  I+ LP +   L+ +  L +  C  LE++   + K + L+
Sbjct: 784 EEF-EVISENLEE-LYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQ 841

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                                          EL L  C + ES+P+              
Sbjct: 842 -------------------------------ELVLSGCSKLESVPT-------------- 856

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELP--EGLGQLALLSKLELKNCSELEYISSS 349
                     ++ +++ L  L++DGT IR++P  + L  L L   + + N      +  +
Sbjct: 857 ----------DVKDMKHLRLLLLDGTRIRKIPKIKSLKCLCLSRNIAMVN------LQDN 900

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFC--NIDGSGIERIPS 388
           +    +++ + + NC NL+  P +P C   ++  G ER+ S
Sbjct: 901 LKDFSNLKCLVMKNCENLRYLPSLPKCLEYLNVYGCERLES 941



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 16/175 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L +++C     L S +    SL  L + DC   E       NL+    L +DGTAI+ LP
Sbjct: 753 LNMRRCTSLTCLQSIKV--SSLKILILSDCSKLEEFEVISENLE---ELYLDGTAIKGLP 807

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFC 376
              G L  L  L ++ C+ELE +   + K K+++ + +S CS L+  P        +   
Sbjct: 808 PAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQELVLSGCSKLESVPTDVKDMKHLRLL 867

Query: 377 NIDGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
            +DG+ I +IP       L L++   + +L  +L  F +L  L + +C+ L  LP
Sbjct: 868 LLDGTRIRKIPKIKSLKCLCLSRNIAMVNLQDNLKDFSNLKCLVMKNCENLRYLP 922


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 161/302 (53%), Gaps = 18/302 (5%)

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           ++G L  L +L + G  ++ LP  +G+L  L  L+L+N ++LE +   I +LK+++ +++
Sbjct: 62  DIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRN-NKLESLPPEIEELKNLQHLDL 120

Query: 362 SNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF----K 410
            + + LK  P        +   ++  +  E  P+ + KL    +L    +   +F     
Sbjct: 121 GD-NKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIA 179

Query: 411 SLTSLEIIDCK--KLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS 467
            L  L+I+  +  KL+ LPDE+G ++ L EL ++   +   P  +A+L  L  L L   +
Sbjct: 180 ELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLG-YN 238

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
            FES P+ +   K+L  L + D K    LPDEIG LE L+ L ++G  +  +P  +G+L 
Sbjct: 239 EFESFPTVIVKLKNLQYLFLNDNK-LKLLPDEIGELENLRELNLRGNKLETLPPVIGELE 297

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
           +L  L L  NNL+ +P+ + +L +L  L L NN +E +P  +  L +L+ L L +N L+ 
Sbjct: 298 NLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKLET 357

Query: 588 IP 589
           +P
Sbjct: 358 LP 359



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 61/296 (20%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ES P+     K+L  L I++   F   P E+  L+ L  L + G  ++ LP+ +G++  L
Sbjct: 149 ESFPTVIRKLKNLERL-ILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKEL 207

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
            +L L + +ELE   + I +L+ ++++++       G+ E                    
Sbjct: 208 RELGLDD-NELESFPTVIAELRKLQTLDL-------GYNE-------------------- 239

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
                  ES P+ +   K+L  L  ++  KL+ LPDE+G LE L EL + G  +  +P  
Sbjct: 240 ------FESFPTVIVKLKNLQYL-FLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPV 292

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           + +L                   LYV      LE+    N   LPD IG L+ L +L + 
Sbjct: 293 IGEL-----------------ENLYV------LELYK-NNLESLPDVIGKLKNLGMLNLG 328

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS-SLVSLKLSNNNLERIPE 567
              I  +P ++G+L +L  L LSDN L+ +P  + +LS SL  L L  NN+  + +
Sbjct: 329 NNKIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSEVGD 384



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 169/392 (43%), Gaps = 85/392 (21%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           NL  L + G+ +  L  ++  L +L+ +DL+ +KL +  P++   +NL+ LDLG  + L 
Sbjct: 68  NLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLG-DNKLK 126

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCS------NLKNLPKMT 178
                ++ L  L+ LDL       S PT I   K L+RL+L           +  L K+ 
Sbjct: 127 ALPYEVEELKNLQHLDLG-YNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQ 185

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
             +LR      G  ++ LP  I  +  + EL +     LE+  + I +L+ L+++     
Sbjct: 186 ILYLR------GNKLKLLPDEIGEMKELRELGL-DDNELESFPTVIAELRKLQTL----- 233

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            +L + E  S           P+  +KLK           Q +F +   L++        
Sbjct: 234 -DLGYNEFESF----------PTVIVKLKNL---------QYLFLNDNKLKL-------- 265

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LPDE+G L+ L  L + G  +  LP  +G+L  L  LEL   + LE +   I KLK++  
Sbjct: 266 LPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLELYK-NNLESLPDVIGKLKNLGM 324

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + + N                                 +K+E+LP+++   ++L  L + 
Sbjct: 325 LNLGN---------------------------------NKIETLPAAIGELQNLRELYLS 351

Query: 419 DCKKLERLPDELGNLEA-LEELRVEGTGIREV 449
           D  KLE LP E+  L   L  L + G  + EV
Sbjct: 352 D-NKLETLPVEIEKLSGSLRLLNLMGNNMSEV 382



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 17/137 (12%)

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
           V++I    IR +   +G+L +LE L L  NNL+ +P  + +L +L  L L NN LE +P 
Sbjct: 48  VISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPP 107

Query: 568 RLDPLSSLKYLDLFENNLDRIP----------------EYLRSFPTSIPSEFTSLRLSVD 611
            ++ L +L++LDL +N L  +P                    SFPT I       RL ++
Sbjct: 108 EIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILN 167

Query: 612 LRNCLKLDPNELSEIIK 628
             N   L P E++E+ K
Sbjct: 168 -NNKFGLFPIEIAELKK 183



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 17/291 (5%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +K+  L  +++ L +L+ +DL  +KL     ++   +NL+ LDLGY +  
Sbjct: 90  KNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGY-NQF 148

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHL 182
               + I+ L  LE L L+  K     P  I   K L+ L LRG + LK LP ++     
Sbjct: 149 ESFPTVIRKLKNLERLILNNNK-FGLFPIEIAELKKLQILYLRG-NKLKLLPDEIGEMKE 206

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L    +E  P+ I  L  + + L       E+  + I KL+ L+ + ++    L+
Sbjct: 207 LRELGLDDNELESFPTVIAELRKL-QTLDLGYNEFESFPTVIVKLKNLQYLFLNDNK-LK 264

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            L      ++  R       EL L +  + E+LP      ++L  LE+    N E LPD 
Sbjct: 265 LLPDEIGELENLR-------ELNL-RGNKLETLPPVIGELENLYVLELYKN-NLESLPDV 315

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           +G L+ L  L +    I  LP  +G+L  L +L L + ++LE +   I KL
Sbjct: 316 IGKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSD-NKLETLPVEIEKL 365



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 25/206 (12%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNK---CMVHSLEGVPFTELRYFEWHQFPLKTLNIL 62
           +++++ P    +M ELR L    ++ +    ++  L  +   +L Y E+  FP     I+
Sbjct: 192 NKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTV---IV 248

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +NL  L +  +K+  L D++  L +L+ ++L+ +KL T  P +   +NL +L+L Y +
Sbjct: 249 KLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLEL-YKN 307

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCH 181
           +L      I  L  L +L+L   K + +LP +I               L+NL ++  S +
Sbjct: 308 NLESLPDVIGKLKNLGMLNLGNNK-IETLPAAI-------------GELQNLRELYLSDN 353

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIG 207
              TLP   V IE+L  S++ L+ +G
Sbjct: 354 KLETLP---VEIEKLSGSLRLLNLMG 376


>gi|6692110|gb|AAF24575.1|AC007764_17 F22C12.17 [Arabidopsis thaliana]
          Length = 1195

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 32/308 (10%)

Query: 2    SKINSEIQINPYTFSKMTELRLL-----KFCGSKNKCMVHSLEGVPFTELRYFEWHQFPL 56
            S IN E+ I+     +M  LR L     K  G     +   +E  P   LR   W  +P 
Sbjct: 733  SGIN-EVSISNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEFPP--RLRLLHWDAYPS 789

Query: 57   KTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
            K L +    ENLV L M  S++  LW   Q L  LK+++L+ S  L +LPDLS A NLE+
Sbjct: 790  KCLPLKFRAENLVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPDLSNATNLEM 849

Query: 116  LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
            LDL  C +L E  SSI+ L+KL+V+ +D C+SL  +PT+I+   L+ + + GC  LK  P
Sbjct: 850  LDLSVCLALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFP 909

Query: 176  KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
              ++   R  L L+  G+EE+P+SI   S + ++ +   + L++I+              
Sbjct: 910  AFSTKIKR--LYLVRTGVEEVPASITHCSRLLKIDLSGSRNLKSIT-------------- 953

Query: 236  HRCPNLQFLEMPSCNI----DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
            H   +LQ L++ S +I    D      Q    L+L +C + +SLP      + LT+    
Sbjct: 954  HLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTAE--- 1010

Query: 292  DCPNFERL 299
            DC + ER+
Sbjct: 1011 DCESLERV 1018



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 52/299 (17%)

Query: 423  LERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
            L+ LPD L N   LE L +     + E+P S+  L  L  + +  C S   +P+ + ++ 
Sbjct: 835  LKELPD-LSNATNLEMLDLSVCLALAELPSSIKNLHKLDVIYMDLCESLHMIPTNINLA- 892

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NL 539
            SL ++ +  C      P        +K L +  T + EVP S+   S L  + LS + NL
Sbjct: 893  SLETMYMTGCPQLKTFP---AFSTKIKRLYLVRTGVEEVPASITHCSRLLKIDLSGSRNL 949

Query: 540  QIIPESLNQL-SSLVSLKLSNNNLERIPER-LDPLSSLKYLDLFE----NNLDRIPEYLR 593
            +    S+  L SSL +L LS+ ++E I +  +  L  L +L L       +L  +P  LR
Sbjct: 950  K----SITHLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLR 1005

Query: 594  -------------SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
                         ++P + P+        ++  NCLKL       II+   +K +     
Sbjct: 1006 LLTAEDCESLERVTYPLNTPTG------QLNFTNCLKLGEEAQRVIIQQSLVKHAC---- 1055

Query: 641  YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHE 699
                   FPG+ +P  F H++ G+++ +       +     F  CV+++    +C R++
Sbjct: 1056 -------FPGSVMPSEFNHRARGNSLKILVKSSASF----AFKACVLISPRQLQCERNQ 1103


>gi|186511937|ref|NP_193424.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658421|gb|AEE83821.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1040

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 175/386 (45%), Gaps = 57/386 (14%)

Query: 10  INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLV 68
           I+  +F  M  L+ L   G     +  SL  +P  +LR  +W + PLK L      + L+
Sbjct: 504 IDEKSFQGMRNLQCLSVTGDYMD-LPQSLVYLP-PKLRLLDWDRCPLKCLPYSFKADYLI 561

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            L M GSK+ +LW+    L SLKR+++  S+ L ++ DLS A+NLE L+L  C SL    
Sbjct: 562 QLTMMGSKLEKLWEGTVPLGSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLS 621

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           SSIQ   KL  LD+  C  L S PT +              NL++L  + +C     LP 
Sbjct: 622 SSIQNAIKLIYLDMRGCTKLESFPTHL--------------NLESLEYLENCIWNKNLP- 666

Query: 189 LGVGIEELPSSIKCL------SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              G++ L   ++C+      +++  L++   + LE +   +  L  L  + +  C NL 
Sbjct: 667 ---GLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLT 723

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
             E+P        SK      L L  C    ++PS     + L  LE+ +C   E LP +
Sbjct: 724 --EIPDL------SKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTD 775

Query: 303 LGNLQALNRLIIDG---------------------TAIRELPEGLGQLALLSKLELKNCS 341
           + NL +L  L + G                     TAI E+P  +   + L+ L +  C 
Sbjct: 776 V-NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCCIENFSWLTVLMMYCCK 834

Query: 342 ELEYISSSIFKLKSVESIEISNCSNL 367
            L+ IS +IF+L  ++ ++ + C  +
Sbjct: 835 RLKNISPNIFRLTILKLVDFTECRGV 860



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 26/300 (8%)

Query: 296 FERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            E+L +    L +L R+ + G+  +RE+ + L     L +L L  C  L  +SSSI    
Sbjct: 570 LEKLWEGTVPLGSLKRMNMHGSRYLREISD-LSNARNLEELNLSECRSLVTLSSSIQNAI 628

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK---- 410
            +  +++  C+ L+ FP     +++   +E + + +   N    L  L    C+ +    
Sbjct: 629 KLIYLDMRGCTKLESFP----THLNLESLEYLENCIWNKN----LPGLDYLACLVRCMPC 680

Query: 411 -----SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLK 464
                 L  L +   + LE+L + + +L +L E+ +   G + E+P       L  L L 
Sbjct: 681 EFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLS 740

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESL 523
            C S  ++PS +   + L  LE+ +C     LP ++ NL  LK+L + G +++R  P   
Sbjct: 741 NCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLI- 798

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFE 582
               S++WL L +  ++ +P  +   S L  L +     L+ I   +  L+ LK +D  E
Sbjct: 799 --SKSIKWLYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKNISPNIFRLTILKLVDFTE 856



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 33/289 (11%)

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L +L + G+ + +L EG   L  L ++ +     L  IS  +   +++E + +S C +L 
Sbjct: 560 LIQLTMMGSKLEKLWEGTVPLGSLKRMNMHGSRYLREISD-LSNARNLEELNLSECRSL- 617

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL----------CMF-KSLTSLE- 416
                    +  S    I    L +  C+KLES P+ L          C++ K+L  L+ 
Sbjct: 618 -------VTLSSSIQNAIKLIYLDMRGCTKLESFPTHLNLESLEYLENCIWNKNLPGLDY 670

Query: 417 ---IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
              ++ C   E  P++L  L       +E   + E  +SLA L   ++ + +C +   +P
Sbjct: 671 LACLVRCMPCEFRPNDLVRLIVRGNQMLEK--LWEGVQSLASLV--EMDMSECGNLTEIP 726

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             L  + +L +L + +CK+ + +P  IGNL+ L  L +K     EV  +   LSSL+ L 
Sbjct: 727 D-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSSLKMLD 785

Query: 534 LSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
           LS  ++L+  P       S+  L L N  +E +P  ++  S L  L ++
Sbjct: 786 LSGCSSLRTFPLISK---SIKWLYLENTAIEEVPCCIENFSWLTVLMMY 831


>gi|297848176|ref|XP_002891969.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337811|gb|EFH68228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 160/343 (46%), Gaps = 44/343 (12%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPF-TELRYFEWHQFPLK 57
           +++IN E++I+   F+KM  L  LK    K+  K  +H    + F   L+   W  +P K
Sbjct: 529 VAEIN-ELRISATAFAKMCNLAFLKVYNGKHTEKTQLHIPNEMEFPRRLKLLHWEAYPKK 587

Query: 58  TLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L I    ENLV   M  SK+ +LW+  Q L +LK ++L  S  L +LPDLS A NLE L
Sbjct: 588 SLPIGFCLENLVKFNMAFSKLEKLWEGTQPLANLKEMNLAVSTHLKELPDLSKATNLESL 647

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C++L E  SSI  L+KL  L +  C+SL  +PT I+   L+R+ +     LK  P 
Sbjct: 648 NLNGCTALVEIPSSIVNLHKLSELGMSTCESLEVIPTLINLASLERIWMFQSLQLKRFPD 707

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS------SIFKLQFL 230
             +      + +   G+EELP+S++  + +  L I S +  +  S+      S   L   
Sbjct: 708 SPTN--VKEIEIYDTGVEELPASLRHCTRLTTLDICSNRNFKTFSTHLPTCISWISLSNS 765

Query: 231 ESIRIHRC----PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
              RI  C     NLQFL +  C               KLK  P    LP       SL 
Sbjct: 766 GIERITACIKGLHNLQFLILTGCK--------------KLKSLPE---LPD------SLE 802

Query: 287 SLEIIDCPNFERLPDEL----GNLQALNRLIIDGTAIRELPEG 325
            L   DC + ER+   L      L+  N + + G A R + +G
Sbjct: 803 LLRAEDCESLERVSGPLKTPTATLRFTNCIKLGGQARRAIIKG 845



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 133/332 (40%), Gaps = 71/332 (21%)

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPKSLAQLAL 458
           +SLP   C+ ++L    +    KLE+L +    L  L+E+ +   T ++E+P       L
Sbjct: 587 KSLPIGFCL-ENLVKFNMA-FSKLEKLWEGTQPLANLKEMNLAVSTHLKELPDLSKATNL 644

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN-----------------------FMR 495
             L L  C++   +PS +     L+ L +  C++                         R
Sbjct: 645 ESLNLNGCTALVEIPSSIVNLHKLSELGMSTCESLEVIPTLINLASLERIWMFQSLQLKR 704

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL-VLSDNNLQIIPESLNQLSSLVS 554
            PD   N   +K + I  T + E+P SL   + L  L + S+ N +     L    S +S
Sbjct: 705 FPDSPTN---VKEIEIYDTGVEELPASLRHCTRLTTLDICSNRNFKTFSTHLPTCISWIS 761

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFE----NNLDRIPEYLR-------------SFPT 597
             LSN+ +ERI   +  L +L++L L       +L  +P+ L              S P 
Sbjct: 762 --LSNSGIERITACIKGLHNLQFLILTGCKKLKSLPELPDSLELLRAEDCESLERVSGPL 819

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWF 657
             P+   +LR +    NC+KL       IIK           +++      PG EIP  F
Sbjct: 820 KTPT--ATLRFT----NCIKLGGQARRAIIKG----------SFVRGWALLPGGEIPAKF 863

Query: 658 RHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
            H+  G+  SL  P  T       F  CVV++
Sbjct: 864 DHRVRGN--SLTIPHSTSNR----FKVCVVIS 889


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 183/706 (25%), Positives = 289/706 (40%), Gaps = 174/706 (24%)

Query: 7    EIQINPYTFSKMTELRLLKF------CGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL- 59
            ++Q++  TF KM  LR++ F          N  +   LE +P  +L++  W  FP K+L 
Sbjct: 468  KVQLHAETFKKMDNLRMMLFYKPYGVSKESNVILPAFLESLP-DDLKFLRWDGFPQKSLP 526

Query: 60   NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
                 +NLV L MP S + QLW   +NL+              ++PDL  AQ L+     
Sbjct: 527  EDFFPDNLVKLYMPHSHLKQLWQRDKNLI--------------QIPDLVNAQILK----- 567

Query: 120  YCSSLTETHSSIQYLNKLEVLDLDRCKSLTS--LPTSIHSKYLKRLVLRGCSNLKNLPKM 177
                         +L+KL+ L L+ C SL S  +P++I        VL GC         
Sbjct: 568  ------------NFLSKLKCLWLNWCISLKSVHIPSNILQTTSGLTVLHGC--------- 606

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
                  S+L +  VG E++        +I    +   KRL  ++++  + Q +  +  + 
Sbjct: 607  ------SSLDMFVVGNEKMRVQRATPYDIN---MSRNKRLRIVATA--QNQSIPPLESNT 655

Query: 238  CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ-CMFKSLTSLEIIDCPNF 296
               L F+ +           ++P   ++L      E L  G   +F SL  L  +D    
Sbjct: 656  FEPLDFVVL----------NKEPKDNIQLLSL---EVLREGSPSLFPSLNELCWLD---- 698

Query: 297  ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
                     L   + L+ D   I ELP  L  L  L +L L  C ELE I SSI  L  +
Sbjct: 699  ---------LSHCDSLLRD--CIMELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKL 747

Query: 357  ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
                                            S L L  C  LE+ PSS+     L  L+
Sbjct: 748  --------------------------------SKLDLTYCESLETFPSSI-FKLKLKKLD 774

Query: 417  IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ--LALSKLKLKKCSSFESLPS 474
            +  C  L+  PD L   E    + +  T I+E+P SL    +AL  L LK CS   SLP+
Sbjct: 775  LHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPN 834

Query: 475  RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
             +     L+ ++   C +   +P+ IG+L  L+ L+++ + +  +PES+  LS+L+ L L
Sbjct: 835  SVVNLNYLSEIDCSGCCSLTEIPNNIGSLSSLRKLSLQESNVVNLPESIANLSNLKSLDL 894

Query: 535  SD-NNLQIIPE---SLNQLSSL----VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
            S    L+ IP+   SLNQL +     V   + N+ LE        LS++   D+F     
Sbjct: 895  SFCKRLECIPQLPSSLNQLLAYDCPSVGRMMPNSRLE--------LSAISDNDIF----- 941

Query: 587  RIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
                                       N  +LD    S I  + +++  +    Y +   
Sbjct: 942  ----------------------IFHFTNSQELDETVCSNIGAEAFLR--ITRGAYRSLFF 977

Query: 647  YFPGNEIPKWFRHQSTGSTISLKTPQ---PTGYNKLMGFAFCVVVA 689
             FPG+ +P  F ++ TGS ++++      P  Y +L GFA CVV+ 
Sbjct: 978  CFPGSAVPGRFPYRCTGSLVTMEKDSVDCPNNY-RLFGFALCVVLG 1022


>gi|22327500|ref|NP_198989.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007335|gb|AED94718.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 6   SEIQINPYTFSKMTELRLLK----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
            E+ ++   F  M  LR L+      G     +   ++ +P   LR   W ++P K+L  
Sbjct: 527 GEVSVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP--RLRLLYWDRYPRKSLPR 584

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               E LV L MP S +  LW  ++ L +LK I+L  S  L ++P+LS A NLE L L  
Sbjct: 585 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 644

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI  L+KLE+LD+  C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 645 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 704

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLESI--RIH 236
               TL    + IE++P S+ C S + +L I   S KRL ++   I  L    S   RI 
Sbjct: 705 --IKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPCITLLSLRGSGIERIT 762

Query: 237 RC----PNLQFLEMPSC 249
            C      L +L + SC
Sbjct: 763 DCVIGLTRLHWLNVDSC 779



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 57/277 (20%)

Query: 431 GNLEALEELRV----EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           G +E L  L++        ++E+P       L +L L+ C S   LPS +    +L  LE
Sbjct: 606 GGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSI---SNLHKLE 662

Query: 487 IID---CKNFMRLPDEIGNLEYLKVLTIKGTA---------------------IREVPES 522
           I+D   C     +P  I NL  L+ L + G +                     I +VP S
Sbjct: 663 ILDVKFCSMLQVIPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPS 721

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G  S L+ L +S  +L+ +   ++    +  L L  + +ERI + +  L+ L +L++  
Sbjct: 722 VGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGSGIERITDCVIGLTRLHWLNVDS 778

Query: 583 ----NNLDRIPEYLRSFPTSIPSEFTSLRLS-------VDLRNCLKLDPNELSEIIKDGW 631
                ++  +P  L+    +       +R S       +D  NCLKLD     E  K G 
Sbjct: 779 CRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFNNCLKLD-----EEAKRGI 833

Query: 632 MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           +++SV      ++ +  P  +IP+ F H++TG +I++
Sbjct: 834 IQRSV------SRYICLPCKKIPEEFTHKATGKSITI 864



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 36/198 (18%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++E+P  L +   L +L L++C  L  + SSI  L  +E +++  CS L+  P     NI
Sbjct: 625 LKEIPN-LSKATNLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQVIP----TNI 679

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           + + +ER     L ++ CS+L + P      K+L    I    K+E +P  +G    L++
Sbjct: 680 NLASLER-----LDVSGCSRLRTFPDISSNIKTL----IFGNIKIEDVPPSVGCWSRLDQ 730

Query: 439 LRV--------------------EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           L +                     G+GI  +   +  + L++L      S   L S L +
Sbjct: 731 LHISSRSLKRLMHVPPCITLLSLRGSGIERITDCV--IGLTRLHWLNVDSCRKLKSILGL 788

Query: 479 SKSLTSLEIIDCKNFMRL 496
             SL  L+  DC +  R+
Sbjct: 789 PSSLKVLDANDCVSLKRV 806


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 156/338 (46%), Gaps = 45/338 (13%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL 331
           SLP    +    T+L  +D  +  F  +PD LG+L  L  L +    + ELPE LG L+ 
Sbjct: 43  SLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSA 102

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L++  L N + L  I   + +L  +  + +                              
Sbjct: 103 LTEFVL-NGNRLAQIPIWVRQLTELTDLAL------------------------------ 131

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
              + +KL  LP  L   K L SL++    ++  +P  LG+L AL EL + G  + E+P+
Sbjct: 132 ---RDNKLTELPEFLGGLKKLASLDV-GSNRISAVPSSLGDLAALSELDLSGNRLVEIPR 187

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           +L +L AL++L L   +    LP+ L    +L+ L ++      RLP E+  L  L+ L 
Sbjct: 188 TLGKLTALTELNLD-FNRLAELPASLGELANLSHL-LLGSNRLTRLPAELSGLTALRWLN 245

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    + E+P   G  ++L  + L  N L  +PE+L  L++L SL L  N L  +P  + 
Sbjct: 246 LDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTELPASMA 305

Query: 571 PLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL 608
            L++L  LDL +N L  +P ++   P       TSLRL
Sbjct: 306 GLTALTSLDLGDNELTDLPAWVGDLPA-----LTSLRL 338



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 133/314 (42%), Gaps = 68/314 (21%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL---------LTKLPDLSLAQNLEIL 116
            L  L +  +++ +L + + NL +L    L  ++L         LT+L DL+L  N    
Sbjct: 79  GLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDLALRDN---- 134

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL---K 172
                  LTE    +  L KL  LD+   + ++++P+S+     L  L L G   +   +
Sbjct: 135 ------KLTELPEFLGGLKKLASLDVGSNR-ISAVPSSLGDLAALSELDLSGNRLVEIPR 187

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
            L K+T+    + L L    + ELP+S+  L+N+  LL+ S  RL  + + +  L  L  
Sbjct: 188 TLGKLTAL---TELNLDFNRLAELPASLGELANLSHLLLGS-NRLTRLPAELSGLTALRW 243

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + + R                        +EL          LP     F +LT + +  
Sbjct: 244 LNLDR------------------------NELT--------ELPPWAGGFTALTGINL-- 269

Query: 293 CPNFER---LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
              F R   LP+ LG L AL  L + G  + ELP  +  L  L+ L+L + +EL  + + 
Sbjct: 270 --GFNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGD-NELTDLPAW 326

Query: 350 IFKLKSVESIEISN 363
           +  L ++ S+ +  
Sbjct: 327 VGDLPALTSLRLDG 340


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 72/336 (21%)

Query: 299 LPDELGNLQALNRLIID--------------GTAIRELPEGLGQLALLSKLELKNCSELE 344
           LP ++G L  L +LI+               G  +  LP  +GQL  L +L++   ++L+
Sbjct: 31  LPPDIGKLTHLKKLILGKYQYDDEGDIAGFIGNKLSALPREIGQLHQLEELQIA-LNQLQ 89

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
            +   I +L S++S+ +                                  C+K++ LP 
Sbjct: 90  ELPPEILQLTSLQSLNLG---------------------------------CNKIQELPP 116

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
            +    SL SL++    K++ LP E+G L +L+ L + G  I+E+P  + QL AL  L L
Sbjct: 117 EIGQLTSLQSLDL-RYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDL 175

Query: 464 KKCSSFESLPSRLYVSKSLTSLEI----------------------IDCKNFMRLPDEIG 501
              ++ + LP +++   SL SL +                      +       LP EI 
Sbjct: 176 SFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEIL 235

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
            L  L+ L +    I+E+P  + QL+SL+ L L  NN+Q +P  + QL+SL SL L  NN
Sbjct: 236 QLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNN 295

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
           ++ +P  +  L+SL+ L+L  NN+  +P  +R  P 
Sbjct: 296 IQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPN 331



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 16/298 (5%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L  L  L I    ++ELP  + QL  L  L L  C++++ +   I +L S++S
Sbjct: 68  LPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNL-GCNKIQELPPEIGQLTSLQS 126

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEI 417
           +++      +  PEI              +S+  LN   + ++ LP  +    +L SL++
Sbjct: 127 LDLRYNKIQELPPEIGQL-----------TSLQSLNLSGNNIQELPPEIGQLTALQSLDL 175

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRL 476
                ++ LP ++  L +L+ L +    I+E+P  + QL +L  L L   +  + LP+ +
Sbjct: 176 SFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLS-FNKIQELPAEI 234

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
               SL SL +        LP EI  L  L+ L +    I+E+P  + QL+SL+ L L  
Sbjct: 235 LQLTSLQSLHL-SFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGG 293

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
           NN+Q +P  + QL+SL SL L +NN++ +P  +  L +LK LDL  N L   PE L S
Sbjct: 294 NNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPEILGS 351



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 176/396 (44%), Gaps = 53/396 (13%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           + LP       SL SL +  C   + LP E+G L +L  L +    I+ELP  +GQL  L
Sbjct: 89  QELPPEILQLTSLQSLNL-GCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSL 147

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
             L L + + ++ +   I +L +++S+++S  +N++  P   F       +  + S  L 
Sbjct: 148 QSLNL-SGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIF------QLTSLQSLHLS 200

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            N   K++ LP+ +    SL SL  +   K++ LP E+  L +L+ L +    I+E+P  
Sbjct: 201 FN---KIQELPAEILQLTSLQSLH-LSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAE 256

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           + QL                        SL SL +    N   LP EI  L  L+ L + 
Sbjct: 257 ILQLT-----------------------SLQSLNLY-SNNIQELPPEILQLTSLQSLNLG 292

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL--- 569
           G  I+E+P  + QL+SL+ L L  NN+Q +P  + QL +L  L L +N L   PE L   
Sbjct: 293 GNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPEILGSK 352

Query: 570 ----DPLSSLKYLDLF---ENNLDRIPEYLRSFPTSIPSEFTSLRLSVDL-RNCLKLDPN 621
               DP    + LD +   ++  +  P Y   F            L+  + R   +L P+
Sbjct: 353 EWYEDPGDVQEILDFYFRIQDPTETAPLYEAKFIIVGEGAAGKTTLAKKIERETYQLQPD 412

Query: 622 ELS----EIIKDGWMKQSVNGETYITKSMYFPGNEI 653
           E S    ++I+  W     NG+ +      F G EI
Sbjct: 413 EKSTQGIDVIQ--WHFPHANGQDFRVNIWDFGGQEI 446



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 159/362 (43%), Gaps = 75/362 (20%)

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
            +G  +  LP  I  L  + EL I +  +L+ +   I +L  L+S+ +            
Sbjct: 60  FIGNKLSALPREIGQLHQLEELQI-ALNQLQELPPEILQLTSLQSLNL------------ 106

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC--PNFERLPDELGN 305
            CN              K+++ P PE           LTSL+ +D      + LP E+G 
Sbjct: 107 GCN--------------KIQELP-PE--------IGQLTSLQSLDLRYNKIQELPPEIGQ 143

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           L +L  L + G  I+ELP  +GQL  L  L+L   + ++ +   IF+L S++S+ +S   
Sbjct: 144 LTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLS--- 200

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
                                          +K++ LP+ +    SL SL  +   K++ 
Sbjct: 201 ------------------------------FNKIQELPAEILQLTSLQSLH-LSFNKIQE 229

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           LP E+  L +L+ L +    I+E+P  + QL +L  L L   ++ + LP  +    SL S
Sbjct: 230 LPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNL-YSNNIQELPPEILQLTSLQS 288

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L  +   N   LP EI  L  L+ L ++   I+E+P  + QL +L+ L L  N L I PE
Sbjct: 289 LN-LGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPE 347

Query: 545 SL 546
            L
Sbjct: 348 IL 349



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 48/285 (16%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           IL   +L SL +  +K+ +L  ++  L SL+ +DL+Y+K+    P++    +L+ L+L  
Sbjct: 95  ILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLS- 153

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            +++ E    I  L  L+ LDL    ++  LP  I                  L  + S 
Sbjct: 154 GNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQ----------------LTSLQSL 197

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RI 235
           HL          I+ELP+ I  L+++  L + S  +++ + + I +L  L+S+     +I
Sbjct: 198 HLSFN------KIQELPAEILQLTSLQSLHL-SFNKIQELPAEILQLTSLQSLHLSFNKI 250

Query: 236 HRCPN--LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
              P   LQ   + S N+     +E P   L+L                 SL SL  +  
Sbjct: 251 QELPAEILQLTSLQSLNLYSNNIQELPPEILQL----------------TSLQSLN-LGG 293

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            N + LP E+  L +L  L +    I+ELP  + QL  L KL+L+
Sbjct: 294 NNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLR 338



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 41/286 (14%)

Query: 74  GSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQY 133
           G+K++ L  ++  L  L+ + +  ++L    P++    +L+ L+LG C+ + E    I  
Sbjct: 62  GNKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLG-CNKIQELPPEIGQ 120

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
           L  L+ LDL R   +  LP  I                    ++TS     +L L G  I
Sbjct: 121 LTSLQSLDL-RYNKIQELPPEIG-------------------QLTSLQ---SLNLSGNNI 157

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCPN--LQFLEM 246
           +ELP  I  L+ +  L +     ++ +   IF+L  L+S+     +I   P   LQ   +
Sbjct: 158 QELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSL 217

Query: 247 PSCNIDGTRSKEQPSSELKLKKCP-------RPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            S ++   + +E P+  L+L           + + LP+      SL SL +    N + L
Sbjct: 218 QSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSN-NIQEL 276

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK--NCSEL 343
           P E+  L +L  L + G  I+ELP  + QL  L  L L+  N  EL
Sbjct: 277 PPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQEL 322


>gi|110738533|dbj|BAF01192.1| resistence protein - like [Arabidopsis thaliana]
          Length = 924

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 117/220 (53%), Gaps = 9/220 (4%)

Query: 9   QINPYTFSKMTELRLLKF--CGSKNKC---MVHSLEGVPFTELRYFEWHQFPLKTL-NIL 62
           +++P  F KM  LRLLKF    S N+C   + H L+ +P  EL    W  +PL  L    
Sbjct: 699 ELSPTVFGKMYNLRLLKFYCSTSGNQCKLTLPHGLDTLP-DELSLLHWENYPLVYLPQKF 757

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           +  NLV L MP S + +LW+  +NL  LK I L +S+ LT +  LS A NLE +DL  C+
Sbjct: 758 NPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCT 817

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL +   SI    KL  L++  C  L SLP+ +    LK L L GCS  +++        
Sbjct: 818 SLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPN-- 875

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
              + L G  I ELP SI+ L+ +  L + +C+RL+ + S
Sbjct: 876 LEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 915



 Score = 45.8 bits (107), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 16/158 (10%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPFCN 377
           + +L EG   L  L  ++L +  EL  I   + +  ++E I++  C++L      IP C 
Sbjct: 772 MEKLWEGKKNLEKLKNIKLSHSRELTDILM-LSEALNLEHIDLEGCTSLIDVSMSIPCCG 830

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
                  ++ S  L +  CS+L SLPS +    +L  L +  C + E + D   NLE   
Sbjct: 831 -------KLVS--LNMKDCSRLRSLPS-MVDLTTLKLLNLSGCSEFEDIQDFAPNLE--- 877

Query: 438 ELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
           E+ + GT IRE+P S+  L  L  L L+ C   + +PS
Sbjct: 878 EIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 915



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIR 320
           L +K C R  SLPS       LT+L++++   C  FE + D   NL+    + + GT+IR
Sbjct: 835 LNMKDCSRLRSLPS----MVDLTTLKLLNLSGCSEFEDIQDFAPNLE---EIYLAGTSIR 887

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISS 348
           ELP  +  L  L  L+L+NC  L+ + S
Sbjct: 888 ELPLSIRNLTELVTLDLENCERLQEMPS 915


>gi|7268442|emb|CAB80962.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1072

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 175/386 (45%), Gaps = 57/386 (14%)

Query: 10  INPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWENLV 68
           I+  +F  M  L+ L   G     +  SL  +P  +LR  +W + PLK L      + L+
Sbjct: 504 IDEKSFQGMRNLQCLSVTGDYMD-LPQSLVYLP-PKLRLLDWDRCPLKCLPYSFKADYLI 561

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
            L M GSK+ +LW+    L SLKR+++  S+ L ++ DLS A+NLE L+L  C SL    
Sbjct: 562 QLTMMGSKLEKLWEGTVPLGSLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLS 621

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           SSIQ   KL  LD+  C  L S PT +              NL++L  + +C     LP 
Sbjct: 622 SSIQNAIKLIYLDMRGCTKLESFPTHL--------------NLESLEYLENCIWNKNLP- 666

Query: 189 LGVGIEELPSSIKCL------SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              G++ L   ++C+      +++  L++   + LE +   +  L  L  + +  C NL 
Sbjct: 667 ---GLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLT 723

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
             E+P        SK      L L  C    ++PS     + L  LE+ +C   E LP +
Sbjct: 724 --EIPDL------SKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTD 775

Query: 303 LGNLQALNRLIIDG---------------------TAIRELPEGLGQLALLSKLELKNCS 341
           + NL +L  L + G                     TAI E+P  +   + L+ L +  C 
Sbjct: 776 V-NLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCCIENFSWLTVLMMYCCK 834

Query: 342 ELEYISSSIFKLKSVESIEISNCSNL 367
            L+ IS +IF+L  ++ ++ + C  +
Sbjct: 835 RLKNISPNIFRLTILKLVDFTECRGV 860



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 26/300 (8%)

Query: 296 FERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            E+L +    L +L R+ + G+  +RE+ + L     L +L L  C  L  +SSSI    
Sbjct: 570 LEKLWEGTVPLGSLKRMNMHGSRYLREISD-LSNARNLEELNLSECRSLVTLSSSIQNAI 628

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK---- 410
            +  +++  C+ L+ FP     +++   +E + + +   N    L  L    C+ +    
Sbjct: 629 KLIYLDMRGCTKLESFP----THLNLESLEYLENCIWNKN----LPGLDYLACLVRCMPC 680

Query: 411 -----SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLALSKLKLK 464
                 L  L +   + LE+L + + +L +L E+ +   G + E+P       L  L L 
Sbjct: 681 EFRPNDLVRLIVRGNQMLEKLWEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLS 740

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESL 523
            C S  ++PS +   + L  LE+ +C     LP ++ NL  LK+L + G +++R  P   
Sbjct: 741 NCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLI- 798

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFE 582
               S++WL L +  ++ +P  +   S L  L +     L+ I   +  L+ LK +D  E
Sbjct: 799 --SKSIKWLYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKNISPNIFRLTILKLVDFTE 856



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 33/289 (11%)

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L +L + G+ + +L EG   L  L ++ +     L  IS  +   +++E + +S C +L 
Sbjct: 560 LIQLTMMGSKLEKLWEGTVPLGSLKRMNMHGSRYLREISD-LSNARNLEELNLSECRSL- 617

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL----------CMF-KSLTSLE- 416
                    +  S    I    L +  C+KLES P+ L          C++ K+L  L+ 
Sbjct: 618 -------VTLSSSIQNAIKLIYLDMRGCTKLESFPTHLNLESLEYLENCIWNKNLPGLDY 670

Query: 417 ---IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
              ++ C   E  P++L  L       +E   + E  +SLA L   ++ + +C +   +P
Sbjct: 671 LACLVRCMPCEFRPNDLVRLIVRGNQMLEK--LWEGVQSLASLV--EMDMSECGNLTEIP 726

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             L  + +L +L + +CK+ + +P  IGNL+ L  L +K     EV  +   LSSL+ L 
Sbjct: 727 D-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLVRLEMKECTGLEVLPTDVNLSSLKMLD 785

Query: 534 LSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
           LS  ++L+  P       S+  L L N  +E +P  ++  S L  L ++
Sbjct: 786 LSGCSSLRTFPLISK---SIKWLYLENTAIEEVPCCIENFSWLTVLMMY 831


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 233/511 (45%), Gaps = 87/511 (17%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLN 135
           +T L   ++N+  L  I L Y   L K+PD L    NL IL L   + LT   +S+Q L 
Sbjct: 62  LTSLSTTIKNMTQLCEIFL-YQNKLAKVPDELGQLVNLTILALNE-NHLTSLPASLQNLK 119

Query: 136 KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
           +L++LDL R   L  +P  ++  + L++L LR         K+T+               
Sbjct: 120 QLKMLDL-RHNKLREVPQVVYQLQSLRKLYLR-------FNKITT--------------- 156

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            +  +I+ LSN+ +L+I   K  E I S I KL  L +I +                   
Sbjct: 157 -IDPAIENLSNLTQLIIRENKVRE-IPSEIGKLTQLVTIDV------------------- 195

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
                  S  +LK+ P       G C   +   L+        +LP+ +GNL  LNRL +
Sbjct: 196 -------SYNELKEIPEE----IGNCRLVTFLDLQY---NRLTQLPESIGNLVKLNRLGL 241

Query: 315 DGTAIRELPEGLGQLALLSKLELKN----------CSELEYISSSIFKLKSVESIEISNC 364
               +  LP  L    LLS L L+N           S L  ++S         S  +   
Sbjct: 242 KYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGP 301

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLK-------LN-KCSKLESLPSSLCMFKSLTSLE 416
           S    F  +   N++ + ++RIP  +         LN + ++L SLP  +  +KS+  L 
Sbjct: 302 SQ---FTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVEL- 357

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
            ++  +L RLPD++G L++L+ L V    +R++P S+ QL  L  L L++ ++ ESLPS 
Sbjct: 358 CLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEE-NNLESLPSE 416

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           +     L  L++   K    LP  +G+L  L +L +    +R++P  +G L SLE L L+
Sbjct: 417 IEHLTQLRKLKLQGNK-LTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLN 475

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           DN LQ++P  L   + L  + + +  L +IP
Sbjct: 476 DNPLQVLPFELALCTKLALMSVEDCPLSQIP 506



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 165/356 (46%), Gaps = 71/356 (19%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK------------NCSELEY- 345
           LP  L NL+ L  L +    +RE+P+ + QL  L KL L+            N S L   
Sbjct: 111 LPASLQNLKQLKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQL 170

Query: 346 ---------ISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS 389
                    I S I KL  + +I++S  + LK  PE       + F ++  + + ++P S
Sbjct: 171 IIRENKVREIPSEIGKLTQLVTIDVS-YNELKEIPEEIGNCRLVTFLDLQYNRLTQLPES 229

Query: 390 V---LKLN----KCSKLESLPSSL--CMFKSLTSLEIIDCKKLERLPD----ELGNLEA- 435
           +   +KLN    K + L  LP SL  C+  S  +LE  D   +E LPD     L NL + 
Sbjct: 230 IGNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENND---IETLPDGFLSSLTNLTSV 286

Query: 436 --------------------LEELRVEGTGIREVPKSLAQLA--LSKLKLKKCSSFESLP 473
                               L  L +E   +  +P  +   A  LS L ++  +   SLP
Sbjct: 287 TLARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMR-SNQLTSLP 345

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             +   KS+  L  ++     RLPD+IG L+ L+VL +    +R++P S+GQL++L+ L 
Sbjct: 346 LDVGSWKSMVEL-CLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLD 404

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L +NNL+ +P  +  L+ L  LKL  N L  +P  L  LS+L  L + EN +  +P
Sbjct: 405 LEENNLESLPSEIEHLTQLRKLKLQGNKLTVLPRGLGHLSNLTILAVGENQMRDLP 460



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 79/388 (20%)

Query: 275 LPSGQCMFKSLTSL-EIIDCPN-FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           L S     K++T L EI    N   ++PDELG L  L  L ++   +  LP  L  L  L
Sbjct: 62  LTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQL 121

Query: 333 SKLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCNIDG 380
             L+L++ ++L  +   +++L+S+  +             I N SNL          I  
Sbjct: 122 KMLDLRH-NKLREVPQVVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLI------IRE 174

Query: 381 SGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
           + +  IPS + KL +        ++L+ +P  +   + +T L++    +L +LP+ +GNL
Sbjct: 175 NKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDL-QYNRLTQLPESIGNL 233

Query: 434 EALEELRVEGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVS------------- 479
             L  L ++   +  +P+SL   + LS L L+  +  E+LP     S             
Sbjct: 234 VKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLEN-NDIETLPDGFLSSLTNLTSVTLARNK 292

Query: 480 ---------KSLTSLEIIDCKN----------FMR----------------LPDEIGNLE 504
                       TSL  ++ ++          F R                LP ++G+ +
Sbjct: 293 FSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWK 352

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            +  L +    +  +P+ +G+L SL+ L++S+N L+ IP S+ QL++L  L L  NNLE 
Sbjct: 353 SMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLES 412

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  ++ L+ L+ L L  N L  +P  L
Sbjct: 413 LPSEIEHLTQLRKLKLQGNKLTVLPRGL 440



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 25/230 (10%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           +KL  +P  L    +LT L + +   L  LP  L NL+ L+ L +    +REVP+ + QL
Sbjct: 83  NKLAKVPDELGQLVNLTILAL-NENHLTSLPASLQNLKQLKMLDLRHNKLREVPQVVYQL 141

Query: 457 -ALSKLKLK--KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            +L KL L+  K ++ +     L    +LT L II       +P EIG L  L  + +  
Sbjct: 142 QSLRKLYLRFNKITTIDPAIENL---SNLTQL-IIRENKVREIPSEIGKLTQLVTIDVSY 197

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             ++E+PE +G    + +L L  N L  +PES+  L  L  L L  N+L  +P  L    
Sbjct: 198 NELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQNCV 257

Query: 574 SLKYLDLFENNLDRIPE-----------------YLRSFPTSIPSEFTSL 606
            L  L+L  N+++ +P+                    S+P   PS+FTSL
Sbjct: 258 LLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSL 307



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 185/433 (42%), Gaps = 86/433 (19%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA-QNLEILDLGYCSSL 124
           NL  L +  + +T L   +QNL  LK +DL+++K L ++P +    Q+L  L L + + +
Sbjct: 97  NLTILALNENHLTSLPASLQNLKQLKMLDLRHNK-LREVPQVVYQLQSLRKLYLRF-NKI 154

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS--NLKNLP-KMTSCH 181
           T    +I+ L+ L  L + R   +  +P+ I    L +LV    S   LK +P ++ +C 
Sbjct: 155 TTIDPAIENLSNLTQL-IIRENKVREIPSEIGK--LTQLVTIDVSYNELKEIPEEIGNCR 211

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGEL-----------------LIYSCKRLENISSSI 224
           L + L L    + +LP SI  L  +  L                 ++ S   LEN     
Sbjct: 212 LVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIET 271

Query: 225 FKLQFLESIRIHRCPNL--------------QFLEMPSCNIDGTRSKEQPS--------- 261
               FL S+       L              QF  + + N++  +    P          
Sbjct: 272 LPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHL 331

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
           S L ++   +  SLP     +KS+  L  ++     RLPD++G LQ+L  L++    +R+
Sbjct: 332 STLNMRSN-QLTSLPLDVGSWKSMVEL-CLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRK 389

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           +P  +GQL  L  L+L+  + LE + S I  L  +  +++                    
Sbjct: 390 IPGSIGQLTNLQCLDLEE-NNLESLPSEIEHLTQLRKLKL-------------------- 428

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                        + +KL  LP  L    +LT L + +  ++  LP+E+GNL++LEEL +
Sbjct: 429 -------------QGNKLTVLPRGLGHLSNLTILAVGE-NQMRDLPNEIGNLKSLEELYL 474

Query: 442 EGTGIREVPKSLA 454
               ++ +P  LA
Sbjct: 475 NDNPLQVLPFELA 487



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 147/350 (42%), Gaps = 73/350 (20%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLL---------TKLPDLSLAQN-LEILDLG 119
           L +  +++TQL + + NLV L R+ LKY+ LL           L DL+L  N +E L  G
Sbjct: 216 LDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDG 275

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKNLPKMT 178
           + SSLT   S     NK     +      TSL T ++    + R+     S         
Sbjct: 276 FLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSR-------- 327

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
           + HL STL +    +  LP  +    ++ EL + S  +L  +   I KLQ L+ +     
Sbjct: 328 ATHL-STLNMRSNQLTSLPLDVGSWKSMVELCLNS-NQLTRLPDDIGKLQSLQVL----- 380

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP--NF 296
                  M S N+              L+K P              LT+L+ +D    N 
Sbjct: 381 -------MVSNNL--------------LRKIP---------GSIGQLTNLQCLDLEENNL 410

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           E LP E+ +L  L +L + G  +  LP GLG L+ L+ L +   +++  + + I  LKS+
Sbjct: 411 ESLPSEIEHLTQLRKLKLQGNKLTVLPRGLGHLSNLTILAVGE-NQMRDLPNEIGNLKSL 469

Query: 357 ESI------------EISNCSNLK--GFPEIPFCNIDGSGIERIPSSVLK 392
           E +            E++ C+ L      + P   I    +E  PS++++
Sbjct: 470 EELYLNDNPLQVLPFELALCTKLALMSVEDCPLSQIPTLAVEGGPSTIMQ 519


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 234/527 (44%), Gaps = 73/527 (13%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL SL +  +++T L  +++ L  LK + L  ++L T   ++   Q LE L LG  + L
Sbjct: 62  QNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLG-GNQL 120

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           T     I  L  LE L L     L +LP  I +            +L+ L  + +  LR+
Sbjct: 121 TTIPQEIGALQDLEELSL-YNNQLITLPQEIGT----------LQDLEEL-NLANNQLRT 168

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                      LP  I  L ++ +L +++  +L  +   I  LQ L+ +R+      Q  
Sbjct: 169 -----------LPKEIGTLQHLQDLNVFN-NQLITLPQEIGTLQNLKYLRLAYN---QLT 213

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            +P                   K+  R E+L         L +L           P E+G
Sbjct: 214 TLP-------------------KEIGRLENLQDLNVFNNQLITL-----------PQEIG 243

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            LQ L  L ++   +  LP+ +G L  L  L L N ++L  +   I KL+ +E + ++N 
Sbjct: 244 TLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTN-NQLATLPKEIGKLQRLEWLGLAN- 301

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           + LK  P+      +   ++ +   +L+ N+   LES P  +    +L  L + +     
Sbjct: 302 NQLKSLPQ------EIGKLQNLKELILENNR---LESFPKEIGTLSNLQRLHL-EYNGFT 351

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLT 483
            LP E+G L  L  L +E   +  +P+ + +L  L  L L   +   +LP  +   + L 
Sbjct: 352 TLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN-NRLATLPKEIGTLRKLQ 410

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + + +    LP EIG L+ L+ L ++   +  +PE++G L  LEWL L +N L  +P
Sbjct: 411 HLYLANNQ-LATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLP 469

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           E +  L  +V L L+NN L  +P+ +  L +LK LDL  N     P+
Sbjct: 470 EEIGTLQKIVKLNLANNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQ 516



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 166/390 (42%), Gaps = 70/390 (17%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L++  +++T L  ++  L +L+ +++  ++L+T   ++   QNL+ L+L   + L
Sbjct: 200 QNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLE-NNRL 258

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                 I  L KLE L L   + L +LP  I    L+RL   G +N           L+S
Sbjct: 259 ITLPKEIGTLQKLEWLYLTNNQ-LATLPKEIGK--LQRLEWLGLAN---------NQLKS 306

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                      LP  I  L N+ E LI    RLE+    I  L  L+  R+H   N  F 
Sbjct: 307 -----------LPQEIGKLQNLKE-LILENNRLESFPKEIGTLSNLQ--RLHLEYN-GFT 351

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            +P     GT  +                 LP        LT+           LP E+G
Sbjct: 352 TLPQE--IGTLHR-----------------LPWLNLEHNQLTT-----------LPQEIG 381

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            L+ L  L +    +  LP+ +G L  L  L L N ++L  +   I +L+++E +++   
Sbjct: 382 RLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLAN-NQLATLPKEIGQLQNLEDLDLE-Y 439

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           + L   PE          ++R+    LK N+ +   +LP  +   + +  L + +  +L 
Sbjct: 440 NQLATLPEAI------GTLQRLEWLSLKNNQLT---TLPEEIGTLQKIVKLNLAN-NQLR 489

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLA 454
            LP E+G L+ L++L + G      P+ + 
Sbjct: 490 TLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 519



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 13/90 (14%)

Query: 531 WLV-LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           W++ L+ N L ++P+ + +L +L SL L NN L  +P+ ++ L  LK+L L EN L  +P
Sbjct: 42  WMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLP 101

Query: 590 EYLRSFP------------TSIPSEFTSLR 607
           + +                T+IP E  +L+
Sbjct: 102 KEIGKLQRLERLYLGGNQLTTIPQEIGALQ 131


>gi|296089378|emb|CBI39197.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 54/341 (15%)

Query: 32  KCMVHSLEGVPF--TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSK-VTQLWDDVQNL 87
           +C +H  +   F   ELRY  W ++P ++L      ENLV   MP S+ +TQLW   +  
Sbjct: 2   QCKLHVSDDFKFHYDELRYLHWDEYPCESLPFDFESENLVHFCMPRSRHLTQLWKGQKVF 61

Query: 88  VSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKS 147
            +L+ +D+ YS+ L + PD S A NLE+L L  C++L + H S+ YL+KL +L+L+ C +
Sbjct: 62  GNLEFVDVSYSQYLKETPDFSRATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNLENCTN 121

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           L  LP+      L+ L+L GCS L+ LP++        +P L         S  CL    
Sbjct: 122 LEHLPSIRWLVSLETLILSGCSKLEKLPEVP-----QHMPYL---------SKLCLDGTA 167

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK 267
                    L N   +   L  L  +      +    ++PS ++        PSS  +  
Sbjct: 168 ITDFSGWSELGNFQENSGNLDCLNEL---NSDDSTIRQLPSSSVVLRNHNASPSSAPRRS 224

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
              RP       C   SLT L                         + GT+I  LP  L 
Sbjct: 225 HSIRP------HCTLTSLTYLN------------------------LSGTSIIRLPWNLE 254

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           +L +L +LEL NC  L+ +        S+E +  SNC++L+
Sbjct: 255 RLFMLQRLELTNCRRLQALP---VLPSSIERMNASNCTSLE 292



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 187/434 (43%), Gaps = 78/434 (17%)

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKK 465
           +F +L  +++   + L+  PD       LE L ++G T +R+V  SL  L+ L  L L+ 
Sbjct: 60  VFGNLEFVDVSYSQYLKETPD-FSRATNLEVLVLKGCTNLRKVHPSLGYLSKLILLNLEN 118

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP----- 520
           C++ E LPS  ++  SL +L +  C    +LP+   ++ YL  L + GTAI +       
Sbjct: 119 CTNLEHLPSIRWL-VSLETLILSGCSKLEKLPEVPQHMPYLSKLCLDGTAITDFSGWSEL 177

Query: 521 ----ESLGQLSSLEWLVLSDNNLQIIPES-----------------------LNQLSSLV 553
               E+ G L  L  L   D+ ++ +P S                          L+SL 
Sbjct: 178 GNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNHNASPSSAPRRSHSIRPHCTLTSLT 237

Query: 554 SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI----PSEFTSLRL- 608
            L LS  ++ R+P  L+ L  L+ L+L   N  R+ + L   P+SI     S  TSL L 
Sbjct: 238 YLNLSGTSIIRLPWNLERLFMLQRLEL--TNCRRL-QALPVLPSSIERMNASNCTSLELV 294

Query: 609 ----------------SVDLRNC---LKLDPNEL-SEIIKDGWMK--QSVNGETYITKSM 646
                              LRNC   ++ D   + S ++   W     S +    I  S 
Sbjct: 295 SPQSVFKRFGGFLFGNCFKLRNCHSKMEHDVQSVASHVVPGAWRSTYASWHPNVGIPFST 354

Query: 647 YFPGNEIPKWFRHQSTGSTISLKTPQPTGY--NKLMGFAFCVVVACSVSECCRHESVEDD 704
            FPG+EIP WFRH S G  I+++ P P  Y  +  +GFA   V+A       +H+S    
Sbjct: 355 VFPGSEIPDWFRHHSQGHEINIEVP-PDWYINSNFLGFALSAVMA------PQHDSRAWY 407

Query: 705 RKCNLFDVVCDRRSEGYDSYTSSYLGKISH--VESDHVFLGSSIFAGENSCKRSDEFFFH 762
             C+L     +  S    S+  S+  ++ H  +ESDHV+L         SC++     F 
Sbjct: 408 MYCDLDTHDLNSNSHRICSFFGSWTYQLQHTPIESDHVWLAYVPSFLSFSCEKWSHIKFS 467

Query: 763 IDRS-CCEVKKCGI 775
              S  C VK CG 
Sbjct: 468 FSSSGGCVVKSCGF 481


>gi|110742324|dbj|BAE99086.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 575

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 6   SEIQINPYTFSKMTELRLLK----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
            E+ ++   F  M  LR L+      G     +   ++ +P   LR   W ++P K+L  
Sbjct: 56  GEVSVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP--RLRLLYWDRYPRKSLPR 113

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               E LV L MP S +  LW  ++ L +LK I+L  S  L ++P+LS A NLE L L  
Sbjct: 114 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI  L+KLE+LD+  C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 174 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 233

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLESI--RIH 236
               TL    + IE++P S+ C S + +L I   S KRL ++   I  L    S   RI 
Sbjct: 234 --IKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPCITLLSLRGSGIERIT 291

Query: 237 RC----PNLQFLEMPSC 249
            C      L +L + SC
Sbjct: 292 DCVIGLTRLHWLNVDSC 308



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 57/277 (20%)

Query: 431 GNLEALEELRV----EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           G +E L  L++        ++E+P       L +L L+ C S   LPS +    +L  LE
Sbjct: 135 GGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSI---SNLHKLE 191

Query: 487 IID---CKNFMRLPDEIGNLEYLKVLTIKGTA---------------------IREVPES 522
           I+D   C     +P  I NL  L+ L + G +                     I +VP S
Sbjct: 192 ILDVKFCSMLQVIPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPS 250

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G  S L+ L +S  +L+ +   ++    +  L L  + +ERI + +  L+ L +L++  
Sbjct: 251 VGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGSGIERITDCVIGLTRLHWLNVDS 307

Query: 583 ----NNLDRIPEYLRSFPTSIPSEFTSLRLS-------VDLRNCLKLDPNELSEIIKDGW 631
                ++  +P  L+    +       +R S       +D  NCLKLD     E  K G 
Sbjct: 308 CRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFNNCLKLD-----EEAKRGI 362

Query: 632 MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           +++SV      ++ +  P  +IP+ F H++TG +I++
Sbjct: 363 IQRSV------SRYICLPCKKIPEEFTHKATGKSITI 393


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 172/386 (44%), Gaps = 65/386 (16%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWE 65
           EI+++    SKM+ L+LLK  G  +   ++ L      EL Y  W ++P   L       
Sbjct: 562 EIRVD--ALSKMSHLKLLKLWGVTSSGSLNHLS----DELGYITWDKYPFVCLPKSFQPN 615

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L +  S +  LW D + L +L+R+ L +SK L +LPDL  A NLE LDL  C  L 
Sbjct: 616 KLVELCLEYSNIKHLWKDRKPLHNLRRLVLSHSKNLIELPDLGEALNLEWLDLKGCIKLK 675

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST 185
           + + SI  L KL  L+L  C SL  LP       L+ L L GC++LK++    S  L   
Sbjct: 676 KINPSIGLLRKLAYLNLKDCTSLVELPHFKEDLNLQHLTLEGCTHLKHIN--PSVGLLRK 733

Query: 186 LPLLGV----GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           L  L +     +  LP+SI CL+++  L +Y C  L N  S + K            P  
Sbjct: 734 LEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSGLYN--SGLLKE-----------PRD 780

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE-------------SLPSGQCMFKSLTSL 288
             L    C  + +   +  SS +K      P               LPS   +  S+  L
Sbjct: 781 AELLKQLCIGEASTDSKSISSIVKRWFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQL 840

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           ++  C N  ++PD +GNL  L  L ++G +   LP            +LK  S+L Y   
Sbjct: 841 DLSYC-NLVQIPDAIGNLHCLEILNLEGNSFAALP------------DLKGLSKLRY--- 884

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIP 374
                     +++ +C +LK FP++P
Sbjct: 885 ----------LKLDHCKHLKDFPKLP 900



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 50/352 (14%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
            L L  C KL+ +  S+ + + L  L + DC  L  LP    +L  L+ L +EG T ++ +
Sbjct: 666  LDLKGCIKLKKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDLN-LQHLTLEGCTHLKHI 724

Query: 450  PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR--LPDEIGNLEYL 506
              S+  L  L  L L+ C S  SLP+ +    SL  L +  C       L  E  + E L
Sbjct: 725  NPSVGLLRKLEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELL 784

Query: 507  KVLTI-----KGTAIREVPESLGQLSSLEWLVLSDNNLQ--IIPESLNQLSSLVSLKLSN 559
            K L I        +I  + +     S   W   + N+    ++P +     S++ L LS 
Sbjct: 785  KQLCIGEASTDSKSISSIVKRWFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQLDLSY 844

Query: 560  NNLERIPERLDPLSSLKYLDLFENNLDRIPE----------------YLRSFPTSIPSEF 603
             NL +IP+ +  L  L+ L+L  N+   +P+                +L+ FP  +P+  
Sbjct: 845  CNLVQIPDAIGNLHCLEILNLEGNSFAALPDLKGLSKLRYLKLDHCKHLKDFP-KLPART 903

Query: 604  TSLR----LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY------------ 647
             ++     L + + NC +L   E    +   WM Q V        + +            
Sbjct: 904  ANVELPRALGLSMFNCPELVEREGCSSMVLSWMIQIVQAHYQNNFAWWPIGMPGFSNPYI 963

Query: 648  ---FPGNEIPKWF--RHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSE 694
                PG+EI  WF  +H S  + I++  P    ++K +G A+CVV A   ++
Sbjct: 964  CSVIPGSEIEGWFTTQHVSKDNLITIDPPPLMQHDKCIGVAYCVVFAAHSTD 1015


>gi|334186702|ref|NP_001190772.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
           protein [Arabidopsis thaliana]
 gi|332658791|gb|AEE84191.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
           protein [Arabidopsis thaliana]
          Length = 834

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 10/229 (4%)

Query: 9   QINPYTFSKMTELRLLKF--CGSKNKCMV---HSLEGVPFTELRYFEWHQFPLKTL-NIL 62
           +++P  F KM  LRLLKF    S N+C +   H L+ +P  EL    W  +PL  L    
Sbjct: 561 ELSPTVFGKMYNLRLLKFYCSTSGNQCKLTLPHGLDTLP-DELSLLHWENYPLVYLPQKF 619

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           +  NLV L MP S + +LW+  +NL  LK I L +S+ LT +  LS A NLE +DL  C+
Sbjct: 620 NPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCT 679

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           SL +   SI    KL  L++  C  L SLP+ +    LK L L GCS  +++        
Sbjct: 680 SLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPN-- 737

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI-FKLQFL 230
              + L G  I ELP SI+ L+ +  L + +C+RL+ +  +  +KL+F 
Sbjct: 738 LEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPRTCNWKLKFF 786



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIR 320
           L +K C R  SLPS       LT+L++++   C  FE + D   NL+    + + GT+IR
Sbjct: 697 LNMKDCSRLRSLPS----MVDLTTLKLLNLSGCSEFEDIQDFAPNLE---EIYLAGTSIR 749

Query: 321 ELPEGLGQLALLSKLELKNCSELE 344
           ELP  +  L  L  L+L+NC  L+
Sbjct: 750 ELPLSIRNLTELVTLDLENCERLQ 773



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 22/160 (13%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPFCN 377
           + +L EG   L  L  ++L +  EL  I   + +  ++E I++  C++L      IP C 
Sbjct: 634 MEKLWEGKKNLEKLKNIKLSHSRELTDILM-LSEALNLEHIDLEGCTSLIDVSMSIPCCG 692

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLE 434
                  ++ S  L +  CS+L SLPS +     LT+L++++   C + E + D   NLE
Sbjct: 693 -------KLVS--LNMKDCSRLRSLPSMV----DLTTLKLLNLSGCSEFEDIQDFAPNLE 739

Query: 435 ALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
              E+ + GT IRE+P S+  L  L  L L+ C   + +P
Sbjct: 740 ---EIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMP 776



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 9/143 (6%)

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEAL--EELRVEG-TGIREVPKSLAQLA-LSKLKLKK 465
           K+L  L+ I       L D L   EAL  E + +EG T + +V  S+     L  L +K 
Sbjct: 642 KNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCTSLIDVSMSIPCCGKLVSLNMKD 701

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           CS   SLPS + ++ +L  L +  C  F  + D   NLE +    + GT+IRE+P S+  
Sbjct: 702 CSRLRSLPSMVDLT-TLKLLNLSGCSEFEDIQDFAPNLEEI---YLAGTSIRELPLSIRN 757

Query: 526 LSSLEWLVLSD-NNLQIIPESLN 547
           L+ L  L L +   LQ +P + N
Sbjct: 758 LTELVTLDLENCERLQEMPRTCN 780


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 186/394 (47%), Gaps = 41/394 (10%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVH---SLEGVPFTELRYFEWHQFPLKTL-NIL 62
           E + +   FS  T+++LL    S N+  VH    L  +P + L+   W   PLKTL    
Sbjct: 548 EARWSTEAFSMATQIKLL----SLNE--VHLPLGLSCLP-SSLKVLRWRGCPLKTLAQTN 600

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + +V +K+  S++  LW  +  + +LK ++LK+SK L +LPD     NLE L L  C+
Sbjct: 601 QLDEVVDIKLSHSQLELLWQGINFMENLKYLNLKFSKNLKRLPDFYGVPNLEKLILKGCA 660

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMT-SCH 181
           SLTE H S+ + NK+ +++L+ CKSL +LP  +    LK L+L GC   K LP+   S  
Sbjct: 661 SLTEVHPSLVHHNKVVLVNLEDCKSLEALPEKLEMSSLKELILSGCCEFKFLPEFGESME 720

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
             S L L G  +  L SS+  L  + +L +  CK L  +  +I  L  L  + I  C  L
Sbjct: 721 NLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGCSKL 780

Query: 242 QFLEMPSCNI-DGTRS----KEQPSSELKLKKCPR-PESLPS---GQC---MFKSLTSLE 289
                  C + DG +     +E  +++  + +  R P+SL       C   + KS+    
Sbjct: 781 -------CRLPDGLKEIKCLEELHANDTSIDELYRLPDSLKVLSFAGCKGTLAKSMNRFI 833

Query: 290 IID-------CPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLALLSKLELKNC 340
             +        P   R P    NL +L  + +    + E  +P    QL  L  L+L   
Sbjct: 834 PFNRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFLQLTSLVSLDLTG- 892

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           +    I SSI +L  +E + ++ C  L+  PE+P
Sbjct: 893 NNFVTIPSSISELSKLELLTLNCCEKLQLLPELP 926



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 198/455 (43%), Gaps = 61/455 (13%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLAL 331
            E L  G    ++L  L +    N +RLPD  G +  L +LI+ G A + E+   L     
Sbjct: 616  ELLWQGINFMENLKYLNLKFSKNLKRLPDFYG-VPNLEKLILKGCASLTEVHPSLVHHNK 674

Query: 332  LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIE 384
            +  + L++C  LE +   + ++ S++ + +S C   K  PE       +    + G+ + 
Sbjct: 675  VVLVNLEDCKSLEALPEKL-EMSSLKELILSGCCEFKFLPEFGESMENLSILALQGTALR 733

Query: 385  RIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
             + SS+        L L  C  L  LP ++    SL  L+I  C KL RLPD L  ++ L
Sbjct: 734  NLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGCSKLCRLPDGLKEIKCL 793

Query: 437  EELRVEGTGIRE---VPKSLAQLALSKLKLKKCSSFES-LP-SRLYVSKSLTSLEIIDCK 491
            EEL    T I E   +P SL  L+ +  K     S    +P +R+  S+   +       
Sbjct: 794  EELHANDTSIDELYRLPDSLKVLSFAGCKGTLAKSMNRFIPFNRMRASQPAPT------- 846

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
               R P    NL  LK + +    + E  +P    QL+SL  L L+ NN   IP S+++L
Sbjct: 847  -GFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFLQLTSLVSLDLTGNNFVTIPSSISEL 905

Query: 550  SSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRL 608
            S L  L L+    L+ +PE L P  S+  LD    +    P++  + P S+ +    L L
Sbjct: 906  SKLELLTLNCCEKLQLLPE-LPP--SIMQLDASNCDSLETPKFDPAKPCSLFASPIQLSL 962

Query: 609  SVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTI 666
                       P E          K  + G    T    M  PG+EIP WF  Q + S  
Sbjct: 963  -----------PREF---------KSFMEGRCLPTTRFDMLIPGDEIPSWFVPQRSVSWE 1002

Query: 667  SLKTPQPTGYNKLMGFAFC-VVVACSV-SECCRHE 699
             +  P     ++ +GFA C ++V+ +V  E C HE
Sbjct: 1003 KVHIPNNFPQDEWVGFALCFLLVSYAVPPELCNHE 1037


>gi|240256009|ref|NP_193685.6| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
            protein [Arabidopsis thaliana]
 gi|332658790|gb|AEE84190.1| P-loop NTPase and Toll/interleukin-1 receptor (TIR) homology domain
            protein [Arabidopsis thaliana]
          Length = 1309

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 117/220 (53%), Gaps = 9/220 (4%)

Query: 9    QINPYTFSKMTELRLLKF--CGSKNKC---MVHSLEGVPFTELRYFEWHQFPLKTL-NIL 62
            +++P  F KM  LRLLKF    S N+C   + H L+ +P  EL    W  +PL  L    
Sbjct: 1084 ELSPTVFGKMYNLRLLKFYCSTSGNQCKLTLPHGLDTLP-DELSLLHWENYPLVYLPQKF 1142

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
            +  NLV L MP S + +LW+  +NL  LK I L +S+ LT +  LS A NLE +DL  C+
Sbjct: 1143 NPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCT 1202

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
            SL +   SI    KL  L++  C  L SLP+ +    LK L L GCS  +++        
Sbjct: 1203 SLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPN-- 1260

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
               + L G  I ELP SI+ L+ +  L + +C+RL+ + S
Sbjct: 1261 LEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1300



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPFCN 377
            + +L EG   L  L  ++L +  EL  I   + +  ++E I++  C++L      IP C 
Sbjct: 1157 MEKLWEGKKNLEKLKNIKLSHSRELTDILM-LSEALNLEHIDLEGCTSLIDVSMSIPCCG 1215

Query: 378  IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLE 434
                   ++ S  L +  CS+L SLPS +     LT+L++++   C + E + D   NLE
Sbjct: 1216 -------KLVS--LNMKDCSRLRSLPSMV----DLTTLKLLNLSGCSEFEDIQDFAPNLE 1262

Query: 435  ALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
               E+ + GT IRE+P S+  L  L  L L+ C   + +PS
Sbjct: 1263 ---EIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1300



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIR 320
            L +K C R  SLPS       LT+L++++   C  FE + D   NL+    + + GT+IR
Sbjct: 1220 LNMKDCSRLRSLPS----MVDLTTLKLLNLSGCSEFEDIQDFAPNLE---EIYLAGTSIR 1272

Query: 321  ELPEGLGQLALLSKLELKNCSELEYISS 348
            ELP  +  L  L  L+L+NC  L+ + S
Sbjct: 1273 ELPLSIRNLTELVTLDLENCERLQEMPS 1300


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 31/323 (9%)

Query: 285  LTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
            +T LE++D  N     +P+ +G LQ L RL  DG  +  LP+ +G L  L  L + + ++
Sbjct: 946  ITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQKLIHLYIYD-NQ 1004

Query: 343  LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKC----- 396
            L  + S +  L ++E + + N + L  FP          G+E++     L +N       
Sbjct: 1005 LTEVPSGVCSLPNLEVLNVYN-NKLSTFP---------PGVEKLQKLGTLYINGVCLLPN 1054

Query: 397  --------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                    +KL + P  +   + L  L I D  +L  +P  + +L  LE L V    IR 
Sbjct: 1055 LEVLSVGNNKLSTFPPGVEKLQKLRELYIRD-NQLTEVPSGVCSLPNLEVLSVGKNPIRR 1113

Query: 449  VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
            +P  + +LA L  L +  C  F   P ++   K +  L    CK F  +PDE+G+L++L+
Sbjct: 1114 LPDYVTRLARLKTLSVSNCQ-FAEFPRQVQQLKIMEELYAGGCK-FDIVPDEVGSLQHLQ 1171

Query: 508  VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            VL +    ++ +P ++  L +L  + L DN     PE L +L ++  L +S NN+ R+P 
Sbjct: 1172 VLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPT 1231

Query: 568  RLDPLSSLKYLDLFENNLDRIPE 590
             L     LK+LD+  N L   P+
Sbjct: 1232 ALHRADKLKHLDVSGNPLTYPPQ 1254



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 209/498 (41%), Gaps = 86/498 (17%)

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSN 170
           +LE LD+   + LT    ++  L KL  LD D   +LTSLP +I S + L  L +   + 
Sbjct: 37  DLEFLDVS-NNKLTSIPEAVGRLQKLYRLDAD-YNTLTSLPQAIGSLQKLTHLYIYD-NK 93

Query: 171 LKNLPKMTSCHLRSTLPLLGVG-IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           L  LP       + T   +G   +   PS +  L N+ E+L  S  +L N    + KLQ 
Sbjct: 94  LSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNL-EVLEVSYNKLPNFPPVVEKLQK 152

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L ++ I                +G +  E                +P G C+   L +LE
Sbjct: 153 LRTLYI----------------NGNQLTE----------------VPPGVCL---LPNLE 177

Query: 290 IIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           ++   N      P  +  LQ L  L I G  + E+P G+  L  L  L + N + L    
Sbjct: 178 VLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYN-NNLSTFP 236

Query: 348 SSIFKLKSVESIEISNCS------NLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
             + KL+ +  + I           +   P I + ++  + +   P    KL K      
Sbjct: 237 PGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYI 296

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKS 452
             ++L  +PS +C   SL +LE++   K  +  LPD +  L  L+ L V    + E P+ 
Sbjct: 297 NDNQLTEVPSGVC---SLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQ 353

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           + QL                       K+L  L    CK F  +PDE+G+L++L  L + 
Sbjct: 354 VLQL-----------------------KTLEELYAGGCK-FDIVPDEVGSLQHLWYLALD 389

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
              ++ +P ++  L +L  + L DN     PE L +L ++  L +S NN+ R+P  L   
Sbjct: 390 KNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTALHRA 449

Query: 573 SSLKYLDLFENNLDRIPE 590
             LK+LD+  N L   P+
Sbjct: 450 DKLKHLDVSGNPLTYPPQ 467



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 47/326 (14%)

Query: 285 LTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           +T LE +D  N     +P+ +G LQ L RL  D   +  LP+ +G L  L+ L + + ++
Sbjct: 35  ITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLPQAIGSLQKLTHLYIYD-NK 93

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNK 395
           L  +   + KL+ +  + I N + L GFP        +    +  + +   P  V KL K
Sbjct: 94  LSTLPPGVEKLQKLTKLFIGN-NQLTGFPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQK 152

Query: 396 C-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
                   ++L  +P  +C+  +L  L + +  KL   P  +  L+ L EL + G  + E
Sbjct: 153 LRTLYINGNQLTEVPPGVCLLPNLEVLSVSN-NKLSTFPPGVEKLQKLRELYIYGNQLTE 211

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC--KNFMRLPDEIGNLEYL 506
           VP  +                           SL +LE++     N    P  +  L+ L
Sbjct: 212 VPSGVC--------------------------SLPNLEVLSVYNNNLSTFPPGVEKLQKL 245

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           + L I G  + EVP  +  L ++EWL +S+NNL   P    +L  L  L +++N L  +P
Sbjct: 246 RELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEVP 305

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYL 592
             +  L +L+ L + +N +  +P+Y+
Sbjct: 306 SGVCSLPNLEVLGVGKNPIRSLPDYV 331



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 157/383 (40%), Gaps = 63/383 (16%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           S+P      + L  L+  D      LP  +G+LQ L  L I    +  LP G+ +L  L+
Sbjct: 50  SIPEAVGRLQKLYRLDA-DYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLT 108

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP--------------------EI 373
           KL + N ++L    S +  L ++E +E+S  + L  FP                    E+
Sbjct: 109 KLFIGN-NQLTGFPSGVCSLPNLEVLEVS-YNKLPNFPPVVEKLQKLRTLYINGNQLTEV 166

Query: 374 P----------FCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLE 416
           P            ++  + +   P  V KL K        ++L  +PS +C   +L  L 
Sbjct: 167 PPGVCLLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLS 226

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS-- 474
           + +   L   P  +  L+ L ELR+ G  + EVP  +  L   +      ++  + P   
Sbjct: 227 VYN-NNLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGG 285

Query: 475 -------RLYVSK-----------SLTSLEIIDC-KNFMR-LPDEIGNLEYLKVLTIKGT 514
                   LY++            SL +LE++   KN +R LPD +  L  LK L++   
Sbjct: 286 EKLQKLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNC 345

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            + E P  + QL +LE L        I+P+ +  L  L  L L  N L+ +P  +  L +
Sbjct: 346 QLDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHN 405

Query: 575 LKYLDLFENNLDRIPEYLRSFPT 597
           L+ + L +N     PE L   P 
Sbjct: 406 LREVYLDDNKFGTFPEVLCELPA 428



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 53/99 (53%)

Query: 491  KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
            +    +P+E+ ++  L+VL +    +  +PE++G+L  L  L    N L  +P+++  L 
Sbjct: 934  QGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQ 993

Query: 551  SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             L+ L + +N L  +P  +  L +L+ L+++ N L   P
Sbjct: 994  KLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFP 1032



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 17/187 (9%)

Query: 421  KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
            + L  +P+E+ ++  LE L V    +  +P+++ +L  L +L     +   SLP  +   
Sbjct: 934  QGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLD-ADGNMLTSLPQAIGSL 992

Query: 480  KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP------ESLGQ-------- 525
            + L  L I D      +P  + +L  L+VL +    +   P      + LG         
Sbjct: 993  QKLIHLYIYD-NQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYINGVCL 1051

Query: 526  LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
            L +LE L + +N L   P  + +L  L  L + +N L  +P  +  L +L+ L + +N +
Sbjct: 1052 LPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPI 1111

Query: 586  DRIPEYL 592
             R+P+Y+
Sbjct: 1112 RRLPDYV 1118



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%)

Query: 509  LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
            L +    +  +PE +  ++ LE L +S+N L  IPE++ +L  L  L    N L  +P+ 
Sbjct: 929  LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQA 988

Query: 569  LDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            +  L  L +L +++N L  +P  + S P
Sbjct: 989  IGSLQKLIHLYIYDNQLTEVPSGVCSLP 1016



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 44/81 (54%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L +    +  +PE +  ++ LE+L +S+N L  IPE++ +L  L  L    N L  +P+ 
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLPQA 77

Query: 569 LDPLSSLKYLDLFENNLDRIP 589
           +  L  L +L +++N L  +P
Sbjct: 78  IGSLQKLTHLYIYDNKLSTLP 98



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 152/354 (42%), Gaps = 77/354 (21%)

Query: 66   NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
            +L  L +  +K+T + + +  L  L R+D     +LT LP  +   Q L  L + Y + L
Sbjct: 948  DLEVLDVSNNKLTSIPEAIGRLQKLYRLDAD-GNMLTSLPQAIGSLQKLIHLYI-YDNQL 1005

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR 183
            TE  S +  L  LEVL++   K L++ P  +   + L  L + G   L NL  ++  + +
Sbjct: 1006 TEVPSGVCSLPNLEVLNVYNNK-LSTFPPGVEKLQKLGTLYINGVCLLPNLEVLSVGNNK 1064

Query: 184  -STLPLLGVGIE----------------ELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
             ST P    G+E                E+PS +  L N+ E+L      +  +   + +
Sbjct: 1065 LSTFP---PGVEKLQKLRELYIRDNQLTEVPSGVCSLPNL-EVLSVGKNPIRRLPDYVTR 1120

Query: 227  LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
            L  L+++ +  C   QF E P       R  +Q    LK+      E L +G C      
Sbjct: 1121 LARLKTLSVSNC---QFAEFP-------RQVQQ----LKIM-----EELYAGGC------ 1155

Query: 287  SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
                     F+ +PDE+G+LQ L  L +D   ++ LP  +  L  L ++ L + ++    
Sbjct: 1156 --------KFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDD-NKFGTF 1206

Query: 347  SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
               + +L ++E ++IS                  + I R+P+++ + +K   L+
Sbjct: 1207 PEVLCELPAMEKLDISK-----------------NNITRLPTALHRADKLKHLD 1243



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%)

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
           +    +P+E+ ++  L+ L +    +  +PE++G+L  L  L    N L  +P+++  L 
Sbjct: 23  QGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLPQAIGSLQ 82

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            L  L + +N L  +P  ++ L  L  L +  N L   P  + S P
Sbjct: 83  KLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLP 128


>gi|224102677|ref|XP_002334150.1| predicted protein [Populus trichocarpa]
 gi|222869839|gb|EEF06970.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 183/394 (46%), Gaps = 65/394 (16%)

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           +N C  LES+PSS+C  KSL  L++  C +L+ +P  LG +++LEE  V GT IR++P S
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           L    L  LK+     F+    RL V  SL+ L    C               L+VL ++
Sbjct: 61  L--FLLKNLKVLSLDGFK----RLAVLPSLSGL----CS--------------LEVLGLR 96

Query: 513 GTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERL 569
              +RE  +PE +G LSSL  L LS NN   +P S+N L  L  L L +   LE +PE  
Sbjct: 97  ACNLREGALPEDIGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVP 156

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
             + ++ YL+    +L  IP+ ++   + I SEF  L       NC +L  +   + +  
Sbjct: 157 SKVQTV-YLNGCI-SLKTIPDPIKLSSSKI-SEFICL-------NCWELYNHNGQDSMGL 206

Query: 630 GWMKQSVNGETYITK--SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
             +++ + G +       +  PGNEIP WF HQ  GS+IS++ P        MGF  CV 
Sbjct: 207 TMLERYLKGLSNPRPGFGIAVPGNEIPGWFNHQRKGSSISVQVPSCG-----MGFVACVA 261

Query: 688 VACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE--SDHVFLGSS 745
            +             +    +LF   C  ++ G ++Y S      + ++  SDH++L   
Sbjct: 262 FS------------ANGESPSLF---CHFKANGRENYPSPMCISCNSIQVLSDHIWLFYL 306

Query: 746 IFAGENSCKRSD----EFFFHIDRSCCEVKKCGI 775
            F      K       E  FH      +VK CG+
Sbjct: 307 SFDHLKEWKHESFSNIELSFHSSEQRVKVKNCGV 340



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
           +  C   ES+PS  C  KSL  L++  C   + +P  LG +++L    + GT+IR+LP  
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG-FPEIPFCNIDGSGIE 384
           L  L  L  L L     L  +  S+  L S+E + +  C+  +G  PE   C    + ++
Sbjct: 61  LFLLKNLKVLSLDGFKRLAVL-PSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLTSLD 119

Query: 385 RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
              ++ +         SLP S+ M   L  L + DC  LE LP+
Sbjct: 120 LSRNNFV---------SLPRSINMLYELEKLVLEDCTMLESLPE 154



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 142 LDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSS 199
           ++ CK+L S+P+SI   K LK+L L GCS L+N+P+ +          + G  I +LP+S
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 200 IKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP---SCNIDGTRS 256
           +  L N+  L +   KRL  +  S+  L  LE + +  C NL+   +P    C    T  
Sbjct: 61  LFLLKNLKVLSLDGFKRLA-VLPSLSGLCSLEVLGLRAC-NLREGALPEDIGCLSSLTSL 118

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
               ++ +         SLP    M   L  L + DC   E LP+    +Q +
Sbjct: 119 DLSRNNFV---------SLPRSINMLYELEKLVLEDCTMLESLPEVPSKVQTV 162



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 35/192 (18%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +E +PSSI CL ++ +L +  C  L+NI  ++ K++ LE                  ++ 
Sbjct: 7   LESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEF----------------DVS 50

Query: 253 GTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFE-RLP 300
           GT  ++ P+S         L L    R   LPS       L SLE++    C   E  LP
Sbjct: 51  GTSIRQLPASLFLLKNLKVLSLDGFKRLAVLPS----LSGLCSLEVLGLRACNLREGALP 106

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           +++G L +L  L +       LP  +  L  L KL L++C+ LE +     K   V+++ 
Sbjct: 107 EDIGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVPSK---VQTVY 163

Query: 361 ISNCSNLKGFPE 372
           ++ C +LK  P+
Sbjct: 164 LNGCISLKTIPD 175


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 164/310 (52%), Gaps = 14/310 (4%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +LP      ++L +L + +   F  LP+E+GNLQ L +L +    +  LP+ +GQL  L 
Sbjct: 156 TLPKEIGNLQNLQTLNL-NSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQ 214

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           KL L N ++L  +S  I  L++++++++   + L   PE      +   ++ + +  L+ 
Sbjct: 215 KLNL-NSNQLTTLSKEIGNLQNLQTLDLGR-NQLTTLPE------EIGNLQNLQTLDLEG 266

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
           N+   L +LP  +   ++L +L++ +  +L  LP+E+GNL+ L+ L +EG  +  +PK +
Sbjct: 267 NQ---LAALPEEIGNLQNLQTLDL-EGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEI 322

Query: 454 AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            +L   K      +   +LP  +   + L  L + D      LP EI +L+ LK+L++  
Sbjct: 323 GKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSL-DHNQLKTLPKEIEDLQNLKILSLGS 381

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             +  +P+ +G+L +L  L L  N L  +P+ + +L +L  L L  N L  +P+ +  L 
Sbjct: 382 NQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQ 441

Query: 574 SLKYLDLFEN 583
           +LK L+L  N
Sbjct: 442 NLKELNLVGN 451



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 82/315 (26%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+GNLQ L  L ++      LPE +G L  L KL+L + ++L  +   I +L++++ 
Sbjct: 157 LPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSH-NQLTTLPKEIGQLQNLQK 215

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + ++                                  ++L +L   +   ++L +L++ 
Sbjct: 216 LNLN---------------------------------SNQLTTLSKEIGNLQNLQTLDL- 241

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
              +L  LP+E+GNL+ L+ L +EG  +  +P+ +  L                      
Sbjct: 242 GRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNL---------------------- 279

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI----REV--------------- 519
            ++L +L++ +      LP+EIGNL+ L+ L ++G  +    +E+               
Sbjct: 280 -QNLQTLDL-EGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNR 337

Query: 520 ----PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
               P+ +G+L  L+WL L  N L+ +P+ +  L +L  L L +N L  +P+ +  L +L
Sbjct: 338 LTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNL 397

Query: 576 KYLDLFENNLDRIPE 590
             LDL  N L  +P+
Sbjct: 398 IMLDLHGNQLTTLPK 412



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 20/235 (8%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           ++L +LP  +   ++L +L + +  +   LP+E+GNL+ L++L +    +  +PK + QL
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNL-NSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQL 210

Query: 457 A-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
             L KL L   +   +L   +   ++L +L++        LP+EIGNL+ L+ L ++G  
Sbjct: 211 QNLQKLNLN-SNQLTTLSKEIGNLQNLQTLDL-GRNQLTTLPEEIGNLQNLQTLDLEGNQ 268

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +  +PE +G L +L+ L L  N L  +PE +  L +L +L L  N L  +P+ +  L  L
Sbjct: 269 LAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKL 328

Query: 576 KYLDLFENNLDRIPEYLRSFPTSIPSEFTSLR----LSVDLRNCLKLDPNELSEI 626
           K L L+ N L           T++P E   L+    LS+D  N LK  P E+ ++
Sbjct: 329 KKLYLYNNRL-----------TTLPKEIGKLQKLQWLSLD-HNQLKTLPKEIEDL 371



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 59/333 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I + +NL +L +  ++ T L +++ NL  L+++DL +++L T   ++   QNL+ L+L  
Sbjct: 161 IGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLN- 219

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            + LT     I  L  L+ LDL R + LT+LP  I              NL+NL      
Sbjct: 220 SNQLTTLSKEIGNLQNLQTLDLGRNQ-LTTLPEEI-------------GNLQNL------ 259

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
               TL L G  +  LP  I  L N+ + L     +L  +   I  LQ L+++ +     
Sbjct: 260 ---QTLDLEGNQLAALPEEIGNLQNL-QTLDLEGNQLATLPEEIGNLQNLQTLDLEGN-- 313

Query: 241 LQFLEMPS----------CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
            Q   +P             +   R    P    KL+K    + L       K+L   EI
Sbjct: 314 -QLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKL---QWLSLDHNQLKTLPK-EI 368

Query: 291 IDCPNFE----------RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
            D  N +           LP E+G LQ L  L + G  +  LP+ +G+L  L  L+L + 
Sbjct: 369 EDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDL-HG 427

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           ++L  +   I KL++++ +      NL G P +
Sbjct: 428 NQLMTLPKEIGKLQNLKEL------NLVGNPSL 454



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 16/126 (12%)

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
           G  +  +P+ +G L +L+ L L+ N    +PE +  L  L  L LS+N L  +P+ +  L
Sbjct: 151 GNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQL 210

Query: 573 SSLKYLDLFENNLDRIPEYL------------RSFPTSIPSEFTSLRLSVDLRNCLKLDP 620
            +L+ L+L  N L  + + +            R+  T++P E  +L+   +L+  L L+ 
Sbjct: 211 QNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQ---NLQ-TLDLEG 266

Query: 621 NELSEI 626
           N+L+ +
Sbjct: 267 NQLAAL 272



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL-- 118
           I + +NL +L + G+++  L +++ NL +L+ +DL+ ++L T   ++   QNL+ LDL  
Sbjct: 253 IGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEG 312

Query: 119 --------------------GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSK 158
                                Y + LT     I  L KL+ L LD  + L +LP  I   
Sbjct: 313 NQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQ-LKTLPKEIEDL 371

Query: 159 YLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
              +++  G + L  LPK +        L L G  +  LP  I  L N+ ++L     +L
Sbjct: 372 QNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNL-KMLDLHGNQL 430

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQ 242
             +   I KLQ L+ + +   P+L+
Sbjct: 431 MTLPKEIGKLQNLKELNLVGNPSLR 455


>gi|4582487|emb|CAA16927.2| resistence protein-like [Arabidopsis thaliana]
 gi|7268746|emb|CAB78952.1| resistence protein-like [Arabidopsis thaliana]
          Length = 1239

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 117/220 (53%), Gaps = 9/220 (4%)

Query: 9    QINPYTFSKMTELRLLKF--CGSKNKCMV---HSLEGVPFTELRYFEWHQFPLKTL-NIL 62
            +++P  F KM  LRLLKF    S N+C +   H L+ +P  EL    W  +PL  L    
Sbjct: 1014 ELSPTVFGKMYNLRLLKFYCSTSGNQCKLTLPHGLDTLP-DELSLLHWENYPLVYLPQKF 1072

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
            +  NLV L MP S + +LW+  +NL  LK I L +S+ LT +  LS A NLE +DL  C+
Sbjct: 1073 NPVNLVELNMPYSNMEKLWEGKKNLEKLKNIKLSHSRELTDILMLSEALNLEHIDLEGCT 1132

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
            SL +   SI    KL  L++  C  L SLP+ +    LK L L GCS  +++        
Sbjct: 1133 SLIDVSMSIPCCGKLVSLNMKDCSRLRSLPSMVDLTTLKLLNLSGCSEFEDIQDFAPN-- 1190

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
               + L G  I ELP SI+ L+ +  L + +C+RL+ + S
Sbjct: 1191 LEEIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1230



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)

Query: 319  IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPFCN 377
            + +L EG   L  L  ++L +  EL  I   + +  ++E I++  C++L      IP C 
Sbjct: 1087 MEKLWEGKKNLEKLKNIKLSHSRELTDILM-LSEALNLEHIDLEGCTSLIDVSMSIPCCG 1145

Query: 378  IDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLE 434
                   ++ S  L +  CS+L SLPS +     LT+L++++   C + E + D   NLE
Sbjct: 1146 -------KLVS--LNMKDCSRLRSLPSMV----DLTTLKLLNLSGCSEFEDIQDFAPNLE 1192

Query: 435  ALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
               E+ + GT IRE+P S+  L  L  L L+ C   + +PS
Sbjct: 1193 ---EIYLAGTSIRELPLSIRNLTELVTLDLENCERLQEMPS 1230



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIID---CPNFERLPDELGNLQALNRLIIDGTAIR 320
            L +K C R  SLPS       LT+L++++   C  FE + D   NL+    + + GT+IR
Sbjct: 1150 LNMKDCSRLRSLPS----MVDLTTLKLLNLSGCSEFEDIQDFAPNLE---EIYLAGTSIR 1202

Query: 321  ELPEGLGQLALLSKLELKNCSELEYISS 348
            ELP  +  L  L  L+L+NC  L+ + S
Sbjct: 1203 ELPLSIRNLTELVTLDLENCERLQEMPS 1230


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 162/326 (49%), Gaps = 18/326 (5%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L  L +    +  LP+ +G+L  L KL L   + L  +   I KL++++ 
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTR-NRLANLPEEIGKLQNLQE 185

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF-- 409
           +++   + L   PE       +   +++G+ +  +P  + KL    KL    + L  F  
Sbjct: 186 LDLE-GNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPK 244

Query: 410 --KSLTSLEIIDC--KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLK 464
             + L +L+I+     +L  LP E+G L+ L+E++     +  +PK +  L  L +L L 
Sbjct: 245 EIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLA 304

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
             +   +LP  +   ++L  L +   +    LP EIGNL+ L+ L +    +   P+ +G
Sbjct: 305 H-NQLTALPKEIGNLQNLQQLYLYGNQ-LTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIG 362

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENN 584
            L  L+WL L+ N L  IP+ +  L +L  L LS+N L  IP+ ++ L +L+ LDL  N 
Sbjct: 363 NLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQ 422

Query: 585 LDRIPEYLRSFPTSIPSEFTSLRLSV 610
           L  +P+ + +       + TS RL+ 
Sbjct: 423 LTALPKEIGNLQNLKELDLTSNRLTT 448



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 35/332 (10%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E+G LQ L  L ++G  +  LPE +G L  L  L+L+  ++L  +   I KL++++ 
Sbjct: 173 LPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLE-GNQLTTLPKEIGKLQNLKK 231

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLES-------LPS 404
           + + N + L  FP+       +   ++  + +  +P  V KL    +++S       LP 
Sbjct: 232 LYLYN-NRLTTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPK 290

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   ++L  L  +   +L  LP E+GNL+ L++L + G  +  +P  +  L  L  L L
Sbjct: 291 EIGNLQNLQEL-YLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHL 349

Query: 464 --KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
              K ++F      L   K L     ++      +P EIGNL+ LK L +    +  +P+
Sbjct: 350 GNNKLTAFPKEIGNLQKLKWLG----LNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPK 405

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            +  L +L+ L L++N L  +P+ +  L +L  L L++N L  +P+ +  L SL+ LDL 
Sbjct: 406 EIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLS 465

Query: 582 ENNLDRIPE-----------YLRSFPTSIPSE 602
            N L   PE            L + PT +P +
Sbjct: 466 NNPLTSFPEEIGKLQHLKRLRLENIPTLLPQK 497



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 192/456 (42%), Gaps = 92/456 (20%)

Query: 55  PLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           PL TL   I   +NL  L +  +++  L  ++  L  L++++L  ++L     ++   QN
Sbjct: 123 PLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQN 182

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L+ LDL   + L      I  L  L+ LDL+    LT+LP  I               L+
Sbjct: 183 LQELDL-EGNQLATLPEEIGNLQNLQTLDLE-GNQLTTLPKEI-------------GKLQ 227

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
           NL K+   + R T           P  I+ L N+ ++L     +L  +   + KLQ L+ 
Sbjct: 228 NLKKLYLYNNRLT---------TFPKEIEDLQNL-KILSLGNNQLTTLPKEVGKLQNLQE 277

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           ++                     SK Q +            +LP      ++L  L +  
Sbjct: 278 MK--------------------SSKNQLT------------TLPKEIGNLQNLQELYLAH 305

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL------------ELKNC 340
                 LP E+GNLQ L +L + G  +  LP  +G L  L  L            E+ N 
Sbjct: 306 N-QLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNL 364

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS--------SVLK 392
            +L+++  +  +L ++   EI N  NLK        N+  + +  IP          VL 
Sbjct: 365 QKLKWLGLNKNQLTTIPK-EIGNLQNLKEL------NLSSNQLTTIPKEIENLQNLQVLD 417

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           LN  ++L +LP  +   ++L  L++    +L  LP E+GNL++LE L +    +   P+ 
Sbjct: 418 LNN-NQLTALPKEIGNLQNLKELDLT-SNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEE 475

Query: 453 LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           + +L  L +L+L+   +   LP +  + K L ++ I
Sbjct: 476 IGKLQHLKRLRLENIPTL--LPQKEKIRKLLPNVTI 509



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 25/194 (12%)

Query: 48  YFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
           Y   +Q     + I + +NL  L +  +K+T    ++ NL  LK + L  ++L T   ++
Sbjct: 325 YLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEI 384

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
              QNL+ L+L   + LT     I+ L  L+VLDL+  + LT+LP  I            
Sbjct: 385 GNLQNLKELNLS-SNQLTTIPKEIENLQNLQVLDLNNNQ-LTALPKEI------------ 430

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
             NL+NL ++     R T          LP  I  L ++ E L  S   L +    I KL
Sbjct: 431 -GNLQNLKELDLTSNRLT---------TLPKEIGNLQSL-ESLDLSNNPLTSFPEEIGKL 479

Query: 228 QFLESIRIHRCPNL 241
           Q L+ +R+   P L
Sbjct: 480 QHLKRLRLENIPTL 493


>gi|297791267|ref|XP_002863518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309353|gb|EFH39777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1150

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 70/373 (18%)

Query: 14  TFSKMTELRLLKFCGS------KNKCMVHSLEGV--PFTELRYFEWHQFPLKTL-NILHW 64
            F+ M  LR LK   S      +  C ++  +G+  P  E+RY EW +FPL  L +    
Sbjct: 549 AFTNMCNLRYLKLYSSTCPLECEGDCKLNFPDGLSFPLKEVRYLEWLKFPLDELPSDFTP 608

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL+ LK+P SK+ Q+W + +    LK +DL  S++L K+   S A NL  L+L  C+SL
Sbjct: 609 KNLIDLKLPYSKIKQVWKESKGTPKLKWVDLNNSRMLQKISGFSKAPNLLRLNLEGCTSL 668

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                 ++ +  L  L+L  C SL  LP  ++   L  L+L GC  L+   ++ S ++ S
Sbjct: 669 DCLSEEMKTMQSLVFLNLRGCTSLRCLP-EMNLSSLTTLILTGCLKLREF-RLISENIES 726

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G  I++LP+ +  L  +  L +  C+RLE I   I KL+ L+ + +  C NL+  
Sbjct: 727 -LYLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECIGKLKALQELILSGCSNLK-- 783

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                                                             +F  L D + 
Sbjct: 784 --------------------------------------------------SFPNLEDTME 793

Query: 305 NLQALNRLIIDGTAIRELPE---GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           N +    L++DGT+I E+P+   G   L+ L +L  +    +  + S I +L  ++ +++
Sbjct: 794 NFRV---LLLDGTSIDEMPKIMSGSNSLSFLRRLSFRRNDVISSLGSDISQLYHLKWLDL 850

Query: 362 SNCSNLKGFPEIP 374
             C  LK    +P
Sbjct: 851 KYCKKLKSLSTLP 863



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 198/487 (40%), Gaps = 100/487 (20%)

Query: 368  KGFPEIPFCNIDGS-------GIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            KG P++ + +++ S       G  + P+ + L L  C+ L+ L   +   +SL  L +  
Sbjct: 629  KGTPKLKWVDLNNSRMLQKISGFSKAPNLLRLNLEGCTSLDCLSEEMKTMQSLVFLNLRG 688

Query: 420  CKKLERLPD-ELGNL------------------EALEELRVEGTGIREVPKSLAQLA-LS 459
            C  L  LP+  L +L                  E +E L ++GT I+++P  + +L  L 
Sbjct: 689  CTSLRCLPEMNLSSLTTLILTGCLKLREFRLISENIESLYLDGTAIKDLPTDMVKLQRLI 748

Query: 460  KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
             L LK+C   E +P  +   K+L  L +  C N    P+    +E  +VL + GT+I E+
Sbjct: 749  LLNLKECRRLEIIPECIGKLKALQELILSGCSNLKSFPNLEDTMENFRVLLLDGTSIDEM 808

Query: 520  PESLGQLSSLEWL-VLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
            P+ +   +SL +L  LS     +I    + +S L  LK  +         L     LK L
Sbjct: 809  PKIMSGSNSLSFLRRLSFRRNDVISSLGSDISQLYHLKWLD---------LKYCKKLKSL 859

Query: 579  DLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVD------LRNCLKLDPNELSEII----- 627
                 N+  +  +      ++ S    L  + D        NC KL+    ++I      
Sbjct: 860  STLPPNIQCLDAHGCISLQTVTSPLAFLMPTEDTHSMFIFTNCCKLNEAAKNDIASHILR 919

Query: 628  KDGWMKQSVNGETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
            K   +    + E+++ +++    +PG E+P WF HQ+  S +  K P     NK +G A 
Sbjct: 920  KCRLISDDHHNESFVFRALIGTCYPGYEVPPWFSHQAFSSVLEPKLPPHWCDNKFLGLAL 979

Query: 685  CVVVACS----------VSECCRHESVEDDRKCNLFDV-VCDRRSEGYDSYTSSYLGKIS 733
            C +V+            V   C  E++  D  C+ F V V      G +  T        
Sbjct: 980  CAIVSFHDYRDQNNRLLVKCTCEFENL--DASCSQFSVPVGGWFEPGNEPRT-------- 1029

Query: 734  HVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSC---------------------CEVKK 772
             VESDHVF+G    +  N  KR +E +    R C                     C+V K
Sbjct: 1030 -VESDHVFIG--YISWLNIKKRQEEQY---KRGCVPTKASLTFSVTDGTGQVIAQCKVVK 1083

Query: 773  CGIHFVH 779
            CG   V+
Sbjct: 1084 CGFGLVY 1090



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 27/223 (12%)

Query: 237 RCPNLQFLEMPSCNIDGTRSKEQPSSE----LKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           + PNL  L +  C      S+E  + +    L L+ C     LP  +    SLT+L +  
Sbjct: 653 KAPNLLRLNLEGCTSLDCLSEEMKTMQSLVFLNLRGCTSLRCLP--EMNLSSLTTLILTG 710

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C           N+++L    +DGTAI++LP  + +L  L  L LK C  LE I   I K
Sbjct: 711 CLKLREFRLISENIESL---YLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECIGK 767

Query: 353 LKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV-----------LKLN 394
           LK+++ + +S CSNLK FP +           +DG+ I+ +P  +           L   
Sbjct: 768 LKALQELILSGCSNLKSFPNLEDTMENFRVLLLDGTSIDEMPKIMSGSNSLSFLRRLSFR 827

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
           +   + SL S +     L  L++  CKKL+ L     N++ L+
Sbjct: 828 RNDVISSLGSDISQLYHLKWLDLKYCKKLKSLSTLPPNIQCLD 870


>gi|297805564|ref|XP_002870666.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316502|gb|EFH46925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 133/259 (51%), Gaps = 16/259 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           MSKI  E  I+   F +M  L+ LKF    N  ++  ++ +P   LR   W  +P K+L 
Sbjct: 530 MSKI-GEFSISKRAFERMCNLKFLKFYNG-NVSLLEDMKYLP--RLRLLHWDSYPRKSLP 585

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L M  SK+  LW  +Q L +LK+IDL YS  L ++P+LS A NLE L L 
Sbjct: 586 LTFQPECLVELHMRYSKLEMLWGGIQPLANLKKIDLGYSFNLKEIPNLSKATNLETLKLI 645

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL    SSI+ L+KLE+LD   C  L  +PT+I    L+ + +  CS L++ P ++ 
Sbjct: 646 GCESLVVLPSSIRNLHKLEMLDASGCSKLQVIPTNIDLASLEEVKMDNCSRLRSFPDISR 705

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLS---NIGELLIYSCKRLENISSSIFKLQFLES---- 232
                 L + G  I+E P+SI       +I ++   S KRL ++  S+  L    S    
Sbjct: 706 N--IEYLSVAGTKIKEFPASIVGYWSRLDILQIGSRSLKRLTHVPQSVKSLDLSNSDIKM 763

Query: 233 --IRIHRCPNLQFLEMPSC 249
               +   P+L +L + +C
Sbjct: 764 IPDYVIGLPHLGYLNVDNC 782



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 86/299 (28%)

Query: 434 EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           E L EL +  + +  +   +  LA L K+ L    + + +P+ L  + +L +L++I C++
Sbjct: 591 ECLVELHMRYSKLEMLWGGIQPLANLKKIDLGYSFNLKEIPN-LSKATNLETLKLIGCES 649

Query: 493 FMRLPDEIGNLEYLKV-------------------------------------------- 508
            + LP  I NL  L++                                            
Sbjct: 650 LVVLPSSIRNLHKLEMLDASGCSKLQVIPTNIDLASLEEVKMDNCSRLRSFPDISRNIEY 709

Query: 509 LTIKGTAIREVPESL-GQLSSLEWLVLSDNNLQIIPESLNQLS----SLVSLKLSNNNLE 563
           L++ GT I+E P S+ G  S L+        LQI   SL +L+    S+ SL LSN++++
Sbjct: 710 LSVAGTKIKEFPASIVGYWSRLDI-------LQIGSRSLKRLTHVPQSVKSLDLSNSDIK 762

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT-------------SIPSEFTSLRLSV 610
            IP+ +  L  L YL++  +N  ++      FP+             S+   F     ++
Sbjct: 763 MIPDYVIGLPHLGYLNV--DNCRKLVSIQGHFPSLASLSAEHCISLKSVCCSFHRPISNL 820

Query: 611 DLRNCLKLDPNELSEIIK-DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
              NCLKLD      I++  G+            KS+  PG EIP  F HQ+ G++I++
Sbjct: 821 MFHNCLKLDNASKRGIVQLSGY------------KSICLPGKEIPAEFTHQTRGNSITI 867



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 40/193 (20%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++E+P  L +   L  L+L  C  L  + SSI  L  +E ++ S CS L+  P     NI
Sbjct: 627 LKEIPN-LSKATNLETLKLIGCESLVVLPSSIRNLHKLEMLDASGCSKLQVIP----TNI 681

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D + +E +     K++ CS+L S P               D  +             +E 
Sbjct: 682 DLASLEEV-----KMDNCSRLRSFP---------------DISR------------NIEY 709

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           L V GT I+E P S+     S+L + +  S  SL    +V +S+ SL++ +  +   +PD
Sbjct: 710 LSVAGTKIKEFPASIVGY-WSRLDILQIGS-RSLKRLTHVPQSVKSLDLSN-SDIKMIPD 766

Query: 499 EIGNLEYLKVLTI 511
            +  L +L  L +
Sbjct: 767 YVIGLPHLGYLNV 779



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 29/215 (13%)

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLE 218
           LK++ L    NLK +P ++      TL L+G   +  LPSSI+ L  +  L    C +L+
Sbjct: 616 LKKIDLGYSFNLKEIPNLSKATNLETLKLIGCESLVVLPSSIRNLHKLEMLDASGCSKLQ 675

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID-----GTRSKEQPSSELKLKKCPRPE 273
            I ++I  L  LE +++  C  L+     S NI+     GT+ KE P+S +      R +
Sbjct: 676 VIPTNI-DLASLEEVKMDNCSRLRSFPDISRNIEYLSVAGTKIKEFPASIVGY--WSRLD 732

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
            L  G    K LT +                  Q++  L +  + I+ +P+ +  L  L 
Sbjct: 733 ILQIGSRSLKRLTHVP-----------------QSVKSLDLSNSDIKMIPDYVIGLPHLG 775

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
            L + NC +L  I        S+ S+   +C +LK
Sbjct: 776 YLNVDNCRKLVSIQG---HFPSLASLSAEHCISLK 807


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 150/327 (45%), Gaps = 75/327 (22%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C  L+SLPSS+C FKSLT+L    C +LE  P+ L ++E L++L + G+ I+E+P S
Sbjct: 1005 LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSS 1064

Query: 453  LAQL-------------------------ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            + +L                         +L  L +K C   + LP  L     L SLEI
Sbjct: 1065 IQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENL---GRLQSLEI 1121

Query: 488  IDCKNF----MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            +  K+F     +LP  +  L  L++L +    +RE+P  +  L+SL+ LVL  N     P
Sbjct: 1122 LYVKDFDSMNCQLP-SLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSKP 1180

Query: 544  ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEF 603
            + ++QL  L+ L LS+  L                      L  IPE   +  T +  + 
Sbjct: 1181 DGISQLHKLIVLNLSHCKL----------------------LQHIPEPPSNLITLVAHQC 1218

Query: 604  TSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNG----ETYITKSMYFPGNEIPKWFRH 659
            TSL++S  L           S   K G +++ V G    +T+I +S     N IP+W  H
Sbjct: 1219 TSLKISSSLL---------WSPFFKSG-IQKFVPGVKLLDTFIPES-----NGIPEWISH 1263

Query: 660  QSTGSTISLKTPQPTGYN-KLMGFAFC 685
            Q  GS I+L  PQ    N   +GFA C
Sbjct: 1264 QKKGSKITLTLPQNWYENDDFLGFALC 1290



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 12/210 (5%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C   +SLPS  C FKSLT+L    C   E  P+ L +++ L +L + G+AI+E+P  
Sbjct: 1005 LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSS 1064

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
            + +L  L  L L  C  L  +  SI  L S++++ I +C  LK  PE          + R
Sbjct: 1065 IQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPE---------NLGR 1115

Query: 386  IPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
            + S  +L +     +     SL    SL  L +I+C  L  +P  + +L +L+ L + G 
Sbjct: 1116 LQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINC-GLREIPSGICHLTSLQCLVLMGN 1174

Query: 445  GIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
                 P  ++QL  L  L L  C   + +P
Sbjct: 1175 QFSSKPDGISQLHKLIVLNLSHCKLLQHIP 1204



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 110/214 (51%), Gaps = 12/214 (5%)

Query: 136  KLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  CK L SLP+SI   K L  L   GCS L++ P+ +    +   L L G  I
Sbjct: 999  ELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAI 1058

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI+ L  + +L +  CK L N+  SI  L  L+++ I  CP L+  ++P  N+  
Sbjct: 1059 KEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELK--KLPE-NLGR 1115

Query: 254  TRSKE-QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             +S E     +     C  P SL SG C   SL  L +I+C     +P  + +L +L  L
Sbjct: 1116 LQSLEILYVKDFDSMNCQLP-SL-SGLC---SLRILRLINC-GLREIPSGICHLTSLQCL 1169

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            ++ G      P+G+ QL  L  L L +C  L++I
Sbjct: 1170 VLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHI 1203



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 100/246 (40%), Gaps = 54/246 (21%)

Query: 9   QINPYTFSKMTELRLLKF-------CGSKNKCMVHSLEG-------------VPFTELRY 48
           Q    +F +M  LRLLK        C S+       L+G              P  EL Y
Sbjct: 544 QFTKESFKQMDRLRLLKIHKDDEYGCISR---FSRHLDGKLFSEDHLPRDFEFPSYELTY 600

Query: 49  FEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
           F W  + L++L    H ++LV L + GS + QLW   +    L  I+L +S  LT++PD 
Sbjct: 601 FHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDF 660

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLR 166
           S   NLEI                        L L  C  L  LP  I+  K+L+ L   
Sbjct: 661 SSVPNLEI------------------------LTLKGCVKLECLPRGIYKWKHLQTLSCG 696

Query: 167 GCSNLKNLPKMTSCHLRS--TLPLLGVGIEELP--SSIKCLSNIGELLIYSCKRLENISS 222
            CS LK  P++   ++R    L L G  IEELP  SS   L  +  L    C +L  I +
Sbjct: 697 DCSKLKRFPEIKG-NMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPT 755

Query: 223 SIFKLQ 228
               L 
Sbjct: 756 DTLDLH 761



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 442  EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
            E + ++E+P     L L  L L+ C   +SLPS +   KSLT+L    C      P+ + 
Sbjct: 984  EDSDMKELPIIENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEILE 1043

Query: 502  NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL-SN 559
            ++E LK L + G+AI+E+P S+ +L  L+ L L+   NL  +PES+  L+SL +L + S 
Sbjct: 1044 DMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKSC 1103

Query: 560  NNLERIPERLDPLSSLK--YLDLFENNLDRIPEY---------------LRSFPTSIPSE 602
              L+++PE L  L SL+  Y+  F++   ++P                 LR  P+ I   
Sbjct: 1104 PELKKLPENLGRLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINCGLREIPSGI-CH 1162

Query: 603  FTSLRLSVDLRNCLKLDPNELSEIIK 628
             TSL+  V + N     P+ +S++ K
Sbjct: 1163 LTSLQCLVLMGNQFSSKPDGISQLHK 1188



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 89/221 (40%), Gaps = 57/221 (25%)

Query: 147 SLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           SL SLPT+ H+K L  L+LRG SN+K L +    H                         
Sbjct: 607 SLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLH------------------------- 640

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
                    +L  I+ S        S+ +   P+  F  +P+  I            L L
Sbjct: 641 --------NKLNVINLS-------HSVHLTEIPD--FSSVPNLEI------------LTL 671

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP--E 324
           K C + E LP G   +K L +L   DC   +R P+  GN++ L  L + GTAI ELP   
Sbjct: 672 KGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSS 731

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             G L  L  L  + CS+L  I +    L      +++ CS
Sbjct: 732 SFGHLKALKILSFRGCSKLNKIPTDTLDLHGAFVQDLNQCS 772



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 22/167 (13%)

Query: 315 DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL----KSVESIEISNCSNLKGF 370
           DG ++  LP         +    K+  EL    S+I +L    K    + + N S+    
Sbjct: 604 DGYSLESLP---------TNFHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHL 654

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            EIP    D S +  +   +L L  C KLE LP  +  +K L +L   DC KL+R P+  
Sbjct: 655 TEIP----DFSSVPNL--EILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIK 708

Query: 431 GNLEALEELRVEGTGIREVP--KSLAQL-ALSKLKLKKCSSFESLPS 474
           GN+  L EL + GT I E+P   S   L AL  L  + CS    +P+
Sbjct: 709 GNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPT 755



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           + E+P   +   L  L LK C   E LP  +Y  K L +L   DC    R P+  GN+  
Sbjct: 654 LTEIPDFSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRK 713

Query: 506 LKVLTIKGTAIREVP--ESLGQLSSLEWL 532
           L+ L + GTAI E+P   S G L +L+ L
Sbjct: 714 LRELDLSGTAIEELPSSSSFGHLKALKIL 742



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 84   VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
            ++++  LK++DL  S +      +   + L+ L+L YC +L     SI  L  L+ L + 
Sbjct: 1042 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1101

Query: 144  RCKSLTSLP------TSIHSKYLKRLVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEEL 196
             C  L  LP       S+   Y+K      C     LP ++  C LR  L L+  G+ E+
Sbjct: 1102 SCPELKKLPENLGRLQSLEILYVKDFDSMNC----QLPSLSGLCSLR-ILRLINCGLREI 1156

Query: 197  PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            PS I  L+++ + L+    +  +    I +L  L  + +  C  LQ +  P  N+
Sbjct: 1157 PSGICHLTSL-QCLVLMGNQFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNL 1210


>gi|57899196|dbj|BAD87306.1| putative blight resistance protein [Oryza sativa Japonica Group]
          Length = 1213

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 22/318 (6%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LPSSI+ L  +G L + S   + ++  S   LQ ++S+ +  C     LE+   NI    
Sbjct: 606 LPSSIRRLMLLGYLDV-SGFPIISLPKSFHTLQNMQSLILSNCS----LEILPANIGSL- 659

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
              Q    L L +      LPS       L  L +  C   E LP+ + NL+ L  L I 
Sbjct: 660 ---QKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDIS 716

Query: 316 GT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           G  A+++LP   G LA LS + L +CS+L  +  S+  L+S+E + +S+C  L+  PE  
Sbjct: 717 GCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSL-NLESLEHLILSDCHELEQLPE-- 773

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
               D   + R+   VL ++ C +++ LP + C  K L  L + DC  L +LP+  G+L 
Sbjct: 774 ----DLGNLYRL--EVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECFGDLS 827

Query: 435 ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            L+ L +   + ++ +P SL  +  L  L L  C S ESLPS L   + L  L++  C N
Sbjct: 828 ELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLTGCYN 886

Query: 493 FMRLPDEIGNLEYLKVLT 510
              LPD I N+  L +L 
Sbjct: 887 MHGLPDSISNMSSLTLLN 904



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 192/434 (44%), Gaps = 70/434 (16%)

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           P+   LP  +  L  L  L + G  I  LP+    L  +  L L NCS LE + ++I  L
Sbjct: 601 PSNPVLPSSIRRLMLLGYLDVSGFPIISLPKSFHTLQNMQSLILSNCS-LEILPANIGSL 659

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
           + +  +++S  SNL   P         S  + +    L L+ C+KLE LP S+   K L 
Sbjct: 660 QKLCYLDLSRNSNLNKLP--------SSVTDLVELYFLNLSGCAKLEELPESINNLKCLQ 711

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L+I  C  L++LP + G                    SLA+L+   + L  CS    LP
Sbjct: 712 HLDISGCCALQKLPGKFG--------------------SLAKLSF--VNLSSCSKLTKLP 749

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL 532
             L + +SL  L + DC    +LP+++GNL  L+VL +     ++ +P++  QL  L++L
Sbjct: 750 DSLNL-ESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYL 808

Query: 533 VLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            LSD + L  +PE    LS L SL L++ + L+ +P  L  + +LK+L+L          
Sbjct: 809 NLSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNL---------S 859

Query: 591 YLRSFPTSIPSEFTSLRLSV-DLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITKSMY 647
           Y  S   S+PS    LRL V DL  C  +   P+ +S +     +  +   E    K+  
Sbjct: 860 YCVSL-ESLPSSLGDLRLQVLDLTGCYNMHGLPDSISNMSSLTLLNTATGSECVFHKTQI 918

Query: 648 FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSEC----CRH----E 699
                     +H +   T+          +++    F  +V      C     RH    E
Sbjct: 919 IK--------KHLNLPGTVE------HDVHEIENADFSSIVELGRLRCRELEVRHLENVE 964

Query: 700 SVEDDRKCNLFDVV 713
            +ED RK NL D+V
Sbjct: 965 RLEDARKANLRDMV 978



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 173/373 (46%), Gaps = 65/373 (17%)

Query: 103 KLPDLSLAQN--LEILDLGYCSSLTETH-------SSIQYLNKLEVLDLDRCKSLTSLPT 153
           +LP  + +Q   + ILDL   S+  ++        SSI+ L  L  LD+     + SLP 
Sbjct: 573 QLPRKAFSQTSYIRILDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGF-PIISLPK 631

Query: 154 SIHS-KYLKRLVLRGCS------NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           S H+ + ++ L+L  CS      N+ +L K+  C+L  +       + +LPSS+  L  +
Sbjct: 632 SFHTLQNMQSLILSNCSLEILPANIGSLQKL--CYLDLSR---NSNLNKLPSSVTDLVEL 686

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
             L +  C +LE +  SI  L+ L+ + I  C  LQ                        
Sbjct: 687 YFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQ------------------------ 722

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEG 325
                   LP        L+ + +  C    +LPD L NL++L  LI+ D   + +LPE 
Sbjct: 723 -------KLPGKFGSLAKLSFVNLSSCSKLTKLPDSL-NLESLEHLILSDCHELEQLPED 774

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           LG L  L  L++ +C  ++ +  +  +LK ++ + +S+C    G  ++P C  D S ++ 
Sbjct: 775 LGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC---HGLIQLPECFGDLSELQS 831

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
                L L  CSKL+SLP SLC   +L  L +  C  LE LP  LG+L  L+ L + G  
Sbjct: 832 -----LNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLTGCY 885

Query: 445 GIREVPKSLAQLA 457
            +  +P S++ ++
Sbjct: 886 NMHGLPDSISNMS 898



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 32/280 (11%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S + +L   V +LV L  ++L     L +LP+ ++  + L+ LD+  C +L +       
Sbjct: 671 SNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPGKFGS 730

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
           L KL  ++L  C  LT LP S++ + L+ L+L  C  L                      
Sbjct: 731 LAKLSFVNLSSCSKLTKLPDSLNLESLEHLILSDCHEL---------------------- 768

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
           E+LP  +  L  +  L +  C R++ +  +  +L+ L+ + +  C  L  +++P C   G
Sbjct: 769 EQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGL--IQLPECF--G 824

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
             S+ Q    L L  C + +SLP   C   +L  L +  C + E LP  LG+L+ L  L 
Sbjct: 825 DLSELQ---SLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLD 880

Query: 314 IDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           + G   +  LP+ +  ++ L+ L     SE  +  + I K
Sbjct: 881 LTGCYNMHGLPDSISNMSSLTLLNTATGSECVFHKTQIIK 920


>gi|297791225|ref|XP_002863497.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309332|gb|EFH39756.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 846

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 14/277 (5%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           ++R   W +FPL+TL N  +  NLV L++P S++ QLWD  ++   L+ +DL +S  L  
Sbjct: 541 QVRCLHWLKFPLETLPNDFNPINLVDLRLPYSEIEQLWDGDKDTPCLRWVDLNHSSKLCS 600

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           L  LS A+ L+ L+L  C++L      ++ +  L  L+L  C SL SLP  ++   LK L
Sbjct: 601 LSGLSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLP-EMNLISLKTL 659

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L GCS  K  P ++      TL L G  I +LP++++ L  +  L +  CK LE I   
Sbjct: 660 TLSGCSTFKEFPLISDN--IETLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGR 717

Query: 224 IFKLQFLESIRIHRCPNLQF---LEMPSCNI---DGTRSKEQPS----SELKLKKCPRPE 273
           + +L+ L+ + +  C NL+    + M S NI   DGT  +  P       L L +  +  
Sbjct: 718 VGELKALQELILSDCLNLKIFPEINMSSLNILLLDGTAIEVMPQLPSLQYLCLSRNAKIS 777

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
            LP G      L  L++  C +   +P+   NLQ L+
Sbjct: 778 YLPDGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLD 814



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 95/183 (51%), Gaps = 14/183 (7%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L LK C   ESLP    +  SL +L +  C  F+  P    N++ L    +DGTAI +LP
Sbjct: 637 LNLKGCTSLESLPEMNLI--SLKTLTLSGCSTFKEFPLISDNIETL---YLDGTAISQLP 691

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN-----I 378
             + +L  L  L +K+C  LE I   + +LK+++ + +S+C NLK FPEI   +     +
Sbjct: 692 TNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEINMSSLNILLL 751

Query: 379 DGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           DG+ IE +P       L L++ +K+  LP  +     L  L++  C  L  +P+   NL+
Sbjct: 752 DGTAIEVMPQLPSLQYLCLSRNAKISYLPDGISQLSQLKWLDLKYCTSLTSVPEFPPNLQ 811

Query: 435 ALE 437
            L+
Sbjct: 812 CLD 814



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 77/272 (28%)

Query: 303 LGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
           L   + L RL ++G T ++ LP  + ++ +L+ L LK C+ LE +      L S++++ +
Sbjct: 604 LSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLPE--MNLISLKTLTL 661

Query: 362 SNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
           S CS  K FP     I    +DG+ I ++P+++ KL +                L  L +
Sbjct: 662 SGCSTFKEFPLISDNIETLYLDGTAISQLPTNMEKLQR----------------LVVLNM 705

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
            DCK LE +P  +G L+AL+EL +                                    
Sbjct: 706 KDCKMLEEIPGRVGELKALQELILS----------------------------------- 730

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
                      DC N    P EI N+  L +L + GTAI  +P    QL SL++L LS N
Sbjct: 731 -----------DCLNLKIFP-EI-NMSSLNILLLDGTAIEVMP----QLPSLQYLCLSRN 773

Query: 538 -NLQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
             +  +P+ ++QLS L  L L    +L  +PE
Sbjct: 774 AKISYLPDGISQLSQLKWLDLKYCTSLTSVPE 805



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 28/223 (12%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREV 449
           + LN  SKL SL S L   + L  L +  C  L+ LP ++  ++ L  L ++G T +  +
Sbjct: 590 VDLNHSSKLCSL-SGLSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESL 648

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P+ +  ++L  L L  CS+F+  P    +S ++ +L  +D     +LP  +  L+ L VL
Sbjct: 649 PE-MNLISLKTLTLSGCSTFKEFP---LISDNIETL-YLDGTAISQLPTNMEKLQRLVVL 703

Query: 510 TIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPE----SLN-------------QLS 550
            +K    + E+P  +G+L +L+ L+LSD  NL+I PE    SLN             QL 
Sbjct: 704 NMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEINMSSLNILLLDGTAIEVMPQLP 763

Query: 551 SLVSLKLSNN-NLERIPERLDPLSSLKYLDL-FENNLDRIPEY 591
           SL  L LS N  +  +P+ +  LS LK+LDL +  +L  +PE+
Sbjct: 764 SLQYLCLSRNAKISYLPDGISQLSQLKWLDLKYCTSLTSVPEF 806


>gi|238481459|ref|NP_001154757.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007336|gb|AED94719.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1114

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 6   SEIQINPYTFSKMTELRLLK----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
            E+ ++   F  M  LR L+      G     +   ++ +P   LR   W ++P K+L  
Sbjct: 527 GEVSVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP--RLRLLYWDRYPRKSLPR 584

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               E LV L MP S +  LW  ++ L +LK I+L  S  L ++P+LS A NLE L L  
Sbjct: 585 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 644

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI  L+KLE+LD+  C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 645 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 704

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLESI--RIH 236
               TL    + IE++P S+ C S + +L I   S KRL ++   I  L    S   RI 
Sbjct: 705 --IKTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPCITLLSLRGSGIERIT 762

Query: 237 RC----PNLQFLEMPSC 249
            C      L +L + SC
Sbjct: 763 DCVIGLTRLHWLNVDSC 779



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 57/277 (20%)

Query: 431 GNLEALEELRV----EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           G +E L  L++        ++E+P       L +L L+ C S   LPS +    +L  LE
Sbjct: 606 GGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSI---SNLHKLE 662

Query: 487 IID---CKNFMRLPDEIGNLEYLKVLTIKGTA---------------------IREVPES 522
           I+D   C     +P  I NL  L+ L + G +                     I +VP S
Sbjct: 663 ILDVKFCSMLQVIPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPS 721

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G  S L+ L +S  +L+ +   ++    +  L L  + +ERI + +  L+ L +L++  
Sbjct: 722 VGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGSGIERITDCVIGLTRLHWLNVDS 778

Query: 583 ----NNLDRIPEYLRSFPTSIPSEFTSLRLS-------VDLRNCLKLDPNELSEIIKDGW 631
                ++  +P  L+    +       +R S       +D  NCLKLD     E  K G 
Sbjct: 779 CRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFNNCLKLD-----EEAKRGI 833

Query: 632 MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           +++SV      ++ +  P  +IP+ F H++TG +I++
Sbjct: 834 IQRSV------SRYICLPCKKIPEEFTHKATGKSITI 864



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 36/198 (18%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++E+P  L +   L +L L++C  L  + SSI  L  +E +++  CS L+  P     NI
Sbjct: 625 LKEIPN-LSKATNLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQVIP----TNI 679

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           + + +ER     L ++ CS+L + P      K+L    I    K+E +P  +G    L++
Sbjct: 680 NLASLER-----LDVSGCSRLRTFPDISSNIKTL----IFGNIKIEDVPPSVGCWSRLDQ 730

Query: 439 LRV--------------------EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           L +                     G+GI  +   +  + L++L      S   L S L +
Sbjct: 731 LHISSRSLKRLMHVPPCITLLSLRGSGIERITDCV--IGLTRLHWLNVDSCRKLKSILGL 788

Query: 479 SKSLTSLEIIDCKNFMRL 496
             SL  L+  DC +  R+
Sbjct: 789 PSSLKVLDANDCVSLKRV 806


>gi|8843883|dbj|BAA97409.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1018

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 6   SEIQINPYTFSKMTELRLLK----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
            E+ ++   F  M  LR L+      G     +   ++ +P   LR   W ++P K+L  
Sbjct: 499 GEVSVSKDAFEGMRNLRFLRIYRLLGGEVTLQIPEDMDYIP--RLRLLYWDRYPRKSLPR 556

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               E LV L MP S +  LW  ++ L +LK I+L  S  L ++P+LS A NLE L L  
Sbjct: 557 RFKPERLVELHMPRSNLELLWGGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLES 616

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI  L+KLE+LD+  C  L  +PT+I+   L+RL + GCS L+  P ++S 
Sbjct: 617 CLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDISSN 676

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLESI--RIH 236
               TL    + IE++P S+ C S + +L I   S KRL ++   I  L    S   RI 
Sbjct: 677 I--KTLIFGNIKIEDVPPSVGCWSRLDQLHISSRSLKRLMHVPPCITLLSLRGSGIERIT 734

Query: 237 RC----PNLQFLEMPSC 249
            C      L +L + SC
Sbjct: 735 DCVIGLTRLHWLNVDSC 751



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 57/277 (20%)

Query: 431 GNLEALEELRV----EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           G +E L  L++        ++E+P       L +L L+ C S   LPS +    +L  LE
Sbjct: 578 GGIEPLPNLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSI---SNLHKLE 634

Query: 487 IID---CKNFMRLPDEIGNLEYLKVLTIKGTA---------------------IREVPES 522
           I+D   C     +P  I NL  L+ L + G +                     I +VP S
Sbjct: 635 ILDVKFCSMLQVIPTNI-NLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPS 693

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G  S L+ L +S  +L+ +   ++    +  L L  + +ERI + +  L+ L +L++  
Sbjct: 694 VGCWSRLDQLHISSRSLKRL---MHVPPCITLLSLRGSGIERITDCVIGLTRLHWLNVDS 750

Query: 583 ----NNLDRIPEYLRSFPTSIPSEFTSLRLS-------VDLRNCLKLDPNELSEIIKDGW 631
                ++  +P  L+    +       +R S       +D  NCLKLD     E  K G 
Sbjct: 751 CRKLKSILGLPSSLKVLDANDCVSLKRVRFSFHNPMHTLDFNNCLKLD-----EEAKRGI 805

Query: 632 MKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
           +++SV      ++ +  P  +IP+ F H++TG +I++
Sbjct: 806 IQRSV------SRYICLPCKKIPEEFTHKATGKSITI 836


>gi|21655201|gb|AAM28915.1| NBS [Pinus taeda]
          Length = 416

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 20/297 (6%)

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           CPN   LP  +  + +L  L + G+ ++ L E   Q  L  + EL+  + L  I  SI +
Sbjct: 100 CPN-RFLPSWIP-MDSLRVLQVSGSVLKTLWEDDSQPPLQLR-ELEINAPLSNIPGSIGR 156

Query: 353 LKSVESIEI----SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           LK +E   +    S   NL   P + FC++            L L +CSK++SLP    +
Sbjct: 157 LKHLERFVVGKYLSGQVNLTELP-VEFCHLQSL-------KALVLTECSKIKSLPEFGAL 208

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQL-ALSKLKLKKC 466
              L  +++  C+ LERLPD L  L  L  + + +   +  +P ++ +L  L  + L+ C
Sbjct: 209 LMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLSDCHDLVTLPDNIGRLRCLQHIDLQGC 268

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQ 525
            + E LP        L  + +  C +  RLPD  G L YL+ + + G  ++  +P S G 
Sbjct: 269 HNLERLPDSFGELTDLRHINLSGCHDLQRLPDSFGKLRYLQHIDLHGCHSLEGLPISFGD 328

Query: 526 LSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           L +LE++ LS+ +NL+ +PES+  LS L  + LS  +NLER+P+    L  L+YLD+
Sbjct: 329 LMNLEYINLSNCHNLERLPESIGNLSDLRHIDLSGCHNLERLPDNFRELEELRYLDV 385



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 11/224 (4%)

Query: 295 NFERLPDELGNLQALNRLII-DGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           N   LP E  +LQ+L  L++ + + I+ LPE    L  L  ++L  C  LE +  S+  L
Sbjct: 174 NLTELPVEFCHLQSLKALVLTECSKIKSLPEFGALLMWLRHIDLSFCRNLERLPDSLHYL 233

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
             +  I +S+C +L   P       D  G  R    +  L  C  LE LP S      L 
Sbjct: 234 SHLRLINLSDCHDLVTLP-------DNIGRLRCLQHI-DLQGCHNLERLPDSFGELTDLR 285

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFES 471
            + +  C  L+RLPD  G L  L+ + + G   +  +P S   L  L  + L  C + E 
Sbjct: 286 HINLSGCHDLQRLPDSFGKLRYLQHIDLHGCHSLEGLPISFGDLMNLEYINLSNCHNLER 345

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
           LP  +     L  +++  C N  RLPD    LE L+ L ++G +
Sbjct: 346 LPESIGNLSDLRHIDLSGCHNLERLPDNFRELEELRYLDVEGCS 389



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 123/284 (43%), Gaps = 44/284 (15%)

Query: 217 LENISSSIFKLQFLESIRIHRC----PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           L NI  SI +L+ LE   + +      NL  L +  C++   ++       L L +C + 
Sbjct: 147 LSNIPGSIGRLKHLERFVVGKYLSGQVNLTELPVEFCHLQSLKA-------LVLTECSKI 199

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI--IDGTAIRELPEGLGQLA 330
           +SLP    +   L  +++  C N ERLPD L  L  L RLI   D   +  LP+ +G+L 
Sbjct: 200 KSLPEFGALLMWLRHIDLSFCRNLERLPDSLHYLSHL-RLINLSDCHDLVTLPDNIGRLR 258

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV 390
            L  ++L+ C  LE +  S  +L  +  I +S C +L+  P       D  G  R    +
Sbjct: 259 CLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHDLQRLP-------DSFGKLRYLQHI 311

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
             L+ C  LE LP S     +L  + + +C  LERLP+ +GNL  L  + + G       
Sbjct: 312 -DLHGCHSLEGLPISFGDLMNLEYINLSNCHNLERLPESIGNLSDLRHIDLSG------- 363

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
                          C + E LP      + L  L++  C N +
Sbjct: 364 ---------------CHNLERLPDNFRELEELRYLDVEGCSNLI 392



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 38/313 (12%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWH----QFPLKTLNILHWENLVS 69
           ++  M  LR+L+  GS  K +    +  P  +LR  E +      P     + H E  V 
Sbjct: 107 SWIPMDSLRVLQVSGSVLKTLWED-DSQPPLQLRELEINAPLSNIPGSIGRLKHLERFVV 165

Query: 70  LKMPGSKV--TQLWDDVQNLVSLKRIDLKYSKLLTKLPDL-SLAQNLEILDLGYCSSLTE 126
            K    +V  T+L  +  +L SLK + L     +  LP+  +L   L  +DL +C +L  
Sbjct: 166 GKYLSGQVNLTELPVEFCHLQSLKALVLTECSKIKSLPEFGALLMWLRHIDLSFCRNLER 225

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRST 185
              S+ YL+ L +++L  C  L +LP +I   + L+ + L+GC NL              
Sbjct: 226 LPDSLHYLSHLRLINLSDCHDLVTLPDNIGRLRCLQHIDLQGCHNL-------------- 271

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                   E LP S   L+++  + +  C  L+ +  S  KL++L+ I +H C +L+ L 
Sbjct: 272 --------ERLPDSFGELTDLRHINLSGCHDLQRLPDSFGKLRYLQHIDLHGCHSLEGLP 323

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
           +   ++            + L  C   E LP        L  +++  C N ERLPD    
Sbjct: 324 ISFGDLMNLEY-------INLSNCHNLERLPESIGNLSDLRHIDLSGCHNLERLPDNFRE 376

Query: 306 LQALNRLIIDGTA 318
           L+ L  L ++G +
Sbjct: 377 LEELRYLDVEGCS 389



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 67/303 (22%)

Query: 374 PFCNIDGS-----GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           P  NI GS      +ER       L+    L  LP   C  +SL +L + +C K++ LP 
Sbjct: 146 PLSNIPGSIGRLKHLERFVVGKY-LSGQVNLTELPVEFCHLQSLKALVLTECSKIKSLP- 203

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           E G L                      + L  + L  C + E LP  L+    L  + + 
Sbjct: 204 EFGAL---------------------LMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLS 242

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESL 546
           DC + + LPD IG L  L+ + ++G   +  +P+S G+L+ L  + LS  ++LQ +P+S 
Sbjct: 243 DCHDLVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHDLQRLPDSF 302

Query: 547 NQLSSLVSLKLSN-------------------------NNLERIPERLDPLSSLKYLDLF 581
            +L  L  + L                           +NLER+PE +  LS L+++DL 
Sbjct: 303 GKLRYLQHIDLHGCHSLEGLPISFGDLMNLEYINLSNCHNLERLPESIGNLSDLRHIDLS 362

Query: 582 E-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC--LKLDPNELSEIIKDGWMKQSVNG 638
             +NL+R+P+  R        E   LR  +D+  C  L +D  E+  I  +  +   VN 
Sbjct: 363 GCHNLERLPDNFR--------ELEELRY-LDVEGCSNLIIDRFEIIGISDNLPVAHQVNW 413

Query: 639 ETY 641
             Y
Sbjct: 414 NKY 416


>gi|240255823|ref|NP_193173.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658031|gb|AEE83431.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 168/369 (45%), Gaps = 27/369 (7%)

Query: 2   SKINSEIQINPYTFSKMTELRLL-----KFCGSKNKCMVHSLEGVPFTELRYFEWHQFPL 56
           S IN  I I+   F +M  LR L     ++  +    +   LE  P   LR   W  +P 
Sbjct: 493 SGINKVI-ISEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLEFPP--HLRLLRWEAYPS 549

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             L    H E LV L M  S++ +LW   Q L +LK++DL  S  L +LPDLS A NLE 
Sbjct: 550 NALPTTFHPEYLVELDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLER 609

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L+L YC SL E  SS   L KLE L +  C  L  +PT I+   L    + GC  LK  P
Sbjct: 610 LELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCFQLKKFP 669

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE--SI 233
            + S H+ S L +    +EELP+SI   + +  L+I      + ++     L +L+    
Sbjct: 670 GI-STHI-SRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCT 727

Query: 234 RIHRCPNL--QFLEMPSCNIDGTRS----KEQPSSELKLKKCPRPESLPSGQCM--FKSL 285
            I + P+      E+   +I G R+     + P S   L  C   ESL S  C+    S 
Sbjct: 728 GIEKIPDWIKDLHELSFLHIGGCRNLKSLPQLPLSIRWLNACD-CESLESVACVSSLNSF 786

Query: 286 TSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
             L   +C   N E   D +      +  I+ G   RE+PE     A  + L ++  S+ 
Sbjct: 787 VDLNFTNCFKLNQETRRDLIQQSFFRSLRILPG---REVPETFNHQAKGNVLTIRPESDS 843

Query: 344 EYISSSIFK 352
           ++ +SS FK
Sbjct: 844 QFSASSRFK 852



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 48/326 (14%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++L+ K S+LE L        +L  +++     L+ LPD L N   LE L +    
Sbjct: 558 PEYLVELDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPD-LSNATNLERLELSYCK 616

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + E+P S ++L  L  L +  C+  E +P+ +    +L SL+  +     +L    G  
Sbjct: 617 SLVEIPSSFSELRKLETLVIHNCTKLEVVPTLI----NLASLDFFNMHGCFQLKKFPGIS 672

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSN 559
            ++  L I  T + E+P S+   + L  L++S +     L  +P       SL  L L  
Sbjct: 673 THISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLP------LSLTYLDLRC 726

Query: 560 NNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIP-------------SEFTS 605
             +E+IP+ +  L  L +L +    NL  +P+     P SI              +  +S
Sbjct: 727 TGIEKIPDWIKDLHELSFLHIGGCRNLKSLPQ----LPLSIRWLNACDCESLESVACVSS 782

Query: 606 LRLSVDLR--NCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTG 663
           L   VDL   NC KL+     ++I+          +++       PG E+P+ F HQ+ G
Sbjct: 783 LNSFVDLNFTNCFKLNQETRRDLIQ----------QSFFRSLRILPGREVPETFNHQAKG 832

Query: 664 STISLKTPQPTGYNKLMGFAFCVVVA 689
           + ++++    + ++    F  C V++
Sbjct: 833 NVLTIRPESDSQFSASSRFKACFVIS 858



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 58/287 (20%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 581 LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIH 637

Query: 363 NCSNLKGFP------EIPFCN---------------------IDGSGIERIPSSVLKLNK 395
           NC+ L+  P       + F N                     ID + +E +P+S++    
Sbjct: 638 NCTKLEVVPTLINLASLDFFNMHGCFQLKKFPGISTHISRLVIDDTLVEELPTSII---L 694

Query: 396 CSKLESLP-SSLCMFKSLT----SLEIID--CKKLERLPDELGNLEALEELRVEGTGIRE 448
           C++L +L  S    FK+LT    SL  +D  C  +E++PD + +L  L  L +   G R 
Sbjct: 695 CTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCTGIEKIPDWIKDLHELSFLHI--GGCRN 752

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE----IGNLE 504
           + KSL QL LS   L  C   ESL S   VS SL S   ++  N  +L  E    +    
Sbjct: 753 L-KSLPQLPLSIRWLNACDC-ESLESVACVS-SLNSFVDLNFTNCFKLNQETRRDLIQQS 809

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSS 551
           + + L I     REVPE+    +         N L I PES +Q S+
Sbjct: 810 FFRSLRI--LPGREVPETFNHQA-------KGNVLTIRPESDSQFSA 847


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 128/251 (50%), Gaps = 22/251 (8%)

Query: 377 NIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
           N+  + +  +P+ + +L    +LE       S+P+ + +  SL  L +I C +L  +P E
Sbjct: 92  NLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLI-CNQLTSVPAE 150

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
           +G L +L+EL + GT +R +P  + QL +L  L+L+  +   S+P+ +    SL  L + 
Sbjct: 151 IGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQN-NHLTSVPAEIGQLTSLRELHLG 209

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                  +P EIG L  L+VL +    +   P  +GQL+SL  L L DN    +P  + Q
Sbjct: 210 GNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQ 269

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE-----------YLR-SFP 596
           L+SL  L+L  N L  +P  +  L+SLK L LF+N L  +P            YLR +  
Sbjct: 270 LTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLL 329

Query: 597 TSIPSEFTSLR 607
           TS+P+    LR
Sbjct: 330 TSVPTVVRELR 340



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 156/364 (42%), Gaps = 55/364 (15%)

Query: 249 CNIDGTRSKEQ--------------PSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
            N DGTR+ +               P  + +  +  +PE     +     +  LE+    
Sbjct: 14  ANDDGTRTFDDEGDLEVLRTWRAMCPELQGRWPEAAQPEDWRGVKWENGRVVELELEGFG 73

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
               LP E+G L AL+ L +    +R LP  +GQL  L +LEL + ++L  + + I  L 
Sbjct: 74  LIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLEL-SSNQLTSVPAEIGLLT 132

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
           S+  + +                                  C++L S+P+ +    SL  
Sbjct: 133 SLRQLHL---------------------------------ICNQLTSVPAEIGQLTSLKE 159

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
           L +    +L  LP E+  L +LE L ++   +  VP  + QL +L +L L       S+P
Sbjct: 160 LSLAGT-ELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGNWRLTSVP 218

Query: 474 SRLYVSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           + +     LTSL+++D         P EIG L  L  L +       VP  +GQL+SL  
Sbjct: 219 AEI---GQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRE 275

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
           L L  N L  +P  + QL+SL  L L +N L  +P  +  L+SLK L L +N L  +P  
Sbjct: 276 LRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSVPTV 335

Query: 592 LRSF 595
           +R  
Sbjct: 336 VREL 339



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 116/226 (51%), Gaps = 21/226 (9%)

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           LP E+G L AL  L +    +R +P  + QL +L +L+L   +   S+P+ + +  SL  
Sbjct: 78  LPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLEL-SSNQLTSVPAEIGLLTSLRQ 136

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L +I C     +P EIG L  LK L++ GT +R +P  + QL+SLE L L +N+L  +P 
Sbjct: 137 LHLI-CNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPA 195

Query: 545 SLNQLSSLVSLKLSNN-NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------- 596
            + QL+SL  L L  N  L  +P  +  L+SL+ LDL  N L   P  +           
Sbjct: 196 EIGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFL 255

Query: 597 -----TSIPSEFTSLRLSVDLR---NCLKLDPNELSEI--IKDGWM 632
                TS+P+E   L    +LR   N L   P+E+ ++  +K+ W+
Sbjct: 256 HDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEIGQLTSLKELWL 301



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 17/127 (13%)

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           I  +P  +G+L++L  L L+ N L+ +P  + QL+SL  L+LS+N L  +P  +  L+SL
Sbjct: 75  IGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSL 134

Query: 576 KYLDLFENNLDRIPE----------------YLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
           + L L  N L  +P                  LRS P  I  + TSL +     N L   
Sbjct: 135 RQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEI-WQLTSLEVLELQNNHLTSV 193

Query: 620 PNELSEI 626
           P E+ ++
Sbjct: 194 PAEIGQL 200


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 251/554 (45%), Gaps = 88/554 (15%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           NL +L +  + +  L + + NL  L+R+ L  +++ + LP+ +   +NLE   L   +SL
Sbjct: 99  NLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQI-SHLPECIGKLRNLETF-LISKNSL 156

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
                SI  LNKL+     R K L+SLP SI               L+NL K+     R+
Sbjct: 157 VSIPDSIGDLNKLQDFQAHRNK-LSSLPESI-------------GKLQNLTKLWVS--RN 200

Query: 185 TLPLLGVGIEELPSSIKCLSNIGEL------LIYSCKRLENISSSIFKLQFLESIRIHRC 238
           +L         +P SI  L+ + +L      L Y   R+  +  SI  L  L  +++H  
Sbjct: 201 SL-------TSIPDSICDLNKLQDLRLHTNNLSYLPDRI--VPESICDLHKLHDLQLH-G 250

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            N+QFL      +   R     S+ L          LP   C    L  L++        
Sbjct: 251 NNIQFLPKRIGQLKWLRKLRMSSNSLT--------RLPHSICDLNKLEDLQL-HMNKLSS 301

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP ++G L+ +  L I G +I+ LP+ +G L  L++L   + +++ ++  SI++L+++ +
Sbjct: 302 LPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRL-YAHGNQISHLPESIWELRNLTT 360

Query: 359 IEIS---------NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL-------ESL 402
           + IS         N   ++   +I    +  + +  +P  +  L+   KL       +SL
Sbjct: 361 MWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSL 420

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKL 461
           PSS+     LT L   D  ++  LP+ +G L+ L+ + V+   +  +P ++  L  L  L
Sbjct: 421 PSSIGHLTWLTRLYAHD-NQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDL 479

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           ++ K                          N   LPD +G+L  L  L      +  +P+
Sbjct: 480 RIHK-------------------------NNLSSLPDSVGDLTNLTTLWASNNKLTSIPD 514

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
           S+ +L  L+ L L  N+L  +P ++ ++S L +L ++NN+L  +P+R+  L +L+ L + 
Sbjct: 515 SVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVA 574

Query: 582 ENNLDRIPEYLRSF 595
            N L ++PE +R  
Sbjct: 575 NNQLSQLPESIRKL 588



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 227/503 (45%), Gaps = 82/503 (16%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           I +LP SI  L  +  +L  +  RL ++  SI KL+ L ++ + R  +L+ L    CN+ 
Sbjct: 64  IAKLPPSISTLKQL-RMLHMNSNRLTSLPGSICKLRNLSTLCLERN-SLKTLPNSICNL- 120

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE--IIDCPNFERLPDELGNLQALN 310
                 Q    L L    +   LP  +C+ K L +LE  +I   +   +PD +G+L  L 
Sbjct: 121 ------QQLERLYLNNN-QISHLP--ECIGK-LRNLETFLISKNSLVSIPDSIGDLNKLQ 170

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
                   +  LPE +G+L  L+KL +   S L  I  SI  L  ++ + + + +NL   
Sbjct: 171 DFQAHRNKLSSLPESIGKLQNLTKLWVSRNS-LTSIPDSICDLNKLQDLRL-HTNNLSYL 228

Query: 371 PE--IP--FCNID--------GSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKS 411
           P+  +P   C++         G+ I+ +P  + +L    KL         LP S+C    
Sbjct: 229 PDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNK 288

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES 471
           L  L++    KL  LP ++G L+ ++ L + G  I+ +P S+  L          +    
Sbjct: 289 LEDLQL-HMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISH 347

Query: 472 LPSRLYVSKSLTSL---------------EIIDC---------KNFMR-LPDEIGNLEYL 506
           LP  ++  ++LT++                I +C         KN +  LP++IG+L  L
Sbjct: 348 LPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGL 407

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           K L++ G   + +P S+G L+ L  L   DN + ++PES+  L  L ++ +  N+L  IP
Sbjct: 408 KKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIP 467

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRN 614
             +  L  L+ L + +NNL  +P+ +                TSIP     L    +L++
Sbjct: 468 HNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVCELH---ELQH 524

Query: 615 CLKLDPNEL----SEIIKDGWMK 633
            L+LD N L    + I K  W+K
Sbjct: 525 -LQLDTNSLTFLPTNIGKISWLK 546



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 11/200 (5%)

Query: 397  SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            +KL+ LP SLC   +L  L +    +L+ LPD  G L  LE L +    ++ +P+S+ +L
Sbjct: 879  NKLKCLPESLCELTNLKQL-LAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKL 937

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE-----IGNLEY-LKVLT 510
                      +S   LP  +   K LT+L +    N    P+      I NL   LK L 
Sbjct: 938  ENLTQLCANNNSISELPD-IRKLKKLTALYL--GNNNKTRPNSKFSECISNLPITLKTLW 994

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
            + G ++  +PES+  L +LE L++ +N L+ +P+ + +L SL  L + NN L+ +P+ + 
Sbjct: 995  MFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPD-IS 1053

Query: 571  PLSSLKYLDLFENNLDRIPE 590
             L  L+ L L +N L+++PE
Sbjct: 1054 SLKQLQDLSLTDNKLEKLPE 1073



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 103/224 (45%), Gaps = 26/224 (11%)

Query: 275  LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
            LP   C   +L  L +      + LPD  G L  L  L I    ++ LPE +G+L  L++
Sbjct: 884  LPESLCELTNLKQL-LAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQ 942

Query: 335  LELKNCSELEYISS--SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
            L    C+    IS    I KLK + ++ + N  N K  P   F       I  +P ++  
Sbjct: 943  L----CANNNSISELPDIRKLKKLTALYLGN--NNKTRPNSKFSEC----ISNLPITLKT 992

Query: 393  LNK-CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP- 450
            L    + L SLP S+   ++L  L +I   KLE LPDE+G L +L +L V    ++ +P 
Sbjct: 993  LWMFGNSLTSLPESISTLRNLEEL-MIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPD 1051

Query: 451  ----KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
                K L  L+L+  KL+K      LP  +   KSL S+   D 
Sbjct: 1052 ISSLKQLQDLSLTDNKLEK------LPEGIGNLKSLRSIRFNDV 1089



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 56/95 (58%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP++I   + L  L I    ++ +PESL +L++L+ L+  +N L  +P++  +LS L  L
Sbjct: 861 LPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYL 920

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            +SNN ++ +PE +  L +L  L    N++  +P+
Sbjct: 921 NISNNKVKSLPESIGKLENLTQLCANNNSISELPD 955



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 52/89 (58%)

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
           N + ++ + ++   +  +PE +     L +L +++N L+ +PESL +L++L  L   NN 
Sbjct: 844 NFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNE 903

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIPE 590
           L+ +P+    LS L+YL++  N +  +PE
Sbjct: 904 LDTLPDNFGELSKLEYLNISNNKVKSLPE 932


>gi|297800054|ref|XP_002867911.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313747|gb|EFH44170.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 966

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 56/425 (13%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L +  C+ L ++P +     +L+SL+++      R  +     E LE L ++GT +  +P
Sbjct: 475 LNMRGCTSLRNIPKA-----NLSSLKVLILSDCSRFQEFQVISENLETLYLDGTALETLP 529

Query: 451 KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
            ++  L  L  L L+ C + E LPS L   K+L  L +  C      P + GN+++L++L
Sbjct: 530 PAIGNLQRLVLLNLRSCKALEHLPSSLRKLKALEDLILSGCSKLKSFPTDTGNMKHLRIL 589

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
              GTA++E+   L    SL+ L LS N++  +P ++ QL+ L  L L    NL  +P  
Sbjct: 590 LYDGTALKEIQMILHFKESLQRLCLSGNSMINLPANIKQLNHLKWLDLKYCENLIELPT- 648

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
           L P  +L+YLD   +   ++   +     ++ +E T    +    NC  L+ +  + I  
Sbjct: 649 LPP--NLEYLD--AHGCHKLEHVMDPLAIALITEQTC--STFIFTNCTNLEEDARNTITS 702

Query: 629 DGWMKQSVNG-----ETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM 680
               K  ++        +++++ +   FPG E+P WF+HQ+ GS +  K  QP   + L+
Sbjct: 703 YAERKCQLHACKCYDMGFVSRASFKTCFPGCEVPLWFQHQAVGSVLE-KRLQPNWCDNLV 761

Query: 681 -GFAFCVVVACSVSECCRHESVEDDRK-CNLFDVVC------DRRSEGYDSYTSSYLGKI 732
            G A C VV           S +D+++  + F V C      D  S    ++      + 
Sbjct: 762 SGIALCAVV-----------SFQDNKQLIDCFSVKCASEFKDDNGSCISSNFKVGSWTEP 810

Query: 733 SHVESDHVFLGSSIFAGENSCKRSDEFF------------FHIDRSCCEVKKCGIHFVHA 780
               SDHVF+G + F+     KR +  +            F++     EV KCG   V+ 
Sbjct: 811 GKTNSDHVFIGYASFS--KITKRVESKYSGKCIPAEATLKFNVTDGTHEVVKCGFRLVYV 868

Query: 781 QRQRL 785
           +   L
Sbjct: 869 EPNNL 873



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 26/207 (12%)

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--- 374
            ++ LPE +G +  L  L ++ C+ L  I  +   L S++ + +S+CS  + F  I    
Sbjct: 458 GVKVLPEKMGNMKSLVFLNMRGCTSLRNIPKA--NLSSLKVLILSDCSRFQEFQVISENL 515

Query: 375 -FCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
               +DG+ +E +P ++        L L  C  LE LPSSL   K+L  L +  C KL+ 
Sbjct: 516 ETLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRKLKALEDLILSGCSKLKS 575

Query: 426 LPDELGNLEALEELRVEGTGIREV------PKSLAQLALSKLKLKKCSSFESLPSRLYVS 479
            P + GN++ L  L  +GT ++E+       +SL +L LS       +S  +LP+ +   
Sbjct: 576 FPTDTGNMKHLRILLYDGTALKEIQMILHFKESLQRLCLSG------NSMINLPANIKQL 629

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             L  L++  C+N + LP    NLEYL
Sbjct: 630 NHLKWLDLKYCENLIELPTLPPNLEYL 656



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 52/286 (18%)

Query: 14  TFSKMTELRLLKFCGS------KNKCMVHSLEGVPFT--ELRYFEWHQFPLKTLNI-LHW 64
           +F+ M  LR LK   S      K   ++   EG+ FT  E+R  +W +F L  L +  + 
Sbjct: 380 SFTSMRSLRYLKIYSSICPMECKADQIIVVAEGLQFTLAEVRCLDWLRFSLDKLPLDFNA 439

Query: 65  ENLVSLKMPGSKVTQLWDDVQ-------NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           +NLV+L +P S + Q+W+ V+       N+ SL  ++++    L  +P  +L+ +L++L 
Sbjct: 440 KNLVNLSLPYSSIKQVWEGVKVLPEKMGNMKSLVFLNMRGCTSLRNIPKANLS-SLKVLI 498

Query: 118 LGYCSSLTETH--------------------SSIQYLNKLEVLDLDRCKSLTSLPTSIHS 157
           L  CS   E                       +I  L +L +L+L  CK+L  LP+S+  
Sbjct: 499 LSDCSRFQEFQVISENLETLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRK 558

Query: 158 -KYLKRLVLRGCSNLKNLPKMTSC--HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC 214
            K L+ L+L GCS LK+ P  T    HLR  L   G  ++E+   +    ++  L + S 
Sbjct: 559 LKALEDLILSGCSKLKSFPTDTGNMKHLR-ILLYDGTALKEIQMILHFKESLQRLCL-SG 616

Query: 215 KRLENISSSIFKLQFLESIRIHRC----------PNLQFLEMPSCN 250
             + N+ ++I +L  L+ + +  C          PNL++L+   C+
Sbjct: 617 NSMINLPANIKQLNHLKWLDLKYCENLIELPTLPPNLEYLDAHGCH 662



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 26/221 (11%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L ++ C    ++P       SL  L + DC  F+       NL+ L    +DGTA+  LP
Sbjct: 475 LNMRGCTSLRNIPKAN--LSSLKVLILSDCSRFQEFQVISENLETL---YLDGTALETLP 529

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFC 376
             +G L  L  L L++C  LE++ SS+ KLK++E + +S CS LK FP        +   
Sbjct: 530 PAIGNLQRLVLLNLRSCKALEHLPSSLRKLKALEDLILSGCSKLKSFPTDTGNMKHLRIL 589

Query: 377 NIDGSGIERIPSSVLKLNKC--------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             DG+ ++ I   +L   +         + + +LP+++     L  L++  C+ L  LP 
Sbjct: 590 LYDGTALKEI-QMILHFKESLQRLCLSGNSMINLPANIKQLNHLKWLDLKYCENLIELPT 648

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSF 469
              NLE L     +  G  ++   +  LA++ +  + CS+F
Sbjct: 649 LPPNLEYL-----DAHGCHKLEHVMDPLAIALITEQTCSTF 684



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 14/104 (13%)

Query: 496 LPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD----NNLQIIPESLNQLS 550
           LP+++GN++ L  L ++G T++R +P++   LSSL+ L+LSD       Q+I E+L    
Sbjct: 462 LPEKMGNMKSLVFLNMRGCTSLRNIPKA--NLSSLKVLILSDCSRFQEFQVISENLE--- 516

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLR 593
              +L L    LE +P  +  L  L  L+L     L+ +P  LR
Sbjct: 517 ---TLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLR 557


>gi|297805566|ref|XP_002870667.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316503|gb|EFH46926.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 127/236 (53%), Gaps = 10/236 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           +SKI + + I+   F++M  L+ L F    N  ++  +E +P   LR   W  +P K+L 
Sbjct: 528 ISKIEA-LSISKRAFNRMRNLKFLNFYNG-NISLLEDMEYLP--RLRLLHWGSYPRKSLP 583

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L M  SK+ +LW  +Q L +LK+I+L YS  L ++P+LS A NL+ L L 
Sbjct: 584 LAFKPECLVELYMGSSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLT 643

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI  L KLE+L    C  L  +PT+I+   L+ + +  CS L++ P M+S
Sbjct: 644 GCESLVEIPSSILNLQKLEMLYASGCSKLQVIPTNINLASLEEVNMSNCSRLRSFPDMSS 703

Query: 180 CHLRSTLPLLGVGIEELPSSIK---CLSNIGELLIYSCKRLENISSSIFKLQFLES 232
              R  L + G  I+E P+SI    C  +  ++   S KRL ++  S+  L    S
Sbjct: 704 NIKR--LYVAGTMIKEFPASIVGQWCRLDFLQIGSRSFKRLTHVPESVTHLDLRNS 757



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 63/317 (19%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L   S L+ +P+ L    +L +L +  C+ L  +P  + NL+ LE L   G       
Sbjct: 617 INLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSILNLQKLEMLYASG------- 668

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          CS  + +P+ + ++ SL  + + +C      PD   N+   K L 
Sbjct: 669 ---------------CSKLQVIPTNINLA-SLEEVNMSNCSRLRSFPDMSSNI---KRLY 709

Query: 511 IKGTAIREVPESL-GQLSSLEWLVLSDNN---LQIIPESLNQLSSLVSLKLSNNNLERIP 566
           + GT I+E P S+ GQ   L++L +   +   L  +PES+  L       L N++++ IP
Sbjct: 710 VAGTMIKEFPASIVGQWCRLDFLQIGSRSFKRLTHVPESVTHLD------LRNSDIKMIP 763

Query: 567 ERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSLR---------LSVDL-RN 614
           + +  LS L  L L EN   L  I  +  S  T       SL+         +S  +  N
Sbjct: 764 DCIIGLSHLVSL-LVENCTKLVSIQGHSPSLVTLFADHCISLQSVCCSFHGPISKSMFYN 822

Query: 615 CLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--TISLKTPQ 672
           CLKLD        K G ++QS N      KS+  PG EIP  F HQ++G+  TISL    
Sbjct: 823 CLKLDKES-----KRGIIQQSGN------KSICLPGKEIPAEFTHQTSGNLITISLAPGC 871

Query: 673 PTGYNKLMGFAFCVVVA 689
              ++    F  C++++
Sbjct: 872 EEAFSAFSRFKACLLLS 888


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 41/345 (11%)

Query: 284 SLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
           +L +LE++D        LP E+G L++L RL ++   +  LP+ +G L  L +L L N +
Sbjct: 105 TLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLAN-N 163

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLN 394
           +L  +S  I  L+ ++ + + N + L   P+       + +  +  + +  +P  + +L 
Sbjct: 164 QLRILSKEIGTLQHLQDLSVFN-NQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLE 222

Query: 395 KCSKLE-------SLPSSLCMFKSLTSL------------EIIDCKKLE----------R 425
               L        +LP  +   ++L SL            EI   +KLE           
Sbjct: 223 NLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLAT 282

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           LP E+G L+ LE L +    ++ +P+ + +L   K  + + +  ES P  +    +L  L
Sbjct: 283 LPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRL 342

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
            + +   F  LP+EIG L  L  L ++   +  +P+ +G+L  LEWL L +N L  +P+ 
Sbjct: 343 HL-EYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE 401

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           +  L  L  L L+NN L  +P+ +  L +LK LDL +N L  +PE
Sbjct: 402 IGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPE 446



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 211/462 (45%), Gaps = 44/462 (9%)

Query: 135 NKLEVLDLDRCKS-LTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV 191
           N ++V +LD   + LT  P  I + + LK L L   + LK LPK + +      L L   
Sbjct: 36  NPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSL-ANNQLKTLPKEIETLQKLKWLYLSEN 94

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            ++ LP  I  L N+  L +Y   +L  + S I KL+ LE  R+H   N Q + +P    
Sbjct: 95  QLKTLPKEIGTLQNLEVLDLYK-NQLRTLPSEIGKLRSLE--RLHLEHN-QLITLPQE-- 148

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
            GT    Q   EL L    +   L       + L  L + +      LP E+G LQ L  
Sbjct: 149 IGTL---QDLEELNLANN-QLRILSKEIGTLQHLQDLSVFNN-QLITLPQEIGKLQNLKY 203

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L +    +  LP+ +G+L        +N  +L   ++ +  L      EI    NL+   
Sbjct: 204 LRLAYNQLTTLPKEIGRL--------ENLQDLNIFNNQLITLPQ----EIGTLQNLQSL- 250

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLE 424
                N+  + +  +P  +  L K        ++L +LP  +   + L  L + +  +L+
Sbjct: 251 -----NLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTN-NQLK 304

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLT 483
            LP E+G L+ L+EL +E   +   PK +  L+ L +L L+  + F +LP  +     L 
Sbjct: 305 SLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLE-YNRFTTLPEEIGTLHRLP 363

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + +      LP EIG LE L+ L +    +  +P+ +G L  L+ L L++N L  +P
Sbjct: 364 WLNL-EHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLP 422

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
           + + QL +L  L LS+N L  +PE +  L  L++L L  N L
Sbjct: 423 KEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQL 464



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 223/506 (44%), Gaps = 73/506 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L  +++ L  LK + L  ++L T   ++   QNLE+LDL Y + L
Sbjct: 61  QNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDL-YKNQL 119

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
               S I  L  LE L L+  + L +LP  I +            +L+ L  + +  LR 
Sbjct: 120 RTLPSEIGKLRSLERLHLEHNQ-LITLPQEIGT----------LQDLEEL-NLANNQLRI 167

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                      L   I  L ++ +L +++  +L  +   I KLQ L+ +R+      Q  
Sbjct: 168 -----------LSKEIGTLQHLQDLSVFN-NQLITLPQEIGKLQNLKYLRLAYN---QLT 212

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            +P                   K+  R E+L         L +L           P E+G
Sbjct: 213 TLP-------------------KEIGRLENLQDLNIFNNQLITL-----------PQEIG 242

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            LQ L  L +    +  LP+ +G L  L  L L N ++L  +   I KL+ +E + ++N 
Sbjct: 243 TLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTN-NQLATLPQEIGKLQKLEWLGLTN- 300

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           + LK  P+      +   ++ +   +L+ N+   LES P  +    +L  L + +  +  
Sbjct: 301 NQLKSLPQ------EIGKLQNLKELILENNR---LESFPKEIGTLSNLQRLHL-EYNRFT 350

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLT 483
            LP+E+G L  L  L +E   +  +P+ + +L  L  L L   +   +LP  +   + L 
Sbjct: 351 TLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN-NRLATLPKEIGTLRKLQ 409

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + + +    LP EIG L+ LK L +    +  +PE +G L  LEWL L +N L+ + 
Sbjct: 410 HLYLANNQ-LATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLS 468

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERL 569
           + + QL +L  L LS N     P+ +
Sbjct: 469 QEIGQLQNLKDLDLSGNPFTTFPQEI 494



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 124/547 (22%), Positives = 234/547 (42%), Gaps = 102/547 (18%)

Query: 4   INSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NI 61
           +N+++ I P     +  L+ L    ++ K +   +E +   +L++    +  LKTL   I
Sbjct: 46  VNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETL--QKLKWLYLSENQLKTLPKEI 103

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG-- 119
              +NL  L +  +++  L  ++  L SL+R+ L++++L+T   ++   Q+LE L+L   
Sbjct: 104 GTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANN 163

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
               L++   ++Q+L  L V +      L +LP  I               L+NL  +  
Sbjct: 164 QLRILSKEIGTLQHLQDLSVFN----NQLITLPQEI-------------GKLQNLKYLRL 206

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
            + + T          LP  I  L N+ +L I++  +L  +   I  LQ L+S+ +    
Sbjct: 207 AYNQLT---------TLPKEIGRLENLQDLNIFN-NQLITLPQEIGTLQNLQSLNLANN- 255

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
                                          R  +LP      + L  L + +      L
Sbjct: 256 -------------------------------RLVTLPKEIGTLQKLEWLYLTNN-QLATL 283

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    ++ LP+ +G+L  L +L L+N + LE     I  L +++ +
Sbjct: 284 PQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILEN-NRLESFPKEIGTLSNLQRL 342

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            +   +     PE      +   + R+P   L+ N+ +   +LP  +   + L  L + +
Sbjct: 343 HLE-YNRFTTLPE------EIGTLHRLPWLNLEHNQLT---TLPQEIGRLERLEWLNLYN 392

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVS 479
             +L  LP E+G L  L+ L +    +  +PK + QL                       
Sbjct: 393 -NRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQL----------------------- 428

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL 539
           ++L  L++ D +  + LP+EIG L+ L+ L++K   +R + + +GQL +L+ L LS N  
Sbjct: 429 QNLKDLDLSDNQ-LVTLPEEIGTLQRLEWLSLKNNQLRTLSQEIGQLQNLKDLDLSGNPF 487

Query: 540 QIIPESL 546
              P+ +
Sbjct: 488 TTFPQEI 494



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 36/198 (18%)

Query: 427 PDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           P E+G L+ L+ L +    ++ +PK +    L KLK             LY+S++     
Sbjct: 54  PREIGTLQNLKYLSLANNQLKTLPKEIE--TLQKLKW------------LYLSEN----- 94

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
                    LP EIG L+ L+VL +    +R +P  +G+L SLE L L  N L  +P+ +
Sbjct: 95  -----QLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEI 149

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE---------YLR---S 594
             L  L  L L+NN L  + + +  L  L+ L +F N L  +P+         YLR   +
Sbjct: 150 GTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYN 209

Query: 595 FPTSIPSEFTSLRLSVDL 612
             T++P E   L    DL
Sbjct: 210 QLTTLPKEIGRLENLQDL 227



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%)

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
           R+  E+L     +  L L +N L I P  +  L +L  L L+NN L+ +P+ ++ L  LK
Sbjct: 28  RDFNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLK 87

Query: 577 YLDLFENNLDRIPEYLRSFPT------------SIPSEFTSLR 607
           +L L EN L  +P+ + +               ++PSE   LR
Sbjct: 88  WLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLR 130


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 149/533 (27%), Positives = 246/533 (46%), Gaps = 47/533 (8%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA-QNLEILDLGYCSSLTETH 128
           L +   K++ L  ++  L +L+ +DL +   LT LP   L  QNL++L L  C+ LT   
Sbjct: 53  LNLSFQKLSTLPKEIGELQNLQTLDL-FDNKLTVLPKEILQLQNLQMLGLC-CNQLTILS 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTL 186
             I  L KL  LDL R     +LP  I   + L+ L L   + L  LPK M        L
Sbjct: 111 EEIGQLQKLRALDL-RANQFATLPKEILQLQNLQTLNL-DSNELTALPKEMRQLQKLQKL 168

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            L    +  LP  I  L ++ + L     +   +   I +LQ L+++             
Sbjct: 169 DLRENQLTTLPKEIGQLKSL-QTLYLRANQFATLPKEILQLQNLQAL------------- 214

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLEIIDCPNFERL 299
              N+D       P    +L+K  + +       +LP      KSL +L ++       L
Sbjct: 215 ---NLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLL-ANQLTIL 270

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P+E+G L+ L +L +       LP+ +GQL  L  L L   ++L      I +L++++ +
Sbjct: 271 PEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYG-NQLTAFPKEIEQLQNLQIL 329

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            +S  + L   PE      +   ++ +    L  N+ +KL   P  L   ++L +L++  
Sbjct: 330 NLS-YNRLTTLPE------EIGQLQNLQILNLSYNQLTKL---PKELGKLRNLKTLDL-H 378

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYV 478
             ++   P E+  L+ LE+L    T +  +P  + Q+  L +L L+K +   +LP  +  
Sbjct: 379 AIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEK-NQLTALPKEIGR 437

Query: 479 SKSLTSLEIIDCKN-FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
            ++L  L +    N F  LP EIG L  LK L +    +  +P+ +GQLS LE L L  N
Sbjct: 438 LQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRN 497

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           +L+ +PE + QL +L  L LS N L  IP+ +  L +L+ L L +  L R+P+
Sbjct: 498 SLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPD 550



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 20/309 (6%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L  L +    +  LP+ + QL  L  L L  C++L  +S  I +L+ + +
Sbjct: 63  LPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGL-CCNQLTILSEEIGQLQKLRA 121

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPS 404
           +++   +     P+       +   N+D + +  +P  + +L K  KL+       +LP 
Sbjct: 122 LDLR-ANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPK 180

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   KSL +L  +   +   LP E+  L+ L+ L ++   +  +PK + QL  L KL L
Sbjct: 181 EIGQLKSLQTL-YLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDL 239

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           ++ +   +LP  +   KSL +L ++       LP+EIG L  L+ L +       +P+ +
Sbjct: 240 RE-NQLTTLPKEIGQLKSLQTLYLL-ANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDI 297

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL +L+ L L  N L   P+ + QL +L  L LS N L  +PE +  L +L+ L+L  N
Sbjct: 298 GQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYN 357

Query: 584 NLDRIPEYL 592
            L ++P+ L
Sbjct: 358 QLTKLPKEL 366



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 149/590 (25%), Positives = 258/590 (43%), Gaps = 112/590 (18%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEW--HQFPLKTLNIL 62
           ++++ + P    ++  L++L  C   N+  + S E     +LR  +   +QF      IL
Sbjct: 80  DNKLTVLPKEILQLQNLQMLGLCC--NQLTILSEEIGQLQKLRALDLRANQFATLPKEIL 137

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +NL +L +  +++T L  +++ L  L+++DL+ ++L T   ++   ++L+ L L   +
Sbjct: 138 QLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYL-RAN 196

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH 181
                   I  L  L+ L+LD    LT+LP  +   + L++L LR  + L  LPK     
Sbjct: 197 QFATLPKEILQLQNLQALNLD-SNELTALPKEMRQLQKLQKLDLRE-NQLTTLPKEIG-Q 253

Query: 182 LRS--TLPLLGVGIEELPSSIKCLSNIGELLIYSCK-RLENISSSIFKLQFLESIRIHRC 238
           L+S  TL LL   +  LP  I  L N+ +L  Y C+ R   +   I +LQ L+S+ ++  
Sbjct: 254 LKSLQTLYLLANQLTILPEEIGKLRNLQKL--YLCENRFTTLPKDIGQLQNLQSLYLY-- 309

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
                         G +    P      K+  + ++L      +  LT+           
Sbjct: 310 --------------GNQLTAFP------KEIEQLQNLQILNLSYNRLTT----------- 338

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E+G LQ L  L +    + +LP+ LG+L  L  L+L +  ++      I +L+++E 
Sbjct: 339 LPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDL-HAIQITTFPKEILQLQNLEK 397

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +  S                                  ++L +LP  +   ++L  L  +
Sbjct: 398 LNWSR---------------------------------TQLTTLPGEIGQMQNLKELN-L 423

Query: 419 DCKKLERLPDELGNLEALEELRVEGTG--IREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
           +  +L  LP E+G L+ LEEL +         +PK + QL+                   
Sbjct: 424 EKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLS------------------- 464

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
               +L +L + D      LP EIG L  L+ LT+   ++  +PE +GQL +L  L LS 
Sbjct: 465 ----NLKNLHL-DHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSY 519

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL----DLFE 582
           N L  IP+ + QL +L  L L    L R+P+ +  L  L+ L    D FE
Sbjct: 520 NPLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEELILNPDTFE 569



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 15/156 (9%)

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
           E ++   +  L   + N   ++VL +    +  +P+ +G+L +L+ L L DN L ++P+ 
Sbjct: 30  EEVEQGTYTDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKE 89

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP--------- 596
           + QL +L  L L  N L  + E +  L  L+ LDL  N    +P+ +             
Sbjct: 90  ILQLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDS 149

Query: 597 ---TSIPSEFTSLR--LSVDLR-NCLKLDPNELSEI 626
              T++P E   L+    +DLR N L   P E+ ++
Sbjct: 150 NELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQL 185


>gi|218189697|gb|EEC72124.1| hypothetical protein OsI_05113 [Oryza sativa Indica Group]
          Length = 995

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 22/318 (6%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LPSSI+ L  +G L + S   + ++  S   LQ ++S+ +  C     LE+   NI    
Sbjct: 606 LPSSIRRLMLLGYLDV-SGFPIISLPKSFHTLQNMQSLILSNCS----LEILPANIGSL- 659

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
              Q    L L +      LPS       L  L +  C   E LP+ + NL+ L  L I 
Sbjct: 660 ---QKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDIS 716

Query: 316 GT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           G  A+++LP   G LA LS + L +CS+L  +  S+  L+S+E + +S+C  L+  PE  
Sbjct: 717 GCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSL-NLESLEHLILSDCHELEQLPE-- 773

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
               D   + R+   VL ++ C +++ LP + C  K L  L + DC  L +LP+  G+L 
Sbjct: 774 ----DLGNLYRL--EVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECFGDLS 827

Query: 435 ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            L+ L +   + ++ +P SL  +  L  L L  C S ESLPS L   + L  L++  C N
Sbjct: 828 ELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGYLR-LQVLDLTGCYN 886

Query: 493 FMRLPDEIGNLEYLKVLT 510
              LPD I N+  L +L 
Sbjct: 887 MHGLPDSISNMSSLTLLN 904



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 192/434 (44%), Gaps = 70/434 (16%)

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           P+   LP  +  L  L  L + G  I  LP+    L  +  L L NCS LE + ++I  L
Sbjct: 601 PSNPVLPSSIRRLMLLGYLDVSGFPIISLPKSFHTLQNMQSLILSNCS-LEILPANIGSL 659

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
           + +  +++S  SNL   P         S  + +    L L+ C+KLE LP S+   K L 
Sbjct: 660 QKLCYLDLSRNSNLNKLP--------SSVTDLVELYFLNLSGCAKLEELPESINNLKCLQ 711

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L+I  C  L++LP + G                    SLA+L+   + L  CS    LP
Sbjct: 712 HLDISGCCALQKLPGKFG--------------------SLAKLSF--VNLSSCSKLTKLP 749

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL 532
             L + +SL  L + DC    +LP+++GNL  L+VL +     ++ +P++  QL  L++L
Sbjct: 750 DSLNL-ESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYL 808

Query: 533 VLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            LSD + L  +PE    LS L SL L++ + L+ +P  L  + +LK+L+L          
Sbjct: 809 NLSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNL---------S 859

Query: 591 YLRSFPTSIPSEFTSLRLSV-DLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITKSMY 647
           Y  S   S+PS    LRL V DL  C  +   P+ +S +     +  +   E    K+  
Sbjct: 860 YCVSLE-SLPSSLGYLRLQVLDLTGCYNMHGLPDSISNMSSLTLLNTATGSECVFHKT-- 916

Query: 648 FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSEC----CRH----E 699
                       Q+    ++L        +++    F  +V      C     RH    E
Sbjct: 917 ------------QTIKKHLNLPGTVEHDVHEIENADFSSIVELGRLRCRELEVRHLENVE 964

Query: 700 SVEDDRKCNLFDVV 713
            +ED RK NL D+V
Sbjct: 965 RLEDARKANLRDMV 978



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 172/373 (46%), Gaps = 65/373 (17%)

Query: 103 KLPDLSLAQN--LEILDLGYCSSLTETH-------SSIQYLNKLEVLDLDRCKSLTSLPT 153
           +LP  + +Q   + ILDL   S+  ++        SSI+ L  L  LD+     + SLP 
Sbjct: 573 QLPRKAFSQTSYIRILDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGF-PIISLPK 631

Query: 154 SIHS-KYLKRLVLRGCS------NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           S H+ + ++ L+L  CS      N+ +L K+  C+L  +       + +LPSS+  L  +
Sbjct: 632 SFHTLQNMQSLILSNCSLEILPANIGSLQKL--CYLDLSR---NSNLNKLPSSVTDLVEL 686

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
             L +  C +LE +  SI  L+ L+ + I  C  LQ                        
Sbjct: 687 YFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQ------------------------ 722

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEG 325
                   LP        L+ + +  C    +LPD L NL++L  LI+ D   + +LPE 
Sbjct: 723 -------KLPGKFGSLAKLSFVNLSSCSKLTKLPDSL-NLESLEHLILSDCHELEQLPED 774

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           LG L  L  L++ +C  ++ +  +  +LK ++ + +S+C    G  ++P C  D S ++ 
Sbjct: 775 LGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC---HGLIQLPECFGDLSELQS 831

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
                L L  CSKL+SLP SLC   +L  L +  C  LE LP  LG L  L+ L + G  
Sbjct: 832 -----LNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGYLR-LQVLDLTGCY 885

Query: 445 GIREVPKSLAQLA 457
            +  +P S++ ++
Sbjct: 886 NMHGLPDSISNMS 898



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 15/243 (6%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S + +L   V +LV L  ++L     L +LP+ ++  + L+ LD+  C +L +       
Sbjct: 671 SNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPGKFGS 730

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG- 192
           L KL  ++L  C  LT LP S++ + L+ L+L  C  L+ LP+      R  L +L +  
Sbjct: 731 LAKLSFVNLSSCSKLTKLPDSLNLESLEHLILSDCHELEQLPEDLGNLYR--LEVLDMSD 788

Query: 193 ---IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
              ++ LP +   L ++  L +  C  L  +      L  L+S+ +  C  LQ L    C
Sbjct: 789 CYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLC 848

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           N+   +        L L  C   ESLPS     + L  L++  C N   LPD + N+ +L
Sbjct: 849 NMFNLK-------HLNLSYCVSLESLPSSLGYLR-LQVLDLTGCYNMHGLPDSISNMSSL 900

Query: 310 NRL 312
             L
Sbjct: 901 TLL 903


>gi|297805476|ref|XP_002870622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316458|gb|EFH46881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1127

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 34/305 (11%)

Query: 6   SEIQINPYTFSKMTELRLLK----FCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
            E+ +    F  M  LR L+    + G +    +   +      LR   W  +P  +L  
Sbjct: 572 GEVSVGKGAFEGMRNLRFLRIFRRWFGGEGTLQIPE-DLDYLPLLRLLHWEFYPRTSLPR 630

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               E L+ L MP SK+ +LW  +Q+L +LK IDL +S+ L ++P+LS A NLE L L  
Sbjct: 631 RFQPERLMELHMPYSKIKKLWGGIQSLPNLKIIDLMFSRQLKEIPNLSNATNLEELTLEG 690

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI+ L KL++LD+  C  L  +P++I+   LK L + GCS L+  P+++  
Sbjct: 691 CGSLVELPSSIKNLQKLKILDVGFCCMLQVIPSNINLASLKILTMNGCSRLRTFPEIS-- 748

Query: 181 HLRSTLPLLGVG---IEELPSSIK-CLSNIGELLI--YSCKRLENISSSIFKLQFLESIR 234
              S + +L +G   IE++P S+  CLS +  L I   S KRL ++   I  L       
Sbjct: 749 ---SNIKVLNLGDTDIEDVPPSVAGCLSRLDRLNICSSSLKRLTHVPLFITDL------- 798

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           I    +++   +P C I  TR +      L +K+C + ES+P    +  SL  L+  DC 
Sbjct: 799 ILNGSDIE--TIPDCVIGLTRLE-----WLSVKRCTKLESIPG---LPPSLKVLDANDCV 848

Query: 295 NFERL 299
           + +R+
Sbjct: 849 SLKRV 853



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 178/406 (43%), Gaps = 82/406 (20%)

Query: 410  KSLTSLEIID---CKKLERLPDELGNLEALEELRVEGTG-IREVPKSLAQLA-LSKLKLK 464
            +SL +L+IID    ++L+ +P+ L N   LEEL +EG G + E+P S+  L  L  L + 
Sbjct: 655  QSLPNLKIIDLMFSRQLKEIPN-LSNATNLEELTLEGCGSLVELPSSIKNLQKLKILDVG 713

Query: 465  KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL- 523
             C   + +PS + ++ SL  L +  C      P+   N+   KVL +  T I +VP S+ 
Sbjct: 714  FCCMLQVIPSNINLA-SLKILTMNGCSRLRTFPEISSNI---KVLNLGDTDIEDVPPSVA 769

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSS----LVSLKLSNNNLERIPERLDPLSSLKYLD 579
            G LS L+        L I   SL +L+     +  L L+ +++E IP+ +  L+ L++L 
Sbjct: 770  GCLSRLD-------RLNICSSSLKRLTHVPLFITDLILNGSDIETIPDCVIGLTRLEWLS 822

Query: 580  LFE-NNLDRIPEYLRSFPTSIPSEFTSL---RLS-------VDLRNCLKLDPNELSEIIK 628
            +     L+ IP    S      ++  SL   R S       +   NCLKLD         
Sbjct: 823  VKRCTKLESIPGLPPSLKVLDANDCVSLKRVRFSFHTPTNVLQFSNCLKLD--------- 873

Query: 629  DGWMKQSVNGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
                K+S  G   I KS+Y     PG  IP  F H++TG +I++    P   +    F  
Sbjct: 874  ----KESRRG--IIQKSIYDYVCLPGKNIPADFTHKATGRSITIPLA-PGTLSASSRFKA 926

Query: 685  CVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEG---YDSYTSSYLGKISHVESDHVF 741
             +++            VE      L  + C  RS+G     SY   YL       S H+F
Sbjct: 927  SILIL----------PVE---YAGLRTISCSIRSKGGVTVHSYEFEYLSL--SFRSKHLF 971

Query: 742  L-GSSIFAGENSCKRSD--------EFFFHIDRSCCEVKKCGIHFV 778
            +    +F   N C   D        EF F++  +  ++ +CG+  +
Sbjct: 972  IFHGDLFPQGNKCHEVDVTMSEIIFEFSFNVGNA--KISECGVQIM 1015



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 129/305 (42%), Gaps = 63/305 (20%)

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
           T LP     + L  L + Y S + +    IQ L  L+++DL   + L  +P   ++  L+
Sbjct: 626 TSLPRRFQPERLMELHMPY-SKIKKLWGGIQSLPNLKIIDLMFSRQLKEIPNLSNATNLE 684

Query: 162 RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            L L GC +L                       ELPSSIK L  +  L +  C  L+ I 
Sbjct: 685 ELTLEGCGSLV----------------------ELPSSIKNLQKLKILDVGFCCMLQVIP 722

Query: 222 SSIFKLQFLESIRIHRCPNLQ-FLEMPS----CNIDGTRSKEQPSSELKLKKC-PRPESL 275
           S+I  L  L+ + ++ C  L+ F E+ S     N+  T  ++ P S   +  C  R + L
Sbjct: 723 SNI-NLASLKILTMNGCSRLRTFPEISSNIKVLNLGDTDIEDVPPS---VAGCLSRLDRL 778

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
                  K LT + +                  +  LI++G+ I  +P+ +  L  L  L
Sbjct: 779 NICSSSLKRLTHVPLF-----------------ITDLILNGSDIETIPDCVIGLTRLEWL 821

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
            +K C++LE I      LK +++   ++C +LK    + F           P++VL+ + 
Sbjct: 822 SVKRCTKLESIPGLPPSLKVLDA---NDCVSLK---RVRFSF-------HTPTNVLQFSN 868

Query: 396 CSKLE 400
           C KL+
Sbjct: 869 CLKLD 873



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 65/204 (31%)

Query: 283 KSLTSLEIID---CPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELK 338
           +SL +L+IID       + +P+ L N   L  L ++G  ++ ELP  +  L  L  L++ 
Sbjct: 655 QSLPNLKIIDLMFSRQLKEIPN-LSNATNLEELTLEGCGSLVELPSSIKNLQKLKILDVG 713

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP------------------------ 374
            C  L+ I S+I  L S++ + ++ CS L+ FPEI                         
Sbjct: 714 FCCMLQVIPSNI-NLASLKILTMNGCSRLRTFPEISSNIKVLNLGDTDIEDVPPSVAGCL 772

Query: 375 -------FCN-----------------IDGSGIERIPSSVLKLNK--------CSKLESL 402
                   C+                 ++GS IE IP  V+ L +        C+KLES+
Sbjct: 773 SRLDRLNICSSSLKRLTHVPLFITDLILNGSDIETIPDCVIGLTRLEWLSVKRCTKLESI 832

Query: 403 PSSLCMFKSLTSLEIIDCKKLERL 426
           P    +  SL  L+  DC  L+R+
Sbjct: 833 PG---LPPSLKVLDANDCVSLKRV 853


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 198/400 (49%), Gaps = 34/400 (8%)

Query: 208 ELLIYSCKRLENISSSIFKLQFLE---------SIRIHRCPNLQFLEMPSCNIDGTRSKE 258
           E L     RLE++ + I KL+ LE         ++ +     LQ LE  S  ++  +   
Sbjct: 87  EWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLS--LENNQLTV 144

Query: 259 QPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
            P    KL+K  + +       +LP+     +SL  L +++    + LP E+  LQ L R
Sbjct: 145 LPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNN-RLKTLPKEIWKLQKLKR 203

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L +     R LP+ + QL  L  L++ N ++L  + + I+KL++++ + + + + L   P
Sbjct: 204 LYLGDNQFRTLPKEIDQLQNLEDLDVSN-NQLVTLPNEIWKLQNLKWLYLDD-NQLTVLP 261

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           +      +   +E + S +L  N+ +   +LP  +   + L  L + +  +L  LP E+G
Sbjct: 262 Q------EIGQLENLDSLILSNNQLT---TLPQEIGTLQKLQYLNLSN-NQLRTLPQEIG 311

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            L+ LE L +E   +  +P+ + QL  L  L L   +  ++LP  ++  + L  L  ++ 
Sbjct: 312 TLQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSN-NRLKTLPKGIWKLQRLEWL-YLEH 369

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
            +   LP+EIG L+ L+ L +    ++ +P+ + +L  LEWL L +N L  +P+ ++QL 
Sbjct: 370 AHLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQ 429

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           +L  L LSNN L  +P  +  L SL+ LDL  N     P+
Sbjct: 430 NLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQ 469



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 175/372 (47%), Gaps = 51/372 (13%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E+G L+ L +L +    +  L + +G L  L  L LKN + LE + + I KL+ +E 
Sbjct: 53  LPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKN-NRLESLPNKIGKLRKLEH 111

Query: 359 IEISN------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSS 405
           + + N         +    ++ + +++ + +  +P  + KL K  KL+       +LP+ 
Sbjct: 112 LNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNE 171

Query: 406 LCMFKSLTSL------------EIIDCKKLERL----------PDELGNLEALEELRVEG 443
           +   +SL  L            EI   +KL+RL          P E+  L+ LE+L V  
Sbjct: 172 IGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSN 231

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             +  +P  + +L   K      +    LP  +   ++L SL I+       LP EIG L
Sbjct: 232 NQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSL-ILSNNQLTTLPQEIGTL 290

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           + L+ L +    +R +P+ +G L  LEWL L  N L  +P+ ++QL +L  L LSNN L+
Sbjct: 291 QKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLK 350

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDL---RNCLKLDP 620
            +P+ +  L  L++L L   +L           T++P+E  +L+    L    N LK  P
Sbjct: 351 TLPKGIWKLQRLEWLYLEHAHL-----------TTLPNEIGTLQKLQRLFLSNNRLKTLP 399

Query: 621 NELSEIIKDGWM 632
            E+ ++ K  W+
Sbjct: 400 KEIWKLRKLEWL 411



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 219/509 (43%), Gaps = 90/509 (17%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           D ++N ++++ +DL  + L+T   ++   +NLE L+L   + L      I  L KLE L 
Sbjct: 32  DALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNL-VNNQLAVLVQEIGTLQKLEWLS 90

Query: 142 LDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIK 201
           L +   L SLP  I                  L K+   +L +    L V ++E+ +  K
Sbjct: 91  L-KNNRLESLPNKIGK----------------LRKLEHLNLENN--QLAVLVQEIGTLQK 131

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCPN-------LQFLEMPSC 249
                 E L     +L  +   I KLQ LE +     ++   PN       LQ+L + + 
Sbjct: 132 L-----EWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVN- 185

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS-------LTSLEIIDCPNFE--RLP 300
                R K  P    KL+K  R   L  G   F++       L +LE +D  N +   LP
Sbjct: 186 ----NRLKTLPKEIWKLQKLKR---LYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLP 238

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           +E+  LQ L  L +D   +  LP+ +GQL  L  L L N ++L  +   I  L+ ++ + 
Sbjct: 239 NEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSN-NQLTTLPQEIGTLQKLQYLN 297

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
           +SN                                 ++L +LP  +   + L  L  ++ 
Sbjct: 298 LSN---------------------------------NQLRTLPQEIGTLQELEWLN-LEH 323

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
            +L  LP E+  L+ LE+L +    ++ +PK + +L   +    + +   +LP+ +   +
Sbjct: 324 NQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQ 383

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
            L  L  +       LP EI  L  L+ L +K   +  +P+ + QL +LE+L LS+N L+
Sbjct: 384 KLQRL-FLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLR 442

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +P  + QL SL  L LS N     P+ +
Sbjct: 443 TLPNEIGQLQSLEDLDLSGNPFTTFPQEI 471



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 147/340 (43%), Gaps = 29/340 (8%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
           N+++ + P    K+ +L   K   S N+      E      L+Y       LKTL   I 
Sbjct: 139 NNQLTVLPQEIGKLQKLE--KLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIW 196

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             + L  L +  ++   L  ++  L +L+ +D+  ++L+T   ++   QNL+ L L   +
Sbjct: 197 KLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLD-DN 255

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPK-MTS 179
            LT     I  L  L+ L L   + LT+LP  I +  L++L     SN  L+ LP+ + +
Sbjct: 256 QLTVLPQEIGQLENLDSLILSNNQ-LTTLPQEIGT--LQKLQYLNLSNNQLRTLPQEIGT 312

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ-----FLESIR 234
                 L L    +  LP  I  L N+ +L + S  RL+ +   I+KLQ     +LE   
Sbjct: 313 LQELEWLNLEHNQLAALPQEIDQLQNLEDLNL-SNNRLKTLPKGIWKLQRLEWLYLEHAH 371

Query: 235 IHRCPN----LQFLEMPSCNIDGTRSKEQPSSELKLKKCP----RPESLPSGQCMFKSLT 286
           +   PN    LQ L+     +   R K  P    KL+K      +   L S       L 
Sbjct: 372 LTTLPNEIGTLQKLQ--RLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQ 429

Query: 287 SLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPE 324
           +LE +D  N     LP+E+G LQ+L  L + G      P+
Sbjct: 430 NLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQ 469


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 176/376 (46%), Gaps = 79/376 (21%)

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
           P+    +  L  L +      E LP+E+G LQ L  LI++ T I+ LP  +GQL  L  L
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           +L NC +L+ +   + +L+++E++                 N+  + +E +P S+ +L  
Sbjct: 134 DLGNC-QLQELPEELGQLQNLEAL-----------------NLSANQLEELPPSIGQLQA 175

Query: 396 -------CSKLESLPSSLCMFKSLTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGI 446
                   ++L+ LP+    F  LT LE +      L  LP   G L+AL+ L++    +
Sbjct: 176 LKMADLSSNRLQELPNE---FSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQL 232

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEY 505
            ++P SL QL   +L   + +    +P+++   +SL  L++ D  NF++ LP EIG L+ 
Sbjct: 233 DQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSD--NFIQQLPPEIGQLQA 290

Query: 506 LKVLTIKGTAIREVPE-----------------------SLGQLSSLEWLVLSDNNLQII 542
           LK L I    + ++P                        + G+LS LE L LS+N L+ +
Sbjct: 291 LKSLFITENELSQLPPEFAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEAL 350

Query: 543 PESLNQLSSLVSLKLSNNNL-----------------------ERIPERLDPLSSLKYLD 579
           P+S+ +L  L SL L NN +                       E +PE +  L +L++L 
Sbjct: 351 PKSIKRLKKLSSLNLGNNEIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLI 410

Query: 580 LFENNLDRIPEYLRSF 595
           L++N L  +P YL+  
Sbjct: 411 LYDNELRNLPPYLQDL 426



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 202/410 (49%), Gaps = 54/410 (13%)

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +EELP  I  L N+ E+LI +   ++ + +SI +LQ           NLQ L++ +C +
Sbjct: 93  ALEELPEEIGQLQNL-EVLILNSTGIKRLPASIGQLQ-----------NLQILDLGNCQL 140

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                                + LP      ++L +L +      E LP  +G LQAL  
Sbjct: 141 ---------------------QELPEELGQLQNLEALNL-SANQLEELPPSIGQLQALKM 178

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
             +    ++ELP    QL  L +L L N + L ++ S+  +L++++++++S  + L   P
Sbjct: 179 ADLSSNRLQELPNEFSQLTQLEELALAN-NLLSFLPSNFGQLQALKTLQLSE-NQLDQLP 236

Query: 372 E-------IPFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEI 417
                   +    +  + + +IP+ + +L    +L       + LP  +   ++L SL I
Sbjct: 237 ASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFI 296

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
            +  +L +LP E   L+ L+EL+++   +  +P +  +L+ L +L+L + +  E+LP  +
Sbjct: 297 TE-NELSQLPPEFAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSE-NKLEALPKSI 354

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              K L+SL + + + ++  P    N++ L  L ++G  I E+PE + QL +LE+L+L D
Sbjct: 355 KRLKKLSSLNLGNNEIYL-FPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYD 413

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
           N L+ +P  L  L++L  L++S+N  E  PE L  +  L  L L  +  D
Sbjct: 414 NELRNLPPYLQDLTALRRLEISDNEFETFPEVLYQMRQLNDLILNVDQFD 463



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 200/463 (43%), Gaps = 92/463 (19%)

Query: 43  FTELRYFE-WHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSK 99
           ++ELRY   W Q  L+ L   I   +NL  L             + N   +KR+     +
Sbjct: 80  YSELRYLSLWGQEALEELPEEIGQLQNLEVL-------------ILNSTGIKRLPASIGQ 126

Query: 100 LLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
           L          QNL+ILDLG C  L E    +  L  LE L+L     L  LP SI    
Sbjct: 127 L----------QNLQILDLGNC-QLQELPEELGQLQNLEALNLS-ANQLEELPPSIGQ-- 172

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
                         L  +    L S        ++ELP+    L+ + EL + +   L  
Sbjct: 173 --------------LQALKMADLSSN------RLQELPNEFSQLTQLEELAL-ANNLLSF 211

Query: 220 ISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
           + S+  +LQ L+++++      Q  ++P+      + +     +  L +      +P+  
Sbjct: 212 LPSNFGQLQALKTLQLSEN---QLDQLPASLGQLKQLELLELQDNDLGQ------IPAQI 262

Query: 280 CMFKSLTSLEIIDCPNF-ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
              +SL  L++ D  NF ++LP E+G LQAL  L I    + +LP    QL  L +L+L+
Sbjct: 263 GQLQSLVELDLSD--NFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQ 320

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK 398
             ++L  +  +  KL  +E +++S                  + +E +P S+ +L K S 
Sbjct: 321 E-NKLIALPINFGKLSQLEELQLSE-----------------NKLEALPKSIKRLKKLSS 362

Query: 399 LE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           L          P + C  K+L +L+ ++   +E LP+E+  L+ LE L +    +R +P 
Sbjct: 363 LNLGNNEIYLFPKNACNIKNLLALD-LEGNYIEELPEEISQLQNLEFLILYDNELRNLPP 421

Query: 452 SLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
            L  L AL +L++   + FE+ P  LY  + L  L I++   F
Sbjct: 422 YLQDLTALRRLEISD-NEFETFPEVLYQMRQLNDL-ILNVDQF 462


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 169/355 (47%), Gaps = 68/355 (19%)

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
           T + I+   N E LP E+G LQ L  L +    ++ LP+ +G+L  + +L L N ++L  
Sbjct: 42  TDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSN-NQLTT 100

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           +   I KLK +  ++++N  NL                               L +LP  
Sbjct: 101 LPKDIGKLKKLRELDLTN--NL-------------------------------LTTLPKE 127

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL- 463
           +   ++L  L + +  +L+ LP ++G L+ L EL ++G  ++ +PK + +L  L++L L 
Sbjct: 128 IGQLQNLRELYLYN-NQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLT 186

Query: 464 --------KKCSSFESLPSRLYVSKSLTSL--EIIDCKNFM---------RLPDEIGNLE 504
                   K   + ++L   L ++  LT+L  EI   KN            LP++IG L+
Sbjct: 187 NNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLK 246

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L + G  I  +P+ +GQL +L+ L LS+N L  +P+ + QL +L  L LS N +  
Sbjct: 247 SLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITT 306

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLR 607
           +P+ +  L SL+ L+L  N +  +P+ +                T+IP E   L+
Sbjct: 307 LPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLK 361



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 152/339 (44%), Gaps = 49/339 (14%)

Query: 43  FTELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
            TEL Y   +Q  LKTL   I   + +  L +  +++T L  D+  L  L+ +DL  + L
Sbjct: 65  LTEL-YLSSNQ--LKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDL-TNNL 120

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
           LT LP           ++G   +L E +    Y N+L+           +LP  I   + 
Sbjct: 121 LTTLPK----------EIGQLQNLRELYL---YNNQLK-----------TLPKDIGQLQN 156

Query: 160 LKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           L+ L L G + LK LPK +      + L L    +  LP  I  L N+GELL+ + + L 
Sbjct: 157 LRELYLDG-NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNE-LT 214

Query: 219 NISSSIFKLQFLESIRIHR----CPN-LQFLE-MPSCNIDGTRSKEQPSSELKLKKCP-- 270
            +   I KL+ L+ + +       PN + +L+ +   N+ G +    P    +L+     
Sbjct: 215 TLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVL 274

Query: 271 -----RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
                +  +LP      ++L  L+ +       LP E+G LQ+L  L + G  I  LP+ 
Sbjct: 275 YLSENQLATLPKEIGQLQNLRELD-LSGNQITTLPKEIGELQSLRELNLSGNQITTLPKE 333

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           +G+L  L +L L   +++  I   I  LK+++ + + + 
Sbjct: 334 IGKLQSLRELNL-GGNQITTIPKEIGHLKNLQVLYLDDI 371


>gi|108738502|gb|ABG00784.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 225/559 (40%), Gaps = 161/559 (28%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
           +LK + L+    L  +PDLS  + LE L    C+ L +   S+  L KL  LD  RC  L
Sbjct: 54  NLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 149 TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +     +   K L++L L GCS+L                        LP +I  ++++ 
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLS----------------------VLPENIGAMTSLK 151

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK 267
           ELL+     ++N+  SI +LQ           NL+ L +  C I                
Sbjct: 152 ELLLDGTA-IKNLPESINRLQ-----------NLEILSLRGCKI---------------- 183

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
                                        + LP  +G L++L +L +D TA++ LP  +G
Sbjct: 184 -----------------------------QELPLCIGTLKSLEKLYLDDTALKNLPSXIG 214

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN---IDGSGIE 384
            L  L  L L  C+ L  I  SI +LKS++ + I N S ++  P  P       D S  +
Sbjct: 215 DLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFI-NGSAVEEXPLKPXSLPSLYDXSAXD 273

Query: 385 ------------RIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
                       R+ S +      + +E+LP  +     +  LE+ +CK L+ LP  +G+
Sbjct: 274 XKXLKQXXXSXXRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGD 333

Query: 433 LEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           ++ L  L +EG+ I E+P+   +L                       + L  L + +CK 
Sbjct: 334 MDTLYSLNLEGSNIEELPEEFGKL-----------------------EKLVELRMSNCKM 370

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL--------SDNNL----- 539
             RLP+  G+L+ L  L +K T + E+PES G LS+L  L +        S++N+     
Sbjct: 371 LKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSE 430

Query: 540 ----------------------------QIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
                                         IP+ L +LS L+ L L NN    +P  L  
Sbjct: 431 EPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVK 490

Query: 572 LSSLKYLDLFE-NNLDRIP 589
           LS+L+ L L +   L R+P
Sbjct: 491 LSNLQELSLRDCRELKRLP 509



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 89/365 (24%)

Query: 280 CMFKSLTSLEII---DCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKL 335
           C F+   +L+++    C + E +PD L N +AL +L+ +  T + ++P+ +G L  L  L
Sbjct: 47  CFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHL 105

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK 395
           + + CS+L      +  LK +E + +S CS+L                            
Sbjct: 106 DFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLS--------------------------- 138

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                 LP ++    SL  L ++D   ++ LP+ +  L+ LE L + G  I+E+P  +  
Sbjct: 139 -----VLPENIGAMTSLKEL-LLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGT 192

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L +L KL L   ++ ++LPS +   K+L  L ++ C +  ++PD I  L+ LK L I G+
Sbjct: 193 LKSLEKLYLDD-TALKNLPSXIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGS 251

Query: 515 AIRE-----------------------------------------------VPESLGQLS 527
           A+ E                                               +PE +G L 
Sbjct: 252 AVEEXPLKPXSLPSLYDXSAXDXKXLKQXXXSXXRLNSLLQLQLSSTPIEALPEEIGALH 311

Query: 528 SLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNL 585
            +  L L +   L+ +P+S+  + +L SL L  +N+E +PE    L  L  L +     L
Sbjct: 312 FIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKML 371

Query: 586 DRIPE 590
            R+PE
Sbjct: 372 KRLPE 376



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 397 SKLESLPSSLCMFKSLTSLEII---DCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
           S++ ++ + LC F+   +L+++    C  LE +PD L N EALE+L  E  T + +VPKS
Sbjct: 37  SQILTVKTFLCFFQVDENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS 95

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           +  L  L  L  ++CS        +   K L  L +  C +   LP+ IG +  LK L +
Sbjct: 96  VGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLL 155

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            GTAI+ +PES+ +L +LE L L    +Q +P  +  L SL  L L +  L+ +P  +  
Sbjct: 156 DGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSXIGD 215

Query: 572 LSSLKYLDLFE-NNLDRIPE 590
           L +L+ L L    +L +IP+
Sbjct: 216 LKNLQDLHLVRCTSLSKIPD 235


>gi|189533883|ref|XP_001335202.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Danio rerio]
          Length = 992

 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 155/308 (50%), Gaps = 24/308 (7%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+++  ++ LN   +   +++ELPEGLG      ++ +   ++   + S++F+L  +  
Sbjct: 42  LPEDIKEIEVLN---LGNNSLQELPEGLGSTLTKLRILILRRNKFAIVPSAVFQLSQLVE 98

Query: 359 IEIS-NCSN--------LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SL 402
           ++IS NC N        LKG  ++ F +   + I+ +PS +  L    +L+         
Sbjct: 99  LDISHNCLNHFSEDIDLLKGLKKLCFSH---NKIQYLPSQIGTLQSLEELDISFNELHDF 155

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           P S    + L +L++ D  KL+R P E+  L  LEEL   G  +  +P ++  L   K+ 
Sbjct: 156 PRSFSQLRKLRTLDV-DHNKLQRFPSEILALSDLEELDCSGNKLEGLPGNIMMLQSIKIL 214

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
               +   SLP      ++L SL ++D     RLP   G L+ LK+L +   +  + P+ 
Sbjct: 215 WLSSTHLLSLPETFCELQNLESL-MLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQV 273

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           + +L+ LE L LS N L  +PE + QL +L +L L NN++  +P+ +  L  L+ L L  
Sbjct: 274 IIKLTRLEELYLSRNKLTFLPEEVGQLCNLANLWLDNNSITFLPDSIVELGKLEELVLQG 333

Query: 583 NNLDRIPE 590
           N +  +P+
Sbjct: 334 NQIAILPD 341



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 22/306 (7%)

Query: 40  GVPFTELRYF--EWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKY 97
           G   T+LR      ++F +    +     LV L +  + +    +D+  L  LK++   +
Sbjct: 67  GSTLTKLRILILRRNKFAIVPSAVFQLSQLVELDISHNCLNHFSEDIDLLKGLKKLCFSH 126

Query: 98  SKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS 157
           +K+      +   Q+LE LD+ + + L +   S   L KL  LD+D  K L   P+ I +
Sbjct: 127 NKIQYLPSQIGTLQSLEELDISF-NELHDFPRSFSQLRKLRTLDVDHNK-LQRFPSEILA 184

Query: 158 KYLKRLVLRGCSN--LKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC 214
             L  L    CS   L+ LP  +        L L    +  LP +   L N+ E L+   
Sbjct: 185 --LSDLEELDCSGNKLEGLPGNIMMLQSIKILWLSSTHLLSLPETFCELQNL-ESLMLDN 241

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
             L  +  S  KLQ L+ + +       F + P   I  TR +E   S  KL   P    
Sbjct: 242 NFLTRLPQSFGKLQKLKMLNLSSN---SFEDFPQVIIKLTRLEELYLSRNKLTFLPE--- 295

Query: 275 LPSGQ-CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
              GQ C   +L     +D  +   LPD +  L  L  L++ G  I  LP+  G+LA ++
Sbjct: 296 -EVGQLCNLANLW----LDNNSITFLPDSIVELGKLEELVLQGNQIAILPDNFGKLAKVN 350

Query: 334 KLELKN 339
             ++K+
Sbjct: 351 IWKVKD 356



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 70/338 (20%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTK------LPDLSLAQNLEILDLGYCSSLTETHS 129
           K  +LW D        R +L+   L TK      LP+    + +E+L+LG  +SL E   
Sbjct: 8   KTARLWRDAALRSRKLRSNLRQLTLSTKNSQKITLPED--IKEIEVLNLG-NNSLQELPE 64

Query: 130 SI-QYLNKLEVLDLDRCKSLTSLPTSIH--SKYLKRLVLRGCSN--------LKNLPKMT 178
            +   L KL +L L R K    +P+++   S+ ++  +   C N        LK L K+ 
Sbjct: 65  GLGSTLTKLRILILRRNK-FAIVPSAVFQLSQLVELDISHNCLNHFSEDIDLLKGLKKLC 123

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI----- 233
             H +         I+ LPS I  L ++ EL I S   L +   S  +L+ L ++     
Sbjct: 124 FSHNK---------IQYLPSQIGTLQSLEELDI-SFNELHDFPRSFSQLRKLRTLDVDHN 173

Query: 234 RIHRCPN--LQFLEMPSCNIDGTRSKEQPSSELKLKKC-------PRPESLPSGQCMFKS 284
           ++ R P+  L   ++   +  G + +  P + + L+             SLP   C  ++
Sbjct: 174 KLQRFPSEILALSDLEELDCSGNKLEGLPGNIMMLQSIKILWLSSTHLLSLPETFCELQN 233

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRL-------------IIDGTAIREL--------- 322
           L SL ++D     RLP   G LQ L  L             II  T + EL         
Sbjct: 234 LESL-MLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKLTRLEELYLSRNKLTF 292

Query: 323 -PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
            PE +GQL  L+ L L N S + ++  SI +L  +E +
Sbjct: 293 LPEEVGQLCNLANLWLDNNS-ITFLPDSIVELGKLEEL 329


>gi|357513935|ref|XP_003627256.1| Resistance protein PRG [Medicago truncatula]
 gi|355521278|gb|AET01732.1| Resistance protein PRG [Medicago truncatula]
          Length = 809

 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 134/244 (54%), Gaps = 24/244 (9%)

Query: 7   EIQINPYTFSKMTELRLLKFC--GSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NI 61
           E+ ++P  F+KM++L+ L     GS+N+  +    G+ F   ELRY  W  +PL++L + 
Sbjct: 330 ELHLSPRVFAKMSKLKFLDIYTNGSQNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSK 389

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L +P S++ +LW+ V+++V+L  + L  S  LT+LPD S A +LE+++L  C
Sbjct: 390 FSAENLVRLSLPYSRLKKLWNGVKDIVNLNVLILSSSTFLTELPDFSKAASLEVINLRLC 449

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS-IHSKYLKRLVLRGCSNLKNLPKMTSC 180
                          L+ LDL  C SLTSL ++  H   L+ L L  C+++K    +TS 
Sbjct: 450 ---------------LKELDLSGCISLTSLQSNDTHLSSLRYLSLYNCTSVKEF-SVTSK 493

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
           H+ + L L G  I+ LPSSI   + + E L  +   ++++  SI  L  L  + +H C  
Sbjct: 494 HM-NILDLEGTSIKNLPSSIGLQTKL-EKLYLAHTHIQSLPKSIRNLTRLRHLDLHLCSE 551

Query: 241 LQFL 244
           LQ L
Sbjct: 552 LQTL 555



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 51/309 (16%)

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           +L L +L L  C S  SL S       L+SL  +   N   + +     +++ +L ++GT
Sbjct: 447 RLCLKELDLSGCISLTSLQSN---DTHLSSLRYLSLYNCTSVKEFSVTSKHMNILDLEGT 503

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS 573
           +I+ +P S+G  + LE L L+  ++Q +P+S+  L+ L  L L   + L+ +PE      
Sbjct: 504 SIKNLPSSIGLQTKLEKLYLAHTHIQSLPKSIRNLTRLRHLDLHLCSELQTLPEL---AQ 560

Query: 574 SLKYLDL-----FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
           SL+ LD       EN          +F ++   +    R  V   NCLKL+   L  I  
Sbjct: 561 SLEILDACGCLSLEN---------VAFRSTASEQLKEKRKRVIFWNCLKLNEPSLKAIEL 611

Query: 629 DGWMKQSVNGETYITK-------------SMY-FPGNEIPKWFRHQSTGSTISLKTPQPT 674
           +  +        +I+              S+Y +PG+EIP+W  + +T            
Sbjct: 612 NAQINMMSFSYQHISTWDRDHDHNHNHNHSIYVYPGSEIPEWLEYSTTTHDYITIDLSSA 671

Query: 675 GYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH 734
            Y   +GF F  ++  + SE                 +V  + S+G D     YL +   
Sbjct: 672 PYFSKLGFIFGFIIPTNSSEG---------------QIVKLKISDGQDKGIKMYLSRPRR 716

Query: 735 -VESDHVFL 742
            +ESDHV+L
Sbjct: 717 GIESDHVYL 725


>gi|436836854|ref|YP_007322070.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
 gi|384068267|emb|CCH01477.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
          Length = 801

 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 145/321 (45%), Gaps = 48/321 (14%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L  +  L  L +DG  +  LP  L     L  L L +C EL  +  S+  L  +E +   
Sbjct: 315 LAGVTTLRHLTLDGIRLAALPRSLLANPQLVTLSLVDC-ELTALPESLDNLTRLEEL--- 370

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTS 414
                         ++D + ++ +P+ V        L L++C +L  LP++L     LT 
Sbjct: 371 --------------HLDRNPLQTLPALVGRLTRLRQLSLDRC-ELTELPATLGQLGQLTY 415

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPS 474
           L       L RLP+ LG L  L +L V    + ++P SL QL      L++ ++F +  +
Sbjct: 416 LTATQ-NHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLP----ALERLAAFTNQLT 470

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
           R  V  +      +       +PD +G L  L+ LT+ G  +  +PE++GQL SLE L L
Sbjct: 471 RFPVELAQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTL 530

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE---- 590
            DN L  +P+ + QLS L  L+L NN L  +PE +  L+SL  + +  N L+ +P     
Sbjct: 531 GDNQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGG 590

Query: 591 ------------YLRSFPTSI 599
                       YLR  P  I
Sbjct: 591 WQRLRTASLQLPYLRRLPDQI 611



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 196/443 (44%), Gaps = 61/443 (13%)

Query: 192 GIEELPSSIKCLSNIGEL--LIYSCKRLENISSSIFKLQFLESIRIH------RCPNLQF 243
           G +  P  +  L  +  L  L +S  +L ++++    LQ LE++ +       R P L+ 
Sbjct: 229 GFDTRPDWLIGLGRLTNLRKLTFSSGQLADMNALFTSLQRLETLDLDYVGPADRLPRLRL 288

Query: 244 LEMPS---------------CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
             +P+                ++D T +       L L    R  +LP        L +L
Sbjct: 289 AALPALQSLHLSRYGKEEKAVDLDSTLAGVTTLRHLTLDGI-RLAALPRSLLANPQLVTL 347

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC-------- 340
            ++DC     LP+ L NL  L  L +D   ++ LP  +G+L  L +L L  C        
Sbjct: 348 SLVDC-ELTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTELPAT 406

Query: 341 ----SELEYISS----------SIFKLKSVESIEIS--NCSNLKG----FPEIPFCNIDG 380
                +L Y+++          S+ +L+ +  + +S  + ++L G     P +       
Sbjct: 407 LGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLAAFT 466

Query: 381 SGIERIPSSVLKLNKC----SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
           + + R P  + ++       ++L ++P ++   + L SL +     L  LP+ +G L++L
Sbjct: 467 NQLTRFPVELAQVRHLYLSDNQLTNVPDAVGELRRLRSLTLA-GNPLTSLPETIGQLDSL 525

Query: 437 EELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           E L +    +  +P+ + QL+ LS L+L   +    LP  +    SLT++ +I       
Sbjct: 526 EMLTLGDNQLTALPQRIGQLSRLSWLELGN-NRLRELPESIGSLTSLTAV-VIGNNPLEI 583

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP  +G  + L+  +++   +R +P+ +G    LE L +  + L ++P++L    SL  L
Sbjct: 584 LPASVGGWQRLRTASLQLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVL 643

Query: 556 KLSNNNLERIPERLDPLSSLKYL 578
            LS N L  +PER+  L+ L+ L
Sbjct: 644 TLSGNKLIGLPERMGKLTRLRQL 666



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 195/450 (43%), Gaps = 51/450 (11%)

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L + ++    L +LE LDLD       LP         RL       L  LP + S HL 
Sbjct: 256 LADMNALFTSLQRLETLDLDYVGPADRLP---------RL------RLAALPALQSLHLS 300

Query: 184 STLPLLGVGIEE----LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                   G EE    L S++  ++ +  L +    RL  +  S+     L ++ +  C 
Sbjct: 301 R------YGKEEKAVDLDSTLAGVTTLRHLTLDGI-RLAALPRSLLANPQLVTLSLVDC- 352

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
             +   +P    + TR +E     L L + P  ++LP+       L  L +  C     L
Sbjct: 353 --ELTALPESLDNLTRLEE-----LHLDRNPL-QTLPALVGRLTRLRQLSLDRC-ELTEL 403

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P  LG L  L  L      +  LPE LGQL  L  L + + ++L  +  S+ +L ++E +
Sbjct: 404 PATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNV-SMNDLTDLPGSLRQLPALERL 462

Query: 360 EISNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCM 408
             +  + L  FP    ++    +  + +  +P +V +L +        + L SLP ++  
Sbjct: 463 A-AFTNQLTRFPVELAQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQ 521

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
             SL  L + D  +L  LP  +G L  L  L +    +RE+P+S+  L      +   + 
Sbjct: 522 LDSLEMLTLGD-NQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNP 580

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
            E LP+ +   + L +  +       RLPD+IGN + L+ LTI+   +  +P++L    S
Sbjct: 581 LEILPASVGGWQRLRTASL-QLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRS 639

Query: 529 LEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           L  L LS N L  +PE + +L+ L  L +S
Sbjct: 640 LTVLTLSGNKLIGLPERMGKLTRLRQLVVS 669



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 236/550 (42%), Gaps = 69/550 (12%)

Query: 86  NLVSLKRIDLKYSKLLTKLPDLSLA-----QNLEILDLGYCSSLTETHSSIQYLNKLEVL 140
           +L  L+ +DL Y     +LP L LA     Q+L +   G      +  S++  +  L  L
Sbjct: 265 SLQRLETLDLDYVGPADRLPRLRLAALPALQSLHLSRYGKEEKAVDLDSTLAGVTTLRHL 324

Query: 141 DLDRCKSLTSLPTSI-HSKYLKRLVLRGCS------NLKNLPKMTSCHLRSTLPLLGVGI 193
            LD  + L +LP S+  +  L  L L  C       +L NL ++   HL          +
Sbjct: 325 TLDGIR-LAALPRSLLANPQLVTLSLVDCELTALPESLDNLTRLEELHLDRN------PL 377

Query: 194 EELPSSIKCLSNIGELLIYSCK--RLENISSSIFKLQFLESIRIH--RCPNL--QFLEMP 247
           + LP+ +  L+ + +L +  C+   L      + +L +L + + H  R P    Q  ++ 
Sbjct: 378 QTLPALVGRLTRLRQLSLDRCELTELPATLGQLGQLTYLTATQNHLTRLPESLGQLRQLR 437

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF----KSLTSLEIIDCPNFERLPDEL 303
             N+      + P S  +L    R  +  +    F      +  L + D      +PD +
Sbjct: 438 DLNVSMNDLTDLPGSLRQLPALERLAAFTNQLTRFPVELAQVRHLYLSDN-QLTNVPDAV 496

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           G L+ L  L + G  +  LPE +GQL  L  L L + ++L  +   I +L  +  +E+ N
Sbjct: 497 GELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGD-NQLTALPQRIGQLSRLSWLELGN 555

Query: 364 CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
            + L+  PE          I  + S    +   + LE LP+S+  ++ L +  +     L
Sbjct: 556 -NRLRELPE---------SIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASL-QLPYL 604

Query: 424 ERLPDELGNLEALEELRVEGTGIREVP------KSLAQLALSKLKL----KKCSSFESLP 473
            RLPD++GN + LE+L +E   +  +P      +SL  L LS  KL    ++      L 
Sbjct: 605 RRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGKLTRL- 663

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-------GTAIREVPESLGQL 526
            +L VS    S           LP ++ N   L  LT++       G A+R +  +L +L
Sbjct: 664 RQLVVSARSDSTTGSGLGRLTNLPADLVNCPALTDLTVQQQQAFDGGDALR-LSAALPRL 722

Query: 527 SSLEWLVLSDNNLQ-IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
            +L ++     +L  I+   L    SLV+L L  N L ++P  L  + +L  ++L +NNL
Sbjct: 723 QTLSFINCGITDLSGIVWSKL----SLVNLNLMQNRLSQLPNSLLDMPNLTQINLADNNL 778

Query: 586 DRIPEYLRSF 595
              P  L  F
Sbjct: 779 ---PPQLNRF 785


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 214/441 (48%), Gaps = 52/441 (11%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP+ I  L N+ EL ++   RL    + I +LQ L+ + +      Q + +P     GT 
Sbjct: 76  LPNEIGRLQNLEELDLFH-NRLTTFPNEIVRLQRLKWLYLADN---QLVTLPKE--IGTL 129

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
            K Q    L LK      +LPS     + L  L + +  +   LP E+G LQ L +L ++
Sbjct: 130 QKLQ---HLYLKNN-HLATLPSEIGRLQRLKRLYLYNN-HLMTLPKEIGKLQNLEQLYLE 184

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN---------CSN 366
              +  LP+ +GQL  L  L++ N + L  + + I KL+S++ + +SN            
Sbjct: 185 DNQLTTLPQEIGQLENLQDLDVSN-NHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGK 243

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           L+   E+   N                   ++L +LP  +   + L  L + +  +L  L
Sbjct: 244 LQNLEELNLSN-------------------NQLRTLPQEIGQLQELEWLHL-EHNQLITL 283

Query: 427 PDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           P E+G L+ LE L ++   +  +P  + +L +L +L L+  +   +LP  +   ++L +L
Sbjct: 284 PQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEH-NQLITLPQEIGTLQNLPNL 342

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
            + + +    LP+EIG LE L+ L ++   ++ +P  +GQL +L++L L +N L+ +P  
Sbjct: 343 NLSNNQ-LATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNE 401

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
           + QL +L  L L NN L+ +P  +  L +L+YL+L ENN       L++ P  I  +  +
Sbjct: 402 IGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNL-ENN------QLKTLPNEI-GQLEN 453

Query: 606 LRLSVDLRNCLKLDPNELSEI 626
           L+      N LK  PNE+  +
Sbjct: 454 LQYLNLENNQLKTLPNEIGRL 474



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 253/538 (47%), Gaps = 82/538 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L +  +++  L +++  L  L+ ++L  ++L T   ++   QNLE LDL + + LT   +
Sbjct: 43  LDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDL-FHNRLTTFPN 101

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLL 189
            I  L +L+ L L   + L +LP  I +                L K+   +L++     
Sbjct: 102 EIVRLQRLKWLYLADNQ-LVTLPKEIGT----------------LQKLQHLYLKNN---- 140

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
              +  LPS I  L  +  L +Y+   L  +   I KLQ LE +         +LE    
Sbjct: 141 --HLATLPSEIGRLQRLKRLYLYN-NHLMTLPKEIGKLQNLEQL---------YLE---- 184

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
             D   +                 +LP      ++L  L++ +  +   LP+E+G L++L
Sbjct: 185 --DNQLT-----------------TLPQEIGQLENLQDLDVSNN-HLTTLPNEIGKLRSL 224

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
            RL +    +  LP  +G+L  L +L L N ++L  +   I +L+ +E + + + + L  
Sbjct: 225 KRLNLSNNLLITLPNEIGKLQNLEELNLSN-NQLRTLPQEIGQLQELEWLHLEH-NQLIT 282

Query: 370 FPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSL 415
            P+       + +  +  + +E +P+ + KL    +L        +LP  +   ++    
Sbjct: 283 LPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQN-LPN 341

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
             +   +L  LP+E+G LE L+ L +E   ++ +P  + QL  L  L L+  +  ++LP+
Sbjct: 342 LNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN-NQLKTLPN 400

Query: 475 RLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
            +     L +L+ ++ +N     LP+EIG LE L+ L ++   ++ +P  +GQL +L++L
Sbjct: 401 EI---GQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYL 457

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L +N L+ +P  + +L +L  L L NN L+ +P  +  L +LK L+L  N L  +P+
Sbjct: 458 NLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQ 515



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 210/467 (44%), Gaps = 78/467 (16%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
           L  L +  + +  L  ++  L  LKR+ L  + L+T   ++   QNLE L L   + LT 
Sbjct: 132 LQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLE-DNQLTT 190

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRST 185
               I  L  L+ LD+     LT+LP  I   + LKRL L             S +L  T
Sbjct: 191 LPQEIGQLENLQDLDVSN-NHLTTLPNEIGKLRSLKRLNL-------------SNNLLIT 236

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLE 245
                     LP+ I  L N+ EL + S  +L  +   I +LQ LE + +      Q + 
Sbjct: 237 ----------LPNEIGKLQNLEELNL-SNNQLRTLPQEIGQLQELEWLHLEHN---QLIT 282

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL-----EIIDCPN----- 295
           +P     GT  K     E    K    E+LP+     +SL  L     ++I  P      
Sbjct: 283 LPQE--IGTLQK----LEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTL 336

Query: 296 ------------FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
                          LP+E+G L+ L  L ++   ++ LP  +GQL  L  L L+N ++L
Sbjct: 337 QNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN-NQL 395

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKC 396
           + + + I +L++++ + + N + LK  P        + + N++ + ++ +P+ + +L   
Sbjct: 396 KTLPNEIGQLENLQYLNLEN-NQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENL 454

Query: 397 -------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
                  ++L++LP+ +   ++L  L  ++  +L+ LP+E+G L+ L+ L + G  +  +
Sbjct: 455 QYLNLENNQLKTLPNEIGRLENLQYLN-LENNQLKTLPNEIGRLQNLKVLNLGGNQLVTL 513

Query: 450 PKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           P+ +  L  L  LKLK   +   L  +  + K L  ++++  K+  R
Sbjct: 514 PQEIVGLKHLQILKLKNIPAL--LSEKETIRKLLPDVKVVYSKSKKR 558



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 489 DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
           D K +    + + N   +++L +    +  +P  +G+L  LEWL LS+N L  +P  + +
Sbjct: 23  DNKVYRDFNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGR 82

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE-----------YLR-SFP 596
           L +L  L L +N L   P  +  L  LK+L L +N L  +P+           YL+ +  
Sbjct: 83  LQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHL 142

Query: 597 TSIPSEFTSLR 607
            ++PSE   L+
Sbjct: 143 ATLPSEIGRLQ 153


>gi|15242338|ref|NP_199336.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759608|dbj|BAB11396.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|332007836|gb|AED95219.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1231

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 199/470 (42%), Gaps = 80/470 (17%)

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN--KCSKLESLPSSLCMFK 410
            LK V+    SN ++L G  E P              ++L+LN   C+ L+ LP  +    
Sbjct: 660  LKWVDLSHSSNLNSLMGLSEAP--------------NLLRLNLEGCTSLKELPDEMKDMT 705

Query: 411  SLTSLEIIDCKKLERLPDELGNL-------------------EALEELRVEGTGIREVPK 451
            +L  L +  C  L  LP    N                    E LE L + GT I  +P 
Sbjct: 706  NLVFLNLRGCTSLLSLPKITTNSLKTLILSGCSSFQTFEVISEHLESLYLNGTEINGLPP 765

Query: 452  SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
            ++  L  L  L LK C +  +LP  L   KSL  L++  C      PD    +E L VL 
Sbjct: 766  AIGNLHRLIFLNLKDCKNLATLPDCLGELKSLQELKLSRCSKLKIFPDVTAKMESLLVLL 825

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
            + GT+I E+P S+  LSSL  L LS N N++ +   +  +  L  L+L    NL  +P  
Sbjct: 826  LDGTSIAELPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHLKWLELKYCKNLTSLP-- 883

Query: 569  LDPLSSLKYLDLFENNLDRIPEY----LRSF--PTSIPSEFTSLRLSVDLRNCLKLDPNE 622
                       +   NL  +  +    LR+   P ++P+    +  +    NC +L+   
Sbjct: 884  -----------ILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTNCHELEQVS 932

Query: 623  LSEII-----KDGWMKQSVNGETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPT 674
             + II     K   M        ++ KS+    FPG EIP WF HQ+ GS + L+ PQ  
Sbjct: 933  KNAIISYVQKKSKLMSADRYSPDFVYKSLIGTCFPGCEIPAWFNHQALGSVLILELPQAW 992

Query: 675  GYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH 734
              ++++G A CVVV+       ++ S++    C   +V   + S     ++    G  +H
Sbjct: 993  NSSRIIGIALCVVVSFKEYR-DQNSSLQVQCTCEFTNVSLSQESFMVGGWSEQ--GDETH 1049

Query: 735  -VESDHVFLGSSIFAGENSCKRSDEF--------FFHIDRSCCEVKKCGI 775
             VESDH+F+G +      + K   +F         F +     EV+KC +
Sbjct: 1050 TVESDHIFIGYTTLL---NIKNRQQFPLATEISLRFQVTNGTSEVEKCKV 1096



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 165/375 (44%), Gaps = 34/375 (9%)

Query: 6   SEIQINP---YTFSKMTELRLLKF------CGSKNKCMVHSLEGVPFTE---LRYFEWHQ 53
           SE++  P     F  M+ LR LK         SK +C +H  +G+ F +   +R   W +
Sbjct: 563 SEMEEKPLKRAVFVGMSSLRYLKVYSSLCPTHSKTECKLHLPDGLEFPKDNIVRCLHWVK 622

Query: 54  FPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           FP   L    +  NL+ L++P S +T LW   +   +LK +DL +S  L  L  LS A N
Sbjct: 623 FPGTELPPDFYPNNLIDLRLPYSNITTLWSCTKVAPNLKWVDLSHSSNLNSLMGLSEAPN 682

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  L+L  C+SL E    ++ +  L  L+L  C SL SLP  I +  LK L+L GCS+ +
Sbjct: 683 LLRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCTSLLSLP-KITTNSLKTLILSGCSSFQ 741

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLES 232
              ++ S HL S L L G  I  LP +I  L  +  L +  CK L  +   + +L+ L+ 
Sbjct: 742 TF-EVISEHLES-LYLNGTEINGLPPAIGNLHRLIFLNLKDCKNLATLPDCLGELKSLQE 799

Query: 233 IRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSSELKLKKCPR--------PESLP 276
           +++ RC  L+     +          +DGT   E P S   L    R          +L 
Sbjct: 800 LKLSRCSKLKIFPDVTAKMESLLVLLLDGTSIAELPCSIFHLSSLRRLCLSRNDNIRTLR 859

Query: 277 SGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA--LLSK 334
                   L  LE+  C N   LP    NLQ LN            P+ L      + S 
Sbjct: 860 FDMGHMFHLKWLELKYCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHST 919

Query: 335 LELKNCSELEYISSS 349
               NC ELE +S +
Sbjct: 920 FIFTNCHELEQVSKN 934


>gi|15238104|ref|NP_198969.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178008|dbj|BAB11460.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007307|gb|AED94690.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1038

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 142/287 (49%), Gaps = 30/287 (10%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFC--GSKNKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           MSK+ SE  I+   F  M  LR L+     S  K  +  +E + +   LR   W  +P K
Sbjct: 536 MSKV-SEFSISGRAFEAMRNLRFLRIYRRSSSKKVTLRIVEDMKYLPRLRLLHWEHYPRK 594

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           +L      E LV L MP S + +LW  +Q+L +LK IDL +S+ L ++P+LS A NLE L
Sbjct: 595 SLPRRFQPERLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIPNLSNATNLETL 654

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
            L  CSSL E  SSI  L KL+ L +  CK L  +PT+I+   L+++ +  CS L + P 
Sbjct: 655 TLIKCSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSLEKVSMTLCSQLSSFPD 714

Query: 177 MTSCHLRSTLPLLGVG---IEELPSS-IKCLSNIGELLI--YSCKRLENISSSIFKLQFL 230
           ++       +  L VG   IEE+P S +K  S + +L +   S KRL  +  SI  L   
Sbjct: 715 IS-----RNIKSLDVGKTKIEEVPPSVVKYWSRLDQLSLECRSLKRLTYVPPSITMLSLS 769

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
            S             +P C I  TR +      L +K C +  SLP 
Sbjct: 770 FS---------DIETIPDCVIRLTRLR-----TLTIKCCRKLVSLPG 802



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 137/349 (39%), Gaps = 83/349 (23%)

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           ++E+P       L  L L KCSS   LPS +   + L +L +  CK    +P  I  +  
Sbjct: 639 LKEIPNLSNATNLETLTLIKCSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSL 698

Query: 506 LKV--------------------LTIKGTAIREVPESLGQ-LSSLEWLVL---SDNNLQI 541
            KV                    L +  T I EVP S+ +  S L+ L L   S   L  
Sbjct: 699 EKVSMTLCSQLSSFPDISRNIKSLDVGKTKIEEVPPSVVKYWSRLDQLSLECRSLKRLTY 758

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPS 601
           +P S+  LS      LS +++E IP+ +  L+ L+ L +      +    L S P   PS
Sbjct: 759 VPPSITMLS------LSFSDIETIPDCVIRLTRLRTLTI------KCCRKLVSLPGLPPS 806

Query: 602 -EF------------TSLRLSVDL---RNCLKLDPNELSEIIKDGWMKQSVNGETYITKS 645
            EF             S    V L    NCLKLD     E  +    +Q V G  YI   
Sbjct: 807 LEFLCANHCRSLERVHSFHNPVKLLIFHNCLKLD-----EKARRAIKQQRVEG--YI--- 856

Query: 646 MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDR 705
            + PG ++P  F H++TG++I++          L   A    V+     C     +ED  
Sbjct: 857 -WLPGKKVPAEFTHKATGNSITI---------PLAPVAGTFSVSSRFKACLLFSPIED-- 904

Query: 706 KCNLFDVVCDRRSEGYDSYTSSYLGKI----SHVESDHVFLGSSIFAGE 750
                D+ C  R +G       Y   +    S + ++H+F    IF G+
Sbjct: 905 -FPTNDITCRLRIKGGVQINKFYHRVVILESSKIRTEHLF----IFYGD 948



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 27/218 (12%)

Query: 295 NFERLPDELGNLQALNRLI-IDGTAIRELPE--GLGQLALLSKLELKNCSELEYISSSIF 351
           N E+L    G +Q+L  L  ID +  R+L E   L     L  L L  CS L  + SSI 
Sbjct: 614 NLEKL---WGGIQSLTNLKNIDLSFSRKLKEIPNLSNATNLETLTLIKCSSLVELPSSIS 670

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
            L+ ++++ +  C  LK  P     NI+   +E++  ++     CS+L S P    + ++
Sbjct: 671 NLQKLKALMMFGCKMLKVVP----TNINLVSLEKVSMTL-----CSQLSSFPD---ISRN 718

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE---VPKSLAQLALSKLKLKKCSS 468
           + SL++   K  E  P  +     L++L +E   ++    VP S+  L+LS       S 
Sbjct: 719 IKSLDVGKTKIEEVPPSVVKYWSRLDQLSLECRSLKRLTYVPPSITMLSLS------FSD 772

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            E++P  +     L +L I  C+  + LP    +LE+L
Sbjct: 773 IETIPDCVIRLTRLRTLTIKCCRKLVSLPGLPPSLEFL 810


>gi|168033677|ref|XP_001769341.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679447|gb|EDQ65895.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 308

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 152/329 (46%), Gaps = 62/329 (18%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNC 340
             SL +L++  C +   LP+EL NL +L  L ++G +++  LP  L  L+ L KL+L  C
Sbjct: 8   ITSLKTLDMSGCSSLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDLSYC 67

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S L  + + +  + S++S                                L LN CS+L 
Sbjct: 68  SSLTILPNKLANISSLQS--------------------------------LYLNSCSRLI 95

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-L 458
           SLP+ L    +L +L + DC  L  LP+E  NL +L+EL + G + +   P  LA L+ L
Sbjct: 96  SLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLKELVLSGCSSLISFPNELANLSFL 155

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIR 517
           ++L L  CSS +SLP+ L    SL +  +  C +   LP+E+ NL  L +L + G + + 
Sbjct: 156 TRLNLSGCSSLKSLPNELANLSSLKAFYLSGCSSLTSLPNELANLSSLIILDLSGCSTLT 215

Query: 518 EVPESLGQLSSLEWLVLSD-------------------------NNLQIIPESLNQLSSL 552
            +P  L  L SL  L LS                          + L  +P  L  LSSL
Sbjct: 216 SLPNKLKNLFSLTRLDLSGCSSLASLPNELANLSSLTSLNLSHCSRLTSLPNELANLSSL 275

Query: 553 VSLKLS-NNNLERIPERLDPLSSLKYLDL 580
             L LS  ++L  +P     LSSL  LDL
Sbjct: 276 TILNLSCCSSLTSLPNEFANLSSLTILDL 304



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 37/327 (11%)

Query: 64  WENLVSLK---MPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDL 118
           W N+ SLK   M G S +T L +++ NL SL+ + L     L  LP+ L     L  LDL
Sbjct: 5   WTNITSLKTLDMSGCSSLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDL 64

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKM 177
            YCSSLT   + +  ++ L+ L L+ C  L SLP  + + Y L+ L L  C         
Sbjct: 65  SYCSSLTILPNKLANISSLQSLYLNSCSRLISLPNELTNLYTLEALHLSDC--------- 115

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
                        + +  LP+    LS++ EL++  C  L +  + +  L FL  + +  
Sbjct: 116 -------------LSLTHLPNECTNLSSLKELVLSGCSSLISFPNELANLSFLTRLNLSG 162

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           C +L+ L     N+   ++         L  C    SLP+      SL  L++  C    
Sbjct: 163 CSSLKSLPNELANLSSLKA-------FYLSGCSSLTSLPNELANLSSLIILDLSGCSTLT 215

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            LP++L NL +L RL + G +++  LP  L  L+ L+ L L +CS L  + + +  L S+
Sbjct: 216 SLPNKLKNLFSLTRLDLSGCSSLASLPNELANLSSLTSLNLSHCSRLTSLPNELANLSSL 275

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGI 383
             + +S CS+L   P   F N+    I
Sbjct: 276 TILNLSCCSSLTSLPN-EFANLSSLTI 301



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 121/242 (50%), Gaps = 15/242 (6%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIRE 448
            L ++ CS L SLP+ L    SL  L +  C  L  LP+EL NL  L +L +   + +  
Sbjct: 13  TLDMSGCSSLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDLSYCSSLTI 72

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P  LA ++ L  L L  CS   SLP+ L    +L +L + DC +   LP+E  NL  LK
Sbjct: 73  LPNKLANISSLQSLYLNSCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLK 132

Query: 508 VLTIKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLER 564
            L + G +++   P  L  LS L  L LS  ++L+ +P  L  LSSL +  LS  ++L  
Sbjct: 133 ELVLSGCSSLISFPNELANLSFLTRLNLSGCSSLKSLPNELANLSSLKAFYLSGCSSLTS 192

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNE 622
           +P  L  LSSL  LDL           L S P  + + F+  RL  DL  C  L   PNE
Sbjct: 193 LPNELANLSSLIILDL------SGCSTLTSLPNKLKNLFSLTRL--DLSGCSSLASLPNE 244

Query: 623 LS 624
           L+
Sbjct: 245 LA 246



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 9/173 (5%)

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK-GTA 515
           +L  L +  CSS  SLP+ L    SL  L +  C + + LP+E+ NL YL+ L +   ++
Sbjct: 10  SLKTLDMSGCSSLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDLSYCSS 69

Query: 516 IREVPESLGQLSSLEWLVL-SDNNLQIIPESLNQLSSLVSLKLSNN-NLERIPERLDPLS 573
           +  +P  L  +SSL+ L L S + L  +P  L  L +L +L LS+  +L  +P     LS
Sbjct: 70  LTILPNKLANISSLQSLYLNSCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLS 129

Query: 574 SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           SLK L L           L SFP  + +     RL++   + LK  PNEL+ +
Sbjct: 130 SLKELVL------SGCSSLISFPNELANLSFLTRLNLSGCSSLKSLPNELANL 176


>gi|297788454|ref|XP_002862328.1| hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297307728|gb|EFH38586.1| hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 721

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 158/313 (50%), Gaps = 37/313 (11%)

Query: 4   INSEIQINPYTFSKMTELRLLKFCG-----SKNKCMVHSLEGVPFTELRYFEWHQFPLKT 58
           ++ E+ I+   F  M+ L+ L+F G     S    +   L  +P  +LR  EW +FP+K 
Sbjct: 267 LSGELNISERAFEGMSNLKFLRFHGPYDGQSDKLYLPQGLNNLP-RKLRLIEWSRFPMKC 325

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +    + LV + M  SK+  LW   Q L +LKR+DL+ SK L +LP+LS A NLE L 
Sbjct: 326 LPSNFCTKYLVHIDMWNSKLENLWQGNQPLGNLKRMDLRESKHLKELPNLSTATNLENLT 385

Query: 118 LGYCSSLTETHSSIQYLNKLE--------VLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
           L  CSSL E  SS+  L KL+         LDL  C  L +LPT+I+ + L  L L  C 
Sbjct: 386 LFGCSSLAELPSSLGNLQKLQELRLQGCSTLDLQGCSKLEALPTNINLESLNNLDLTACL 445

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS---IFK 226
            +K+ P++++      L L+   I+E+PS+IK  S++  L +     L+    +   I K
Sbjct: 446 LIKSFPEISTN--IKDLMLMKTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHALDIITK 503

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L F ++         +  E+P      +R +      L LK C R  ++P    +  SL+
Sbjct: 504 LYFNDT---------EIQEIPLWVKKISRLQ-----TLVLKGCKRLVTIPQ---LSDSLS 546

Query: 287 SLEIIDCPNFERL 299
           ++  I+C + ERL
Sbjct: 547 NVIAINCQSLERL 559



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 177/399 (44%), Gaps = 55/399 (13%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L +   L+ LP+ L    +L +L +  C  L  LP  LGNL+ L+ELR++G       
Sbjct: 361 MDLRESKHLKELPN-LSTATNLENLTLFGCSSLAELPSSLGNLQKLQELRLQGC------ 413

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                   S L L+ CS  E+LP+ + + +SL +L++  C      P+   N   +K L 
Sbjct: 414 --------STLDLQGCSKLEALPTNINL-ESLNNLDLTACLLIKSFPEISTN---IKDLM 461

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           +  TAI+EVP ++   S L  L +S N NL+  P +L+ ++ L     ++  ++ IP  +
Sbjct: 462 LMKTAIKEVPSTIKSWSHLRNLEMSYNDNLKEFPHALDIITKLY---FNDTEIQEIPLWV 518

Query: 570 DPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLR----------NCLK 617
             +S L+ L L     L  IP+   S    I     SL RL               NC K
Sbjct: 519 KKISRLQTLVLKGCKRLVTIPQLSDSLSNVIAINCQSLERLDFSFHNHPERYLRFINCFK 578

Query: 618 LDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYN 677
           L+ NE  E I           +T  + S + P  E+P  F +++ GS I +   Q    +
Sbjct: 579 LN-NEAREFI-----------QTSSSTSAFLPAREVPANFTYRANGSFIMVNLNQ-RPLS 625

Query: 678 KLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD-SYTSSYLGKISHVE 736
             + F  CV++   V       +    R+ N+F  + ++   G D S   +Y   +  + 
Sbjct: 626 TTLRFKACVLLDKKVDNDKEEAAA---RETNVFLSIREKDKIGVDVSCRPAYCFLVPPIL 682

Query: 737 SDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGI 775
            +H+ +    F  + +C     FFF I  +   +K+CG+
Sbjct: 683 REHLLIFE--FEADVTCNEL-LFFFGIQGNEAVIKECGV 718



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 39/260 (15%)

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELK---LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           L  ++M +  ++      QP   LK   L++    + LP+      +L +L +  C +  
Sbjct: 335 LVHIDMWNSKLENLWQGNQPLGNLKRMDLRESKHLKELPNLSTA-TNLENLTLFGCSSLA 393

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP  LGNLQ L  L + G                S L+L+ CS+LE + ++I  L+S+ 
Sbjct: 394 ELPSSLGNLQKLQELRLQGC---------------STLDLQGCSKLEALPTNI-NLESLN 437

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
           +++++ C  +K FPEI   NI            L L K + ++ +PS++  +  L +LE+
Sbjct: 438 NLDLTACLLIKSFPEIS-TNIKD----------LMLMK-TAIKEVPSTIKSWSHLRNLEM 485

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
                L+  P     L+ + +L    T I+E+P  + +++ L  L LK C    ++P   
Sbjct: 486 SYNDNLKEFPHA---LDIITKLYFNDTEIQEIPLWVKKISRLQTLVLKGCKRLVTIPQ-- 540

Query: 477 YVSKSLTSLEIIDCKNFMRL 496
            +S SL+++  I+C++  RL
Sbjct: 541 -LSDSLSNVIAINCQSLERL 559


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 180/380 (47%), Gaps = 51/380 (13%)

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           +  ++ L  L +  C     +P ++  L+ L  L +    +  LPE +G+L+ L+ L L 
Sbjct: 22  EAKYQKLKWLYLSGCK-LTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLV 80

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK--- 395
           N ++L  +  SI KL        SN + L          +DG+ +  +P S+ KL+    
Sbjct: 81  N-NKLTSLPESITKL--------SNLTELY---------LDGNQLTSLPESITKLSNLTE 122

Query: 396 ----CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
                +KL SLP S+    +LTSL+ +   +L  LP+ +  L  L EL +    +  +P+
Sbjct: 123 LYLSVNKLTSLPESIGKLSNLTSLD-LGGNQLTSLPESITKLSNLTELYLGHNQLTSLPE 181

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           S+ +L+ L++L L   +   SLP  +    +LTSL+ +       LP+ I  L  L  L 
Sbjct: 182 SITKLSNLTELYLGH-NQLTSLPESITKLSNLTSLD-LSWNKLTSLPESITKLSNLTSLY 239

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    +  +PES+  LS+L  L L  N L  +PES+ +LS+L  L L  N L R+PE + 
Sbjct: 240 LGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESIT 299

Query: 571 PLSSLKYLDLFENNLDRIPE----------------YLRSFPTSIP--SEFTSLRLSVDL 612
            LS+L  LDL  N L R+PE                 L S P SI   S  TSL L    
Sbjct: 300 KLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLR--- 356

Query: 613 RNCLKLDPNELSEIIKDGWM 632
            N L + P  ++ +   GW+
Sbjct: 357 DNQLTILPESITTLSNLGWL 376



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 169/331 (51%), Gaps = 21/331 (6%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP       +LTSL +++      LP+ +  L  L  L +DG  +  LPE + +L+ L+
Sbjct: 63  SLPESIGKLSNLTSLYLVNNK-LTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLT 121

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERI 386
           +L L + ++L  +  SI KL ++ S+++   + L   PE       +    +  + +  +
Sbjct: 122 ELYL-SVNKLTSLPESIGKLSNLTSLDLG-GNQLTSLPESITKLSNLTELYLGHNQLTSL 179

Query: 387 PSSVLKLNKCS-------KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
           P S+ KL+  +       +L SLP S+    +LTSL++    KL  LP+ +  L  L  L
Sbjct: 180 PESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDL-SWNKLTSLPESITKLSNLTSL 238

Query: 440 RVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            +    +  +P+S+  L+ L+ L L   +   S+P  +    +LT L  +D     RLP+
Sbjct: 239 YLGSNQLTSLPESITTLSNLTVLDLG-SNQLTSMPESITKLSNLTEL-YLDGNQLTRLPE 296

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
            I  L  L  L ++   +  +PES+ +LS+L  L LS N L  +PES+ +LS+L SL L 
Sbjct: 297 SITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLR 356

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           +N L  +PE +  LS+L +L L  N L+  P
Sbjct: 357 DNQLTILPESITTLSNLGWLYLNNNPLENPP 387



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 211/490 (43%), Gaps = 110/490 (22%)

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
           Q L+ L L  C  LTE    +  L +LEVLDL     LTSLP SI               
Sbjct: 26  QKLKWLYLSGCK-LTEVPGDVWELEQLEVLDLG-SNELTSLPESI-------------GK 70

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L NL         ++L L+   +  LP SI  LSN+ EL +    +L ++  SI KL  L
Sbjct: 71  LSNL---------TSLYLVNNKLTSLPESITKLSNLTELYL-DGNQLTSLPESITKLSNL 120

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
                                          +EL L    +  SLP       +LTSL++
Sbjct: 121 -------------------------------TELYLS-VNKLTSLPESIGKLSNLTSLDL 148

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
                   LP+ +  L  L  L +    +  LPE + +L+ L++L L + ++L  +  SI
Sbjct: 149 -GGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGH-NQLTSLPESI 206

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-------KLESLP 403
            KL ++ S+++S                  + +  +P S+ KL+  +       +L SLP
Sbjct: 207 TKLSNLTSLDLS-----------------WNKLTSLPESITKLSNLTSLYLGSNQLTSLP 249

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
            S+    +LT L++    +L  +P+ +  L  L EL ++G  +  +P+S+ +L+ L+KL 
Sbjct: 250 ESITTLSNLTVLDL-GSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLD 308

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           L+                              RLP+ I  L  L  L +    +  +PES
Sbjct: 309 LRN-------------------------NQLTRLPESITKLSNLTKLNLSWNKLTSLPES 343

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G+LS+L  L L DN L I+PES+  LS+L  L L+NN LE  P  +      +  D F+
Sbjct: 344 IGKLSNLTSLYLRDNQLTILPESITTLSNLGWLYLNNNPLENPPIEIATKGIQEIRDYFQ 403

Query: 583 NNLDRIPEYL 592
              ++  +Y+
Sbjct: 404 QEREKGIDYI 413



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 57/306 (18%)

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKK 422
           + ++ +  + G  +  +P  V +L +        ++L SLP S+    +LTSL +++  K
Sbjct: 25  YQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVN-NK 83

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSL 482
           L  LP+ +  L  L EL ++G  +  +P+S+ +L+                       +L
Sbjct: 84  LTSLPESITKLSNLTELYLDGNQLTSLPESITKLS-----------------------NL 120

Query: 483 TSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQII 542
           T L  +       LP+ IG L  L  L + G  +  +PES+ +LS+L  L L  N L  +
Sbjct: 121 TEL-YLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSL 179

Query: 543 PESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE-----------Y 591
           PES+ +LS+L  L L +N L  +PE +  LS+L  LDL  N L  +PE           Y
Sbjct: 180 PESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLY 239

Query: 592 LRSFP-TSIPSEFTSL-RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFP 649
           L S   TS+P   T+L  L+V     L L  N+L+       M +S+   + +T+ +Y  
Sbjct: 240 LGSNQLTSLPESITTLSNLTV-----LDLGSNQLTS------MPESITKLSNLTE-LYLD 287

Query: 650 GNEIPK 655
           GN++ +
Sbjct: 288 GNQLTR 293



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 183/409 (44%), Gaps = 44/409 (10%)

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCS 122
           ++ L  L + G K+T++  DV  L  L+ +DL  S  LT LP+ +    NL  L L   +
Sbjct: 25  YQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLG-SNELTSLPESIGKLSNLTSLYL-VNN 82

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSC 180
            LT    SI  L+ L  L LD    LTSLP SI     L  L L   + L +LP+ +   
Sbjct: 83  KLTSLPESITKLSNLTELYLD-GNQLTSLPESITKLSNLTELYL-SVNKLTSLPESIGKL 140

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
              ++L L G  +  LP SI  LSN+ EL +    +L ++  SI KL  L  + +     
Sbjct: 141 SNLTSLDLGGNQLTSLPESITKLSNLTELYL-GHNQLTSLPESITKLSNLTELYLGHN-- 197

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
            Q   +P      T+     S +L   K     SLP       +LTSL  +       LP
Sbjct: 198 -QLTSLPES---ITKLSNLTSLDLSWNKLT---SLPESITKLSNLTSL-YLGSNQLTSLP 249

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           + +  L  L  L +    +  +PE + +L+ L++L L + ++L  +  SI KL ++  ++
Sbjct: 250 ESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELYL-DGNQLTRLPESITKLSNLTKLD 308

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLT 413
           + N                 + + R+P S+ KL+  +KL        SLP S+    +LT
Sbjct: 309 LRN-----------------NQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLT 351

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           SL + D  +L  LP+ +  L  L  L +    +   P  +A   + +++
Sbjct: 352 SLYLRD-NQLTILPESITTLSNLGWLYLNNNPLENPPIEIATKGIQEIR 399



 Score = 45.8 bits (107), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 49/379 (12%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVP-FTELRYFEWHQFPLKTLNILHWENLVSL 70
           P +  K++ L  L    +K   +  S+  +   TEL Y + +Q      +I    NL  L
Sbjct: 65  PESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTEL-YLDGNQLTSLPESITKLSNLTEL 123

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHS 129
            +  +K+T L + +  L +L  +DL  ++L T LP+ ++   NL  L LG+ + LT    
Sbjct: 124 YLSVNKLTSLPESIGKLSNLTSLDLGGNQL-TSLPESITKLSNLTELYLGH-NQLTSLPE 181

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLP 187
           SI  L+ L  L L   + LTSLP SI     L  L L   + L +LP+ +T     ++L 
Sbjct: 182 SITKLSNLTELYLGHNQ-LTSLPESITKLSNLTSLDL-SWNKLTSLPESITKLSNLTSLY 239

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
           L    +  LP SI  LSN+  +L     +L ++  SI KL  L  +              
Sbjct: 240 LGSNQLTSLPESITTLSNLT-VLDLGSNQLTSMPESITKLSNLTELY------------- 285

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
              +DG +    P S  KL                 +LT L++ +     RLP+ +  L 
Sbjct: 286 ---LDGNQLTRLPESITKL----------------SNLTKLDLRNN-QLTRLPESITKLS 325

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            L +L +    +  LPE +G+L+ L+ L L++ ++L  +  SI  L ++  + ++N    
Sbjct: 326 NLTKLNLSWNKLTSLPESIGKLSNLTSLYLRD-NQLTILPESITTLSNLGWLYLNNNP-- 382

Query: 368 KGFPEIPFCNIDGSGIERI 386
               E P   I   GI+ I
Sbjct: 383 ---LENPPIEIATKGIQEI 398


>gi|297826151|ref|XP_002880958.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326797|gb|EFH57217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 986

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 128/254 (50%), Gaps = 39/254 (15%)

Query: 50  EWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLS 108
            W  +P K+L +    E LV L+M  S + +LW  +Q+L +LK IDLK S  L ++P+LS
Sbjct: 569 HWKYYPRKSLPLRFQPERLVKLRMRHSNLEKLWGGIQSLPNLKIIDLKLSSELKEIPNLS 628

Query: 109 LAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
            + NLE L L YC+SL E  SSI+ L KL++L++D C  L  +PT+I+   L+RL + GC
Sbjct: 629 KSTNLEELTLEYCTSLVELPSSIKNLQKLKILNVDYCSMLQVIPTNINLASLERLDMGGC 688

Query: 169 SNLKNLPKMTSCHLRSTLPLLGVG---IEEL-PSSIKCLSNIGELLI--YSCKRL----- 217
           S L   P ++     S +  L +G   IE++ PS+  CLS +  L I   S KRL     
Sbjct: 689 SRLTTFPDIS-----SNIEFLNLGDTDIEDVPPSAAGCLSRLDHLNICSTSLKRLTHVPL 743

Query: 218 ------------ENISSSIFKLQFLESIRIHRC----------PNLQFLEMPSCNIDGTR 255
                       E I   +  L  LE + +  C          P+L+ LE  +C    + 
Sbjct: 744 FITNLVLDGSDIETIPDCVICLTRLEWLSVESCTKLESIPGLPPSLRLLEADNCVSLKSF 803

Query: 256 SKEQPSSELKLKKC 269
           S   P+  L  + C
Sbjct: 804 SFHNPTKRLSFRNC 817



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 155/332 (46%), Gaps = 67/332 (20%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCK---KLERLPDELGNLEALEELRVE 442
           P  ++KL  + S LE L   +   +SL +L+IID K   +L+ +P+ L     LEEL +E
Sbjct: 584 PERLVKLRMRHSNLEKLWGGI---QSLPNLKIIDLKLSSELKEIPN-LSKSTNLEELTLE 639

Query: 443 G-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             T + E+P S+  L  L  L +  CS  + +P+ + ++ SL  L++  C      PD  
Sbjct: 640 YCTSLVELPSSIKNLQKLKILNVDYCSMLQVIPTNINLA-SLERLDMGGCSRLTTFPDIS 698

Query: 501 GNLEYLKVLTIKGTAIREVPESL-GQLSSLEWLVLSDNNLQIIPESLNQLSS----LVSL 555
            N+E+L    +  T I +VP S  G LS L       ++L I   SL +L+     + +L
Sbjct: 699 SNIEFL---NLGDTDIEDVPPSAAGCLSRL-------DHLNICSTSLKRLTHVPLFITNL 748

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEY--------------LRSFPTSIP 600
            L  +++E IP+ +  L+ L++L +     L+ IP                L+SF    P
Sbjct: 749 VLDGSDIETIPDCVICLTRLEWLSVESCTKLESIPGLPPSLRLLEADNCVSLKSFSFHNP 808

Query: 601 SEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMY----FPGNEIPKW 656
           ++    RLS   RNC KLD      II+               KS+Y     PG +IP  
Sbjct: 809 TK----RLS--FRNCFKLDEEARRGIIQ---------------KSIYDYVCLPGKKIPAE 847

Query: 657 FRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
           F H++TG +I++    P   +    F  C+V+
Sbjct: 848 FTHKATGRSITIPLA-PGTLSASSRFKACLVI 878



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 41/192 (21%)

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C +   LP  + NLQ L  L +D                        CS L+ I ++I  
Sbjct: 641 CTSLVELPSSIKNLQKLKILNVD-----------------------YCSMLQVIPTNI-N 676

Query: 353 LKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSVL-------KLNKCSKLES 401
           L S+E +++  CS L  FP+I     F N+  + IE +P S          LN CS    
Sbjct: 677 LASLERLDMGGCSRLTTFPDISSNIEFLNLGDTDIEDVPPSAAGCLSRLDHLNICSTSLK 736

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSK 460
             + + +F  +T+L ++D   +E +PD +  L  LE L VE  T +  +P     L L  
Sbjct: 737 RLTHVPLF--ITNL-VLDGSDIETIPDCVICLTRLEWLSVESCTKLESIPGLPPSLRL-- 791

Query: 461 LKLKKCSSFESL 472
           L+   C S +S 
Sbjct: 792 LEADNCVSLKSF 803



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 109/281 (38%), Gaps = 56/281 (19%)

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           S+L +    IQ L  L+++DL     L  +P    S  L+ L L  C++L          
Sbjct: 595 SNLEKLWGGIQSLPNLKIIDLKLSSELKEIPNLSKSTNLEELTLEYCTSLV--------- 645

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                        ELPSSIK L  +  L +  C  L+ I ++I  L  LE + +  C  L
Sbjct: 646 -------------ELPSSIKNLQKLKILNVDYCSMLQVIPTNI-NLASLERLDMGGCSRL 691

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI--IDCPNFERL 299
                 S NI+           L L      +  PS       L  L I          +
Sbjct: 692 TTFPDISSNIEF----------LNLGDTDIEDVPPSAAGCLSRLDHLNICSTSLKRLTHV 741

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P  + NL      ++DG+ I  +P+ +  L  L  L +++C++LE I      L+ +E+ 
Sbjct: 742 PLFITNL------VLDGSDIETIPDCVICLTRLEWLSVESCTKLESIPGLPPSLRLLEA- 794

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
              NC +LK F    F N         P+  L    C KL+
Sbjct: 795 --DNCVSLKSF---SFHN---------PTKRLSFRNCFKLD 821


>gi|296080997|emb|CBI18501.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 15/260 (5%)

Query: 42  PFTELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL 100
           P  ELRY  WH +PL+ L +  + E+LV L M  S + QLW++   L  L  I L  S+ 
Sbjct: 16  PSYELRYLYWHGYPLEYLPSSFNAEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQH 75

Query: 101 LTKLPDLSL-AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
           L ++PD+S+ A NLE L    CSSL E H SI  LNKL +L+L  CK L   P  I+ K 
Sbjct: 76  LIEIPDISISAPNLEKLIFDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIINMKA 135

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRL 217
           L+ L   GCS LK  P +   ++ + L L    + IEELPSSI  L+ +  L +  CK L
Sbjct: 136 LQILNFSGCSGLKKFPNIQG-NMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNL 194

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQ-FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           +++ +SI KL+ LE + +  C  L+ F EM   N+D  +       EL L   P  E LP
Sbjct: 195 KSLPTSICKLKSLEYLFLSGCSKLESFPEMME-NMDNLK-------ELLLDGTPI-EVLP 245

Query: 277 SGQCMFKSLTSLEIIDCPNF 296
           S     K L  L +  C N 
Sbjct: 246 SSIERLKVLILLNLRKCKNL 265



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 28/194 (14%)

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
            +PD   +   L +LI DG +++ E+   +G+L  L  L LKNC +L      I  +K++
Sbjct: 78  EIPDISISAPNLEKLIFDGCSSLLEVHPSIGKLNKLILLNLKNCKKL-VCFPCIINMKAL 136

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGS------------GIERIPSSV--------LKLNKC 396
           + +  S CS LK FP     NI G+             IE +PSS+        L L  C
Sbjct: 137 QILNFSGCSGLKKFP-----NIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWC 191

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
             L+SLP+S+C  KSL  L +  C KLE  P+ + N++ L+EL ++GT I  +P S+ +L
Sbjct: 192 KNLKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERL 251

Query: 457 -ALSKLKLKKCSSF 469
             L  L L+KC + 
Sbjct: 252 KVLILLNLRKCKNL 265



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 15/133 (11%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            K+L  L    C   ++ P+  GN++ L  L +   AI ELP  +G L  L  L+LK C 
Sbjct: 133 MKALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCK 192

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSV---- 390
            L+ + +SI KLKS+E + +S CS L+ FPE       +    +DG+ IE +PSS+    
Sbjct: 193 NLKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLK 252

Query: 391 ----LKLNKCSKL 399
               L L KC  L
Sbjct: 253 VLILLNLRKCKNL 265



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
           C KL   P  + M K+L  L    C  L++ P+  GN+E L +L +    I E+P S+  
Sbjct: 121 CKKLVCFPCIINM-KALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGH 179

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L LK C + +SLP+ +   KSL  L +  C      P+ + N++ LK L + GT
Sbjct: 180 LTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGT 239

Query: 515 AIREVPESLGQLSSL 529
            I  +P S+ +L  L
Sbjct: 240 PIEVLPSSIERLKVL 254



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 22/258 (8%)

Query: 370 FP--EIPFCNIDGSGIERIPSS-----VLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCK 421
           FP  E+ +    G  +E +PSS     +++L+ C S L+ L  +  + + L ++ +   +
Sbjct: 15  FPSYELRYLYWHGYPLEYLPSSFNAEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQ 74

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKK-CSSFESLPSRLYVS 479
            L  +PD   +   LE+L  +G + + EV  S+ +L    L   K C      P  + + 
Sbjct: 75  HLIEIPDISISAPNLEKLIFDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIINM- 133

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NN 538
           K+L  L    C    + P+  GN+E L  L +   AI E+P S+G L+ L  L L    N
Sbjct: 134 KALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKN 193

Query: 539 LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
           L+ +P S+ +L SL  L LS  + LE  PE ++ + +LK     E  LD  P  +   P+
Sbjct: 194 LKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLK-----ELLLDGTP--IEVLPS 246

Query: 598 SIPSEFTSLRLSVDLRNC 615
           SI  E   + + ++LR C
Sbjct: 247 SI--ERLKVLILLNLRKC 262


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 13/267 (4%)

Query: 335  LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS------ 388
            L++K C      S  + +      I I       G P    C   GS +  +P       
Sbjct: 876  LKVKECGVRLIYSQDLQQSHEDADIRICRACQRDGTPRRKCC-FKGSDMNEVPIIENPLE 934

Query: 389  -SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
               L L  C  L SLPSS+  FKSL +L    C +LE  P+ L ++E+L +L + GT I+
Sbjct: 935  LDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIK 994

Query: 448  EVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            E+P S+ +L  L  L L+ C +  +LP  +    S  +L +  C NF +LPD +G L+ L
Sbjct: 995  EIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSL 1054

Query: 507  KVLTIK--GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            + L +    +   ++P SL  L SL  L L   NL+  P  +  LSSLV+L L  N+  R
Sbjct: 1055 EYLFVGHLDSMNFQLP-SLSGLCSLRTLKLQGCNLREFPSEIYYLSSLVTLSLGGNHFSR 1113

Query: 565  IPERLDPLSSLKYLDLFE-NNLDRIPE 590
            IP+ +  L +L+ L L     L  IPE
Sbjct: 1114 IPDGISQLYNLENLYLGHCKMLQHIPE 1140



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 130/305 (42%), Gaps = 56/305 (18%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +L L  C  LE LP  +  +K L +L    C KLER P+  G++  L  L + GT I ++
Sbjct: 481 ILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDL 540

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P S+  L                         L +L + +C    ++P+ I +L  LK L
Sbjct: 541 PSSITHL-----------------------NGLQTLLLQECLKLHQIPNHICHLSSLKEL 577

Query: 510 TIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            +    I E  +P  +  LSSL+ L L   +   IP ++NQLS L  L LS+ NNLE+IP
Sbjct: 578 DLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 637

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           E   P S L+ LD   +N            TS  + F  L     L NC           
Sbjct: 638 EL--P-SRLRLLDAHGSN-----------RTSSRALFLPLH---SLVNCFSW-------- 672

Query: 627 IKDGWMKQSVNGETYITKS--MYFPGNE-IPKWFRHQSTGSTISLKTPQPTGY-NKLMGF 682
              G  + S +  +Y  K   +  P  + IP+W   ++       + PQ     N+ +GF
Sbjct: 673 -AQGLKRTSFSDSSYRGKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGF 731

Query: 683 AFCVV 687
           A C V
Sbjct: 732 ALCCV 736



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 109/250 (43%), Gaps = 19/250 (7%)

Query: 233  IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE-------LKLKKCPRPESLPSGQCMFKSL 285
            IRI R           C   G+   E P  E       L L+ C    SLPS    FKSL
Sbjct: 900  IRICRACQRDGTPRRKCCFKGSDMNEVPIIENPLELDSLCLRDCRNLTSLPSSIFGFKSL 959

Query: 286  TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             +L    C   E  P+ L ++++L +L ++GTAI+E+P  + +L  L  L L+NC  L  
Sbjct: 960  ATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVN 1019

Query: 346  ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPS 404
            +  SI  L S +++ +S C N    P+          + R+ S   L +     +     
Sbjct: 1020 LPESICNLTSFKTLVVSRCPNFNKLPD---------NLGRLQSLEYLFVGHLDSMNFQLP 1070

Query: 405  SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            SL    SL +L++  C  L   P E+  L +L  L + G     +P  ++QL  L  L L
Sbjct: 1071 SLSGLCSLRTLKLQGC-NLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYL 1129

Query: 464  KKCSSFESLP 473
              C   + +P
Sbjct: 1130 GHCKMLQHIP 1139



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 15/236 (6%)

Query: 136  KLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGI 193
            +L+ L L  C++LTSLP+SI   K L  L   GCS L++ P+ +        L L G  I
Sbjct: 934  ELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAI 993

Query: 194  EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +E+PSSI+ L  +  LL+ +CK L N+  SI  L   +++ + RCPN  F ++P  N+  
Sbjct: 994  KEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPN--FNKLPD-NLGR 1050

Query: 254  TRSKEQP-SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             +S E      L       P    SG C   SL +L++  C N    P E+  L +L  L
Sbjct: 1051 LQSLEYLFVGHLDSMNFQLPS--LSGLC---SLRTLKLQGC-NLREFPSEIYYLSSLVTL 1104

Query: 313  IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI---SSSIFKLKSVESIEISNCS 365
             + G     +P+G+ QL  L  L L +C  L++I    S +F L +     + N S
Sbjct: 1105 SLGGNHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLENLS 1160



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 10/166 (6%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   E LP G   +K L +L    C   ER P+  G+++ L  L + GTAI +LP
Sbjct: 482 LTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLP 541

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
             +  L  L  L L+ C +L  I + I  L S++ +++ +C+ ++G      C++     
Sbjct: 542 SSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHL----- 596

Query: 384 ERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
               SS+ KLN +     S+P+++     L  L +  C  LE++P+
Sbjct: 597 ----SSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPE 638



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 38/264 (14%)

Query: 14  TFSKMTELRLLKFCGSKNKCMV--HSLEGVPFT--ELRYFEWHQFPLKTLNI-LHWENLV 68
           +F +M  LRLLK    + K  +  H      F   EL Y  W  +PL++L +  H +NLV
Sbjct: 387 SFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNFHAKNLV 446

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ-----NLEILDLGY--- 120
            L +  S + Q+W   + L+      L +S   + +P+L +       NLE+L  G    
Sbjct: 447 ELSLRDSNIKQVWRGNKVLL------LLFSYNFSSVPNLEILTLEGCVNLELLPRGIYKW 500

Query: 121 ----------CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCS 169
                     CS L         + +L VLDL    ++  LP+SI H   L+ L+L+ C 
Sbjct: 501 KHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSG-TAIMDLPSSITHLNGLQTLLLQECL 559

Query: 170 NLKNLPKMTSCHLRS--TLPLLGVGIEE--LPSSIKCLSNIGELLIYSCKRLENISSSIF 225
            L  +P    CHL S   L L    I E  +PS I  LS++ +L +       +I ++I 
Sbjct: 560 KLHQIPNHI-CHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQ-GHFSSIPTTIN 617

Query: 226 KLQFLESIRIHRCPNL-QFLEMPS 248
           +L  LE + +  C NL Q  E+PS
Sbjct: 618 QLSRLEVLNLSHCNNLEQIPELPS 641



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 30/155 (19%)

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPKMTS- 179
            +++ E  SSIQ L  L+ L L  CK+L +LP SI +    K LV+  C N   LP     
Sbjct: 991  TAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGR 1050

Query: 180  -------------------------CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSC 214
                                     C LR TL L G  + E PS I  LS++  L +   
Sbjct: 1051 LQSLEYLFVGHLDSMNFQLPSLSGLCSLR-TLKLQGCNLREFPSEIYYLSSLVTLSL-GG 1108

Query: 215  KRLENISSSIFKLQFLESIRIHRCPNLQFL-EMPS 248
                 I   I +L  LE++ +  C  LQ + E+PS
Sbjct: 1109 NHFSRIPDGISQLYNLENLYLGHCKMLQHIPELPS 1143


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           N ++LPDEL  L+ L  L +      EL  GL +L  L  L L  C+ L  + +++ KL 
Sbjct: 34  NLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAGCN-LATVPAAVMKLP 92

Query: 355 SVESIEISNCSN------LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------S 401
            +E++ +SN  N      + G   +   ++D   ++ +P  VLKL+    L+       S
Sbjct: 93  QLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLSHLRSLDLSGNEQIS 152

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
           LP  LC  +++  L +  C  +  +P  +  L  LE+L + G     +P  L++L   ++
Sbjct: 153 LPDELCRLENIKELRLYACF-MATVPPAVLKLTQLEKLNLSGNWGIHLPDGLSRLTNIRV 211

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLE----IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
            +   +  +++PS   V+  LT LE     ++      LP ++G+L  +K L +    + 
Sbjct: 212 LILLGTGMDTVPS---VAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQLH 268

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +P  +G+L+ LEWL LS N LQ +P  + QL+ +  L LS   L  +P  +  L+ L+ 
Sbjct: 269 TLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLER 328

Query: 578 LDLFENNLDRIP 589
           LDL  N +  +P
Sbjct: 329 LDLRNNPIQTLP 340



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 186/434 (42%), Gaps = 75/434 (17%)

Query: 215 KRLENISSSIFKLQFLESIRIHR------------CPNLQFLEMPSCNIDGTRSKEQPSS 262
           K L+ +   +F+L+ LE++ + R              NL+ L +  CN+        P++
Sbjct: 33  KNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAGCNLATV-----PAA 87

Query: 263 ELKLKKCPRPESL----------PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
            +KL   P+ E+L          P       +LT++ +  C N + LP  +  L  L  L
Sbjct: 88  VMKL---PQLETLILSNNENITLPDDMSGLVNLTAIHLDWC-NLDSLPPVVLKLSHLRSL 143

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC------SN 366
            + G     LP+ L +L  + +L L  C  +  +  ++ KL  +E + +S          
Sbjct: 144 DLSGNEQISLPDELCRLENIKELRLYACF-MATVPPAVLKLTQLEKLNLSGNWGIHLPDG 202

Query: 367 LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL---------ESLPSSLCMFKSLTSLEI 417
           L     I    + G+G++ +PS   +L +  +L          +LP+ +    ++  L +
Sbjct: 203 LSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHL 262

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
             C+ L  LP E+G L  LE L +    ++ +P  + QL  +  L L  C          
Sbjct: 263 SHCQ-LHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYC---------- 311

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
                              LP E+G L  L+ L ++   I+ +P  +GQL++++ L LS 
Sbjct: 312 ---------------QLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSH 356

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP-EYLRSF 595
             L  +P  + +L+ L  L LS+N L+ +P  +  L+++ YL +  N L + P E  R  
Sbjct: 357 CQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPPSEVCRQG 416

Query: 596 PTSIPSEFTSLRLS 609
            ++I   F  L  S
Sbjct: 417 ISAIRRYFDELERS 430



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 51/432 (11%)

Query: 57  KTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           K  +I+    L++L++    + QL D++  L  L+ +DL  +  +     L    NL++L
Sbjct: 15  KEWDIMGKMTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLL 74

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP 175
            L  C +L    +++  L +LE L L   +++T LP  +     L  + L  C NL +LP
Sbjct: 75  SLAGC-NLATVPAAVMKLPQLETLILSNNENIT-LPDDMSGLVNLTAIHLDWC-NLDSLP 131

Query: 176 KMT--SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            +     HLRS L L G     LP  +  L NI EL +Y+C  +  +  ++ KL  LE +
Sbjct: 132 PVVLKLSHLRS-LDLSGNEQISLPDELCRLENIKELRLYAC-FMATVPPAVLKLTQLEKL 189

Query: 234 R------IH------RCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR---------P 272
                  IH      R  N++ L +    +D       PS   +L +  R          
Sbjct: 190 NLSGNWGIHLPDGLSRLTNIRVLILLGTGMDTV-----PSVAWRLTQLERLYLSLNPLQT 244

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
            +LP+      ++  L +  C     LP E+G L  L  L +    ++ LP  +GQL  +
Sbjct: 245 STLPAKVGHLTNIKHLHLSHC-QLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKV 303

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
             L+L  C +L  +   + +L  +E +++ N + ++  P      ++   +  I    LK
Sbjct: 304 KHLDLSYC-QLHTLPPEVGRLTQLERLDLRN-NPIQTLP------VEVGQLTNIKH--LK 353

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIID--CKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L+ C +L +LP  +     LT LE +D     L+ LP E+G L  +  L V G  + + P
Sbjct: 354 LSHC-QLHTLPPEV---GRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPP 409

Query: 451 KSLAQLALSKLK 462
             + +  +S ++
Sbjct: 410 SEVCRQGISAIR 421


>gi|238478956|ref|NP_001154444.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196040|gb|AEE34161.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 988

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 158/343 (46%), Gaps = 39/343 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT-----ELRYFEWHQFPLKTLN- 60
           E+ I    F +M+ LR L    SK+    + +  +P        LR  +W  +P K    
Sbjct: 510 EVYIREGAFRRMSNLRFLTVYKSKDDG--NDIMDIPKRMEFPRRLRILKWEAYPNKCFPP 567

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             H E LV L M  SK+  LW   Q L +LK ++LK S  L  LP+LS A  +EIL L  
Sbjct: 568 KFHPEYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSD 627

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SS  +L +LE L L  C SL  +P  ++ ++L  L +RGCS L+N+P M+  
Sbjct: 628 CKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSRLRNIPVMS-- 685

Query: 181 HLRSTLPLLGV---GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE--SIRI 235
              + L  L +    +E++ +SI    ++  L I S  +L  ++     ++FL+     I
Sbjct: 686 ---TRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGI 742

Query: 236 HRCPNL---QFLEMPSCNIDGTRS----KEQPSSELKLKKCPRPESLPSGQCMFKS---- 284
            R PN    ++L + S  I G R      E P+S LK       ESL +  C FK+    
Sbjct: 743 ERIPNCIKDRYL-LKSLTISGCRRLTSLPELPAS-LKFLVADDCESLETVFCPFKTSKCW 800

Query: 285 -LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI---RELP 323
                E  +C       D+      + R    GT +   RE+P
Sbjct: 801 PFNIFEFTNCFKL----DQEARRAIIQRPFFHGTTLLPGREVP 839



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 75/346 (21%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L +KN S+LEY+      LK+++ + +   SNLK  P +     + + +E     +L
Sbjct: 574 LVELVMKN-SKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLS----NATKME-----IL 623

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           KL+ C  L  +PSS    + L  L +  C  LE +P ++ NLE L +L + G        
Sbjct: 624 KLSDCKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM-NLEFLYDLDMRG-------- 674

Query: 452 SLAQLALSKLKLKKCSSFESLP---SRLY-VSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
                         CS   ++P   +RLY ++ S T++E +           I +  ++ 
Sbjct: 675 --------------CSRLRNIPVMSTRLYFLNISETAVEDVSAS--------ITSWHHVT 712

Query: 508 VLTIKGTAIREVPESLGQLSSL----EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNL 562
            L+I  +A       L  L+ L    E+L LS + ++ IP  +     L SL +S    L
Sbjct: 713 HLSINSSA------KLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLLKSLTISGCRRL 766

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
             +PE   P +SLK+  L  ++ + +      F TS    F     +    NC KLD   
Sbjct: 767 TSLPEL--P-ASLKF--LVADDCESLETVFCPFKTSKCWPFNIFEFT----NCFKLDQEA 817

Query: 623 LSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
              II+            +   +   PG E+P  F H+  G+T+++
Sbjct: 818 RRAIIQ----------RPFFHGTTLLPGREVPAEFDHRGRGNTLTI 853



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 24/220 (10%)

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGL 326
           K  + E L  G    K+L  + +    N + LP+ L N   +  L + D  ++ E+P   
Sbjct: 580 KNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPN-LSNATKMEILKLSDCKSLVEIPSSF 638

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSG 382
             L  L KL L+ C  LE I + +  L+ +  +++  CS L+  P     + F NI  + 
Sbjct: 639 SHLQRLEKLRLRGCISLEVIPADM-NLEFLYDLDMRGCSRLRNIPVMSTRLYFLNISETA 697

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL----EIIDC--KKLERLPDELGNLEAL 436
           +E + +S+   +  + L S+ SS    + LT L    E +D     +ER+P+ + +   L
Sbjct: 698 VEDVSASITSWHHVTHL-SINSS-AKLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLL 755

Query: 437 EELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
           + L + G    T + E+P SL  L         C S E++
Sbjct: 756 KSLTISGCRRLTSLPELPASLKFLVAD-----DCESLETV 790


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 43/325 (13%)

Query: 282 FKSLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            + L +L+++D        LP E+G LQ L  L +    +   P+ +G+L  L  L L +
Sbjct: 39  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-S 97

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++++ I   I KL+ ++S+ + N + L   P+       + + N+  + I+ +P  + K
Sbjct: 98  ANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEK 156

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   + L SL + D  +L  LP E+G L+ L+ L +    
Sbjct: 157 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQ 215

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
           +  +P+ +  L             ++L     VS  LT++           P EIG L+ 
Sbjct: 216 LTTLPQEIGHL-------------QNLQDLYLVSNQLTTI-----------PKEIGQLQN 251

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L++L +    +  +P+ +G+L +L+WL LS+N L  IP+ + QL +L  L LSNN L  I
Sbjct: 252 LQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTI 311

Query: 566 PERLDPLSSLKYLDLFENNLDRIPE 590
           P+ +  L +L+ L L  N L  IP+
Sbjct: 312 PKEIGQLQNLQELYLSNNQLITIPK 336



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 8/142 (5%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EI  L+ L++L +    I  +P+ + QL +L+ L L  N L I+P+ + +L +L  L
Sbjct: 12  LPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL 71

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
            LSNN L   P+ +  L  L++L+L  N +  IP+ +         +  SL L     N 
Sbjct: 72  YLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKL-----QKLQSLYLP---NNQ 123

Query: 616 LKLDPNELSEIIKDGWMKQSVN 637
           L   P E+ ++ K  W+  S N
Sbjct: 124 LTTLPQEIGKLQKLQWLNLSYN 145



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/383 (21%), Positives = 161/383 (42%), Gaps = 63/383 (16%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
           +++ L +L+ +DL  ++++    ++   +NL++LDL   + LT     I  L  L+ L L
Sbjct: 15  EIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDL-RSNQLTILPKEIGKLQNLQELYL 73

Query: 143 DRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIK 201
              + LT+ P  I      + +    + +K +PK +       +L L    +  LP  I 
Sbjct: 74  SNNQ-LTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG 132

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS 261
            L  + + L  S  +++ +   I KLQ L+ + +H+    Q   +P              
Sbjct: 133 KLQKL-QWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN---QLTTLPQ------------- 175

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
              +++K  + ESL               +D      LP E+G LQ L  L ++   +  
Sbjct: 176 ---EIEKLQKLESLG--------------LDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 218

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP+ +G         L+N  +L  +S+ +  +      EI    NL+        ++  +
Sbjct: 219 LPQEIG--------HLQNLQDLYLVSNQLTTIPK----EIGQLQNLQ------MLDLGNN 260

Query: 382 GIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
            +  +P  + KL          ++L ++P  +   ++L  L  +   +L  +P E+G L+
Sbjct: 261 QLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQEL-YLSNNQLTTIPKEIGQLQ 319

Query: 435 ALEELRVEGTGIREVPKSLAQLA 457
            L+EL +    +  +PK + QL 
Sbjct: 320 NLQELYLSNNQLITIPKEIGQLQ 342



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 17/131 (12%)

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
           L LSDN L I+P+ + QL +L  L LS+N +  +P+ +  L +L+ LDL  N L  +P+ 
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKE 61

Query: 592 LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK------- 644
           +             L LS    N L   P E+ ++ K  W+  S N    I K       
Sbjct: 62  IGKL-----QNLQELYLS---NNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQK 113

Query: 645 --SMYFPGNEI 653
             S+Y P N++
Sbjct: 114 LQSLYLPNNQL 124


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 35/332 (10%)

Query: 46  LRYFEWHQFPLKTLNILHW--ENLVSLKMPGSKVTQLWDD--VQNLVSLKRIDLKYSKLL 101
           LR  +W  +P  +L   H+  + LV L +  S     + +  +    SLK + +   + L
Sbjct: 587 LRVLKWFDYPESSLPA-HYNPKKLVILDLSDSTGLFTFGNQMIMKFKSLKEMKISKCQSL 645

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
            K+PD+S A NL+ L L  C SL E H SI +L KLE L+L+ C SLT LP  I+   LK
Sbjct: 646 KKVPDMSGAPNLKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGINLPSLK 705

Query: 162 RLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
            + LR C+ +KN P+ +        L L    I ELP SI  L  +  L I  C +L  +
Sbjct: 706 TMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLEL 765

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS--- 277
            SSIF L  LE++  + C  L                    + +K +K   PE+LPS   
Sbjct: 766 PSSIFMLPKLETLEAYCCRGL--------------------ARIKKRKGQVPETLPSDVR 805

Query: 278 --GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
               C+      L     P +E L   L  L  +  + +D ++I  LP  +     L KL
Sbjct: 806 NASSCLVHRDVDLSFCYLP-YEFLATLLPFLHYVTNISLDYSSITILPSSINACYSLMKL 864

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            + NC+EL  I      +K + +I   NC +L
Sbjct: 865 TMNNCTELREIRGLPPNIKHLGAI---NCESL 893



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 171/413 (41%), Gaps = 71/413 (17%)

Query: 350 IFKLKSVESIEISNCSNLK------GFPEIPFCNIDG-SGIERIPSSV--------LKLN 394
           I K KS++ ++IS C +LK      G P +   ++D    +  +  S+        L LN
Sbjct: 628 IMKFKSLKEMKISKCQSLKKVPDMSGAPNLKKLHLDSCKSLVEVHDSIGFLEKLEDLNLN 687

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
            C+ L  LP  + +  SL ++ + +C  ++  P+ LG +E ++ L +  + I E+P S+ 
Sbjct: 688 YCTSLTILPYGINL-PSLKTMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIG 746

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            L  L  L + +C+    LPS +++   L +LE   C+   R+               KG
Sbjct: 747 LLVGLVNLTIDRCNKLLELPSSIFMLPKLETLEAYCCRGLARIKKR------------KG 794

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNL-------QIIPESLNQLSSLVSLKLSNNNLERIP 566
                +P  +   SS   LV  D +L       + +   L  L  + ++ L  +++  +P
Sbjct: 795 QVPETLPSDVRNASSC--LVHRDVDLSFCYLPYEFLATLLPFLHYVTNISLDYSSITILP 852

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
             ++   SL  L +  NN   + E +R  P +I          +   NC  L       +
Sbjct: 853 SSINACYSLMKLTM--NNCTELRE-IRGLPPNIKH--------LGAINCESLTSQSKEML 901

Query: 627 IKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCV 686
           +    +   +       K + +PG+ IP WF  ++   + S         NKL   A C+
Sbjct: 902 LNQMLLNSGI-------KYIIYPGSSIPSWFHQRTCEQSQSFWFR-----NKLPEMALCL 949

Query: 687 VVACSVSECCRHESVEDDRKCNLFDVVCDRRSEG----YDSYTSSYLGKISHV 735
           V    V   C   +  D+    +FD++ DR  +     Y  ++ + L   +H+
Sbjct: 950 V---GVLGSCDFTARSDEY---IFDLIIDRNQQSNHIFYVRWSENNLFDTNHI 996



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 390 VLKLNKCSKLESLPSSLCM-FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
           +L L+  + L +  + + M FKSL  ++I  C+ L+++PD  G                 
Sbjct: 611 ILDLSDSTGLFTFGNQMIMKFKSLKEMKISKCQSLKKVPDMSG----------------- 653

Query: 449 VPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P       L KL L  C S   +   +   + L  L +  C +   LP  I NL  LK 
Sbjct: 654 APN------LKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGI-NLPSLKT 706

Query: 509 LTIKG-TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
           ++++  T ++  PE LG++ ++++LVLS++ +  +P S+  L  LV+L +   N L  +P
Sbjct: 707 MSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELP 766

Query: 567 ERLDPLSSLKYLDLF-ENNLDRIPEYLRSFPTSIPSEFTS-----LRLSVDLRNC 615
             +  L  L+ L+ +    L RI +     P ++PS+  +     +   VDL  C
Sbjct: 767 SSIFMLPKLETLEAYCCRGLARIKKRKGQVPETLPSDVRNASSCLVHRDVDLSFC 821


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 153/334 (45%), Gaps = 47/334 (14%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENL-VSLKM 72
             SKM+ LRLL F   K   +++S+  +   +L++ EW+ +P   L      NL V L +
Sbjct: 555 ALSKMSNLRLLIFRDVKFMGILNSVNCLS-NKLQFLEWYNYPFSYLPSSFQPNLLVELIL 613

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
             S + QLW  +++L +L+ +DL YSK L + PD     NLE + L  C++L   H S+ 
Sbjct: 614 QHSNIKQLWKGIKHLPNLRALDLSYSKNLIEAPDFGGVLNLEWIILEGCTNLARIHPSVG 673

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
            L KL  L+L  C SL SLP++I S     L   G  N+   PK+ S        LL   
Sbjct: 674 LLRKLAFLNLKNCISLVSLPSNILS-----LSSLGYLNISGCPKVFSNQ------LLEKP 722

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           I E  S +  +         +  + ++ SSSIFK          R  NL F         
Sbjct: 723 IHEEHSKMPDIRQ-------TAMQFQSTSSSIFK----------RLINLTF--------- 756

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             RS            C  P SLP+  CM      L++  C N  ++PD +G++ +L  L
Sbjct: 757 --RSSYYSRGYRNSAGCLLP-SLPTFFCM----RDLDLSFC-NLSQIPDAIGSMHSLETL 808

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            + G     LP  + QL+ L  L L++C +L Y 
Sbjct: 809 NLGGNNFVSLPYSINQLSKLVHLNLEHCKQLRYF 842



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 181/426 (42%), Gaps = 59/426 (13%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELG-NLQALNRLIIDGTAIRELPEGLGQLALLS 333
           L S  C+   L  LE  + P F  LP     NL  L  LI+  + I++L +G+  L  L 
Sbjct: 576 LNSVNCLSNKLQFLEWYNYP-FSYLPSSFQPNL--LVELILQHSNIKQLWKGIKHLPNLR 632

Query: 334 KLELKNCSELEYISSSIFK-LKSVESIEISNCSNL-KGFPEIPFCNIDGSGIERIPSSVL 391
            L+L     L  I +  F  + ++E I +  C+NL +  P +        G+ R   + L
Sbjct: 633 ALDLSYSKNL--IEAPDFGGVLNLEWIILEGCTNLARIHPSV--------GLLR-KLAFL 681

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
            L  C  L SLPS++    SL  L I  C K+    ++L   + + E   +   IR+   
Sbjct: 682 NLKNCISLVSLPSNILSLSSLGYLNISGCPKV--FSNQLLE-KPIHEEHSKMPDIRQTAM 738

Query: 452 SLAQLALSKLK----LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
                + S  K    L   SS+ S   R      L SL    C               ++
Sbjct: 739 QFQSTSSSIFKRLINLTFRSSYYSRGYRNSAGCLLPSLPTFFC---------------MR 783

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIP 566
            L +    + ++P+++G + SLE L L  NN   +P S+NQLS LV L L +   L   P
Sbjct: 784 DLDLSFCNLSQIPDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQLRYFP 843

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           E   P S     + +  N    P  L  F  + P         VD+  C  +    + +I
Sbjct: 844 EMPSPTSLPVIRETY--NFAHYPRGL--FIFNCPK-------IVDIARCWGMTFAWMIQI 892

Query: 627 IKDGWMKQSVNGETYITK-SMYFPGNEIPKWFRHQSTGSTISLKTPQPTGY-NKLMGFAF 684
                ++ S   +T I    +  PGN+IPKWF +QS G++ISL  P P  + N  +G A 
Sbjct: 893 -----LQVSQESDTRIGWIDIVVPGNQIPKWFNNQSVGTSISLD-PSPIMHGNHWIGIAC 946

Query: 685 CVVVAC 690
           CVV   
Sbjct: 947 CVVFVA 952


>gi|238478954|ref|NP_001154443.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196039|gb|AEE34160.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1004

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 158/343 (46%), Gaps = 39/343 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT-----ELRYFEWHQFPLKTLN- 60
           E+ I    F +M+ LR L    SK+    + +  +P        LR  +W  +P K    
Sbjct: 510 EVYIREGAFRRMSNLRFLTVYKSKDDG--NDIMDIPKRMEFPRRLRILKWEAYPNKCFPP 567

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             H E LV L M  SK+  LW   Q L +LK ++LK S  L  LP+LS A  +EIL L  
Sbjct: 568 KFHPEYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSD 627

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SS  +L +LE L L  C SL  +P  ++ ++L  L +RGCS L+N+P M+  
Sbjct: 628 CKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSRLRNIPVMS-- 685

Query: 181 HLRSTLPLLGV---GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE--SIRI 235
              + L  L +    +E++ +SI    ++  L I S  +L  ++     ++FL+     I
Sbjct: 686 ---TRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGI 742

Query: 236 HRCPNL---QFLEMPSCNIDGTRS----KEQPSSELKLKKCPRPESLPSGQCMFKS---- 284
            R PN    ++L + S  I G R      E P+S LK       ESL +  C FK+    
Sbjct: 743 ERIPNCIKDRYL-LKSLTISGCRRLTSLPELPAS-LKFLVADDCESLETVFCPFKTSKCW 800

Query: 285 -LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI---RELP 323
                E  +C       D+      + R    GT +   RE+P
Sbjct: 801 PFNIFEFTNCFKL----DQEARRAIIQRPFFHGTTLLPGREVP 839



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 75/346 (21%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L +KN S+LEY+      LK+++ + +   SNLK  P +     + + +E     +L
Sbjct: 574 LVELVMKN-SKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLS----NATKME-----IL 623

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           KL+ C  L  +PSS    + L  L +  C  LE +P ++ NLE L +L + G        
Sbjct: 624 KLSDCKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM-NLEFLYDLDMRG-------- 674

Query: 452 SLAQLALSKLKLKKCSSFESLP---SRLY-VSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
                         CS   ++P   +RLY ++ S T++E +           I +  ++ 
Sbjct: 675 --------------CSRLRNIPVMSTRLYFLNISETAVEDVSAS--------ITSWHHVT 712

Query: 508 VLTIKGTAIREVPESLGQLSSL----EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNL 562
            L+I  +A       L  L+ L    E+L LS + ++ IP  +     L SL +S    L
Sbjct: 713 HLSINSSA------KLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLLKSLTISGCRRL 766

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
             +PE   P +SLK+  L  ++ + +      F TS    F     +    NC KLD   
Sbjct: 767 TSLPEL--P-ASLKF--LVADDCESLETVFCPFKTSKCWPFNIFEFT----NCFKLDQEA 817

Query: 623 LSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISL 668
              II+            +   +   PG E+P  F H+  G+T+++
Sbjct: 818 RRAIIQ----------RPFFHGTTLLPGREVPAEFDHRGRGNTLTI 853



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 24/220 (10%)

Query: 268 KCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGL 326
           K  + E L  G    K+L  + +    N + LP+ L N   +  L + D  ++ E+P   
Sbjct: 580 KNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPN-LSNATKMEILKLSDCKSLVEIPSSF 638

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSG 382
             L  L KL L+ C  LE I + +  L+ +  +++  CS L+  P     + F NI  + 
Sbjct: 639 SHLQRLEKLRLRGCISLEVIPADM-NLEFLYDLDMRGCSRLRNIPVMSTRLYFLNISETA 697

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL----EIIDC--KKLERLPDELGNLEAL 436
           +E + +S+   +  + L S+ SS    + LT L    E +D     +ER+P+ + +   L
Sbjct: 698 VEDVSASITSWHHVTHL-SINSS-AKLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLL 755

Query: 437 EELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
           + L + G    T + E+P SL  L         C S E++
Sbjct: 756 KSLTISGCRRLTSLPELPASLKFLVAD-----DCESLETV 790


>gi|326516606|dbj|BAJ92458.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 876

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 154/308 (50%), Gaps = 28/308 (9%)

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCP---RPE----SLPSGQCMFKSLTSLEIIDC 293
           L+ L++  C+I      E PS+  +LK+      PE      P        L  L +   
Sbjct: 563 LRVLDLSRCSI-----TEFPSTVGQLKQLEVLIAPELQDRQFPDSITRLSRLHYLNLNGS 617

Query: 294 PNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
                +P  +  L++L  L +   T+++ +P+ LG L  L  L+L  C +LE +  S+  
Sbjct: 618 REISAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGS 677

Query: 353 LKSVESIEISNCSNLKGFPEI--PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
           L++++++++S C  LK  PE      N+D           L L+ C KLESLP SL   K
Sbjct: 678 LENIQTLDLSVCDELKSLPECLGSLNNLD----------TLDLSGCRKLESLPKSLGSLK 727

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE-VPKSLAQLA-LSKLKLKKCSS 468
           +L +L++  C KLE LP+ LG+L+ L+ + +      E +P+SL  L  L  L L  C  
Sbjct: 728 TLQTLDLSGCGKLESLPESLGSLKTLQRMHLFACHKLEFLPESLGGLKNLQTLDLSHCDK 787

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLS 527
            ESLP  L   ++L + ++  C     LP+ +G L+ L+ L +     ++++PESL  L 
Sbjct: 788 LESLPESLGSLQNLYTFDLSSCFELKSLPESLGGLKNLQTLDLTFCHRLKDLPESLESLK 847

Query: 528 SLEWLVLS 535
           +L+ L LS
Sbjct: 848 NLQTLNLS 855



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 167/340 (49%), Gaps = 33/340 (9%)

Query: 107 LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVL 165
            S  + L +LDL  CS +TE  S++  L +LEVL     +     P SI     L  L L
Sbjct: 557 FSFPKCLRVLDLSRCS-ITEFPSTVGQLKQLEVLIAPELQD-RQFPDSITRLSRLHYLNL 614

Query: 166 RGCSNLKNLPKMTSCHLRSTLPLL---GVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
            G   +  +P   S  L S + L       ++ +P S+  L+N+  L +  C++LE++  
Sbjct: 615 NGSREISAIPSSVS-KLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPE 673

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSC-----NIDGTRSKEQPSSELKLKKCPRPESLPS 277
           S+  L+ ++++ +  C  L+   +P C     N+D           L L  C + ESLP 
Sbjct: 674 SLGSLENIQTLDLSVCDELK--SLPECLGSLNNLD----------TLDLSGCRKLESLPK 721

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLE 336
                K+L +L++  C   E LP+ LG+L+ L R+ +     +  LPE LG L  L  L+
Sbjct: 722 SLGSLKTLQTLDLSGCGKLESLPESLGSLKTLQRMHLFACHKLEFLPESLGGLKNLQTLD 781

Query: 337 LKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           L +C +LE +  S+  L+++ + ++S+C  LK  PE         G++ + +  L L  C
Sbjct: 782 LSHCDKLESLPESLGSLQNLYTFDLSSCFELKSLPE------SLGGLKNLQT--LDLTFC 833

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
            +L+ LP SL   K+L +L +  C +L+ LP    NL+ +
Sbjct: 834 HRLKDLPESLESLKNLQTLNLSGCYRLKSLPKGPENLKII 873



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 39/327 (11%)

Query: 53  QFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQ 111
           +FP     +   E L++   P  +  Q  D +  L  L  ++L  S+ ++ +P  +S  +
Sbjct: 575 EFPSTVGQLKQLEVLIA---PELQDRQFPDSITRLSRLHYLNLNGSREISAIPSSVSKLE 631

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSN 170
           +L  L L YC+S+     S+  LN L  LDL  C+ L SLP S+ S + ++ L L  C  
Sbjct: 632 SLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQTLDLSVCDE 691

Query: 171 LKNLPK-MTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           LK+LP+ + S +   TL L G   +E LP S+  L  +  L +  C +LE++  S+  L+
Sbjct: 692 LKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSLK 751

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            L+ + +  C  L+FL                           PESL       K+L +L
Sbjct: 752 TLQRMHLFACHKLEFL---------------------------PESLGG----LKNLQTL 780

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKNCSELEYIS 347
           ++  C   E LP+ LG+LQ L    +     ++ LPE LG L  L  L+L  C  L+ + 
Sbjct: 781 DLSHCDKLESLPESLGSLQNLYTFDLSSCFELKSLPESLGGLKNLQTLDLTFCHRLKDLP 840

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIP 374
            S+  LK+++++ +S C  LK  P+ P
Sbjct: 841 ESLESLKNLQTLNLSGCYRLKSLPKGP 867



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 171/377 (45%), Gaps = 73/377 (19%)

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
           L VLDL RC S+T  P+++               LK L  + +  L+           + 
Sbjct: 563 LRVLDLSRC-SITEFPSTV-------------GQLKQLEVLIAPELQD---------RQF 599

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS 256
           P SI  LS +  L +   + +  I SS+ KL+ L  + +  C +++ +            
Sbjct: 600 PDSITRLSRLHYLNLNGSREISAIPSSVSKLESLVHLYLAYCTSVKVI------------ 647

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG---NLQALNRLI 313
                          P+SL S      +L +L++  C   E LP+ LG   N+Q L+  +
Sbjct: 648 ---------------PDSLGS----LNNLRTLDLSGCQKLESLPESLGSLENIQTLDLSV 688

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
            D   ++ LPE LG L  L  L+L  C +LE +  S+  LK+++++++S C  L+  PE 
Sbjct: 689 CD--ELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPES 746

Query: 374 PFCNIDGS--GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
                 GS   ++R     + L  C KLE LP SL   K+L +L++  C KLE LP+ LG
Sbjct: 747 L-----GSLKTLQR-----MHLFACHKLEFLPESLGGLKNLQTLDLSHCDKLESLPESLG 796

Query: 432 NLEALEELRVEGT-GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           +L+ L    +     ++ +P+SL  L  L  L L  C   + LP  L   K+L +L +  
Sbjct: 797 SLQNLYTFDLSSCFELKSLPESLGGLKNLQTLDLTFCHRLKDLPESLESLKNLQTLNLSG 856

Query: 490 CKNFMRLPDEIGNLEYL 506
           C     LP    NL+ +
Sbjct: 857 CYRLKSLPKGPENLKII 873



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 13/244 (5%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALL 332
           ++PS     +SL  L +  C + + +PD LG+L  L  L + G   +  LPE LG L  +
Sbjct: 622 AIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENI 681

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVL 391
             L+L  C EL+ +   +  L +++++++S C  L+  P+          +  + +   L
Sbjct: 682 QTLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLESLPK---------SLGSLKTLQTL 732

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
            L+ C KLESLP SL   K+L  + +  C KLE LP+ LG L+ L+ L +     +  +P
Sbjct: 733 DLSGCGKLESLPESLGSLKTLQRMHLFACHKLEFLPESLGGLKNLQTLDLSHCDKLESLP 792

Query: 451 KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           +SL  L  L    L  C   +SLP  L   K+L +L++  C     LP+ + +L+ L+ L
Sbjct: 793 ESLGSLQNLYTFDLSSCFELKSLPESLGGLKNLQTLDLTFCHRLKDLPESLESLKNLQTL 852

Query: 510 TIKG 513
            + G
Sbjct: 853 NLSG 856



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 38/269 (14%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SV 390
           L  L+L  CS  E+  S++ +LK +E +      + + FP+          I R+     
Sbjct: 563 LRVLDLSRCSITEF-PSTVGQLKQLEVLIAPELQD-RQFPD---------SITRLSRLHY 611

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L LN   ++ ++PSS+   +SL  L +  C  ++ +PD LG+L  L  L + G       
Sbjct: 612 LNLNGSREISAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSG------- 664

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          C   ESLP  L   +++ +L++  C     LP+ +G+L  L  L 
Sbjct: 665 ---------------CQKLESLPESLGSLENIQTLDLSVCDELKSLPECLGSLNNLDTLD 709

Query: 511 IKG-TAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKL-SNNNLERIPE 567
           + G   +  +P+SLG L +L+ L LS    L+ +PESL  L +L  + L + + LE +PE
Sbjct: 710 LSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSLKTLQRMHLFACHKLEFLPE 769

Query: 568 RLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
            L  L +L+ LDL   + L+ +PE L S 
Sbjct: 770 SLGGLKNLQTLDLSHCDKLESLPESLGSL 798



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 12/252 (4%)

Query: 65  ENLVSLKMPG-SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCS 122
           E+LV L +   + V  + D + +L +L+ +DL   + L  LP+ L   +N++ LDL  C 
Sbjct: 631 ESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQTLDLSVCD 690

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSC 180
            L      +  LN L+ LDL  C+ L SLP S+ S K L+ L L GC  L++LP+ + S 
Sbjct: 691 ELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSL 750

Query: 181 HLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                + L     +E LP S+  L N+  L +  C +LE++  S+  LQ L +  +  C 
Sbjct: 751 KTLQRMHLFACHKLEFLPESLGGLKNLQTLDLSHCDKLESLPESLGSLQNLYTFDLSSCF 810

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
            L+   +P  ++ G ++ +     L L  C R + LP      K+L +L +  C   + L
Sbjct: 811 ELK--SLPE-SLGGLKNLQT----LDLTFCHRLKDLPESLESLKNLQTLNLSGCYRLKSL 863

Query: 300 PDELGNLQALNR 311
           P    NL+ + R
Sbjct: 864 PKGPENLKIIGR 875



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 38/239 (15%)

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-------TGIREVPKSLAQLALS 459
           C + SLT+  I D  K  ++         L +LRV          G    PK L  L LS
Sbjct: 515 CRYASLTNYNISDYNKASKMSTIF-----LPKLRVMHFLDCGFHGGAFSFPKCLRVLDLS 569

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIRE 518
           +  +   + F S   +L   + L + E+ D     + PD I  L  L  L + G+  I  
Sbjct: 570 RCSI---TEFPSTVGQLKQLEVLIAPELQD----RQFPDSITRLSRLHYLNLNGSREISA 622

Query: 519 VPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLK 576
           +P S+ +L SL  L L+   ++++IP+SL  L++L +L LS    LE +PE L  L +++
Sbjct: 623 IPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQ 682

Query: 577 YLDLFE-NNLDRIPEYLRSFPT-------------SIPSEFTSLRL--SVDLRNCLKLD 619
            LDL   + L  +PE L S                S+P    SL+   ++DL  C KL+
Sbjct: 683 TLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLE 741


>gi|357468483|ref|XP_003604526.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505581|gb|AES86723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 983

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 128/252 (50%), Gaps = 14/252 (5%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMV---HSLEGVPFTELRYFEWHQFPLKTLN- 60
           N +++++P+ F KMT L+ L F G  +  +      LE  P T LRY  W  +PLK+ + 
Sbjct: 362 NRKLKLSPHVFDKMTNLQFLDFWGYFDDYLDLFPQGLESFP-TGLRYLHWIDYPLKSFSE 420

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQ-NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
               ENLV L +   ++ +LW  VQ NLV+LK + +  +  L +LPD S A NL++L + 
Sbjct: 421 KFFAENLVILDLYLGRMEKLWCGVQQNLVNLKEVTIICASFLKELPDFSKATNLKVLSVT 480

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C +L   H SI  L KL  LDL  C SLT+  ++ +   L  L L  C  L       S
Sbjct: 481 ACDNLESVHPSIFTLEKLVHLDLSSCVSLTTFTSNSNLSSLHYLDLSNCLKLSEF----S 536

Query: 180 CHLRST--LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
             L +   L L G  I  LPSS  C SN+ E L  S   +E+I SSI  L  L  + I  
Sbjct: 537 VTLENIVELDLSGCPINALPSSFGCQSNL-ETLNLSDTEIESIHSSIKNLTRLRKLYIRF 595

Query: 238 CPNLQFL-EMPS 248
              L  L E+PS
Sbjct: 596 SNKLLVLPELPS 607



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 155/359 (43%), Gaps = 53/359 (14%)

Query: 411 SLTSLEIIDCKKLERLPD--ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS 467
           +L  + II    L+ LPD  +  NL+ L     +   +  V  S+  L  L  L L  C 
Sbjct: 450 NLKEVTIICASFLKELPDFSKATNLKVLSVTACDN--LESVHPSIFTLEKLVHLDLSSCV 507

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
           S  +  S    + +L+SL  +D  N ++L +    LE +  L + G  I  +P S G  S
Sbjct: 508 SLTTFTS----NSNLSSLHYLDLSNCLKLSEFSVTLENIVELDLSGCPINALPSSFGCQS 563

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLD 586
           +LE L LSD  ++ I  S+  L+ L  L +  +N L  +PE    + S     L  +N +
Sbjct: 564 NLETLNLSDTEIESIHSSIKNLTRLRKLYIRFSNKLLVLPELPSSVES-----LLVDNCE 618

Query: 587 RIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDP-------------------NELSEII 627
            +   L  FP+++  +F   +  V+  NC  LD                      LS + 
Sbjct: 619 SLKTVL--FPSTVAEQFKENKKRVEFWNCFNLDELSLINIGLNLQINLMKFTHQHLSTLE 676

Query: 628 KDGWMKQSV----NGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFA 683
            D + +  V    N ++Y    +Y PG+ +PKW  +++T   + +        + L+GF 
Sbjct: 677 HDEYAESYVDYKDNFDSYQAVYVY-PGSSVPKWLEYKTTMDGMIVDLSPLHL-SPLLGFV 734

Query: 684 FCVVVACSVSECCRHESVEDDRKCNL--FDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
           FC ++  +   C + E       CN+   DV  D   +G++ YT   L  +    SDHV
Sbjct: 735 FCFILPETKEYCKKVE-------CNITAIDVEGDGEKDGFNIYTD--LKHVYKTPSDHV 784


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 27/321 (8%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L +   ++  LP+ +GQL
Sbjct: 149 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 208

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L +L L N  +L  +   I +L++++ +++S  ++L   P+      +   +E +   
Sbjct: 209 ENLQRLNL-NSQKLTTLPKEIGQLRNLQELDLS-FNSLTTLPK------EVGQLENLQRL 260

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            L  N+ +   +LP  +   K+L  L++ +  KL  LP E+  L  L+EL +    +  +
Sbjct: 261 DLHQNRLA---TLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 316

Query: 450 PKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
           PK + QL  L  L L   +   +LP  +   ++L +L ++D +    LP EIG L+ L++
Sbjct: 317 PKEIGQLQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQ-LTTLPKEIGELQNLEI 374

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L ++   I  +P+ +GQL +L+ L L  N L  +P+ + QL +L  L L  N L  +P+ 
Sbjct: 375 LVLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 434

Query: 569 LDPLSSLKYLDLFENNLDRIP 589
           ++ L +L+ LDL  N L  +P
Sbjct: 435 IEQLQNLRVLDLDNNQLTTLP 455



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 243/520 (46%), Gaps = 79/520 (15%)

Query: 80  LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEV 139
           L   +QN + ++ + L   KL T   ++   QNL++LDLG+ + LT     I  L  L+ 
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH-NQLTALPKEIGQLRNLQE 98

Query: 140 LDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
           LDL    SLT+LP  +   + L+RL L       N  K+T+                LP 
Sbjct: 99  LDLS-FNSLTTLPKEVGQLENLQRLNL-------NSQKLTT----------------LPK 134

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKE 258
            I  L N+ EL + S   L  +   + +L+           NLQ L     N++  +   
Sbjct: 135 EIGQLRNLQELDL-SFNSLTTLPKEVGQLE-----------NLQRL-----NLNSQKLTT 177

Query: 259 QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA 318
            P      K+  +  +L      F SLT+L           P E+G L+ L RL ++   
Sbjct: 178 LP------KEIGQLRNLQELDLSFNSLTTL-----------PKEVGQLENLQRLNLNSQK 220

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           +  LP+ +GQL  L +L+L + + L  +   + +L++++ +++   + L   P      +
Sbjct: 221 LTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLDLHQ-NRLATLP------M 272

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           +   ++ +    L LN  +KL +LP  +   ++L  L++    +L  LP E+G L+ L+ 
Sbjct: 273 EIGQLKNLQE--LDLN-SNKLTTLPKEIRQLRNLQELDL-HRNQLTTLPKEIGQLQNLKT 328

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMR 495
           L +  T +  +PK + +L  L  L L   +   +LP  +     L +LEI+  +      
Sbjct: 329 LNLIVTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPKEI---GELQNLEILVLRENRITA 384

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L+ L +    +  +P+ +GQL +L+ L L +N L  +P+ + QL +L  L
Sbjct: 385 LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVL 444

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            L NN L  +P+ +  L +L+ L L EN L   P+ +R  
Sbjct: 445 DLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 484



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 236/516 (45%), Gaps = 85/516 (16%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  L +  +++T L  ++  L +L+ +DL ++ L T   ++   +NL+ L+L  
Sbjct: 67  IKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLN- 125

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS 179
              LT     I  L  L+ LDL    SLT+LP  +   + L+RL L       N  K+T+
Sbjct: 126 SQKLTTLPKEIGQLRNLQELDLS-FNSLTTLPKEVGQLENLQRLNL-------NSQKLTT 177

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                           LP  I  L N+ EL + S   L  +   + +L+           
Sbjct: 178 ----------------LPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLE----------- 209

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           NLQ L     N++  +    P      K+  +  +L      F SLT+           L
Sbjct: 210 NLQRL-----NLNSQKLTTLP------KEIGQLRNLQELDLSFNSLTT-----------L 247

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G L+ L RL +    +  LP  +GQL  L +L+L N ++L  +   I +L++++ +
Sbjct: 248 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQEL 306

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
           ++   + L   P+      +   ++ + +  L     ++L +LP  +   ++L +L ++D
Sbjct: 307 DLHR-NQLTTLPK------EIGQLQNLKTLNL---IVTQLTTLPKEIGELQNLKTLNLLD 356

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYV 478
             +L  LP E+G L+ LE L +    I  +PK + QL  L +L L + +   +LP  +  
Sbjct: 357 -NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQ-NQLTTLPKEIGQ 414

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
            ++L  L  +D      LP EI  L+ L+VL +    +  +P+ +GQL +L+ L L +N 
Sbjct: 415 LQNLQEL-CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQ 473

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
           L   P+ + QL +L  L L           L+PLSS
Sbjct: 474 LTTFPKEIRQLKNLQELHLY----------LNPLSS 499



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 218/504 (43%), Gaps = 82/504 (16%)

Query: 35  VHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRID 94
           +  L+ +   +L + +    P +   I    NL  L +  + +T L  +V  L +L+R++
Sbjct: 67  IKQLQNLKLLDLGHNQLTALPKE---IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLN 123

Query: 95  LKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTS 154
           L   KL T   ++   +NL+ LDL + +SLT     +  L  L+ L+L+  K LT+LP  
Sbjct: 124 LNSQKLTTLPKEIGQLRNLQELDLSF-NSLTTLPKEVGQLENLQRLNLNSQK-LTTLPKE 181

Query: 155 IHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIY 212
           I   + L+ L L   ++L  LPK +        L L    +  LP  I  L N+ EL + 
Sbjct: 182 IGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDL- 239

Query: 213 SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           S   L  +   + +L+ L+ + +H+                                 R 
Sbjct: 240 SFNSLTTLPKEVGQLENLQRLDLHQN--------------------------------RL 267

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
            +LP      K+L  L+ ++      LP E+  L+ L  L +    +  LP+ +GQL  L
Sbjct: 268 ATLPMEIGQLKNLQELD-LNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNL 326

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
             L L   ++L  +   I +L++++++ + + + L   P+      +   ++ +   VL+
Sbjct: 327 KTLNLI-VTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPK------EIGELQNLEILVLR 378

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            N+ +   +LP  +   ++L  L+ +   +L  LP E+G L+ L+EL ++   +  +PK 
Sbjct: 379 ENRIT---ALPKEIGQLQNLQRLD-LHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 434

Query: 453 LAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLT 510
           + QL                           +L ++D  N     LP EIG L+ L+ L 
Sbjct: 435 IEQLQ--------------------------NLRVLDLDNNQLTTLPKEIGQLQNLQELC 468

Query: 511 IKGTAIREVPESLGQLSSLEWLVL 534
           +    +   P+ + QL +L+ L L
Sbjct: 469 LDENQLTTFPKEIRQLKNLQELHL 492



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
           I+  +    LP EI  L+ LK+L +    +  +P+ +GQL +L+ L LS N+L  +P+ +
Sbjct: 54  ILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEV 113

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP---------- 596
            QL +L  L L++  L  +P+ +  L +L+ LDL  N+L  +P+ +              
Sbjct: 114 GQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 173

Query: 597 --TSIPSEFTSLR 607
             T++P E   LR
Sbjct: 174 KLTTLPKEIGQLR 186


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 224/502 (44%), Gaps = 45/502 (8%)

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--KYLKRLVLRGCS 169
           +LE LD+   + L+    +I  L KL  LD D    L SLP +I S  K     V R  +
Sbjct: 37  DLEFLDVSN-NKLSSIPEAIGRLQKLYRLDAD-GNMLKSLPQAIGSLQKLTHLYVYR--N 92

Query: 170 NLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
            L NLP  +      + L +    + ++P  +  L ++ E+L  S  +L      + KLQ
Sbjct: 93  KLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSL-EVLDASNNKLSTFPPGVEKLQ 151

Query: 229 FLESIRIHR------------CPNLQFLEMPSCNID----GTRSKEQPSSELKLKKCPRP 272
            L  + I               PNL+ L++ +  +     G + K Q   EL++      
Sbjct: 152 KLRELGIDGNQLTEVPPGVFLLPNLEVLDVSNNKLSTFPPGVK-KLQKLRELRINDNQLT 210

Query: 273 ESLPSGQCMFKSLTSLEI--IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
           E +P G C   SL +LE+  +D  N    P  +  LQ L  L I+   + E+P G+  L 
Sbjct: 211 E-VPPGVC---SLPNLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLP 266

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV 390
            L  L + N ++L      + KL+ +  + I          E+P      SG+  +P+  
Sbjct: 267 NLEALGVGN-NKLSTFPPGVEKLQKLRVLHIYGNQ----LTEVP------SGVCSLPNLE 315

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L     +KL + P  +   + L  L I D  +L  +P  + +L  LE L V    IR +P
Sbjct: 316 LLHVGKNKLSTFPPGVEKLQKLRELHIND-NQLTEVPSGVCSLPNLELLNVSNNPIRRLP 374

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKV 508
             + +L   K     C  F+  P ++   K+L  L       + F  +PDE+GNL++L  
Sbjct: 375 NDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNLQHLWY 434

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L ++   +R +P ++ +L +L  + L +N     PE L +L ++  L +SNNN+ R+P  
Sbjct: 435 LALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNNITRLPTA 494

Query: 569 LDPLSSLKYLDLFENNLDRIPE 590
           L     LK LD+  N L   P+
Sbjct: 495 LHRADKLKDLDVSGNPLTYPPQ 516



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 183/448 (40%), Gaps = 78/448 (17%)

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
           G  ++ LP +I  L  +  L +Y  K L N+   I KLQ L  + I              
Sbjct: 68  GNMLKSLPQAIGSLQKLTHLYVYRNK-LANLPPGIEKLQKLTLLSI-------------- 112

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQ 307
             D   +K                 +P G CM   L SLE++D  N      P  +  LQ
Sbjct: 113 -FDNQLTK-----------------VPPGVCM---LPSLEVLDASNNKLSTFPPGVEKLQ 151

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS-- 365
            L  L IDG  + E+P G+  L  L  L++ N ++L      + KL+ +  + I++    
Sbjct: 152 KLRELGIDGNQLTEVPPGVFLLPNLEVLDVSN-NKLSTFPPGVKKLQKLRELRINDNQLT 210

Query: 366 ----NLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTS 414
                +   P +   N+D + +   P  V KL K        ++L  +PS +C   +L +
Sbjct: 211 EVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNLEA 270

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK---SLAQLALSKLKLKKCSSFES 471
           L + +  KL   P  +  L+ L  L + G  + EVP    SL  L L  +   K S+F  
Sbjct: 271 LGVGN-NKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLSTFPP 329

Query: 472 LPSRLYVSK-----------------SLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIK 512
              +L   +                 SL +LE+++  N    RLP+++  L  LK L + 
Sbjct: 330 GVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLDVH 389

Query: 513 GTAIREVPESLGQLSSLEWLVLSDN---NLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
                E P  + QL +LE L    +      ++P+ +  L  L  L L NN L  +P  +
Sbjct: 390 CCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENNLLRTLPSTM 449

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFPT 597
             L +L+ + L+ N  D  PE L   P 
Sbjct: 450 SRLHNLREVHLWNNKFDTFPEVLCELPA 477



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 48/320 (15%)

Query: 284 SLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            +T LE +D  N     +P+ +G LQ L RL  DG  ++ LP+ +G L  L+ L +   +
Sbjct: 34  DITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQAIGSLQKLTHLYVYR-N 92

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
           +L  +   I KL+ +  + I             F N                    +L  
Sbjct: 93  KLANLPPGIEKLQKLTLLSI-------------FDN--------------------QLTK 119

Query: 402 LPSSLCMFKSLTSLEIIDC--KKLERLPDELGNLEALEELRVEGTGIREVPKS---LAQL 456
           +P  +CM   L SLE++D    KL   P  +  L+ L EL ++G  + EVP     L  L
Sbjct: 120 VPPGVCM---LPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNL 176

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
            +  +   K S+F   P  +   + L  L I D +    +P  + +L  L+VL +    +
Sbjct: 177 EVLDVSNNKLSTF---PPGVKKLQKLRELRINDNQ-LTEVPPGVCSLPNLEVLNVDNNNL 232

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
              P  + +L  L  L ++DN L  +P  +  L +L +L + NN L   P  ++ L  L+
Sbjct: 233 SAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLR 292

Query: 577 YLDLFENNLDRIPEYLRSFP 596
            L ++ N L  +P  + S P
Sbjct: 293 VLHIYGNQLTEVPSGVCSLP 312



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 199/478 (41%), Gaps = 62/478 (12%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           V+ L  L+ + +  ++L    P + L  NLE+LD+   + L+     ++ L KL  L ++
Sbjct: 147 VEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSN-NKLSTFPPGVKKLQKLRELRIN 205

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE-----ELPS 198
               LT +P  + S     ++    +NL   P      +     L G+GI      E+PS
Sbjct: 206 D-NQLTEVPPGVCSLPNLEVLNVDNNNLSAFPP----GVEKLQKLRGLGINDNQLTEVPS 260

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS--CNIDGTRS 256
            +  L N+ E L     +L      + KLQ L  + I+     Q  E+PS  C++     
Sbjct: 261 GVCSLPNL-EALGVGNNKLSTFPPGVEKLQKLRVLHIYGN---QLTEVPSGVCSL----- 311

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG 316
              P+ EL      +  + P G    + L  L I D      +P  + +L  L  L +  
Sbjct: 312 ---PNLELLHVGKNKLSTFPPGVEKLQKLRELHINDN-QLTEVPSGVCSLPNLELLNVSN 367

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-- 374
             IR LP  + +L  L  L++ +C + +     + +LK++E +        K F  +P  
Sbjct: 368 NPIRRLPNDVTRLTRLKNLDV-HCCQFDEFPRQVLQLKTLEKLYAGQSVGRK-FDMVPDE 425

Query: 375 --------FCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIID 419
                   +  ++ + +  +PS++ +L+         +K ++ P  LC   ++  L+I +
Sbjct: 426 VGNLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISN 485

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSL------AQLALSKLKLKKCSSFESLP 473
              + RLP  L   + L++L V G  +   P+ +      A +A  K + +K        
Sbjct: 486 -NNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQEAEKDERILRAF 544

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           +RL    S T         +  L   +G L    V  IK +A  +VP+ + Q + ++W
Sbjct: 545 NRLSARMSQTQ--------WKPLARSLG-LSNRAVDAIKASAPDDVPDQVYQ-TLVQW 592



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 53/99 (53%)

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
           ++   +P+E+ ++  L+ L +    +  +PE++G+L  L  L    N L+ +P+++  L 
Sbjct: 23  QDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQAIGSLQ 82

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            L  L +  N L  +P  ++ L  L  L +F+N L ++P
Sbjct: 83  KLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVP 121


>gi|222619836|gb|EEE55968.1| hypothetical protein OsJ_04697 [Oryza sativa Japonica Group]
          Length = 1710

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 156/317 (49%), Gaps = 22/317 (6%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LPSSI+ L  +G L + S   + ++  S   LQ ++S+ +  C     LE+   NI    
Sbjct: 606 LPSSIRRLMLLGYLDV-SGFPIISLPKSFHTLQNMQSLILSNCS----LEILPANIGSL- 659

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
              Q    L L +      LPS       L  L +  C   E LP+ + NL+ L  L I 
Sbjct: 660 ---QKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDIS 716

Query: 316 GT-AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           G  A+++LP   G LA LS + L +CS+L  +  S+  L+S+E + +S+C  L+  PE  
Sbjct: 717 GCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSL-NLESLEHLILSDCHELEQLPE-- 773

Query: 375 FCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
               D   + R+   VL ++ C +++ LP + C  K L  L + DC  L +LP+  G+L 
Sbjct: 774 ----DLGNLYRL--EVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECFGDLS 827

Query: 435 ALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
            L+ L +   + ++ +P SL  +  L  L L  C S ESLPS L   + L  L++  C N
Sbjct: 828 ELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLTGCYN 886

Query: 493 FMRLPDEIGNLEYLKVL 509
              LPD I N+  L +L
Sbjct: 887 MHGLPDSISNMSSLTLL 903



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 192/434 (44%), Gaps = 70/434 (16%)

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           P+   LP  +  L  L  L + G  I  LP+    L  +  L L NCS LE + ++I  L
Sbjct: 601 PSNPVLPSSIRRLMLLGYLDVSGFPIISLPKSFHTLQNMQSLILSNCS-LEILPANIGSL 659

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
           + +  +++S  SNL   P         S  + +    L L+ C+KLE LP S+   K L 
Sbjct: 660 QKLCYLDLSRNSNLNKLPS--------SVTDLVELYFLNLSGCAKLEELPESINNLKCLQ 711

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L+I  C  L++LP + G                    SLA+L+   + L  CS    LP
Sbjct: 712 HLDISGCCALQKLPGKFG--------------------SLAKLSF--VNLSSCSKLTKLP 749

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWL 532
             L + +SL  L + DC    +LP+++GNL  L+VL +     ++ +P++  QL  L++L
Sbjct: 750 DSLNL-ESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYL 808

Query: 533 VLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            LSD + L  +PE    LS L SL L++ + L+ +P  L  + +LK+L+L          
Sbjct: 809 NLSDCHGLIQLPECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNL---------S 859

Query: 591 YLRSFPTSIPSEFTSLRLSV-DLRNCLKLD--PNELSEIIKDGWMKQSVNGETYITKSMY 647
           Y  S   S+PS    LRL V DL  C  +   P+ +S +     +  +   E    K+  
Sbjct: 860 YCVSL-ESLPSSLGDLRLQVLDLTGCYNMHGLPDSISNMSSLTLLNTATGSECVFHKTQI 918

Query: 648 FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSEC----CRH----E 699
                     +H +   T+          +++    F  +V      C     RH    E
Sbjct: 919 IK--------KHLNLPGTVEHDV------HEIENADFSSIVELGRLRCRELEVRHLENVE 964

Query: 700 SVEDDRKCNLFDVV 713
            +ED RK NL D+V
Sbjct: 965 RLEDARKANLRDMV 978



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 173/373 (46%), Gaps = 65/373 (17%)

Query: 103 KLPDLSLAQN--LEILDLGYCSSLTETH-------SSIQYLNKLEVLDLDRCKSLTSLPT 153
           +LP  + +Q   + ILDL   S+  ++        SSI+ L  L  LD+     + SLP 
Sbjct: 573 QLPRKAFSQTSYIRILDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGF-PIISLPK 631

Query: 154 SIHS-KYLKRLVLRGCS------NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           S H+ + ++ L+L  CS      N+ +L K+  C+L  +       + +LPSS+  L  +
Sbjct: 632 SFHTLQNMQSLILSNCSLEILPANIGSLQKL--CYLDLSR---NSNLNKLPSSVTDLVEL 686

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
             L +  C +LE +  SI  L+ L+ + I  C  LQ                        
Sbjct: 687 YFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQ------------------------ 722

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAIRELPEG 325
                   LP        L+ + +  C    +LPD L NL++L  LI+ D   + +LPE 
Sbjct: 723 -------KLPGKFGSLAKLSFVNLSSCSKLTKLPDSL-NLESLEHLILSDCHELEQLPED 774

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIER 385
           LG L  L  L++ +C  ++ +  +  +LK ++ + +S+C    G  ++P C  D S ++ 
Sbjct: 775 LGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC---HGLIQLPECFGDLSELQS 831

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
                L L  CSKL+SLP SLC   +L  L +  C  LE LP  LG+L  L+ L + G  
Sbjct: 832 -----LNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLTGCY 885

Query: 445 GIREVPKSLAQLA 457
            +  +P S++ ++
Sbjct: 886 NMHGLPDSISNMS 898



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 32/280 (11%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           S + +L   V +LV L  ++L     L +LP+ ++  + L+ LD+  C +L +       
Sbjct: 671 SNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPGKFGS 730

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
           L KL  ++L  C  LT LP S++ + L+ L+L  C  L                      
Sbjct: 731 LAKLSFVNLSSCSKLTKLPDSLNLESLEHLILSDCHEL---------------------- 768

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
           E+LP  +  L  +  L +  C R++ +  +  +L+ L+ + +  C  L  +++P C   G
Sbjct: 769 EQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGL--IQLPECF--G 824

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
             S+ Q    L L  C + +SLP   C   +L  L +  C + E LP  LG+L+ L  L 
Sbjct: 825 DLSELQ---SLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLD 880

Query: 314 IDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           + G   +  LP+ +  ++ L+ L     SE  +  + I K
Sbjct: 881 LTGCYNMHGLPDSISNMSSLTLLNTATGSECVFHKTQIIK 920



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 180/438 (41%), Gaps = 73/438 (16%)

Query: 87   LVSLKRIDLKYSKLLTKLP----DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
            L  LK ++L     L +LP    DLS    L+ L+L  CS L     S+  +  L+ L+L
Sbjct: 802  LKHLKYLNLSDCHGLIQLPECFGDLS---ELQSLNLTSCSKLQSLPWSLCNMFNLKHLNL 858

Query: 143  DRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE-------- 194
              C SL SLP+S+    L+ L L GC N+  LP   S     TL     G E        
Sbjct: 859  SYCVSLESLPSSLGDLRLQVLDLTGCYNMHGLPDSISNMSSLTLLNTATGSECVFHKTQI 918

Query: 195  -----ELPSSIKC---------LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
                  LP +++           S+I EL    C+ LE     +  L+ +E +   R  N
Sbjct: 919  IKKHLNLPGTVEHDVHEIENADFSSIVELGRLRCRELE-----VRHLENVERLEDARKAN 973

Query: 241  LQ-FLEMP----SCNIDGTRSKEQPSSELKLKKCPR---------------PESLPSGQC 280
            L+  +E+     S  + GTRS ++    L+    PR               P  L     
Sbjct: 974  LRDMVELRWLKFSWELGGTRSVDKDKLVLENLIPPRTLEEFLLDGYMCKDFPSWLTGISS 1033

Query: 281  MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGL----GQLALLSKL 335
                L  + I +    + LP   G L  L    ++   +IR + +      G    L  +
Sbjct: 1034 YLPYLMCIRICNLATCDSLP-AFGQLPNLRHFRMNNMPSIRRIGKEFYGEEGNCKKLRVI 1092

Query: 336  ELKNCSELEYISSSI-------FKLKSVESIEISNCSNLKGFPEIPFC---NIDGSGIER 385
             L+  + LE   ++        F + ++  +++ NC  L   P  P      +D S  E 
Sbjct: 1093 WLERMTNLEEWWTTRSGKEDEEFLIPNLHVLKVDNCPKLSFLPYPPRSMNWYLDSSD-EL 1151

Query: 386  IPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG- 443
             P+  +L+L     LE LP  L    SL  + II+C KL  LP  L NL AL ELR++G 
Sbjct: 1152 APALRILELGFWEDLEMLPEWLGQHVSLEYITIINCPKLTSLPKSLLNLTALRELRLKGC 1211

Query: 444  TGIREVPKSLAQLALSKL 461
             G+  +P+ L  L  +K+
Sbjct: 1212 EGLETLPEWLRLLRTAKV 1229



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 200/516 (38%), Gaps = 109/516 (21%)

Query: 86   NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC 145
            +L  L  ++L     LTKLPD    ++LE L L  C  L +    +  L +LEVLD+  C
Sbjct: 730  SLAKLSFVNLSSCSKLTKLPDSLNLESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDC 789

Query: 146  KSLTSLPTSI-HSKYLKRLVLRGCSNLKNLPK-------MTSCHLRSTLPLLGVGIEELP 197
              +  LP +    K+LK L L  C  L  LP+       + S +L S   L     + LP
Sbjct: 790  YRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECFGDLSELQSLNLTSCSKL-----QSLP 844

Query: 198  SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL-----EMPSCNID 252
             S+  + N+  L +  C  LE++ SS+  L+ L+ + +  C N+  L      M S  + 
Sbjct: 845  WSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLTGCYNMHGLPDSISNMSSLTLL 903

Query: 253  GTRSKEQ---PSSELKLKKCPRPESLPSG-----QCMFKSLTSLEIIDC--------PNF 296
             T +  +     +++  K    P ++           F S+  L  + C         N 
Sbjct: 904  NTATGSECVFHKTQIIKKHLNLPGTVEHDVHEIENADFSSIVELGRLRCRELEVRHLENV 963

Query: 297  ERLPD-------------------ELGNLQALNRLIIDGTAIREL--PEGLGQLALLSKL 335
            ERL D                   ELG  +++++   D   +  L  P  L +  L   +
Sbjct: 964  ERLEDARKANLRDMVELRWLKFSWELGGTRSVDK---DKLVLENLIPPRTLEEFLLDGYM 1020

Query: 336  ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS------- 388
                 S L  ISS +  L  +    ++ C +L  F ++P  N+    +  +PS       
Sbjct: 1021 CKDFPSWLTGISSYLPYLMCIRICNLATCDSLPAFGQLP--NLRHFRMNNMPSIRRIGKE 1078

Query: 389  -----------SVLKLNKCSKLESLPSSLC-------MFKSLTSLEIIDCKKLERLP--- 427
                        V+ L + + LE   ++         +  +L  L++ +C KL  LP   
Sbjct: 1079 FYGEEGNCKKLRVIWLERMTNLEEWWTTRSGKEDEEFLIPNLHVLKVDNCPKLSFLPYPP 1138

Query: 428  ----------DELGNLEALEELRVEGTGIRE----VPKSLAQ-LALSKLKLKKCSSFESL 472
                      DEL        LR+   G  E    +P+ L Q ++L  + +  C    SL
Sbjct: 1139 RSMNWYLDSSDELA-----PALRILELGFWEDLEMLPEWLGQHVSLEYITIINCPKLTSL 1193

Query: 473  PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKV 508
            P  L    +L  L +  C+    LP+ +  L   KV
Sbjct: 1194 PKSLLNLTALRELRLKGCEGLETLPEWLRLLRTAKV 1229


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 163/311 (52%), Gaps = 17/311 (5%)

Query: 282 FKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            K L +L+++D  +     LP E+G L+ L  L +   ++  LP+ +GQL  L +L L N
Sbjct: 67  IKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL-N 125

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
             +L  +   I +L++++ +++S  ++L   P+      +   +E +    L  N+ +  
Sbjct: 126 SQKLTTLPKEIGQLRNLQELDLS-FNSLTTLPK------EVGQLENLQRLDLHQNRLA-- 176

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-L 458
            +LP  +   K+L  L++ +  KL  LP E+  L  L+EL +    +  +PK + QL  L
Sbjct: 177 -TLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNL 234

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
             L L   +   +LP  +   ++L +L ++D +    LP EIG L+ L++L ++   I  
Sbjct: 235 KTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITA 292

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +P+ +GQL +L+ L L  N L  +P+ + QL +L  L L  N L  +P+ ++ L +L+ L
Sbjct: 293 LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVL 352

Query: 579 DLFENNLDRIP 589
           DL  N L  +P
Sbjct: 353 DLDNNQLTTLP 363



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 42/320 (13%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L +   ++  LP+ +GQL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSG 382
             L +L+L + + L  +   I +LK+++ +++ N + L   P+       +   ++  + 
Sbjct: 163 ENLQRLDL-HQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHRNQ 220

Query: 383 IERIPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
           +  +P  + +L          ++L +LP  +   ++L +L ++D  +L  LP E+G L+ 
Sbjct: 221 LTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPKEIGELQN 279

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           LE L +    I  +PK + QL  L +L L + +   +LP  +   ++L  L  +D     
Sbjct: 280 LEILVLRENRITALPKEIGQLQNLQRLDLHQ-NQLTTLPKEIGQLQNLQEL-CLDENQLT 337

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
            LP EI  L+ L+VL +    +  +P+ +GQL +L+ L L +N L   P+ + QL +L  
Sbjct: 338 TLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQE 397

Query: 555 LKLSNNNLERIPERLDPLSS 574
           L L           L+PLSS
Sbjct: 398 LHLY----------LNPLSS 407



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 57/387 (14%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQY 133
            K+T L  +++ L +LK +DL +++L T LP ++   +NL+ LDL + +SLT     +  
Sbjct: 58  QKLTTLPKEIKQLQNLKLLDLGHNQL-TALPKEIGQLRNLQELDLSF-NSLTTLPKEVGQ 115

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV 191
           L  L+ L+L+  K LT+LP  I   + L+ L L   ++L  LPK +        L L   
Sbjct: 116 LENLQRLNLNSQK-LTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLDLHQN 173

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS--C 249
            +  LP  I  L N+ EL + S K L  +   I +L+ L+ + +HR    Q   +P    
Sbjct: 174 RLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDLHRN---QLTTLPKEIG 229

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
            +   ++     ++L         +LP      ++L +L ++D      LP E+G LQ L
Sbjct: 230 QLQNLKTLNLIVTQLT--------TLPKEIGELQNLKTLNLLDN-QLTTLPKEIGELQNL 280

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
             L++    I  LP+ +GQL  L +L+L + ++L  +   I +L++++ +    C     
Sbjct: 281 EILVLRENRITALPKEIGQLQNLQRLDL-HQNQLTTLPKEIGQLQNLQEL----C----- 330

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
                   +D                 ++L +LP  +   ++L  L+ +D  +L  LP E
Sbjct: 331 --------LDE----------------NQLTTLPKEIEQLQNLRVLD-LDNNQLTTLPKE 365

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQL 456
           +G L+ L+EL ++   +   PK + QL
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQL 392



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 41/301 (13%)

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL---- 118
             ENL  L +   K+T L  ++  L +L+ +DL ++ L T   ++   +NL+ LDL    
Sbjct: 115 QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNR 174

Query: 119 --------GYCSSLTETH----------SSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
                   G   +L E              I+ L  L+ LDL R + LT+LP  I   + 
Sbjct: 175 LATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQN 233

Query: 160 LKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           LK L L   + L  LPK +       TL LL   +  LP  I  L N+ E+L+    R+ 
Sbjct: 234 LKTLNL-IVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNL-EILVLRENRIT 291

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
            +   I +LQ L+ + +H+    Q   +P         +E    E +L   P+       
Sbjct: 292 ALPKEIGQLQNLQRLDLHQN---QLTTLPKEIGQLQNLQELCLDENQLTTLPKE------ 342

Query: 279 QCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
               + L +L ++D  N     LP E+G LQ L  L +D   +   P+ + QL  L +L 
Sbjct: 343 ---IEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 399

Query: 337 L 337
           L
Sbjct: 400 L 400


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 168/349 (48%), Gaps = 45/349 (12%)

Query: 8   IQINPYTFSKMTELRLLKFC-GSKNKCMVHSLE-------GVPFTELRYFEWHQFPLKTL 59
           I+     F  M +LRLLK C G K   MV + E         P  ELRY  W  +PL+ L
Sbjct: 545 IEFTTEAFKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELRYLHWDGYPLEYL 604

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL 118
            +  H ENLV L +  SK+  LW  ++ L  LK I+L +S+ L ++PD S   NLE L L
Sbjct: 605 PSNFHGENLVELNLRYSKLRVLWQGLKPLEKLKVINLSHSQQLIQIPDFSDTPNLESLIL 664

Query: 119 GYCSSLTETHSSIQYLNKLEVLDLDRC---KSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
             C++L    SSI +L+ L  LDL  C   + L  +P +++S  L+ L L  C NLK+LP
Sbjct: 665 KGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYS--LEYLNLASCKNLKSLP 722

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS-SSIFKLQFLESIR 234
           + + C+L+    L  +G  +LP ++  L  + +L   S + +   S SS+  L  L+ + 
Sbjct: 723 E-SLCNLKCLKTLNVIGCSKLPDNLGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLD 781

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           +H    +Q     S +I    S E    EL L  C              +LT  EI    
Sbjct: 782 MHDTNLMQ--RAISGDIGSLYSLE----ELNLSYC--------------NLTEKEI---- 817

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
                PD++  L +L  L + G     + + + QL+ L +L L++C  L
Sbjct: 818 -----PDDICCLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSL 861



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 169/374 (45%), Gaps = 78/374 (20%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L  L LK C+ LE I SSI+ L S+ ++++S+CS L+   EIP+               L
Sbjct: 659 LESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPW--------NLYSLEYL 710

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
            L  C  L+SLP SLC  K L +L +I C K   LPD LG+LE LE+L    + +   P+
Sbjct: 711 NLASCKNLKSLPESLCNLKCLKTLNVIGCSK---LPDNLGSLECLEKLYASSSELIS-PQ 766

Query: 452 SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK--NFMR--LPDEIGNLEYLK 507
           S + LA                        L SL+++D    N M+  +  +IG+L  L+
Sbjct: 767 SDSSLA-----------------------GLCSLKVLDMHDTNLMQRAISGDIGSLYSLE 803

Query: 508 VLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLER 564
            L +    +  +E+P+ +  L SL  L LS N    + ++++QLS L  L L +  +L  
Sbjct: 804 ELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSLLE 863

Query: 565 IPERLDPLSSLKYLD---------LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
           IP+     SSL+ LD         L   ++ +    L  F ++   E   ++     R  
Sbjct: 864 IPKL---PSSLRVLDAHDCTGIKTLSSTSVLQWQWQLNCFKSAFLQEIQEMK----YRRL 916

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG-NEIPKWFRHQSTGSTISLKTPQPT 674
           L L  N +S+                   S   PG  E+P+W +HQ  G+ + +  P P 
Sbjct: 917 LSLPANGVSQGF-----------------STVIPGSGELPEWIQHQGVGNEVIVPLP-PN 958

Query: 675 GYNK-LMGFAFCVV 687
            Y+K  +G A C V
Sbjct: 959 WYDKDFLGLALCCV 972


>gi|297811953|ref|XP_002873860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319697|gb|EFH50119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 200/466 (42%), Gaps = 78/466 (16%)

Query: 304  GNLQALNRLIIDGTAIRELP--EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
            GN  A     ID    R+L    GL +   L +L L+ C  L  +   +  +K +  + +
Sbjct: 654  GNKDASKLKWIDFNHSRKLYTLSGLAEARNLQELNLEGCIALATLPQDMENMKCLVFLNL 713

Query: 362  SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
              C++LK  PEI   +++           L L+ CSK +       +FK ++        
Sbjct: 714  RGCTSLKYLPEINLISLE----------TLILSDCSKFK-------VFKVIS-------- 748

Query: 422  KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSK 480
                        E LE + ++GT I+E+P  +  L  L  L +K C   ++LP  L   K
Sbjct: 749  ------------EKLEAIYLDGTAIKELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELK 796

Query: 481  SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NL 539
            +L  L +  C      P+   N+  L++L +  TAI+E+P     + SL +L LS N  +
Sbjct: 797  ALQELILSGCSKLQSFPEVAKNMNRLEILLLDETAIKEMP----NIFSLRYLCLSRNEKI 852

Query: 540  QIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
              +PE+++Q S L  L +    +L  +P +L P  +L+ LD   +    +   ++     
Sbjct: 853  CRLPENISQFSRLKWLDMKYCKSLTYLP-KLPP--NLQCLD--AHGCSSLKSIVQPLAHV 907

Query: 599  IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV--------NGETY--ITKSMYF 648
            + +E   +  +     C KL+     EI      K  +        N +    I  S  F
Sbjct: 908  MATE--HIHSTFIFTKCDKLEQAAKEEISSYSQRKCQILPSALKLCNKDLVPEILFSTCF 965

Query: 649  PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCN 708
            PG EIP WF HQ+ GS +  ++PQ   YNKL G AFC VV+    + C+ ++  +    N
Sbjct: 966  PGGEIPPWFYHQAIGSKVKFESPQHWKYNKLSGIAFCAVVSF---QNCQDQTRTEREHTN 1022

Query: 709  LFDVV-----------CDRRSEGYDSYTSSYLGKISHVESDHVFLG 743
               V            C   +    S+T     K +  ESDHVF+G
Sbjct: 1023 CLSVKFTCTSTTDAEPCTETTWKVGSWTEQGNNKDT-TESDHVFIG 1067



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 194/411 (47%), Gaps = 58/411 (14%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS------KNKCMVHSLEGV--PFTELRYFEWH 52
           ++ +N    ++   F+ M+ +R LK   +          M+   +G+  PF ELR   W 
Sbjct: 563 LADLNMNNSLHSQAFNLMSNIRFLKIYNTCCPQECDRDIMLKFPDGLELPFDELRCLHWL 622

Query: 53  QFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPLK L      +NLV LK+  S++ ++W+  ++   LK ID  +S+ L  L  L+ A+
Sbjct: 623 KFPLKELPPDFDPKNLVDLKLHYSEIERVWEGNKDASKLKWIDFNHSRKLYTLSGLAEAR 682

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NL+ L+L  C +L      ++ +  L  L+L  C SL  LP  I+   L+ L+L  CS  
Sbjct: 683 NLQELNLEGCIALATLPQDMENMKCLVFLNLRGCTSLKYLP-EINLISLETLILSDCSKF 741

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K + K+ S  L + + L G  I+ELPS I+ L  +  L +  CK+L+ +  S+ +L+ L+
Sbjct: 742 K-VFKVISEKLEA-IYLDGTAIKELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKALQ 799

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                                          EL L  C + +S P    + K++  LEI+
Sbjct: 800 -------------------------------ELILSGCSKLQSFPE---VAKNMNRLEIL 825

Query: 292 DCPNFERLPDELGNLQALNRLIID-GTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
                E    E+ N+ +L  L +     I  LPE + Q + L  L++K C  L Y+    
Sbjct: 826 LLD--ETAIKEMPNIFSLRYLCLSRNEKICRLPENISQFSRLKWLDMKYCKSLTYLP--- 880

Query: 351 FKL-KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
            KL  +++ ++   CS+LK   + P  ++  +  E I S+ +   KC KLE
Sbjct: 881 -KLPPNLQCLDAHGCSSLKSIVQ-PLAHVMAT--EHIHSTFI-FTKCDKLE 926


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1867

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 121/236 (51%), Gaps = 11/236 (4%)

Query: 2   SKINSEIQINPYTFSKMTELRLL-----KFCGSKNKCMVHSLEGVPFTELRYFEWHQFPL 56
           S IN ++ I+   F +M  LR L     ++  +    +   LE  P   LR   W  +P 
Sbjct: 398 SGIN-KVFISEGAFKRMRNLRFLSVYKTRYVQNDQVDIPKDLEFPP--HLRLLRWEAYPR 454

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             L    H E L+ L +  S++ +LW   Q L +LK++DL  S  L +LPDLS A NLE 
Sbjct: 455 NALPTTFHPEYLIELDLQESQLERLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLER 514

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L+L YC SL E  SS   L KLE L +  C  L  +PT I+   L  + ++GCS LK+LP
Sbjct: 515 LELSYCKSLVEIPSSFSELRKLETLIIHNCTKLEVVPTLINLASLDFVDMQGCSQLKSLP 574

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            + S H+ S L +    +EELP+SI   + +  L I      + ++     L++L+
Sbjct: 575 GI-STHI-SILVIDDTVLEELPTSIILCTRLTSLFIKGSGNFKTLTPLPMSLKYLD 628



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 40/273 (14%)

Query: 422 KLERL---PDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           +LERL      L NL+ ++  R   + ++E+P       L +L+L  C S   +PS    
Sbjct: 475 QLERLWQGTQPLTNLKKMDLTR--SSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSE 532

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSDN 537
            + L +L I +C     +P  I NL  L  + ++G + ++ +P   G  + +  LV+ D 
Sbjct: 533 LRKLETLIIHNCTKLEVVPTLI-NLASLDFVDMQGCSQLKSLP---GISTHISILVIDDT 588

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS-SLKYLDLFENNLDRIPEYLRSFP 596
            L+ +P S+   + L SL +  +   +    L PL  SLKYLDL                
Sbjct: 589 VLEELPTSIILCTRLTSLFIKGSGNFKT---LTPLPMSLKYLDL-------------RCT 632

Query: 597 TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKW 656
            S  ++       +     L+ +P     II+          +++       PG E+P+ 
Sbjct: 633 ASFFAQVLKFICGLQFHQLLQTEPRSTKSIIQ----------QSFFPMLRVLPGREVPET 682

Query: 657 FRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
           F HQ+ G+ +++     + +++   F  C+V++
Sbjct: 683 FNHQAKGNFLTISDSHFSAFSR---FKACIVIS 712



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 486 LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLIIH 542

Query: 363 NCSNLKGFPE-IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
           NC+ L+  P  I   ++D           + +  CS+L+SLP       +  S+ +ID  
Sbjct: 543 NCTKLEVVPTLINLASLD----------FVDMQGCSQLKSLPG----ISTHISILVIDDT 588

Query: 422 KLERLPDELGNLEALEELRVEGTG----IREVPKSLAQLAL 458
            LE LP  +     L  L ++G+G    +  +P SL  L L
Sbjct: 589 VLEELPTSIILCTRLTSLFIKGSGNFKTLTPLPMSLKYLDL 629



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 14/167 (8%)

Query: 341 SELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           S+LE +      L +++ ++++  S+LK  P++     + + +ER     L+L+ C  L 
Sbjct: 474 SQLERLWQGTQPLTNLKKMDLTRSSHLKELPDLS----NATNLER-----LELSYCKSLV 524

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALS 459
            +PSS    + L +L I +C KLE +P  L NL +L+ + ++G + ++ +P     +++ 
Sbjct: 525 EIPSSFSELRKLETLIIHNCTKLEVVP-TLINLASLDFVDMQGCSQLKSLPGISTHISIL 583

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            +     +  E LP+ + +   LTSL I    NF  L     +L+YL
Sbjct: 584 VI---DDTVLEELPTSIILCTRLTSLFIKGSGNFKTLTPLPMSLKYL 627



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 44/185 (23%)

Query: 150 SLPTSIHSKYLKRLVLR---------GCSNLKNLPKMT---SCHLRSTLPLLGVGIEELP 197
           +LPT+ H +YL  L L+         G   L NL KM    S HL+           ELP
Sbjct: 456 ALPTTFHPEYLIELDLQESQLERLWQGTQPLTNLKKMDLTRSSHLK-----------ELP 504

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ----FLEMPSCNIDG 253
             +   +N+  L +  CK L  I SS  +L+ LE++ IH C  L+     + + S +   
Sbjct: 505 D-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLIIHNCTKLEVVPTLINLASLDF-- 561

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
                     + ++ C + +SLP       +  S+ +ID    E LP  +     L  L 
Sbjct: 562 ----------VDMQGCSQLKSLPG----ISTHISILVIDDTVLEELPTSIILCTRLTSLF 607

Query: 314 IDGTA 318
           I G+ 
Sbjct: 608 IKGSG 612


>gi|110741708|dbj|BAE98800.1| hypothetical protein [Arabidopsis thaliana]
          Length = 574

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 157/343 (45%), Gaps = 39/343 (11%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFT-----ELRYFEWHQFPLKTLN- 60
           E+ I    F +M+ LR L    SK+    + +  +P        LR  +W  +P K    
Sbjct: 151 EVYIREGAFRRMSNLRFLTVYKSKDDG--NDIMDIPKRMEFPRRLRILKWEAYPNKCFPP 208

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             H E LV L M  SK+  LW   Q L +LK ++LK S  L  LP+LS A  +EIL L  
Sbjct: 209 KFHPEYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSD 268

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SS  +L +LE L L  C SL  +P  ++ ++L  L +RGCS L+N+P M+  
Sbjct: 269 CKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSRLRNIPVMS-- 326

Query: 181 HLRSTLPLLGV---GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI---- 233
              + L  L +    +E++ +SI    ++  L I S  +L  ++     ++FL+      
Sbjct: 327 ---TRLYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGI 383

Query: 234 -RIHRCPNLQFLEMPSCNIDGTRS----KEQPSSELKLKKCPRPESLPSGQCMFKS---- 284
            RI  C   ++L + S  I G R      E P+S LK       ESL +  C FK+    
Sbjct: 384 ERIPNCIKDRYL-LKSLTISGCRRLTSLPELPAS-LKFLVADDCESLETVFCPFKTSKCW 441

Query: 285 -LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI---RELP 323
                E  +C       D+      + R    GT +   RE+P
Sbjct: 442 PFNIFEFTNCFKL----DQEARRAIIQRPFFHGTTLLPGREVP 480



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 78/367 (21%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L +KN S+LEY+      LK+++ + +   SNLK  P +     + + +E     +L
Sbjct: 215 LVELVMKN-SKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLS----NATKME-----IL 264

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           KL+ C  L  +PSS    + L  L +  C  LE +P ++ NLE L +             
Sbjct: 265 KLSDCKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM-NLEFLYD------------- 310

Query: 452 SLAQLALSKLKLKKCSSFESLP---SRLY-VSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
                    L ++ CS   ++P   +RLY ++ S T++E +           I +  ++ 
Sbjct: 311 ---------LDMRGCSRLRNIPVMSTRLYFLNISETAVEDVSAS--------ITSWHHVT 353

Query: 508 VLTIKGTAIREVPESLGQLSSL----EWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNL 562
            L+I  +A       L  L+ L    E+L LS + ++ IP  +     L SL +S    L
Sbjct: 354 HLSINSSA------KLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLLKSLTISGCRRL 407

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
             +PE     +SLK+L    ++ + +      F TS    F     +    NC KLD   
Sbjct: 408 TSLPELP---ASLKFL--VADDCESLETVFCPFKTSKCWPFNIFEFT----NCFKLDQEA 458

Query: 623 LSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGF 682
              II+  +     +G T +      PG E+P  F H+  G+T+++   +   Y    G 
Sbjct: 459 RRAIIQRPFF----HGTTLL------PGREVPAEFDHRGRGNTLTIPLERKRSYR---GV 505

Query: 683 AFCVVVA 689
            FCVV++
Sbjct: 506 GFCVVIS 512



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 29/271 (10%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLAL 331
           E L  G    K+L  + +    N + LP+ L N   +  L + D  ++ E+P     L  
Sbjct: 226 EYLWQGTQPLKNLKEMNLKGSSNLKALPN-LSNATKMEILKLSDCKSLVEIPSSFSHLQR 284

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIP 387
           L KL L+ C  LE I + +  L+ +  +++  CS L+  P     + F NI  + +E + 
Sbjct: 285 LEKLRLRGCISLEVIPADM-NLEFLYDLDMRGCSRLRNIPVMSTRLYFLNISETAVEDVS 343

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSL----EIIDC--KKLERLPDELGNLEALEELRV 441
           +S+   +  + L S+ SS    + LT L    E +D     +ER+P+ + +   L+ L +
Sbjct: 344 ASITSWHHVTHL-SINSS-AKLRGLTHLPRPVEFLDLSYSGIERIPNCIKDRYLLKSLTI 401

Query: 442 EG----TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            G    T + E+P SL  L         C S E++      SK      I +  N  +L 
Sbjct: 402 SGCRRLTSLPELPASLKFLVAD-----DCESLETVFCPFKTSKCW-PFNIFEFTNCFKL- 454

Query: 498 DEIGNLEYLKVLTIKGTAI---REVPESLGQ 525
           D+      ++     GT +   REVP     
Sbjct: 455 DQEARRAIIQRPFFHGTTLLPGREVPAEFDH 485


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 154/339 (45%), Gaps = 41/339 (12%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L + DC     +P E+G L AL  L +   A+  LP  +GQL  L +L L   ++L  + 
Sbjct: 9   LALADCGLTGAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTG-NQLTSVP 67

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLE 400
           + I +L S+E +                  + G+ +  +P+ + +           +KL 
Sbjct: 68  ADIGQLTSLERLW-----------------LHGNRLTSVPAEIGQFAALIELWLWGNKLT 110

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALS 459
           S+P  +    SLT L  +   +L  LP E+G L AL EL +    +  VP  + QL +L 
Sbjct: 111 SVPEEIGQLTSLTYLH-LGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLTSLV 169

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
           KL L K +   ++P+  +   SL  L  +D      +P +IG L  L  L + G  +  V
Sbjct: 170 KLNLTK-NQLTNVPAEFWRLTSLGEL-YLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSV 227

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           P  +GQL+SLE L LS N L  +P  + QL SL  L LS N L  +P  +  L+++  L 
Sbjct: 228 PAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELY 287

Query: 580 LFENNLDRIPEYLRSFP------------TSIPSEFTSL 606
           L  N L  +P  +                TS+P+E   L
Sbjct: 288 LSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQL 326



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 178/373 (47%), Gaps = 40/373 (10%)

Query: 269 CPRPESLPSGQCMFKSLTSLE--IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
           C     L S       LTSLE   +       +P E+G   AL  L + G  +  +PE +
Sbjct: 57  CLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEI 116

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
           GQL  L+ L L   ++L  + + I +L ++  + ++         E    N+    I ++
Sbjct: 117 GQLTSLTYLHL-GSNQLTSLPAEIGQLTALTELNLT---------ENQLTNVPAE-IGQL 165

Query: 387 PSSVLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
            +S++KLN   ++L ++P+      SL  L  +D  +L  +P ++G L +L  L + G  
Sbjct: 166 -TSLVKLNLTKNQLTNVPAEFWRLTSLGEL-YLDDNRLTSVPADIGQLTSLTWLGLYGNQ 223

Query: 446 IREVPKSLAQLALSKLKLKKCSS--FESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIG 501
           +  VP  + QL  + L+L + SS    S+P+ +   + L SLE +D        +P EIG
Sbjct: 224 LTSVPAEIGQL--TSLELLRLSSNQLTSVPAEI---RQLRSLERLDLSGNQLTSVPLEIG 278

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
            L  +  L +    +  +P  +GQL+SLE L L DN L  +P  + QL+SL  L L++N 
Sbjct: 279 QLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQ 338

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIP----------EY-LRSFP-TSIPSEFTSLRLS 609
           L  +P  +  L+SL+   L  N L  +P          E+ LRS   TS+P+    L  +
Sbjct: 339 LTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAILELEAA 398

Query: 610 ---VDLRNCLKLD 619
              VDL + + +D
Sbjct: 399 GCDVDLDDGVTVD 411



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 20/196 (10%)

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL-PDEIGNLEYLKVLTIKGTAIRE 518
           +L L  C    ++P+ +    +L  L +   +N + L P EIG L  L+ L + G  +  
Sbjct: 8   ELALADCGLTGAVPAEVGRLTALRELNV--ARNALTLLPAEIGQLTSLRELCLTGNQLTS 65

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           VP  +GQL+SLE L L  N L  +P  + Q ++L+ L L  N L  +PE +  L+SL YL
Sbjct: 66  VPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYL 125

Query: 579 DLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
            L  N L  +P  +                T++P+E   L   V     L L  N+L+ +
Sbjct: 126 HLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLTSLVK----LNLTKNQLTNV 181

Query: 627 IKDGWMKQSVNGETYI 642
             + W   S+ GE Y+
Sbjct: 182 PAEFWRLTSL-GELYL 196


>gi|227438221|gb|ACP30600.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 909

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 152/313 (48%), Gaps = 28/313 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS---KNKCMVHSLEGVPF--TELRYFEWHQFP 55
           +S IN E  +N  +F  M  L  LKF  S   KN+  +H   G+ +   +LR   W  +P
Sbjct: 534 ISTIN-EWFLNERSFGGMHNLMFLKFYKSSLGKNQTELHLPRGLDYLPRKLRLLHWDTYP 592

Query: 56  LKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLE 114
             +L +    E LV L +  SK+ +LW+  Q L SL  +DL  S+ L ++PDLS A N+E
Sbjct: 593 TTSLPLSFRPEFLVVLNLRESKLEKLWEGEQPLRSLTHMDLSMSENLKEIPDLSKAVNME 652

Query: 115 ILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNL 174
            L L +CSSL     S++ LNKL VL+++ C  L S+P +I+ + L  L L  CS L   
Sbjct: 653 ELCLSHCSSLVMLPPSVKNLNKLVVLEMECCSKLESIPKNINLESLSILNLDKCSRLTTF 712

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR 234
           P ++S      L +    IE++P +I    N+  L +  C  L+                
Sbjct: 713 PDVSSN--IGYLSISETAIEQVPETIMSWPNLAALDMSGCTNLKTFPC------------ 758

Query: 235 IHRCPN-LQFLEMPSCNIDGTRSKEQP---SSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
               PN +++L+     I+   S+ Q     S+L +  C +  S+ SG    +++ +L+ 
Sbjct: 759 ---LPNTIEWLDFSRTEIEEVPSRVQNLYRLSKLLMNSCMKLRSISSGISRLENIETLDF 815

Query: 291 IDCPNFERLPDEL 303
           + C N    P E+
Sbjct: 816 LGCKNVVNYPVEI 828



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 25/233 (10%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           E L  G+   +SLT +++    N + +PD    +      +   +++  LP  +  L  L
Sbjct: 616 EKLWEGEQPLRSLTHMDLSMSENLKEIPDLSKAVNMEELCLSHCSSLVMLPPSVKNLNKL 675

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNIDGSGIERIPS 388
             LE++ CS+LE I  +I  L+S+  + +  CS L  FP+    I + +I  + IE++P 
Sbjct: 676 VVLEMECCSKLESIPKNI-NLESLSILNLDKCSRLTTFPDVSSNIGYLSISETAIEQVPE 734

Query: 389 SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIRE 448
           +++                 + +L +L++  C  L+  P     +E L+  R E   I E
Sbjct: 735 TIMS----------------WPNLAALDMSGCTNLKTFPCLPNTIEWLDFSRTE---IEE 775

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
           VP  +  L  LSKL +  C    S+ S +   +++ +L+ + CKN +  P EI
Sbjct: 776 VPSRVQNLYRLSKLLMNSCMKLRSISSGISRLENIETLDFLGCKNVVNYPVEI 828



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 18/188 (9%)

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
           SK     EL L  C     LP        L  LE+  C   E +P  + NL++L+ L +D
Sbjct: 646 SKAVNMEELCLSHCSSLVMLPPSVKNLNKLVVLEMECCSKLESIPKNI-NLESLSILNLD 704

Query: 316 G-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
             + +   P+    +  LS  E    + +E +  +I    ++ ++++S C+NLK FP +P
Sbjct: 705 KCSRLTTFPDVSSNIGYLSISE----TAIEQVPETIMSWPNLAALDMSGCTNLKTFPCLP 760

Query: 375 ----FCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
               + +   + IE +PS V        L +N C KL S+ S +   +++ +L+ + CK 
Sbjct: 761 NTIEWLDFSRTEIEEVPSRVQNLYRLSKLLMNSCMKLRSISSGISRLENIETLDFLGCKN 820

Query: 423 LERLPDEL 430
           +   P E+
Sbjct: 821 VVNYPVEI 828



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 12/196 (6%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  ++ LN + SKLE L       +SLT +++   + L+ +PD L     +EEL +   +
Sbjct: 602 PEFLVVLNLRESKLEKLWEGEQPLRSLTHMDLSMSENLKEIPD-LSKAVNMEELCLSHCS 660

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +P S+  L  L  L+++ CS  ES+P  + + +SL+ L +  C      PD   N+
Sbjct: 661 SLVMLPPSVKNLNKLVVLEMECCSKLESIPKNINL-ESLSILNLDKCSRLTTFPDVSSNI 719

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNL 562
            Y   L+I  TAI +VPE++    +L  L +S   NL+  P   N +     L  S   +
Sbjct: 720 GY---LSISETAIEQVPETIMSWPNLAALDMSGCTNLKTFPCLPNTIE---WLDFSRTEI 773

Query: 563 ERIPERLDPLSSLKYL 578
           E +P R+  L  L  L
Sbjct: 774 EEVPSRVQNLYRLSKL 789


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L ++P  L QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%)

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLV 553
           + LP EIG L+ L+ L +    +  +PE +GQL +L+ L L +N L  IP+ + QL +L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 554 SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
            L L++N L  +PE ++ L  L+ L L  N  + I
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSI 179



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L++L +    +  +P+ +G+L +L+ L LS N L  +PE + QL +L  L
Sbjct: 64  LPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKL 123

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           KL  N L  IP+ +  L +L+ L+L  N L  +PE
Sbjct: 124 KLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 175/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             P+ +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPKEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L  + + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNVLPNKLEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N+ +   +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYNQLA---TLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP---- 270
            +L  +   I +LQ L+ +                ++DG +    P +  +L++      
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRLQTLYL 332

Query: 271 ---RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
              +   LP+     ++L SL+ ++      LP E+G LQ L  L +    +  LPE + 
Sbjct: 333 GNNQLNVLPNKLEQLQNLESLD-LEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 152/309 (49%), Gaps = 27/309 (8%)

Query: 46   LRYFEWHQFPLKTLNILHWE--NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            L+Y  W+ +P  +L  L++E   LV L MP S + +LWD  +NL  LKR+DL  S+ L +
Sbjct: 832  LQYLLWYGYPFASLP-LNFEPLRLVELNMPCSLIKRLWDGHKNLPCLKRVDLSNSRCLVE 890

Query: 104  LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSK----Y 159
             P+ + +Q +E LD   C +L+  H SI  L +L  L L+ C++L SL    H       
Sbjct: 891  TPNFTGSQIIERLDFTGCINLSYVHPSIGLLKELAFLSLEGCRNLVSLVLDGHPASNLYS 950

Query: 160  LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG----VGIEELPSSIKCLSNIGELLIYSCK 215
            LK L L GCS L+ +         S L  L     V +  +  SI  L+ +  L    C 
Sbjct: 951  LKVLHLSGCSKLEIVSDFRGV---SNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECT 1007

Query: 216  RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
             L +I  SI  +  LE++ +  C  L+ L +      G  S  + + +L        + L
Sbjct: 1008 SLASIPESINSMTSLETLDLCGCFKLESLPLL-----GNTSVSEINVDLS------NDEL 1056

Query: 276  PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL 335
             S   M  SL  L++  C N  R+P+ +G L+ L RL ++G  +  LP  +G L+ L+ L
Sbjct: 1057 ISSYYM-NSLIFLDLSFC-NLSRVPNAIGELRHLERLNLEGNNLISLPSSVGGLSSLAYL 1114

Query: 336  ELKNCSELE 344
             L +CS L+
Sbjct: 1115 NLAHCSRLQ 1123



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 189/433 (43%), Gaps = 61/433 (14%)

Query: 282  FKSLTSLEI-IDCPNFERLPDELGNLQALNRLIIDGT-AIRELPEGLGQLALLSKLELKN 339
            F+ L  +E+ + C   +RL D   NL  L R+ +  +  + E P   G   ++ +L+   
Sbjct: 849  FEPLRLVELNMPCSLIKRLWDGHKNLPCLKRVDLSNSRCLVETPNFTGS-QIIERLDFTG 907

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSK 398
            C  L Y+  SI  LK +  + +  C NL          +DG     + S  VL L+ CSK
Sbjct: 908  CINLSYVHPSIGLLKELAFLSLEGCRNLVSLV------LDGHPASNLYSLKVLHLSGCSK 961

Query: 399  LESLPSSLCMFKSLTSLEIID---CKKLERLPDELGNLEALEELRV-EGTGIREVPKSLA 454
            LE +      F+ +++LE +D   C  L  +   +G+L  L+ L   E T +  +P+S+ 
Sbjct: 962  LEIVSD----FRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESIN 1017

Query: 455  QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
             + +L  L L  C   ESLP  L  + S++ + + D  N     DE+ +  Y+       
Sbjct: 1018 SMTSLETLDLCGCFKLESLP--LLGNTSVSEINV-DLSN-----DELISSYYM------- 1062

Query: 514  TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
                         +SL +L LS  NL  +P ++ +L  L  L L  NNL  +P  +  LS
Sbjct: 1063 -------------NSLIFLDLSFCNLSRVPNAIGELRHLERLNLEGNNLISLPSSVGGLS 1109

Query: 574  SLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL-------RLSVDLRNCLKLDPNELSE 625
            SL YL+L   + L  +PE      +S    +  +       R  + + NC  L     S 
Sbjct: 1110 SLAYLNLAHCSRLQSLPELQLCATSSYGGRYFKMVSGSHNHRSGLYIFNCPHLKMTGQSL 1169

Query: 626  IIKDGWMKQSVNGETYI--TKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFA 683
             +   W+K  V    +      +  P + IP WF HQ  G++  +K      ++  +GFA
Sbjct: 1170 DLAVLWLKNLVKNPCHFRCGLDIVVPSDTIPLWFDHQFAGNS-RVKITDYNKFDNWLGFA 1228

Query: 684  FCVVVACSVSECC 696
            FCV     V  CC
Sbjct: 1229 FCVAF---VENCC 1238



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 102/263 (38%), Gaps = 68/263 (25%)

Query: 5    NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
            NS   +    F+    +  L F G  N   VH   G+              LK L  L  
Sbjct: 884  NSRCLVETPNFTGSQIIERLDFTGCINLSYVHPSIGL--------------LKELAFLSL 929

Query: 65   E---NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            E   NLVSL + G   +       NL SLK + L     L  + D     NLE LD+  C
Sbjct: 930  EGCRNLVSLVLDGHPAS-------NLYSLKVLHLSGCSKLEIVSDFRGVSNLEYLDIDQC 982

Query: 122  SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP----- 175
             SL+  + SI  L +L+ L    C SL S+P SI+S   L+ L L GC  L++LP     
Sbjct: 983  VSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSLETLDLCGCFKLESLPLLGNT 1042

Query: 176  --------------------------KMTSCHLRST------------LPLLGVGIEELP 197
                                       ++ C+L               L L G  +  LP
Sbjct: 1043 SVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGELRHLERLNLEGNNLISLP 1102

Query: 198  SSIKCLSNIGELLIYSCKRLENI 220
            SS+  LS++  L +  C RL+++
Sbjct: 1103 SSVGGLSSLAYLNLAHCSRLQSL 1125


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 131

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 132 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 184

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 185 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 243

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 244 LQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 302

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L ++P  L QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 303 LPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 362

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 363 NLKYNQLATLPEEIKQL 379



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%)

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLV 553
           + LP EIG L+ L+ L +    +  +PE +GQL +L+ L L +N L  IP+ + QL +L 
Sbjct: 71  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 130

Query: 554 SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
            L L++N L  +PE ++ L  L+ L L  N  + I
Sbjct: 131 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSI 165



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L++L +    +  +P+ +G+L +L+ L LS N L  +PE + QL +L  L
Sbjct: 50  LPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKL 109

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           KL  N L  IP+ +  L +L+ L+L  N L  +PE
Sbjct: 110 KLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 144



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 175/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 35  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 94

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 95  ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 150

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 151 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 200

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 201 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 255

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             P+ +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 256 TLPKEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 310

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L  + + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 311 QRLQTLYLGN-NQLNVLPNKLEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 362

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N+ +   +LP  +   K+L  L +    +  +K+ER+
Sbjct: 363 NLKYNQLA---TLPEEIKQLKNLKKLYLHNNPLPSEKIERI 400



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 100 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 159

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 160 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 215

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 216 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE- 274

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP---- 270
            +L  +   I +LQ L+ +                ++DG +    P +  +L++      
Sbjct: 275 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRLQTLYL 318

Query: 271 ---RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
              +   LP+     ++L SL+ ++      LP E+G LQ L  L +    +  LPE + 
Sbjct: 319 GNNQLNVLPNKLEQLQNLESLD-LEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 377

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 378 QLKNLKKLYLHN 389



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 24  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 83

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 84  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 121


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 163/363 (44%), Gaps = 31/363 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVP--FTELRYFEWHQFPLKTLNI-LH 63
           E   +P  F+KM  LRLL        C +H   G+    + L+   W  +PL +L + + 
Sbjct: 544 EAHWDPEAFTKMGNLRLLIIL-----CDLHLSLGLKCLSSSLKVLVWWGYPLNSLPVGIQ 598

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            + LV L+M  SK+ QLW+  +    LK IDL  SK L + P++S   NLE L    C  
Sbjct: 599 LDELVHLQMINSKIKQLWNGNEYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYFNDCIK 658

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP---KMTSC 180
           L E H SI+   KL +L L  C  L   P  +    LK L L  CSN+K LP   K  +C
Sbjct: 659 LVEVHQSIRQHKKLRILSLMGCVDLKIFPKKLEMFSLKMLFLSYCSNIKRLPDFGKNMTC 718

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP- 239
            +     L    +  LP+SI  L ++  L I  C ++ N+   I ++  LE I + R   
Sbjct: 719 -ITELNLLNCENLLSLPNSICNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAI 777

Query: 240 -----------NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE-----SLPSGQCMFK 283
                      NL+ L + SC    T S          K    P      +LP       
Sbjct: 778 RDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHLPFGKKFSFFPAQTTSLTLPPFLSGLS 837

Query: 284 SLTSLEIIDCP-NFERLPDELGNLQALNRLIIDGTAIRELP-EGLGQLALLSKLELKNCS 341
           SLT L++ DC      +P ++  L +L RLI+ G     LP   +  L+ L  LEL++C 
Sbjct: 838 SLTELDLSDCNLTDSSIPHDIDCLSSLERLILSGNNFVCLPTHYISNLSKLRYLELEDCP 897

Query: 342 ELE 344
           +L+
Sbjct: 898 QLQ 900



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 14/139 (10%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKN-----KCMVHSLEGVPFTELRYFEWHQFPLKTLNI 61
            E   +P  FSKM  LRLL      +     KC+  SL+ VP        W  +PL +L +
Sbjct: 1606 EAHWDPEAFSKMGNLRLLIILCDLHLSLGLKCLSSSLK-VPV-------WWGYPLNSLPV 1657

Query: 62   -LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
             +  + LV+L+M  SKV QLW+  +    LK IDL  SK L + P++S   NLE L L  
Sbjct: 1658 GVQLDELVNLQMINSKVKQLWNGNKYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYLND 1717

Query: 121  CSSLTETHSSIQYLNKLEV 139
            C+ L E H SI+   KL V
Sbjct: 1718 CTKLVEVHQSIRQHKKLRV 1736



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 172/405 (42%), Gaps = 67/405 (16%)

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
           +L  L+  G  +  LP G+ QL  L  L++ N S+++ + +       ++ I++SN  +L
Sbjct: 579 SLKVLVWWGYPLNSLPVGI-QLDELVHLQMIN-SKIKQLWNGNEYYGKLKVIDLSNSKDL 636

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           +  P +       SGI  +    L  N C KL  +  S+   K L  L ++ C  L+  P
Sbjct: 637 RQTPNV-------SGIPNLEE--LYFNDCIKLVEVHQSIRQHKKLRILSLMGCVDLKIFP 687

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
            +L             + I+ +P     +  +++L L  C +  SLP+ +   KSL  L 
Sbjct: 688 KKLEMFSLKMLFLSYCSNIKRLPDFGKNMTCITELNLLNCENLLSLPNSICNLKSLRILN 747

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL---------SDN 537
           I  C     LPD I  +  L+ + +  TAIR++  SL QL +L+ L L         S  
Sbjct: 748 ISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSW 807

Query: 538 NLQI-----------------IPESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYL 578
           N  +                 +P  L+ LSSL  L LS+ NL    IP  +D LSSL+ L
Sbjct: 808 NFHLPFGKKFSFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERL 867

Query: 579 DLFENNLDRIPEY------------------LRSFPTSIPSEFTSLRLSV---DLRNCLK 617
            L  NN   +P +                  L+S P   P     +RL V   D R    
Sbjct: 868 ILSGNNFVCLPTHYISNLSKLRYLELEDCPQLQSLPMLQP----QVRLYVTDSDAREAYA 923

Query: 618 LDPNELSEIIKDGWMKQSVNGETYITKSMYFPGN-EIPKWFRHQS 661
           LDP ++ ++ +    K+ ++   Y      +P   E+P  F +Q+
Sbjct: 924 LDPQKIWKLFESS-DKKLLHSSLYRVPDFPYPMYFEMPSRFDNQN 967


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 155/322 (48%), Gaps = 49/322 (15%)

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           +W  +VS+   G K    WD  + L  LK IDL YS  LT+ PD +  QNLE L L  C+
Sbjct: 662 NWRWVVSVLEEGRK---RWD--KYLGKLKSIDLSYSINLTRTPDFTGIQNLEKLVLEGCT 716

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           +L + H SI  L +L++ +   CKS+ SLP+ ++ ++L+   + GCS LK +P+      
Sbjct: 717 NLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMK 776

Query: 183 R-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           R S   L G  +E+LPSS                  E++S S+ +L  L  I I   P  
Sbjct: 777 RLSKFCLGGTAVEKLPSS-----------------FEHLSESLVELD-LSGIVIREQPYS 818

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM--FKSLTSLEIIDCPNFE-R 298
            FL++ +  +            L  +K P P  +P    +  F  LT L + DC   E  
Sbjct: 819 FFLKLQNLRVS--------VCGLFPRKSPHP-LIPVLASLKHFSYLTELNLSDCNLCEGE 869

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI------SSSIFK 352
           +P+++G+L +L  L + G     LP  +  L+ L  ++++NC+ L+ +      S  I  
Sbjct: 870 IPNDIGSLSSLKYLELGGNNFVSLPASIRLLSKLRHIDVENCTRLQQLPELPPASDRIL- 928

Query: 353 LKSVESIEISNCSNLKGFPEIP 374
                 +   NC++L+ FP+ P
Sbjct: 929 ------VTTDNCTSLQVFPDPP 944



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 207/475 (43%), Gaps = 70/475 (14%)

Query: 353  LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
            L  ++SI++S   NL   P       D +GI+ +   VL+   C+ L  +  S+ + K L
Sbjct: 681  LGKLKSIDLSYSINLTRTP-------DFTGIQNLEKLVLE--GCTNLVKIHPSIALLKRL 731

Query: 413  TSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFE 470
                  +CK ++ LP E+ N+E LE   V G + ++ +P+ + Q+  LSK  L   ++ E
Sbjct: 732  KIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRLSKFCLGG-TAVE 789

Query: 471  SLPSRL-YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE-------S 522
             LPS   ++S+SL  L++       +       L+ L+V ++ G   R+ P        S
Sbjct: 790  KLPSSFEHLSESLVELDLSGIVIREQPYSFFLKLQNLRV-SVCGLFPRKSPHPLIPVLAS 848

Query: 523  LGQLSSLEWLVLSDNNL--QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
            L   S L  L LSD NL    IP  +  LSSL  L+L  NN   +P  +  LS L+++D+
Sbjct: 849  LKHFSYLTELNLSDCNLCEGEIPNDIGSLSSLKYLELGGNNFVSLPASIRLLSKLRHIDV 908

Query: 581  FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL----DPNELSEIIKDGWMK--- 633
               N  R    L+  P   P+   S R+ V   NC  L    DP +LS +  + W+    
Sbjct: 909  --ENCTR----LQQLPELPPA---SDRILVTTDNCTSLQVFPDPPDLSRV-SEFWLDCSN 958

Query: 634  -QSVNGETYITKSM-----------------YFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
              S    +Y   S+                   PG+EIP+WF +QS G +++ K P    
Sbjct: 959  CLSCQDSSYFLHSVLKRLVEETPCSFESLKFIIPGSEIPEWFNNQSVGDSVTEKLPLDAC 1018

Query: 676  YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRR--SEGYDSYTSSYLGKIS 733
             +K +GFA C ++    +     E    D    L    C     S GY          + 
Sbjct: 1019 NSKWIGFAVCALIVPQDNPSAVPEDPNLDPDICLDPDTCLIYCLSNGYGICCVGRRIPVK 1078

Query: 734  HVESDH---VFLGSSIFAGENSCKR--SDE--FFFHI--DRSCCEVKKCGIHFVH 779
               SDH   V L S     E+      +DE  FFF    +  C +VKKCG+  ++
Sbjct: 1079 QFVSDHLLLVVLPSPFRCPEDRLADWWNDEVTFFFKAVGNNRCIKVKKCGVRALY 1133


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 177/354 (50%), Gaps = 33/354 (9%)

Query: 247 PSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FE 297
           P    D T++ + P        SE KL   P+           K L +L+++D  +    
Sbjct: 34  PEAYQDLTKALQNPLDVRVLILSEQKLTTLPKE---------IKQLQNLKLLDLGHNQLT 84

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP E+G L+ L  L +   ++  LP+ +GQL  L +L L N  +L  +   I +L++++
Sbjct: 85  ALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL-NSQKLTTLPKEIGQLRNLQ 143

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
            +++S  ++L   P+      +   +E +    L  N+ +   +LP  +   K+L  L++
Sbjct: 144 ELDLS-FNSLTTLPK------EVGQLENLQRLDLHQNRLA---TLPMEIGQLKNLQELDL 193

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
            +  KL  LP E+  L  L+EL +    +  +PK + QL  L  L L   +   +LP  +
Sbjct: 194 -NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEI 251

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+ L L  
Sbjct: 252 GELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQ 310

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           N L  +P+ + QL +L  L L  N L  +P+ ++ L +L+ LDL  N L  +P+
Sbjct: 311 NQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 364



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 163/332 (49%), Gaps = 45/332 (13%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L +   ++  LP+ +GQL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSG 382
             L +L+L + + L  +   I +LK+++ +++ N + L   P+       +   ++  + 
Sbjct: 163 ENLQRLDL-HQNRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHRNQ 220

Query: 383 IERIPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
           +  +P  + +L          ++L +LP  +   ++L +L ++D  +L  LP E+G L+ 
Sbjct: 221 LTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPKEIGELQN 279

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           LE L +    I  +PK + QL  L +L L + +   +LP  +   ++L  L  +D     
Sbjct: 280 LEILVLRENRITALPKEIGQLQNLQRLDLHQ-NQLTTLPKEIGQLQNLQEL-CLDENQLT 337

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
            LP EI  L+ L+VL +    +  +P+ +GQL +L+ L L +N L   P+ + QL +L  
Sbjct: 338 TLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQE 397

Query: 555 LKLSNNNLERIPERLDPLSSLK---YLDLFEN 583
           L L           L+PLSS +   + D F+N
Sbjct: 398 LHLY----------LNPLSSKEKKGFEDYFQN 419



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 182/387 (47%), Gaps = 57/387 (14%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQY 133
            K+T L  +++ L +LK +DL +++L T LP ++   +NL+ LDL + +SLT     +  
Sbjct: 58  QKLTTLPKEIKQLQNLKLLDLGHNQL-TALPKEIGQLRNLQELDLSF-NSLTTLPKEVGQ 115

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV 191
           L  L+ L+L+  K LT+LP  I   + L+ L L   ++L  LPK +        L L   
Sbjct: 116 LENLQRLNLNSQK-LTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLDLHQN 173

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS--C 249
            +  LP  I  L N+ EL + S K L  +   I +L+ L+ + +HR    Q   +P    
Sbjct: 174 RLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDLHRN---QLTTLPKEIG 229

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
            +   ++     ++L         +LP      ++L +L ++D      LP E+G LQ L
Sbjct: 230 QLQNLKTLNLIVTQLT--------TLPKEIGELQNLKTLNLLDN-QLTTLPKEIGELQNL 280

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
             L++    I  LP+ +GQL  L +L+L + ++L  +   I +L++++ +    C +   
Sbjct: 281 EILVLRENRITALPKEIGQLQNLQRLDL-HQNQLTTLPKEIGQLQNLQEL----CLD--- 332

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
                                      ++L +LP  +   ++L  L+ +D  +L  LP E
Sbjct: 333 --------------------------ENQLTTLPKEIEQLQNLRVLD-LDNNQLTTLPKE 365

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQL 456
           +G L+ L+EL ++   +   PK + QL
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQL 392



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 41/301 (13%)

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL---- 118
             ENL  L +   K+T L  ++  L +L+ +DL ++ L T   ++   +NL+ LDL    
Sbjct: 115 QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNR 174

Query: 119 --------GYCSSLTETH----------SSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KY 159
                   G   +L E              I+ L  L+ LDL R + LT+LP  I   + 
Sbjct: 175 LATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQN 233

Query: 160 LKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           LK L L   + L  LPK +       TL LL   +  LP  I  L N+ E+L+    R+ 
Sbjct: 234 LKTLNL-IVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNL-EILVLRENRIT 291

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
            +   I +LQ L+ + +H+    Q   +P         +E    E +L   P+       
Sbjct: 292 ALPKEIGQLQNLQRLDLHQN---QLTTLPKEIGQLQNLQELCLDENQLTTLPKE------ 342

Query: 279 QCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLE 336
               + L +L ++D  N     LP E+G LQ L  L +D   +   P+ + QL  L +L 
Sbjct: 343 ---IEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 399

Query: 337 L 337
           L
Sbjct: 400 L 400


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L ++P  L QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%)

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLV 553
           + LP EIG L+ L+ L +    +  +PE +GQL +L+ L L +N L  IP+ + QL +L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 554 SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRI 588
            L L++N L  +PE ++ L  L+ L L  N  + I
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSI 179



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L++L +    +  +P+ +G+L +L+ L LS N L  +PE + QL +L  L
Sbjct: 64  LPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKL 123

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           KL  N L  IP+ +  L +L+ L+L  N L  +PE
Sbjct: 124 KLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 175/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             P+ +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPKEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L  + + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNVLPNKLEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP---- 270
            +L  +   I +LQ L+ +                ++DG +    P +  +L++      
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRLQTLYL 332

Query: 271 ---RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
              +   LP+     ++L SL+ ++      LP E+G LQ L  L +    +  LPE + 
Sbjct: 333 GNNQLNVLPNKLEQLQNLESLD-LEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 155/322 (48%), Gaps = 28/322 (8%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           +P   C  + LT L  +       +PDE+G L+ +N L +    I ++P+ L  L  L++
Sbjct: 160 IPDSLCALEQLTEL-YMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPDSLCALEQLTE 218

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN 394
           L ++  + L  I   I KLKS++ ++++N                 + IE+IP S+  L 
Sbjct: 219 LYME-YNALTAIPDEIGKLKSMKILKLNN-----------------NNIEKIPDSLCALE 260

Query: 395 KCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
           + ++L        ++P  +   KS+  L++     + ++PD L  LE L EL +    + 
Sbjct: 261 QLTELNVRYNALTAIPDEITKLKSMKILDL-SSNNIAKIPDSLCALEQLTELYMGSDALT 319

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
            +P  + +L   K+     S F  +P  L   + LT L +        +PDEI  L+ LK
Sbjct: 320 AIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNM-HYNALTAIPDEITKLKSLK 378

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
           +L +    I ++P+SL  L  L  L +  N L  IP+ +++L S+ +L LS N + +IP+
Sbjct: 379 ILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLKSMKTLNLSFNKIAKIPD 438

Query: 568 RLDPLSSLKYLDLFENNLDRIP 589
            L  L  L  LD+  N L  IP
Sbjct: 439 SLCALEQLTELDMMSNALTSIP 460



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           +K+  +P SLC  + LT L  +    L  +PDE+G L+ +  L +    I ++P SL  L
Sbjct: 155 NKIAKIPDSLCALEQLTEL-YMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPDSLCAL 213

Query: 457 -ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
             L++L + + ++  ++P  +   KS+  L+ ++  N  ++PD +  LE L  L ++  A
Sbjct: 214 EQLTELYM-EYNALTAIPDEIGKLKSMKILK-LNNNNIEKIPDSLCALEQLTELNVRYNA 271

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +  +P+ + +L S++ L LS NN+  IP+SL  L  L  L + ++ L  IP+ +  L S+
Sbjct: 272 LTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSM 331

Query: 576 KYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLR 607
           K LDL  +   +IP+ L +              T+IP E T L+
Sbjct: 332 KILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLK 375



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 15/195 (7%)

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTS 484
           +P ++G    L++L++    I ++P SL  L  L++L +   ++  ++P  +   K++  
Sbjct: 137 VPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMG-YNALTAIPDEIGKLKNMNI 195

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L +   K   ++PD +  LE L  L ++  A+  +P+ +G+L S++ L L++NN++ IP+
Sbjct: 196 LNLTFNK-IAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPD 254

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP-------- 596
           SL  L  L  L +  N L  IP+ +  L S+K LDL  NN+ +IP+ L +          
Sbjct: 255 SLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMG 314

Query: 597 ----TSIPSEFTSLR 607
               T+IP E T L+
Sbjct: 315 SDALTAIPDEITKLK 329



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 169/392 (43%), Gaps = 72/392 (18%)

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
           K+  CH    L L    I ++P S+  L  + EL +     L  I   I KL+ +  +  
Sbjct: 140 KIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYM-GYNALTAIPDEIGKLKNMNIL-- 196

Query: 236 HRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN 295
               NL F                           +   +P   C  + LT L  ++   
Sbjct: 197 ----NLTF--------------------------NKIAKIPDSLCALEQLTEL-YMEYNA 225

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              +PDE+G L+++  L ++   I ++P+ L  L  L++L ++  + L  I   I KLKS
Sbjct: 226 LTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVR-YNALTAIPDEITKLKS 284

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSL 415
           ++ +++S+                                 + +  +P SLC  + LT L
Sbjct: 285 MKILDLSS---------------------------------NNIAKIPDSLCALEQLTEL 311

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPS 474
             +    L  +PDE+  L++++ L +  +   ++P SL  L  L+KL +   ++  ++P 
Sbjct: 312 -YMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNM-HYNALTAIPD 369

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            +   KSL  L  ++  N  ++PD +  LE L  L +   A+  +P+ + +L S++ L L
Sbjct: 370 EITKLKSLKILN-LNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLKSMKTLNL 428

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           S N +  IP+SL  L  L  L + +N L  IP
Sbjct: 429 SFNKIAKIPDSLCALEQLTELDMMSNALTSIP 460


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 201/434 (46%), Gaps = 53/434 (12%)

Query: 286 TSLEIIDCPNF--ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           ++L   DC  +  E LP +  +   L  L +  +++  L  G  +   L +L+L +C+ L
Sbjct: 558 SNLRWFDCCKYPWESLPAKF-DPDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANL 616

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN--KCSKLES 401
              +     + ++E + +  CSNLK       C+            ++KLN   C  LES
Sbjct: 617 -MRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCS----------KKLIKLNLRDCKNLES 665

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL--ALS 459
             S +C ++SL  L +  C  LE+ P   G L+   E++V+ +GIR++P ++ Q   +L+
Sbjct: 666 F-SYVC-WESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLT 723

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
           +L L    +  +L   +   KSL  L++  C     LP+EIG+LE L++L    T I + 
Sbjct: 724 ELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQP 783

Query: 520 PESLGQLSSLEWLVLS--------DNNLQIIPESLNQ-LSSLVSLKLSNNNL--ERIPER 568
           P S+ +L+ L++L  +        ++ +  +   +NQ L SL +L LS  NL  E +P+ 
Sbjct: 784 PSSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFPPVNQGLCSLKTLNLSYCNLKDEGLPQD 843

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
           +  LSSL+ L+L  NN + +P+ L    +    +    +    L       P +L  I  
Sbjct: 844 IGSLSSLEVLNLRGNNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEF----PRQLDTIYA 899

Query: 629 DGWMKQSVNGETYITKSMY-------------FPGNE---IPKWFRHQSTGSTISLKTPQ 672
           D W   S+    +   S +                NE   IP+WF HQ    ++S+K P+
Sbjct: 900 D-WNNDSICNSLFQNISSFQHDICASDSLSLRVFTNEWKNIPRWFHHQGKDKSVSVKLPE 958

Query: 673 PTGY-NKLMGFAFC 685
                +  +GFA C
Sbjct: 959 NWYVCDNFLGFAVC 972



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 23/344 (6%)

Query: 44  TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           + LR+F+  ++P ++L      + LV L +  S +  LW   +    L+R+DL     L 
Sbjct: 558 SNLRWFDCCKYPWESLPAKFDPDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANLM 617

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
           + PD +   NLE L L  CS+L E H S++   KL  L+L  CK+L S  + +  + L+ 
Sbjct: 618 RTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESF-SYVCWESLEC 676

Query: 163 LVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEELPSS-IKCLSNIGELLIYSCKRLENI 220
           L L+GCSNL+  P++         + +   GI +LPS+ I+  S++ EL +   K L  +
Sbjct: 677 LHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATL 736

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG--------TRSKEQPSSELKLKKCPRP 272
           S SI +L+ L  +++  C  L+ L     +++         T   + PSS ++L    R 
Sbjct: 737 SCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLN---RL 793

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLA 330
           + L   +   KS   LE  D  +F   P   G L +L  L +    +++  LP+ +G L+
Sbjct: 794 KFLTFAKQ--KSEVGLE--DEVHFVFPPVNQG-LCSLKTLNLSYCNLKDEGLPQDIGSLS 848

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            L  L L+  +  E++  S+ +L S++S+++ +C +L   PE P
Sbjct: 849 SLEVLNLRG-NNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFP 891


>gi|40846341|gb|AAR92462.1| SNC1-like protein [Arabidopsis thaliana]
          Length = 1052

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 191/414 (46%), Gaps = 85/414 (20%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           +L++  W+  PLK L +    E LV L M  S + +LWD  Q+L SLK ++L+YS  L +
Sbjct: 583 KLKWLWWNDCPLKRLPSNFKAEYLVELIMVNSDLEKLWDGTQSLGSLKEMNLRYSTNLKE 642

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           +PDLSLA N                        LE LD+  C+ L S PT ++S+ L  L
Sbjct: 643 IPDLSLAIN------------------------LERLDISDCEVLESFPTPLNSESLAYL 678

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L GC NL+N P                 I+   S++  L    ++++  C   +N    
Sbjct: 679 NLTGCPNLRNFP----------------AIKMGCSNVDFLQE-RKIVVKDCFWNKN---- 717

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L +L+ +R  RC   +F             + +   +L L+   + E L  G    +
Sbjct: 718 LLGLDYLDCLR--RCNPRKF-------------RPEHLKDLTLRGNNKLEKLWEGVQSLE 762

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           SL ++++ +C N   +PD L     L  L ++   ++  LP  +G L  L + E+K C+ 
Sbjct: 763 SLVTMDLSECENLTEIPD-LSKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTG 821

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPS--------SV 390
           LE + +++  L S++ +++  CS+L+ FP     I +  ++ + IE +P         +V
Sbjct: 822 LEVLPTAV-NLSSLKILDLGGCSSLRTFPLISTNIVWLYLENTAIEEVPCCIENFSGLNV 880

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           L +  C +L+++  ++   +SL   +  +C+         G ++AL +  V  T
Sbjct: 881 LLMYCCQRLKNISPNIFRLRSLFFADFTNCR---------GVIKALSDATVVAT 925



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 115/499 (23%), Positives = 205/499 (41%), Gaps = 108/499 (21%)

Query: 275  LPSGQCMF-KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
            LP+G     + L  L   DCP  +RLP      + L  LI+  + + +L +G   L  L 
Sbjct: 573  LPNGLVYLPRKLKWLWWNDCP-LKRLPSNF-KAEYLVELIMVNSDLEKLWDGTQSLGSLK 630

Query: 334  KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP------EIPFCNIDG-SGIERI 386
            ++ L+  + L+ I      + ++E ++IS+C  L+ FP       + + N+ G   +   
Sbjct: 631  EMNLRYSTNLKEIPDLSLAI-NLERLDISDCEVLESFPTPLNSESLAYLNLTGCPNLRNF 689

Query: 387  PSSVLKLNKCSKLESLPSSL-----CMF-KSLTSLEIIDC-------------------- 420
            P+  +K+  CS ++ L         C + K+L  L+ +DC                    
Sbjct: 690  PA--IKMG-CSNVDFLQERKIVVKDCFWNKNLLGLDYLDCLRRCNPRKFRPEHLKDLTLR 746

Query: 421  --KKLERLPDELGNLEALEELRV-EGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
               KLE+L + + +LE+L  + + E   + E+P       L  LKL  C S  +LP+ + 
Sbjct: 747  GNNKLEKLWEGVQSLESLVTMDLSECENLTEIPDLSKATNLENLKLNNCKSLVTLPTTIG 806

Query: 478  VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLSD 536
              + L   E+ +C     LP  + NL  LK+L + G +++R  P      +++ WL L +
Sbjct: 807  NLQKLVRFEMKECTGLEVLPTAV-NLSSLKILDLGGCSSLRTFPLIS---TNIVWLYLEN 862

Query: 537  NNLQIIPESLNQLSSL-VSLKLSNNNLERIPERLDPLSSLKYLDLFEN------------ 583
              ++ +P  +   S L V L      L+ I   +  L SL + D F N            
Sbjct: 863  TAIEEVPCCIENFSGLNVLLMYCCQRLKNISPNIFRLRSLFFAD-FTNCRGVIKALSDAT 921

Query: 584  NLDRIPEYLRSFPTSIPSEFTSLRL----------------------------------S 609
             +  + +++   P S   E+T  R                                   +
Sbjct: 922  VVATMEDHVSCVPLSENIEYTCERFWDAFYDEGYLIDENDDNDENDDLEYLVDWEFEGEN 981

Query: 610  VDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK 669
               RNC KL+ +    I++  +            K +  PG EIPK+F ++++G ++++ 
Sbjct: 982  FSFRNCFKLERDARELILRSCF------------KPVALPGGEIPKYFTYRASGDSLTVT 1029

Query: 670  TPQPTGYNKLMGFAFCVVV 688
             PQ +   +   F  CVVV
Sbjct: 1030 LPQSSLSQEFKRFKACVVV 1048


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 161/317 (50%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I KL++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGKLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 176/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGKLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++ + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +  +L++  +   
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLTTLPENIGQLQRL-QTLY 331

Query: 275 LPSGQCMF-----KSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
           L + Q  F     + L +LE +D  +     LP E+G LQ L  L +    +  LPE + 
Sbjct: 332 LGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|297840113|ref|XP_002887938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333779|gb|EFH64197.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 965

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 156/305 (51%), Gaps = 28/305 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLK 57
           +S + +++ I+   F ++  L+ L    ++      +H  E + F  +LR   W  +P K
Sbjct: 533 ISTLLNDVYISAEAFKRIRNLQFLSIYKTRFDTNVRLHLSEDMVFPPQLRLLHWEVYPGK 592

Query: 58  TL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
            L +    E LV L +  +++ +LW+ +Q L +LK+++L  S  L +LPDLS A NLE+L
Sbjct: 593 CLPHTFRPEYLVELNLRDNQLEKLWEGIQPLTNLKKMELLRSCHLKELPDLSDATNLEVL 652

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C SL E   S   L+KLE L +D C+ L  +PT  +   L+ L + GC  LK +P 
Sbjct: 653 NLARCESLVEIPPSFGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLGMMGCWQLKKIPD 712

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           +++    +TL +    +E+L  SI+  S +  L IY    + + ++ I    +LE     
Sbjct: 713 ISTN--ITTLSMTDTMLEDLTESIRLWSGLQVLDIYGSVNIYHATAEI----YLEG---- 762

Query: 237 RCPNLQFLEMPSC--NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           R  +++  ++P C  ++DG +       EL +  CP+  SLP    +  SL  L +  C 
Sbjct: 763 RGADIE--KIPYCIKDLDGLK-------ELHIYGCPKIASLPE---LPSSLKRLIVDTCE 810

Query: 295 NFERL 299
           + E L
Sbjct: 811 SLETL 815



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 176/411 (42%), Gaps = 63/411 (15%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALEELRVEG 443
           P  +++LN + ++LE L   +    +L  +E++    L+ LPD  +  NLE L   R E 
Sbjct: 600 PEYLVELNLRDNQLEKLWEGIQPLTNLKKMELLRSCHLKELPDLSDATNLEVLNLARCES 659

Query: 444 TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
             + E+P S   L  L KL +  C   + +P+   ++ SL SL ++ C    ++PD   N
Sbjct: 660 --LVEIPPSFGNLHKLEKLIMDFCRKLKVVPTHFNLA-SLESLGMMGCWQLKKIPDISTN 716

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           +     L++  T + ++ ES+   S L+ L +  +       ++   ++ + L+    ++
Sbjct: 717 I---TTLSMTDTMLEDLTESIRLWSGLQVLDIYGS------VNIYHATAEIYLEGRGADI 767

Query: 563 ERIPERLDPLSSLKYLDLFE----NNLDRIPEYLR--------SFPTSIPSEFTSLRLSV 610
           E+IP  +  L  LK L ++      +L  +P  L+        S  T +P  F S    +
Sbjct: 768 EKIPYCIKDLDGLKELHIYGCPKIASLPELPSSLKRLIVDTCESLETLVPFPFESAIEDL 827

Query: 611 DLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKT 670
              NC KL   E   +I     KQS        +  + PG  +P  F H++ G+  SL  
Sbjct: 828 YFSNCFKLG-QEARRVI----TKQS--------RDAWLPGRNVPAEFHHRAVGN--SLTI 872

Query: 671 PQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLG 730
           P  T   ++     CVV++       + + VE       FD++C +R  G  S     L 
Sbjct: 873 PSDTYECRI-----CVVIS------PKQKMVE------YFDLLCRQRKNGI-STGQKRLQ 914

Query: 731 KISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHAQ 781
            +  V+++H+F+G   F   +         F        + +CGI   H  
Sbjct: 915 LLPKVQAEHLFIGH--FTLSDKLDSGVLLEFSTSSKDIAIIECGIQIFHGH 963


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 164/352 (46%), Gaps = 40/352 (11%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP+      SL  L +ID      +P E+G L +L+ L +    +  +P  +GQL  L 
Sbjct: 58  SLPAEIGQLASLEWLCLIDN-QLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLG 116

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L L N            +L SV + EI   + LKG       ++  + +  +P+ V +L
Sbjct: 117 LLGLDNN-----------QLSSVPA-EIGRLTALKGL------DLQKNQLTSVPAEVGQL 158

Query: 394 N-------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
                   + ++L S+P+ +    SL  L + D  +L  +P E+  L +L EL +E   +
Sbjct: 159 TSLEALRLQHNRLTSVPAEIGQLASLEKLYVAD-NQLTSMPAEIWRLTSLRELYLEDNRL 217

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
             +P  + QLAL K      +    LP+ +    SL  L +   +    +P EIG L  L
Sbjct: 218 TSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQ-LTSVPAEIGQLMSL 276

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
           + L ++G  +  VP  +GQL+SL+ L LS N L  +P  + QL+ L  L LS N L  +P
Sbjct: 277 RELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLP 336

Query: 567 ERLDPLSSLKYLDLFENNLDRIPE---YLRSFP---------TSIPSEFTSL 606
             +  L SL+ LDL +N L  +P     LRS           TS+P+E   L
Sbjct: 337 AEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL 388



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 231/541 (42%), Gaps = 113/541 (20%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH- 128
           L + G+++T +  ++  L SL+R+ L  ++L T +P           ++G  +SLTE + 
Sbjct: 3   LNLSGNQLTSVPAEIGQLTSLERLCLNDNQL-TSVPA----------EIGRLASLTELYL 51

Query: 129 ---------SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
                    + I  L  LE L L   + LTS+P  I     +   L G    KN  ++TS
Sbjct: 52  EDNQLTSLPAEIGQLASLEWLCLIDNQ-LTSVPAEIG----QLASLDGLYLGKN--QLTS 104

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
                            P+ I  L+++G LL     +L ++ + I +L  L+ + + +  
Sbjct: 105 V----------------PAEIGQLTSLG-LLGLDNNQLSSVPAEIGRLTALKGLDLQKN- 146

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
             Q   +P+  +    S E     L+L+   R  S+P+      SL  L + D      +
Sbjct: 147 --QLTSVPA-EVGQLTSLE----ALRLQHN-RLTSVPAEIGQLASLEKLYVADN-QLTSM 197

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+  L +L  L ++   +  LP  +GQLALL +L L N +EL  + + I +L S+  +
Sbjct: 198 PAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWL-NDNELTGLPAEIGQLTSLRGL 256

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
            +             + N                    +L S+P+ +    SL  L  + 
Sbjct: 257 YL-------------YGN--------------------QLTSVPAEIGQLMSLREL-YLQ 282

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVS 479
             +L  +P E+G L +L+ L + G  +  VP  + QL          +   SLP+ +   
Sbjct: 283 GNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQL 342

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT------------AIRE--------- 518
            SL  L++ D +    +P EIG L  L+ L + G              +RE         
Sbjct: 343 MSLRLLDLDDNR-LASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQLTVRELYLENNQLT 401

Query: 519 -VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            VP  +GQL++LE L LS N L  +P  +  L+SL  L L+ N L  +P  +  L+SL+ 
Sbjct: 402 SVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTSLRL 461

Query: 578 L 578
           L
Sbjct: 462 L 462



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 68/140 (48%), Gaps = 16/140 (11%)

Query: 482 LTSLEIIDCKN---FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
           LTSLE + C N      +P EIG L  L  L ++   +  +P  +GQL+SLEWL L DN 
Sbjct: 20  LTSLERL-CLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQ 78

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP-- 596
           L  +P  + QL+SL  L L  N L  +P  +  L+SL  L L  N L  +P  +      
Sbjct: 79  LTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTAL 138

Query: 597 ----------TSIPSEFTSL 606
                     TS+P+E   L
Sbjct: 139 KGLDLQKNQLTSVPAEVGQL 158



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 16/131 (12%)

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
           VL + G  +  VP  +GQL+SLE L L+DN L  +P  + +L+SL  L L +N L  +P 
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA 61

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNC 615
            +  L+SL++L L +N L  +P  +                TS+P+E   L  S+ L   
Sbjct: 62  EIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLT-SLGL--- 117

Query: 616 LKLDPNELSEI 626
           L LD N+LS +
Sbjct: 118 LGLDNNQLSSV 128



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 190/454 (41%), Gaps = 69/454 (15%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
           L  L +  +++T L  ++  L SL+ + L  ++L +   ++    +L+ L LG  + LT 
Sbjct: 46  LTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGK-NQLTS 104

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTL 186
             + I  L  L +L LD  + L+S+P  I     +   L+G    KN  ++TS       
Sbjct: 105 VPAEIGQLTSLGLLGLDNNQ-LSSVPAEIG----RLTALKGLDLQKN--QLTSV------ 151

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
                     P+ +  L+++ E L     RL ++ + I +L  LE  +++   N Q   M
Sbjct: 152 ----------PAEVGQLTSL-EALRLQHNRLTSVPAEIGQLASLE--KLYVADN-QLTSM 197

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRP-----------------ESLPSGQCMFKSLTSLE 289
           P+     T  +E    + +L   P                     LP+      SL  L 
Sbjct: 198 PAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLY 257

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +        +P E+G L +L  L + G  +  +P  +GQL  L  L L   ++L  + + 
Sbjct: 258 LYGN-QLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSG-NQLTSVPAE 315

Query: 350 IFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKL--- 399
           I +L  +  +++S  + L   P        +   ++D + +  +P+ + +L    +L   
Sbjct: 316 IGQLTFLGCLDLS-YNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLN 374

Query: 400 ----ESLPSSLCMFKSLTSLEI-IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
                S+P+       LT  E+ ++  +L  +P E+G L ALE+L +    +  VP  + 
Sbjct: 375 GNLLTSVPAE---IGQLTVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIG 431

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII 488
            L   +  L   +   S+P  +     LTSL ++
Sbjct: 432 LLTSLRWLLLNGNQLTSVPGEI---GQLTSLRLL 462


>gi|17549096|ref|NP_522436.1| POPC protein [Ralstonia solanacearum GMI1000]
 gi|20139269|sp|Q9RBS2.2|POPC_RALSO RecName: Full=Protein PopC
          Length = 1024

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 192/436 (44%), Gaps = 55/436 (12%)

Query: 166 RGCSNLKNLPKMT--SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           R   +LK++ +M+  S  L+S LP     + ELP     ++++  L    C  L  + ++
Sbjct: 190 RAVDHLKSVLRMSGDSVQLKS-LP-----VPELPDVTFEIAHLKNLETVDCD-LHALPAT 242

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  LE++ +    N  F  +P         +E   SE  LK  P     P G     
Sbjct: 243 LENLFLLETLSLKGAKN--FKALPDAVWRLPALQELKLSETGLKSLP-----PVGGG--S 293

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I D P  E+LP    +L  L  L +  T + +L  G+GQL  L  L L++  +L
Sbjct: 294 ALQRLTIEDSP-LEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 352

Query: 344 EYISSSIFKLKSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS---- 397
           E +  S+ +++ +  I   I    +  G   +    +D S + ++P+    L   +    
Sbjct: 353 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAKLPADFGALGNLAHVSL 412

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              KL  LP+S+    +L +L + D  KL  LP   G L  L+EL + G  I E+P    
Sbjct: 413 SNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELP---- 468

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                   +   SS ++L               +D      LP + G L  L  L++  T
Sbjct: 469 -------SMGGASSLQTL--------------TVDDTALAGLPADFGALRNLAHLSLSNT 507

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            +RE+P + G L +L+ L L  N  L  +P SL  LS L  L L N+++  +P  + P S
Sbjct: 508 QLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPP-MGPGS 566

Query: 574 SLKYLDLFENNLDRIP 589
           +LK L +  + L  IP
Sbjct: 567 ALKTLTVENSPLTSIP 582



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 4/149 (2%)

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P    ++A L  L+   C    +LP+ L     L +L +   KNF  LPD +  L 
Sbjct: 213 VPELPDVTFEIAHLKNLETVDCD-LHALPATLENLFLLETLSLKGAKNFKALPDAVWRLP 271

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L +  T ++ +P  +G  S+L+ L + D+ L+ +P     L  L SL LSN  LE+
Sbjct: 272 ALQELKLSETGLKSLPP-VGGGSALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEK 330

Query: 565 IPERLDPLSSLKYLDLFEN-NLDRIPEYL 592
           +   +  L +LK L L +N  L+R+P+ L
Sbjct: 331 LSSGIGQLPALKSLSLQDNPKLERLPKSL 359



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 46/312 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
            + SL+++ +  S L  KLP D     NL  + L   + L +  +SI  L  L+ L L  
Sbjct: 380 GMSSLQKLTVDNSSL-AKLPADFGALGNLAHVSL-SNTKLRDLPASIGNLFTLKTLSLQD 437

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
              L SLP S      L+ L L G + +  LP M       TL +    +  LP+    L
Sbjct: 438 NPKLGSLPASFGQLSGLQELTLNG-NRIHELPSMGGASSLQTLTVDDTALAGLPADFGAL 496

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--NIDGTRSKEQPS 261
            N+  L + S  +L  + ++   L  L+++ +    N Q   +PS    + G        
Sbjct: 497 RNLAHLSL-SNTQLRELPANTGNLHALKTLSLQG--NQQLATLPSSLGYLSGL------- 546

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG-NLQALNRLIIDGTAIR 320
            EL LK     E  P G     +L +L + + P    +P ++G   + L +L +  T +R
Sbjct: 547 EELTLKNSSVSELPPMGPG--SALKTLTVENSP-LTSIPADIGIQCERLTQLSLSNTQLR 603

Query: 321 ELPEGLGQLALLSKLELKNCSELEYIS-------------------------SSIFKLKS 355
            LP  +G+L+ L  L LKN + LE +S                         SSI KL  
Sbjct: 604 ALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGLPSSIGKLPK 663

Query: 356 VESIEISNCSNL 367
           + ++++S C+ L
Sbjct: 664 LRTLDLSGCTGL 675


>gi|333999498|ref|YP_004532110.1| small GTP-binding protein [Treponema primitia ZAS-2]
 gi|333739539|gb|AEF85029.1| small GTP-binding protein [Treponema primitia ZAS-2]
          Length = 570

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 256/544 (47%), Gaps = 79/544 (14%)

Query: 63  HWENLVS---LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL------------ 107
           HW+ L     +++ G  +T + D ++NL +L  + ++ S  + K+P+             
Sbjct: 43  HWDELAQFTHIELCGENITIIPDCIKNLPALNSMTIR-STGIKKMPEWTGKLSSLNFYDL 101

Query: 108 ---SLAQNLEILD-LGYCSS-----------LTETHSSIQYLNKLEVLDLDRCKSLTSLP 152
              SLA   E  D L + ++           LT     ++ LNKL+++ L     +T +P
Sbjct: 102 TNESLASLFESFDDLWFTTTSITELTLHGEGLTVFPDRLKILNKLKIVYLWNT-GITQIP 160

Query: 153 TSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELL 210
             I S K L++L + G + ++ LP+ + +      L L  + I ++P  I  L+ +  L 
Sbjct: 161 VWIQSLKLLEKLSI-GVAEIRTLPEWLANFPCLKELDLYNLKITKIPEWIGNLNKLETLS 219

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP 270
           I  C  + ++  SI KL  L+ +RI          +  C   G  S E+  +  +     
Sbjct: 220 INLCP-ISDLPVSIGKLGMLKKLRI----------IQPC--IGRYSSEESLAAFRNFTVS 266

Query: 271 RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
            P S+    C   SL  +++ +CP  E LPD + NL  L  L +  T I+ LPE +G+L+
Sbjct: 267 LPYSI--NDC--TSLREIDLHECPIIE-LPD-ISNLTQLTNLDLRSTEIKVLPESIGKLS 320

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-S 389
            L  L+L   S++E +  SI +L ++ ++++S  S++   PE          I  + S  
Sbjct: 321 QLITLDLSG-SKIEVLPDSIGRLTNLTNLDLS-YSSIMALPE---------SIGNLASLK 369

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDC---------KKLERLPDELGNLEALEELR 440
            L LN    L  LP ++     L++L+++D          K +  LP+ +G L +L+ L 
Sbjct: 370 KLNLNNTRNLRILPETI---GDLSALQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLL 426

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
           +  + I  +P+S+ +L+  K+     +    LP  +    SL  L +   K    LP  I
Sbjct: 427 LNDSDISSLPESIGELSSLKILYLNDTPITELPQSMEKLCSLEKLNLNGVK-ITELPLSI 485

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           GN++ LK+L +K T I  +P+S   LSSLE L LS   +   PE +++LS+L S + SN 
Sbjct: 486 GNMKSLKILLLKDTDISSLPDSFVYLSSLEKLDLSGTKITHFPECISKLSTLASFRFSNG 545

Query: 561 NLER 564
             E 
Sbjct: 546 AFEE 549



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 173/342 (50%), Gaps = 28/342 (8%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +LP     F  L  L++ +     ++P+ +GNL  L  L I+   I +LP  +G+L +L 
Sbjct: 181 TLPEWLANFPCLKELDLYNL-KITKIPEWIGNLNKLETLSINLCPISDLPVSIGKLGMLK 239

Query: 334 KLELKNCSELEYISS---SIFKLKSVE-SIEISNCSNLK--GFPEIPFCNI-DGSGIERI 386
           KL +       Y S    + F+  +V     I++C++L+     E P   + D S + ++
Sbjct: 240 KLRIIQPCIGRYSSEESLAAFRNFTVSLPYSINDCTSLREIDLHECPIIELPDISNLTQL 299

Query: 387 PSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
            +  L+    ++++ LP S+     L +L++    K+E LPD +G L  L  L +  + I
Sbjct: 300 TNLDLR---STEIKVLPESIGKLSQLITLDL-SGSKIEVLPDSIGRLTNLTNLDLSYSSI 355

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL--------- 496
             +P+S+  LA L KL L    +   LP  +     L++L+++D  +F  L         
Sbjct: 356 MALPESIGNLASLKKLNLNNTRNLRILPETI---GDLSALQVLDIGSFFSLHNEKTITIL 412

Query: 497 PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
           P+ IG L  LKVL +  + I  +PES+G+LSSL+ L L+D  +  +P+S+ +L SL  L 
Sbjct: 413 PETIGRLRSLKVLLLNDSDISSLPESIGELSSLKILYLNDTPITELPQSMEKLCSLEKLN 472

Query: 557 LSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE---YLRSF 595
           L+   +  +P  +  + SLK L L + ++  +P+   YL S 
Sbjct: 473 LNGVKITELPLSIGNMKSLKILLLKDTDISSLPDSFVYLSSL 514



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 5/159 (3%)

Query: 426 LPDELGNLEALEELRVEGTGIREVPK---SLAQLALSKLKLKKCSS-FESLPSRLYVSKS 481
           +PD + NL AL  + +  TGI+++P+    L+ L    L  +  +S FES     + + S
Sbjct: 63  IPDCIKNLPALNSMTIRSTGIKKMPEWTGKLSSLNFYDLTNESLASLFESFDDLWFTTTS 122

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           +T L +   +     PD +  L  LK++ +  T I ++P  +  L  LE L +    ++ 
Sbjct: 123 ITELTL-HGEGLTVFPDRLKILNKLKIVYLWNTGITQIPVWIQSLKLLEKLSIGVAEIRT 181

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           +PE L     L  L L N  + +IPE +  L+ L+ L +
Sbjct: 182 LPEWLANFPCLKELDLYNLKITKIPEWIGNLNKLETLSI 220



 Score = 45.8 bits (107), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 32/301 (10%)

Query: 44  TELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           T LR  + H+ P+  L +I +   L +L +  +++  L + +  L  L  +DL  SK+  
Sbjct: 275 TSLREIDLHECPIIELPDISNLTQLTNLDLRSTEIKVLPESIGKLSQLITLDLSGSKI-E 333

Query: 103 KLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
            LPD +    NL  LDL Y SS+     SI  L  L+ L+L+  ++L  LP +I      
Sbjct: 334 VLPDSIGRLTNLTNLDLSY-SSIMALPESIGNLASLKKLNLNNTRNLRILPETIGDLSAL 392

Query: 162 RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
           +++        ++    S H   T+ +       LP +I  L ++ ++L+ +   + ++ 
Sbjct: 393 QVL--------DIGSFFSLHNEKTITI-------LPETIGRLRSL-KVLLLNDSDISSLP 436

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK-KCPRPESLPSGQC 280
            SI +L  L+ + ++  P     E+P       +S E+  S  KL     +   LP    
Sbjct: 437 ESIGELSSLKILYLNDTP---ITELP-------QSMEKLCSLEKLNLNGVKITELPLSIG 486

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             KSL  L + D  +   LPD    L +L +L + GT I   PE + +L+ L+     N 
Sbjct: 487 NMKSLKILLLKDT-DISSLPDSFVYLSSLEKLDLSGTKITHFPECISKLSTLASFRFSNG 545

Query: 341 S 341
           +
Sbjct: 546 A 546


>gi|226237535|dbj|BAH47282.1| type III effector protein [Ralstonia solanacearum]
          Length = 984

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 212/483 (43%), Gaps = 74/483 (15%)

Query: 166 RGCSNLKNLPKMT--SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           R   +LK++ +M+  S  L+S LP     + ELP     ++++  L    C  L  + ++
Sbjct: 150 RAVDHLKSVLRMSGDSVQLKS-LP-----VPELPDVTFEIAHLKNLETVDCD-LHALPAT 202

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  LE++ +    NL+ L  P         +E   SE  LK  P     P G     
Sbjct: 203 LENLFLLETLSLKGAKNLKAL--PDAVWRLPALQELKLSETGLKSLP-----PVGGG--S 253

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I D P  E+LP    +L  L  L +  T + +L  G+GQL  L  L L++  +L
Sbjct: 254 ALQRLTIEDSP-LEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 312

Query: 344 EYISSSIFKLKSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS---- 397
           E +  S+ +++ +  I   I    +  G   +    +D S + ++P+    L   +    
Sbjct: 313 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAKLPADFGALGNLAHVSL 372

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              KL  LP+S+    +L +L + D  KL  LP   G L  L+EL + G  I E+P    
Sbjct: 373 SNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELP---- 428

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                   +   SS ++L               +D      LP + G L  L  L++  T
Sbjct: 429 -------SMGGASSLQTL--------------TVDDTALAGLPADFGALRNLAHLSLSNT 467

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            +RE+P + G L +L+ L L  N  L  +P SL  LS L  L L N+++  +P  + P S
Sbjct: 468 QLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPP-MGPGS 526

Query: 574 SLKYLDLFENNLDRIPE-----------------YLRSFPTSIPSEFTSLRLSVDLRNCL 616
           +LK L +  + L  IP                   LR+ P+SI  + ++L+  + L+N  
Sbjct: 527 ALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSI-GKLSNLK-GLTLKNNA 584

Query: 617 KLD 619
           +L+
Sbjct: 585 RLE 587



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 213/505 (42%), Gaps = 117/505 (23%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYL-KRLVLRGCSNLKNLP------------KM 177
           I +L  LE +D D    L +LP ++ + +L + L L+G  NLK LP            K+
Sbjct: 183 IAHLKNLETVDCD----LHALPATLENLFLLETLSLKGAKNLKALPDAVWRLPALQELKL 238

Query: 178 TSCHLRSTLPLLGVG------------IEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
           +   L+S LP +G G            +E+LP+    L  +  L + + K LE +SS I 
Sbjct: 239 SETGLKS-LPPVGGGSALQRLTIEDSPLEQLPAGFADLDQLASLSLSNTK-LEKLSSGIG 296

Query: 226 KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
           +L  L+S+ +   P L+ L      ++          EL L    R  +LPS   M  SL
Sbjct: 297 QLPALKSLSLQDNPKLERLPKSLGQVE----------ELTLIGG-RIHALPSASGM-SSL 344

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             L  +D  +  +LP + G L  L  + +  T +R+LP  +G L  L  L L++  +L  
Sbjct: 345 QKL-TVDNSSLAKLPADFGALGNLAHVSLSNTKLRDLPASIGNLFTLKTLSLQDNPKLGS 403

Query: 346 ISSSIFKLKSVESI-----EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS--- 397
           + +S  +L  ++ +      I    ++ G   +    +D + +  +P+    L   +   
Sbjct: 404 LPASFGQLSGLQELTLNGNRIHELPSMGGASSLQTLTVDDTALAGLPADFGALRNLAHLS 463

Query: 398 ----KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP--- 450
               +L  LP++     +L +L +   ++L  LP  LG L  LEEL ++ + + E+P   
Sbjct: 464 LSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPPMG 523

Query: 451 --------------------------KSLAQLALSKLKLK-------KCSSFESLP---- 473
                                     + L QL+LS  +L+       K S+ + L     
Sbjct: 524 PGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNN 583

Query: 474 SRLYV-----SKSLTSLEIID---CKNFMRLPDEIGNLEYLKVLTIK---GTAIREVPES 522
           +RL +      + L S+  ID   C     LP  IGNL  L+ L +    G ++  +P S
Sbjct: 584 ARLELLSESGVRKLESVRKIDLSGCVRLTGLPSSIGNLPKLRTLDLSGCTGLSMASLPRS 643

Query: 523 LGQLSSLEWLVLSDNNLQII-PESL 546
                    LVL  + L +I PE L
Sbjct: 644 ---------LVLPRDGLNVIFPEHL 659



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 201/494 (40%), Gaps = 101/494 (20%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +L+     + P  T  I H +NL ++      +  L   ++NL  L+ + LK +K L  L
Sbjct: 167 QLKSLPVPELPDVTFEIAHLKNLETVDC---DLHALPATLENLFLLETLSLKGAKNLKAL 223

Query: 105 PD----LSLAQNLEILDLGYCS-SLTETHSSIQYL----NKLEVL-----DLDRCKSLTS 150
           PD    L   Q L++ + G  S       S++Q L    + LE L     DLD+  SL+ 
Sbjct: 224 PDAVWRLPALQELKLSETGLKSLPPVGGGSALQRLTIEDSPLEQLPAGFADLDQLASLSL 283

Query: 151 LPTSIHS--------KYLKRLVLRGCSNLKNLPK-----------------MTSCHLRST 185
             T +            LK L L+    L+ LPK                 + S    S+
Sbjct: 284 SNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQVEELTLIGGRIHALPSASGMSS 343

Query: 186 LPLLGV---GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
           L  L V    + +LP+    L N+  + + + K L ++ +SI  L  L+++ +   P L 
Sbjct: 344 LQKLTVDNSSLAKLPADFGALGNLAHVSLSNTK-LRDLPASIGNLFTLKTLSLQDNPKLG 402

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS--GQCMFKSLTSLEIIDCPNFERLP 300
            L      + G +       EL L    R   LPS  G    ++LT    +D      LP
Sbjct: 403 SLPASFGQLSGLQ-------ELTLNGN-RIHELPSMGGASSLQTLT----VDDTALAGLP 450

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            + G L+ L  L +  T +RELP   G L  L  L L+   +L  + SS+  L  +E + 
Sbjct: 451 ADFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELT 510

Query: 361 ISNCSNLKGFPEIPFC-----NIDGSGIERIPSSVL----KLNKCS----KLESLPSSLC 407
           + N S  +  P  P        ++ S +  IP+ +     +L + S    +L +LPSS+ 
Sbjct: 511 LKNSSVSELPPMGPGSALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSIG 570

Query: 408 MFKSLTSLEI----------------------ID---CKKLERLPDELGNLEALEELRVE 442
              +L  L +                      ID   C +L  LP  +GNL  L  L + 
Sbjct: 571 KLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGLPSSIGNLPKLRTLDLS 630

Query: 443 G-TG--IREVPKSL 453
           G TG  +  +P+SL
Sbjct: 631 GCTGLSMASLPRSL 644


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 185/379 (48%), Gaps = 34/379 (8%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           LP       +LT+   +     ++LPD +GNL  L  +I+ G  + ELPE + +L  L+ 
Sbjct: 131 LPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLTN 190

Query: 335 LELKNCSELEYISSSIFKLKSVESIEIS---------NCSNLKGFPEIPFCNIDGSGIER 385
           L L + ++L  +  SI  L  + S+ +S         +  NL+   E+      G+ +  
Sbjct: 191 LSLSD-NKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLA---GNNLTE 246

Query: 386 IPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           +P  +  L   + L     S  + K+  S E  D   L++LP+ +GNL+ L+   +  T 
Sbjct: 247 VPECIGNLINLTSLSLGSGSRGVLKT-KSPESNDT--LKKLPESIGNLKMLKSFSIGSTQ 303

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + ++P+S+  L  L +L L+     E LP  +     L  L +      ++LPD IGNL 
Sbjct: 304 LTKLPESIGNLTNLRELFLENNQLIE-LPESIGNLTKLDDLRL-SYNQLIKLPDCIGNLT 361

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            LK + ++   + ++PES+G +++L  L LSDN L  +PESL  L+ L  L+L++N L  
Sbjct: 362 KLKRIILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVE 421

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDL 612
           IPE +  L+ L  L + +N +  +PE + +              T +P  F  L+   DL
Sbjct: 422 IPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDL 481

Query: 613 R---NCLKLDPNELSEIIK 628
               N +K  P ELS +IK
Sbjct: 482 YLNSNPIKYLPAELSHLIK 500



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 163/356 (45%), Gaps = 63/356 (17%)

Query: 285 LTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           L +L  +D  N    +LP+ +GNL  L  L +    + +LPE +G+L  L+     + ++
Sbjct: 92  LINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDLPESIGRLTNLTNSLWLSNNQ 151

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS----- 397
           L+ +  SI            N SNL G        + G+ +  +P S+ KL   +     
Sbjct: 152 LKKLPDSI-----------GNLSNLTGII------LSGNQLTELPESISKLINLTNLSLS 194

Query: 398 --KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
             KL  LP S+     L SL  +   +L +LP  +GNL  L EL + G  + EVP+ +  
Sbjct: 195 DNKLNILPESIGNLTKLRSL-TLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPECIGN 253

Query: 456 LA-LSKLKLKKCS-------------SFESLPSRLYVSKSLTSLEI-------------- 487
           L  L+ L L   S             + + LP  +   K L S  I              
Sbjct: 254 LINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPESIGN 313

Query: 488 --------IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL 539
                   ++    + LP+ IGNL  L  L +    + ++P+ +G L+ L+ ++L +N L
Sbjct: 314 LTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQL 373

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
             +PES+  +++LV L+LS+N L ++PE L  L+ L+YL L  N L  IPE + + 
Sbjct: 374 IDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIGNL 429



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 29/234 (12%)

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
           + ++L  +P  +    +LT L++ +  +L +LP+ +GNL  L +L ++   + ++P+S+ 
Sbjct: 78  RHNQLTEVPDYIGKLINLTCLDLSN-NQLTKLPESIGNLTRLTDLYLQFNKLSDLPESIG 136

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           +L              +L + L++S +             +LPD IGNL  L  + + G 
Sbjct: 137 RLT-------------NLTNSLWLSNN----------QLKKLPDSIGNLSNLTGIILSGN 173

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            + E+PES+ +L +L  L LSDN L I+PES+  L+ L SL LS N L ++P+ +  L  
Sbjct: 174 QLTELPESISKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRK 233

Query: 575 LKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
           L  L L  NNL  +PE + +         TSL L    R  LK    E ++ +K
Sbjct: 234 LSELSLAGNNLTEVPECIGNL-----INLTSLSLGSGSRGVLKTKSPESNDTLK 282



 Score = 42.7 bits (99), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L ++   + EVP+ +G+L +L  L LS+N L  +PES+  L+ L  L L  N L  +PE 
Sbjct: 75  LDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDLPES 134

Query: 569 LDPLSSL-KYLDLFENNLDRIPEYLRSF 595
           +  L++L   L L  N L ++P+ + + 
Sbjct: 135 IGRLTNLTNSLWLSNNQLKKLPDSIGNL 162


>gi|297791251|ref|XP_002863510.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309345|gb|EFH39769.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1188

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 204/459 (44%), Gaps = 57/459 (12%)

Query: 353  LKSVESIEISNCSNLKGF---PEIPFCNIDG-SGIERIPSSV--------LKLNKCSKLE 400
            LK V+    SN ++L G    P +   N++G + ++ +P  +        L L  C+ L 
Sbjct: 653  LKWVDLSHSSNLNSLMGLLKAPNLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLL 712

Query: 401  SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LS 459
            SLP       SL +L +  C KL+   D +   E LE L + GT I  +P ++  L  L 
Sbjct: 713  SLPK--ITMDSLKTLILSGCSKLQTF-DVIS--EHLESLYLNGTSINGLPPAIGNLHRLI 767

Query: 460  KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
             L LK C +  +LP  L+  KSL  L++  C      PD    +E L+VL + GT+I E+
Sbjct: 768  LLNLKDCKNLATLPDCLWELKSLQELKLSRCSELKMFPDVKKKVESLRVLLLDGTSIAEM 827

Query: 520  PESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY 577
            P ++   S L  L LS N N++ +   + Q+  L  L+L    NL  +P           
Sbjct: 828  PGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLKWLELKWCKNLTSLP----------- 876

Query: 578  LDLFENNLDRIPEY----LRSF--PTSIPSEFTSLRLSVDLRNCLKLDPNELSEII---- 627
              +   NL  +  +    LR+   P ++P+    +  +    NC +L+    + II    
Sbjct: 877  --ILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTNCHELEQVSKNAIISYVQ 934

Query: 628  -KDGWMKQSVNGETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQP-TGYNKLMGF 682
             K   M        ++ KS+    FPG EIP WF HQS GS ++L+ PQ      K++G 
Sbjct: 935  KKSKLMSADRYNPDFVFKSLIGTCFPGCEIPAWFNHQSLGSVLTLELPQDWNAAGKIIGI 994

Query: 683  AFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH-VESDHVF 741
            A CVVV  S  E  R ++     KC           E +     S  G+ +H VESDH F
Sbjct: 995  ALCVVV--SFKE-YRDQNNSLQVKCTWEFTNVSLSPESFMVGGWSEPGEETHTVESDHTF 1051

Query: 742  LG-SSIFAGENSCKRSDE----FFFHIDRSCCEVKKCGI 775
            +  +S+   +N  +          F +     EV+KC +
Sbjct: 1052 ISYTSLLTIKNRQQFPSATEISLGFQVTNGTSEVEKCKV 1090



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 167/377 (44%), Gaps = 32/377 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS------KNKCMVHSLEGVPF---TELRYFEW 51
           MSK++ E  +    F  M+ LR LK   S      + +C ++  +G+ F     +RY  W
Sbjct: 555 MSKMD-ETPLKREVFVGMSSLRYLKVYNSLCPPHSETECKLNLPDGLEFPKDNAVRYLHW 613

Query: 52  HQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLA 110
            +FP   L +     NL+ LK+P S +  +W   +   +LK +DL +S  L  L  L  A
Sbjct: 614 VKFPGTELPSDFDPNNLIDLKLPYSNIITVWICTKVAPNLKWVDLSHSSNLNSLMGLLKA 673

Query: 111 QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            NL  L+L  C+SL E    ++ +  L  L+L  C SL SLP  I    LK L+L GCS 
Sbjct: 674 PNLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLLSLP-KITMDSLKTLILSGCSK 732

Query: 171 LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           L+    + S HL S L L G  I  LP +I  L  +  L +  CK L  +   +++L+ L
Sbjct: 733 LQTF-DVISEHLES-LYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELKSL 790

Query: 231 ESIRIHRCPNLQFL-----EMPSCNI---DGTRSKEQPSS--------ELKLKKCPRPES 274
           + +++ RC  L+       ++ S  +   DGT   E P +         L L +     +
Sbjct: 791 QELKLSRCSELKMFPDVKKKVESLRVLLLDGTSIAEMPGNIFDFSLLRRLCLSRNDNIRT 850

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLA--LL 332
           L         L  LE+  C N   LP    NLQ LN            P+ L      + 
Sbjct: 851 LRFDMGQMFHLKWLELKWCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIH 910

Query: 333 SKLELKNCSELEYISSS 349
           S     NC ELE +S +
Sbjct: 911 STFIFTNCHELEQVSKN 927


>gi|219566965|dbj|BAH04996.1| type III effector protein [Ralstonia solanacearum]
          Length = 984

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 212/483 (43%), Gaps = 74/483 (15%)

Query: 166 RGCSNLKNLPKMT--SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           R   +LK++ +M+  S  L+S LP     + ELP     ++++  L    C  L  + ++
Sbjct: 150 RAVDHLKSVLRMSGDSVQLKS-LP-----VPELPDVTFEIAHLKNLETVDCD-LHALPAT 202

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  LE++ +    NL+ L  P         +E   SE  LK  P     P G     
Sbjct: 203 LENLFLLETLSLKGAKNLKAL--PDAVWRLPALQELKLSETGLKSLP-----PVGGG--S 253

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I D P  E+LP    +L  L  L +  T + +L  G+GQL  L  L L++  +L
Sbjct: 254 ALQRLTIEDSP-LEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 312

Query: 344 EYISSSIFKLKSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS---- 397
           E +  S+ +++ +  I   I    +  G   +    +D S + ++P+    L   +    
Sbjct: 313 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAKLPADFGALGNLAHVSL 372

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              KL  LP+S+    +L +L + D  KL  LP   G L  L+EL + G  I E+P    
Sbjct: 373 SNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELP---- 428

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                   +   SS ++L               +D      LP + G L  L  L++  T
Sbjct: 429 -------SMGGASSLQTL--------------TVDDTALAGLPADFGALRNLAHLSLSNT 467

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            +RE+P + G L +L+ L L  N  L  +P SL  LS L  L L N+++  +P  + P S
Sbjct: 468 QLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPP-MGPGS 526

Query: 574 SLKYLDLFENNLDRIPE-----------------YLRSFPTSIPSEFTSLRLSVDLRNCL 616
           +LK L +  + L  IP                   LR+ P+SI  + ++L+  + L+N  
Sbjct: 527 ALKTLTVENSPLTSIPADIGIQCERLTQLSLSNTQLRALPSSI-GKLSNLK-GLTLKNNA 584

Query: 617 KLD 619
           +L+
Sbjct: 585 RLE 587



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 224/542 (41%), Gaps = 109/542 (20%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +L+     + P  T  I H +NL ++      +  L   ++NL  L+ + LK +K L  L
Sbjct: 167 QLKSLPVPELPDVTFEIAHLKNLETVDC---DLHALPATLENLFLLETLSLKGAKNLKAL 223

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
           PD                       ++  L  L+ L L     L SLP       L+RL 
Sbjct: 224 PD-----------------------AVWRLPALQELKLSET-GLKSLPPVGGGSALQRLT 259

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
           +                           +E+LP+    L  +  L + + K LE +SS I
Sbjct: 260 IEDSP-----------------------LEQLPAGFADLDQLASLSLSNTK-LEKLSSGI 295

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKS 284
            +L  L+S+ +   P L+ L      ++          EL L    R  +LPS   M  S
Sbjct: 296 GQLPALKSLSLQDNPKLERLPKSLGQVE----------ELTLIGG-RIHALPSASGM-SS 343

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L  L  +D  +  +LP + G L  L  + +  T +R+LP  +G L  L  L L++  +L 
Sbjct: 344 LQKL-TVDNSSLAKLPADFGALGNLAHVSLSNTKLRDLPASIGNLFTLKTLSLQDNPKLG 402

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
            + +S  +L  ++ +                  ++G+ I  +PS    +   S L++L  
Sbjct: 403 SLPASFGQLSGLQEL-----------------TLNGNRIHELPS----MGGASSLQTL-- 439

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
                        +D   L  LP + G L  L  L +  T +RE+P +   L AL  L L
Sbjct: 440 ------------TVDDTALAGLPADFGALRNLAHLSLSNTQLRELPANTGNLHALKTLSL 487

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
           +      +LPS L     L+ LE +  KN     LP  +G    LK LT++ + +  +P 
Sbjct: 488 QGNQQLATLPSSLGY---LSGLEELTLKNSSVSELP-PMGPGSALKTLTVENSPLTSIPA 543

Query: 522 SLG-QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN-NLERIPER-LDPLSSLKYL 578
            +G Q   L  L LS+  L+ +P S+ +LS+L  L L NN  LE + E  +  L S++ +
Sbjct: 544 DIGIQCERLTQLSLSNTQLRALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKI 603

Query: 579 DL 580
           DL
Sbjct: 604 DL 605



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 46/312 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
            + SL+++ +  S L  KLP D     NL  + L   + L +  +SI  L  L+ L L  
Sbjct: 340 GMSSLQKLTVDNSSL-AKLPADFGALGNLAHVSL-SNTKLRDLPASIGNLFTLKTLSLQD 397

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
              L SLP S      L+ L L G + +  LP M       TL +    +  LP+    L
Sbjct: 398 NPKLGSLPASFGQLSGLQELTLNG-NRIHELPSMGGASSLQTLTVDDTALAGLPADFGAL 456

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--NIDGTRSKEQPS 261
            N+  L + S  +L  + ++   L  L+++ +    N Q   +PS    + G        
Sbjct: 457 RNLAHLSL-SNTQLRELPANTGNLHALKTLSLQG--NQQLATLPSSLGYLSGLE------ 507

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG-NLQALNRLIIDGTAIR 320
            EL LK     E  P G     +L +L + + P    +P ++G   + L +L +  T +R
Sbjct: 508 -ELTLKNSSVSELPPMGPG--SALKTLTVENSP-LTSIPADIGIQCERLTQLSLSNTQLR 563

Query: 321 ELPEGLGQLALLSKLELKNCSELEYIS-------------------------SSIFKLKS 355
            LP  +G+L+ L  L LKN + LE +S                         SSI KL  
Sbjct: 564 ALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGLPSSIGKLPK 623

Query: 356 VESIEISNCSNL 367
           + ++++S C+ L
Sbjct: 624 LRTLDLSGCTGL 635


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 201/434 (46%), Gaps = 53/434 (12%)

Query: 286 TSLEIIDCPNF--ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           ++L   DC  +  E LP +  +   L  L +  +++  L  G  +   L +L+L +C+ L
Sbjct: 583 SNLRWFDCCKYPWESLPAKF-DPDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANL 641

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN--KCSKLES 401
              +     + ++E + +  CSNLK       C+            ++KLN   C  LES
Sbjct: 642 -MRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCS----------KKLIKLNLRDCKNLES 690

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL--ALS 459
             S +C ++SL  L +  C  LE+ P   G L+   E++V+ +GIR++P ++ Q   +L+
Sbjct: 691 F-SYVC-WESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLT 748

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
           +L L    +  +L   +   KSL  L++  C     LP+EIG+LE L++L    T I + 
Sbjct: 749 ELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQP 808

Query: 520 PESLGQLSSLEWLVLS--------DNNLQIIPESLNQ-LSSLVSLKLSNNNL--ERIPER 568
           P S+ +L+ L++L  +        ++ +  +   +NQ L SL +L LS  NL  E +P+ 
Sbjct: 809 PSSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFPPVNQGLCSLKTLNLSYCNLKDEGLPQD 868

Query: 569 LDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
           +  LSSL+ L+L  NN + +P+ L    +    +    +    L       P +L  I  
Sbjct: 869 IGSLSSLEVLNLRGNNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEF----PRQLDTIYA 924

Query: 629 DGWMKQSVNGETYITKSMY-------------FPGNE---IPKWFRHQSTGSTISLKTPQ 672
           D W   S+    +   S +                NE   IP+WF HQ    ++S+K P+
Sbjct: 925 D-WNNDSICNSLFQNISSFQHDICASDSLSLRVFTNEWKNIPRWFHHQGKDKSVSVKLPE 983

Query: 673 PTGY-NKLMGFAFC 685
                +  +GFA C
Sbjct: 984 NWYVCDNFLGFAVC 997



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 23/344 (6%)

Query: 44  TELRYFEWHQFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           + LR+F+  ++P ++L      + LV L +  S +  LW   +    L+R+DL     L 
Sbjct: 583 SNLRWFDCCKYPWESLPAKFDPDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANLM 642

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
           + PD +   NLE L L  CS+L E H S++   KL  L+L  CK+L S  + +  + L+ 
Sbjct: 643 RTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESF-SYVCWESLEC 701

Query: 163 LVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEELPSS-IKCLSNIGELLIYSCKRLENI 220
           L L+GCSNL+  P++         + +   GI +LPS+ I+  S++ EL +   K L  +
Sbjct: 702 LHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATL 761

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG--------TRSKEQPSSELKLKKCPRP 272
           S SI +L+ L  +++  C  L+ L     +++         T   + PSS ++L    R 
Sbjct: 762 SCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLN---RL 818

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE--LPEGLGQLA 330
           + L   +   KS   LE  D  +F   P   G L +L  L +    +++  LP+ +G L+
Sbjct: 819 KFLTFAKQ--KSEVGLE--DEVHFVFPPVNQG-LCSLKTLNLSYCNLKDEGLPQDIGSLS 873

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP 374
            L  L L+  +  E++  S+ +L S++S+++ +C +L   PE P
Sbjct: 874 SLEVLNLRG-NNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFP 916


>gi|15240889|ref|NP_198651.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758812|dbj|BAB09346.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006918|gb|AED94301.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 833

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 153/300 (51%), Gaps = 25/300 (8%)

Query: 7   EIQINPYTFSKMTELRLLKFCG-----SKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-N 60
           ++ I+   F  M+ L+ L+F       S    +   L  +P  +LR  EW +FP+  L +
Sbjct: 392 QLNISERAFDGMSNLKFLRFHDPYDDESDKLYLPQGLNNLP-QKLRLIEWSRFPMTCLPS 450

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               + LV ++M  SK+  LW   Q L +LKR+DL  SK L +LPDLS A NLE L +  
Sbjct: 451 NFCTKYLVEIRMKNSKLQNLWQGNQPLGNLKRMDLSESKHLKELPDLSTATNLEYLIMSG 510

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           C SL E  SSI  L KL +L L  C  L +LPT+I+ + L  L L  C  +K  P++ S 
Sbjct: 511 CISLVELPSSIGKLRKLLMLSLRGCSKLEALPTNINLESLDYLDLTDCLLIKKFPEI-ST 569

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGEL-LIYSCKRLENISSSIFKLQFLESIRIHRCP 239
           +++  L L    I+E+PS+IK  S++ +L + YS    EN+      L  + ++ I+   
Sbjct: 570 NIKD-LKLTKTAIKEVPSTIKSWSHLRKLEMSYS----ENLKELPHALDIITTLYIN--- 621

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           + +  E+P         K      L L+ C R  ++P    +  SL+ L + +C + ERL
Sbjct: 622 DTEMQEIPQW-----VKKISHLQTLGLEGCKRLVTIPQ---LSDSLSQLVVTNCESLERL 673



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 185/398 (46%), Gaps = 47/398 (11%)

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSL 453
           K SKL++L        +L  +++ + K L+ LPD L     LE L + G   + E+P S+
Sbjct: 463 KNSKLQNLWQGNQPLGNLKRMDLSESKHLKELPD-LSTATNLEYLIMSGCISLVELPSSI 521

Query: 454 AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
            +L  L  L L+ CS  E+LP+ + + +SL  L++ DC    + P+   N++ LK   + 
Sbjct: 522 GKLRKLLMLSLRGCSKLEALPTNINL-ESLDYLDLTDCLLIKKFPEISTNIKDLK---LT 577

Query: 513 GTAIREVPESLGQLSSLEWLVLS-DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
            TAI+EVP ++   S L  L +S   NL+ +P +L+ +++L    +++  ++ IP+ +  
Sbjct: 578 KTAIKEVPSTIKSWSHLRKLEMSYSENLKELPHALDIITTLY---INDTEMQEIPQWVKK 634

Query: 572 LSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSL-RLSVDLRN----------CLKLD 619
           +S L+ L L     L  IP+   S    + +   SL RL+   +N          C KL+
Sbjct: 635 ISHLQTLGLEGCKRLVTIPQLSDSLSQLVVTNCESLERLNFSFQNHPERFLWFLNCFKLN 694

Query: 620 PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLK-TPQPTGYNK 678
            NE  E I           +T  T ++  P  E+P  F +++ GS+I +    +P     
Sbjct: 695 -NEAREFI-----------QTSSTHAI-LPSREVPANFTYRANGSSIMVNLNHRPLSTT- 740

Query: 679 LMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESD 738
            + F  CV++   V +    +    DR+  +   + +    G D     Y   +  +  D
Sbjct: 741 -LRFKACVLL---VKKIDNDKEEAADRRTTVIPRIRENDKIGVD-VPWRYRFHVPTILED 795

Query: 739 HVFLGSSIFAGENSCKRSDEFFFHI-DRSCCEVKKCGI 775
           H+ L   I A   S K    F F I D +   +K+CG+
Sbjct: 796 HL-LTFQIEADVTSNKLL--FSFDIKDNNQAVIKECGV 830



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 127/236 (53%), Gaps = 23/236 (9%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRE 321
           E+++K   + ++L  G     +L  +++ +  + + LPD L     L  LI+ G  ++ E
Sbjct: 459 EIRMKNS-KLQNLWQGNQPLGNLKRMDLSESKHLKELPD-LSTATNLEYLIMSGCISLVE 516

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  +G+L  L  L L+ CS+LE + ++I  L+S++ +++++C  +K FPEI   NI   
Sbjct: 517 LPSSIGKLRKLLMLSLRGCSKLEALPTNI-NLESLDYLDLTDCLLIKKFPEIS-TNIKD- 573

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
                    LKL K + ++ +PS++  +  L  LE+   + L+ LP     L+ +  L +
Sbjct: 574 ---------LKLTKTA-IKEVPSTIKSWSHLRKLEMSYSENLKELPHA---LDIITTLYI 620

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
             T ++E+P+ + +++ L  L L+ C    ++P    +S SL+ L + +C++  RL
Sbjct: 621 NDTEMQEIPQWVKKISHLQTLGLEGCKRLVTIPQ---LSDSLSQLVVTNCESLERL 673



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 43/290 (14%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L ++ +KN S+L+ +      L +++ +++S   +LK  P++       + +E      L
Sbjct: 457 LVEIRMKN-SKLQNLWQGNQPLGNLKRMDLSESKHLKELPDLS----TATNLE-----YL 506

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG----TGIR 447
            ++ C  L  LPSS+   + L  L +  C KLE LP  + NLE+L+ L +          
Sbjct: 507 IMSGCISLVELPSSIGKLRKLLMLSLRGCSKLEALPTNI-NLESLDYLDLTDCLLIKKFP 565

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           E+  ++  L L+K  +K+      +PS +     L  LE+   +N   LP     L+ + 
Sbjct: 566 EISTNIKDLKLTKTAIKE------VPSTIKSWSHLRKLEMSYSENLKELPHA---LDIIT 616

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLV-----SLKLSNNN 561
            L I  T ++E+P+ + ++S L+ L L     L  IP+  + LS LV     SL+  N +
Sbjct: 617 TLYINDTEMQEIPQWVKKISHLQTLGLEGCKRLVTIPQLSDSLSQLVVTNCESLERLNFS 676

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT-------SIPSEFT 604
            +  PER      L +L+ F+ N +   E++++  T        +P+ FT
Sbjct: 677 FQNHPERF-----LWFLNCFKLN-NEAREFIQTSSTHAILPSREVPANFT 720


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 53/339 (15%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L RL +   ++  LP+ +GQL        +N  EL+   +S+  L     
Sbjct: 63  LPKEIGQLQNLQRLDLSFNSLTILPKEIGQL--------RNLQELDLSFNSLTTLPK--- 111

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
            E+    NL+                      L L++ ++L +LP  +   K+L  L++ 
Sbjct: 112 -EVGQLENLQR---------------------LDLHQ-NRLATLPMEIGQLKNLQELDL- 147

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  KL  LP E+  L  L+EL +    +  +PK + QL  L  L L   +   +LP  + 
Sbjct: 148 NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIG 206

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+WL L  N
Sbjct: 207 ELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 265

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L I+P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN L           T
Sbjct: 266 QLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL-----------T 314

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           ++P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 315 TLPKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 349



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 161/336 (47%), Gaps = 46/336 (13%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L ++   +  LP+ + QL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCN 377
             L +L+L   ++L  +   I +L++++++            EI    NLK        N
Sbjct: 163 RNLQELDLHR-NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL------N 215

Query: 378 IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           +  + +  +P  + +L          +++ +LP  +   ++L  L++    +L  LP E+
Sbjct: 216 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTILPKEI 274

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           G L+ L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L ++D
Sbjct: 275 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRVLD 330

Query: 490 CKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
             N     LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ + 
Sbjct: 331 LDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIG 390

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           QL +L  L L  N L   P+ +  L +L+ L L+ N
Sbjct: 391 QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 187/418 (44%), Gaps = 79/418 (18%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           T L   +QN + ++ +DL+Y K LT LP ++   QNL+ LDL + +SLT     I  L  
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQK-LTILPKEIGQLQNLQRLDLSF-NSLTILPKEIGQLRN 95

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
           L+ LDL    SLT+LP  +               L+NL ++     R         +  L
Sbjct: 96  LQELDLS-FNSLTTLPKEV-------------GQLENLQRLDLHQNR---------LATL 132

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR-----CPNL--QFLEMPSC 249
           P  I  L N+ EL + S K L  +   I +L+ L+ + +HR      P    Q   + + 
Sbjct: 133 PMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 250 NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL--EIIDCPNFE---------- 297
           N+  T+    P      K+    ++L +   +   LT+L  EI +  N E          
Sbjct: 192 NLIVTQLTTLP------KEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRIT 245

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP E+G LQ L  L +    +  LP+ +GQL  L +L+L   ++L  +   I +L++++
Sbjct: 246 ALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQ-NQLTTLPKEIGQLQNLQ 304

Query: 358 SI------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SK 398
            +            EI    NL+        ++D + +  +P  VL+L          ++
Sbjct: 305 ELCLDENQLTTLPKEIEQLQNLR------VLDLDNNQLTTLPKEVLRLQSLQVLALGSNR 358

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           L +LP  +   ++L  L +I   +L  LP E+G L+ L+EL ++   +   PK + QL
Sbjct: 359 LSTLPKEIGQLQNLQVLALI-SNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 415



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 15/136 (11%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L LS N+L I+P+ + QL +L  L LS N+L  +
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLR--LSVD 611
           P+ +  L +L+ LDL +N L  +P  +                T++P E   LR    +D
Sbjct: 110 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELD 169

Query: 612 L-RNCLKLDPNELSEI 626
           L RN L   P E+ ++
Sbjct: 170 LHRNQLTTLPKEIGQL 185



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 37/317 (11%)

Query: 46  LRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           L+  + HQ  L TL   I   +NL  L +  +K+T L  +++ L +L+ +DL  ++L T 
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 178

Query: 104 LPDLSLAQNLEILDL--GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYL 160
             ++   QNL+ L+L     ++L +    +Q L  L +LD      LT+LP  I   + L
Sbjct: 179 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD----NQLTTLPKEIGELQNL 234

Query: 161 KRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
           + LVLR  + +  LPK +        L L    +  LP  I  L N+  L ++   +L  
Sbjct: 235 EILVLRE-NRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQ-NQLTT 292

Query: 220 ISSSIFKLQFLESI------------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK 267
           +   I +LQ L+ +             I +  NL+ L++     D  +    P   L+L+
Sbjct: 293 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDL-----DNNQLTTLPKEVLRLQ 347

Query: 268 KCP-------RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIR 320
                     R  +LP      ++L  L +I       LP E+G LQ L  L +D   + 
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLALISN-QLTTLPKEIGQLQNLQELCLDENQLT 406

Query: 321 ELPEGLGQLALLSKLEL 337
             P+ + QL  L +L L
Sbjct: 407 TFPKEIRQLKNLQELHL 423


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 39/396 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSL----EGV--PFTELRYFEWH 52
           MS++  ++ ++  TF KM  LR LKF  S+   +C   S     EG+  P  E+RY  W 
Sbjct: 556 MSELKKKLPLDRSTFIKMRNLRYLKFYSSRCDRECEADSKLNFPEGLEFPLDEIRYLYWL 615

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPL  L    + +NL    +P S++ +LW+  ++   LK +DL +S+ L  L  L  A+
Sbjct: 616 KFPLMKLPKDFNPKNLTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSGLLNAE 675

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           +L+ L+L  C+SL E    ++ +  L  L++  C SL  LP  ++   LK L+L  CS++
Sbjct: 676 SLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLP-RMNLISLKTLILTNCSSI 734

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +   ++ S +L  TL L G  I +LP+ +  L  +  L +  CK L  +   + KL+ L+
Sbjct: 735 QKF-QVISDNLE-TLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQ 792

Query: 232 SIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
            + +  C  L+   +P           +DGT  KE P  +L      R E LP  +    
Sbjct: 793 ELVLSGCSKLKTFSVPIETMKCLQILLLDGTALKEMP--KLLRFNSSRVEDLPELRRGIN 850

Query: 284 SLTSLEII------DCPNFERLPDELGNLQALN-RLIIDGTAIRELPEGLGQLALLSKLE 336
            L+SL  +         N +   ++L +L+ L+ +   + T+I  LP        L  L+
Sbjct: 851 GLSSLRRLCLSRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPLLPPN------LEILD 904

Query: 337 LKNCSELEYISSSIFKLKSVESIE----ISNCSNLK 368
              C +L+ ++S +  LK +E ++     +NC+NL+
Sbjct: 905 AHGCEKLKTVASPMALLKLMEQVQSKFIFTNCNNLE 940



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 216/484 (44%), Gaps = 69/484 (14%)

Query: 298  RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +LP +  N + L    +  + I EL EG      L  ++L +  +L  +S  +   +S++
Sbjct: 621  KLPKDF-NPKNLTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSRKLCNLSG-LLNAESLQ 678

Query: 358  SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTSLE 416
             + +  C++L+  P           ++R+ S + L +  C+ L  LP    +  SL +L 
Sbjct: 679  RLNLEGCTSLEELPR---------EMKRMKSLIFLNMRGCTSLRVLPRMNLI--SLKTLI 727

Query: 417  IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
            + +C  +++      NLE L    ++GT I ++P  + +L  L  L LK C    ++P  
Sbjct: 728  LTNCSSIQKFQVISDNLETLH---LDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEF 784

Query: 476  LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
            L   K+L  L +  C         I  ++ L++L + GTA++E+P+          L  +
Sbjct: 785  LGKLKALQELVLSGCSKLKTFSVPIETMKCLQILLLDGTALKEMPK---------LLRFN 835

Query: 536  DNNLQIIPE---SLNQLSSLVSLKLSNNNL-ERIPERLDPLSSLKYLDL-FENNLDRIP- 589
             + ++ +PE    +N LSSL  L LS NN+   +   ++ L  LK+LDL +  NL  IP 
Sbjct: 836  SSRVEDLPELRRGINGLSSLRRLCLSRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPL 895

Query: 590  -------------EYLRSF--PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQ 634
                         E L++   P ++      ++      NC  L+    + I      K 
Sbjct: 896  LPPNLEILDAHGCEKLKTVASPMALLKLMEQVQSKFIFTNCNNLEQVAKNSITSYAQRKS 955

Query: 635  SVNG-----ETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCV 686
             ++      E  ++++++   FPG+++P WF +Q+ GS + LK P     N+L   A C 
Sbjct: 956  QLDARRCYKEGGVSEALFIACFPGSDVPSWFNYQTFGSALRLKLPPHWCDNRLSTIALCA 1015

Query: 687  VVACSVSECCRHESVEDDRKCNLFDVVCDRRSE-GYDSYTSSYLG----KISHVESDHVF 741
            VV             +D+      +  C+ ++E G     S  LG    +   ++SDHVF
Sbjct: 1016 VVT--------FPDTQDEINRFSIECTCEFKNELGTCIRFSCTLGGSWIESRKIDSDHVF 1067

Query: 742  LGSS 745
            +G +
Sbjct: 1068 IGYT 1071


>gi|147845221|emb|CAN81612.1| hypothetical protein VITISV_003348 [Vitis vinifera]
          Length = 901

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 150/302 (49%), Gaps = 23/302 (7%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGV--------PFTELRYFEWHQFPLKTL 59
           I I   + + M  LRLLK         +     V        P  ELRY  WH +PL+ L
Sbjct: 456 IHITIESLAMMKNLRLLKILLDHESTSMRDDYKVKLSKDFEFPSYELRYLYWHGYPLEYL 515

Query: 60  -NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ-NLEILD 117
            +  + E+LV L M  S + QLW++   L  L  I L  S+ L ++PD+S++  NLE L 
Sbjct: 516 PSSFNAEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQHLIEIPDISISXPNLEKLI 575

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
              CSSL E H SI  LNKL +L+L  CK L   P  I+ K L+ L   GCS LK  P +
Sbjct: 576 XDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIINMKALQILNFSGCSGLKKFPNI 635

Query: 178 TSCHLRSTLPLL--GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
              ++ + L L    + IEELPSSI  L+ +  L +  CK L+++ +SI KL+ LE + +
Sbjct: 636 QG-NMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFL 694

Query: 236 HRCPNLQ-FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
             C  L+ F EM   N+D  +       EL L   P  E LPS     K L  L +  C 
Sbjct: 695 SGCSKLESFPEMME-NMDNLK-------ELLLDGTP-IEVLPSSIERLKVLILLNLRKCK 745

Query: 295 NF 296
           N 
Sbjct: 746 NL 747



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 113/221 (51%), Gaps = 32/221 (14%)

Query: 299 LPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           +PD   +   L +LI DG +++ E+   +G+L  L  L LKNC +L      I  +K+++
Sbjct: 561 IPDISISXPNLEKLIXDGCSSLLEVHPSIGKLNKLILLNLKNCKKL-VCFPCIINMKALQ 619

Query: 358 SIEISNCSNLKGFPEIPFCNIDGS------------GIERIPSSV--------LKLNKCS 397
            +  S CS LK FP     NI G+             IE +PSS+        L L  C 
Sbjct: 620 ILNFSGCSGLKKFP-----NIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCK 674

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL- 456
            L+SLP+S+C  KSL  L +  C KLE  P+ + N++ L+EL ++GT I  +P S+ +L 
Sbjct: 675 NLKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLK 734

Query: 457 ALSKLKLKKCSSF-ESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            L  L L+KC +  +SL   L +  S+     ID  NF  L
Sbjct: 735 VLILLNLRKCKNLCQSLIEILELPPSVRD---IDAHNFTAL 772



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 15/133 (11%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            K+L  L    C   ++ P+  GN++ L  L +   AI ELP  +G L  L  L+LK C 
Sbjct: 615 MKALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCK 674

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSV---- 390
            L+ + +SI KLKS+E + +S CS L+ FPE       +    +DG+ IE +PSS+    
Sbjct: 675 NLKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLK 734

Query: 391 ----LKLNKCSKL 399
               L L KC  L
Sbjct: 735 VLILLNLRKCKNL 747



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 396 CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
           C KL   P  + M K+L  L    C  L++ P+  GN+E L +L +    I E+P S+  
Sbjct: 603 CKKLVCFPCIINM-KALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGH 661

Query: 456 L-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           L  L  L LK C + +SLP+ +   KSL  L +  C      P+ + N++ LK L + GT
Sbjct: 662 LTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGT 721

Query: 515 AIREVPESLGQLSSL 529
            I  +P S+ +L  L
Sbjct: 722 PIEVLPSSIERLKVL 736



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 22/261 (8%)

Query: 370 FP--EIPFCNIDGSGIERIPSS-----VLKLNKC-SKLESLPSSLCMFKSLTSLEIIDCK 421
           FP  E+ +    G  +E +PSS     +++L+ C S L+ L  +  + + L ++ +   +
Sbjct: 497 FPSYELRYLYWHGYPLEYLPSSFNAEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQ 556

Query: 422 KLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKK-CSSFESLPSRLYVS 479
            L  +PD   +   LE+L  +G + + EV  S+ +L    L   K C      P  + + 
Sbjct: 557 HLIEIPDISISXPNLEKLIXDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIINM- 615

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NN 538
           K+L  L    C    + P+  GN+E L  L +   AI E+P S+G L+ L  L L    N
Sbjct: 616 KALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKN 675

Query: 539 LQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
           L+ +P S+ +L SL  L LS  + LE  PE ++ + +LK L      LD  P  +   P+
Sbjct: 676 LKSLPTSICKLKSLEYLFLSGCSKLESFPEMMENMDNLKEL-----LLDGTP--IEVLPS 728

Query: 598 SIPSEFTSLRLSVDLRNCLKL 618
           SI  E   + + ++LR C  L
Sbjct: 729 SI--ERLKVLILLNLRKCKNL 747


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 177/384 (46%), Gaps = 85/384 (22%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           ++R  +W+ +    L +  + E LV L M  SK+ +LW+  + L +LK +DL  S+ L +
Sbjct: 672 KIRSLKWYSYQNICLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKE 731

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LP+LS A NLE L L  CSSL E  SSI+ L  L+ L L RC SL  LP+  ++  L+ L
Sbjct: 732 LPNLSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEEL 791

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L  CS+L                      E+LP SI   +N+ +L + +C R+      
Sbjct: 792 YLENCSSL----------------------EKLPPSINA-NNLQQLSLINCSRV------ 822

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                 +E   I    NLQ L++ +C           SS ++L     P S+ +      
Sbjct: 823 ------VELPAIENATNLQKLDLGNC-----------SSLIEL-----PLSIGTAT---- 856

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I  C +  +LP  +G++  L                        + +L NCS L
Sbjct: 857 NLKELNISGCSSLVKLPSSIGDITNLK-----------------------EFDLSNCSNL 893

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
             +  +I  LK ++++ ++ CS LK FPEI    I     +R+     L++N C+ L SL
Sbjct: 894 VELPINI-NLKFLDTLNLAGCSQLKSFPEIS-TKIFTDCYQRMSRLRDLRINNCNNLVSL 951

Query: 403 PSSLCMFKSLTSLEIIDCKKLERL 426
           P    +  SL  L   +CK LERL
Sbjct: 952 PQ---LPDSLAYLYADNCKSLERL 972



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 194/432 (44%), Gaps = 81/432 (18%)

Query: 305  NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            N + L  L +  + +R+L EG  QL  L  ++L N  +L+ + + +    ++E +++ +C
Sbjct: 691  NPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELPN-LSTATNLEELKLRDC 749

Query: 365  SNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEII---DC 420
            S+L   P         S IE++ S   L L +CS L  LPS    F + T LE +   +C
Sbjct: 750  SSLVELP---------SSIEKLTSLQRLYLQRCSSLVELPS----FGNATKLEELYLENC 796

Query: 421  KKLERLPDELGNLEALEELR-VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVS 479
              LE+LP  + N   L++L  +  + + E+P       L KL L  CSS   LP  +  +
Sbjct: 797  SSLEKLPPSI-NANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTA 855

Query: 480  KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS--- 535
             +L  L I  C + ++LP  IG++  LK   +   + + E+P ++  L  L+ L L+   
Sbjct: 856  TNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININ-LKFLDTLNLAGCS 914

Query: 536  ------DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDL 580
                  + + +I  +   ++S L  L+++N NNL  +P+  D L+        SL+ LD 
Sbjct: 915  QLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKSLERLDC 974

Query: 581  FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
              NN    PE   +FP                  C KL+      I+            T
Sbjct: 975  CFNN----PEISLNFP-----------------KCFKLNQEARDLIMH----------TT 1003

Query: 641  YITKSMYFPGNEIPKWFRHQST-GSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHE 699
             I  ++  PG ++P  F H++T G ++ +K  + +     + F  C+++         +E
Sbjct: 1004 CINATL--PGTQVPACFNHRATSGDSLKIKLKE-SSLPTTLRFKACIMLVKV------NE 1054

Query: 700  SVEDDRKCNLFD 711
             +  D K  +FD
Sbjct: 1055 EMSSDLKSMIFD 1066



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L++ DC +   LP  +  L +L RL +   +++ ELP   G    L +L L+NCS 
Sbjct: 740 NLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSS 798

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE +  SI    +++ + + NCS +   P I     + + +++     L L  CS L  L
Sbjct: 799 LEKLPPSI-NANNLQQLSLINCSRVVELPAIE----NATNLQK-----LDLGNCSSLIEL 848

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKL 461
           P S+    +L  L I  C  L +LP  +G++  L+E  +   + + E+P ++    L  L
Sbjct: 849 PLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININLKFLDTL 908

Query: 462 KLKKCSSFESLP---SRLYVS-----KSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            L  CS  +S P   ++++         L  L I +C N + LP    +L YL
Sbjct: 909 NLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYL 961


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 176/362 (48%), Gaps = 36/362 (9%)

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN-- 295
           E P    D T++ + P        SE KL   P+           K L +L+++D  +  
Sbjct: 30  EEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKE---------IKQLQNLKLLDLGHNQ 80

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              LP E+G L+ L  LI+    +  LP+ +GQL  L  L L N ++L  + + I +LK+
Sbjct: 81  LTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNN-NQLTTLPTEIRQLKN 139

Query: 356 VESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------S 401
           ++ +++ N + L   P+       +   ++  S +  +P  + KL    +L+        
Sbjct: 140 LQMLDLGN-NQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTI 198

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
           LP  +   ++L    ++D  +L  LP E+G L+ L EL +    +  +PK + QL   + 
Sbjct: 199 LPKEIGQLQNLQRF-VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQR 257

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
            +   + F  LP  +   ++L  L  +        P EIG L+ L+ L +    +  +PE
Sbjct: 258 FVLDNNQFTILPKEIGQLQNLQEL-YLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPE 316

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            + QL +L+ L LS+N L+ IP+ + QL +L SL LSNN L  +P+ ++ L +L+ L+L+
Sbjct: 317 EIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLW 376

Query: 582 EN 583
            N
Sbjct: 377 NN 378



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 169/385 (43%), Gaps = 76/385 (19%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQY 133
            K+T L  +++ L +LK +DL +++ LT LP ++   +NL++L L Y + LT     I  
Sbjct: 56  QKLTTLPKEIKQLQNLKLLDLGHNQ-LTALPKEIGQLKNLQLLIL-YYNQLTALPKEIGQ 113

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGV 191
           L  L+VL L+  + LT+LPT I   K L+ L L G + L  LPK +        L L   
Sbjct: 114 LKNLKVLFLNNNQ-LTTLPTEIRQLKNLQMLDL-GNNQLTTLPKEIGKLENLQLLSLYES 171

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +  LP  I  L N+ EL + S  +L  +   I +LQ L+   +    N Q   +P    
Sbjct: 172 QLTILPQEIGKLQNLHELDL-SHNQLTILPKEIGQLQNLQRFVLD---NNQLTILP---- 223

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                          K+  + ++L         LT            LP E+G LQ L R
Sbjct: 224 ---------------KEIGKLQNLHELYLGHNQLTI-----------LPKEIGQLQNLQR 257

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
            ++D      LP+ +GQL  L +L L + ++L      I KL+ ++++ + N        
Sbjct: 258 FVLDNNQFTILPKEIGQLQNLQELYL-SYNQLTTFPKEIGKLQKLQTLNLWN-------- 308

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
                                    ++L +LP  +   K+L +L + +  +L+ +P E+G
Sbjct: 309 -------------------------NQLTTLPEEIEQLKNLKTLNLSE-NQLKTIPQEIG 342

Query: 432 NLEALEELRVEGTGIREVPKSLAQL 456
            L+ L+ L +    +  +PK + QL
Sbjct: 343 QLQNLKSLDLSNNQLTTLPKEIEQL 367



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 147/352 (41%), Gaps = 59/352 (16%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P    ++  L+LL    ++   +   +  +   +L    ++Q       I   +NL  L 
Sbjct: 62  PKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLF 121

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
           +  +++T L  +++ L +L+ +DL  ++L T   ++   +NL++L L Y S LT     I
Sbjct: 122 LNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSL-YESQLTILPQEI 180

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV 191
             L  L  LDL   + LT LP  I               L+NL +    + + T+     
Sbjct: 181 GKLQNLHELDLSHNQ-LTILPKEI-------------GQLQNLQRFVLDNNQLTI----- 221

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
               LP  I  L N+ EL +    +L  +   I +LQ L+   +    N QF  +P    
Sbjct: 222 ----LPKEIGKLQNLHELYL-GHNQLTILPKEIGQLQNLQRFVLD---NNQFTILP---- 269

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNR 311
                          K+  + ++L      +  LT+            P E+G LQ L  
Sbjct: 270 ---------------KEIGQLQNLQELYLSYNQLTT-----------FPKEIGKLQKLQT 303

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           L +    +  LPE + QL  L  L L   ++L+ I   I +L++++S+++SN
Sbjct: 304 LNLWNNQLTTLPEEIEQLKNLKTLNLSE-NQLKTIPQEIGQLQNLKSLDLSN 354


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 177/384 (46%), Gaps = 85/384 (22%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           ++R  +W+ +    L +  + E LV L M  SK+ +LW+  + L +LK +DL  S+ L +
Sbjct: 672 KIRSLKWYSYQNICLPSTFNPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKE 731

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LP+LS A NLE L L  CSSL E  SSI+ L  L+ L L RC SL  LP+  ++  L+ L
Sbjct: 732 LPNLSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEEL 791

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L  CS+L                      E+LP SI   +N+ +L + +C R+      
Sbjct: 792 YLENCSSL----------------------EKLPPSINA-NNLQQLSLINCSRV------ 822

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                 +E   I    NLQ L++ +C           SS ++L     P S+ +      
Sbjct: 823 ------VELPAIENATNLQKLDLGNC-----------SSLIEL-----PLSIGTA----T 856

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I  C +  +LP  +G++                         L + +L NCS L
Sbjct: 857 NLKELNISGCSSLVKLPSSIGDITN-----------------------LKEFDLSNCSNL 893

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESL 402
             +  +I  LK ++++ ++ CS LK FPEI    I     +R+     L++N C+ L SL
Sbjct: 894 VELPINI-NLKFLDTLNLAGCSQLKSFPEIS-TKIFTDCYQRMSRLRDLRINNCNNLVSL 951

Query: 403 PSSLCMFKSLTSLEIIDCKKLERL 426
           P    +  SL  L   +CK LERL
Sbjct: 952 PQ---LPDSLAYLYADNCKSLERL 972



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 194/432 (44%), Gaps = 81/432 (18%)

Query: 305  NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            N + L  L +  + +R+L EG  QL  L  ++L N  +L+ + + +    ++E +++ +C
Sbjct: 691  NPEFLVELHMSFSKLRKLWEGTKQLRNLKWMDLSNSEDLKELPN-LSTATNLEELKLRDC 749

Query: 365  SNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEII---DC 420
            S+L   P         S IE++ S   L L +CS L  LPS    F + T LE +   +C
Sbjct: 750  SSLVELP---------SSIEKLTSLQRLYLQRCSSLVELPS----FGNATKLEELYLENC 796

Query: 421  KKLERLPDELGNLEALEELR-VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVS 479
              LE+LP  + N   L++L  +  + + E+P       L KL L  CSS   LP  +  +
Sbjct: 797  SSLEKLPPSI-NANNLQQLSLINCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTA 855

Query: 480  KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEWLVLS--- 535
             +L  L I  C + ++LP  IG++  LK   +   + + E+P ++  L  L+ L L+   
Sbjct: 856  TNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININ-LKFLDTLNLAGCS 914

Query: 536  ------DNNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLS--------SLKYLDL 580
                  + + +I  +   ++S L  L+++N NNL  +P+  D L+        SL+ LD 
Sbjct: 915  QLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYLYADNCKSLERLDC 974

Query: 581  FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
              NN    PE   +FP                  C KL+      I+            T
Sbjct: 975  CFNN----PEISLNFP-----------------KCFKLNQEARDLIMH----------TT 1003

Query: 641  YITKSMYFPGNEIPKWFRHQST-GSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHE 699
             I  ++  PG ++P  F H++T G ++ +K  + +     + F  C+++         +E
Sbjct: 1004 CINATL--PGTQVPACFNHRATSGDSLKIKLKE-SSLPTTLRFKACIMLVKV------NE 1054

Query: 700  SVEDDRKCNLFD 711
             +  D K  +FD
Sbjct: 1055 EMSSDLKSMIFD 1066



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L++ DC +   LP  +  L +L RL +   +++ ELP   G    L +L L+NCS 
Sbjct: 740 NLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP-SFGNATKLEELYLENCSS 798

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE +  SI    +++ + + NCS +   P I     + + +++     L L  CS L  L
Sbjct: 799 LEKLPPSI-NANNLQQLSLINCSRVVELPAIE----NATNLQK-----LDLGNCSSLIEL 848

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKL 461
           P S+    +L  L I  C  L +LP  +G++  L+E  +   + + E+P ++    L  L
Sbjct: 849 PLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININLKFLDTL 908

Query: 462 KLKKCSSFESLP---SRLYVS-----KSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            L  CS  +S P   ++++         L  L I +C N + LP    +L YL
Sbjct: 909 NLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDSLAYL 961


>gi|357468511|ref|XP_003604540.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505595|gb|AES86737.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1100

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 30/218 (13%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNK-CMVHSLEGV-PF-TELRYFEWHQFPLKTL-NIL 62
           +++++P  F+KMT L+ L F G  N  C+    +G+ PF T+LRY  W  +PL++L    
Sbjct: 623 KLKLSPDVFAKMTNLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPLESLPKKF 682

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             E LV L +  S V +LW  VQ+L++LK + L +S+ L +LPD S A NL++L++  C 
Sbjct: 683 SAEKLVILDLSYSLVEKLWCGVQDLINLKEVTLSFSEDLKELPDFSKAINLKVLNIQRCY 742

Query: 123 SLTETHSSIQYLNKLE---VLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            LT  H SI  L+KLE    LDL RC  + +LP+S            GC +     K+  
Sbjct: 743 MLTSVHPSIFSLDKLENIVELDLSRC-PINALPSSF-----------GCQS-----KL-- 783

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
                TL L G  IE +PSSIK L+ + +L I  C  L
Sbjct: 784 ----ETLVLRGTQIESIPSSIKDLTRLRKLDISDCSEL 817



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 162/392 (41%), Gaps = 82/392 (20%)

Query: 382 GIERIPSSVLKLNKCSK-LESLPSSLCMFKSLTSLEIIDCKK--LERLPDELGNLEALEE 438
           G++  P+ +  L+     LESLP       S   L I+D     +E+L   + +L  L+E
Sbjct: 657 GLQPFPTDLRYLHWVHYPLESLPKKF----SAEKLVILDLSYSLVEKLWCGVQDLINLKE 712

Query: 439 LRVE-GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           + +     ++E+P     + L  L +++C    S+   ++   SL  LE I   +  R P
Sbjct: 713 VTLSFSEDLKELPDFSKAINLKVLNIQRCYMLTSVHPSIF---SLDKLENIVELDLSRCP 769

Query: 498 DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
                             I  +P S G  S LE LVL    ++ IP S+  L+ L  L +
Sbjct: 770 ------------------INALPSSFGCQSKLETLVLRGTQIESIPSSIKDLTRLRKLDI 811

Query: 558 SN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL 616
           S+ + L  +PE    L +L         +D +      FP+++  +    +  ++  NC 
Sbjct: 812 SDCSELLALPELPSSLETLL--------VDCVSLKSVFFPSTVAEQLKENKKRIEFWNCF 863

Query: 617 KLDPNELSEI---IKDGWMKQSVNG---------ETYIT--------KSMY-FPGNEIPK 655
           KLD   L  I   ++   M+ +            E+Y+         +++Y +PG+ +P+
Sbjct: 864 KLDERSLINIGLNLQINLMEFAYQHLSTLEHDKVESYVDYKDILDSYQAVYVYPGSSVPE 923

Query: 656 WFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNL------ 709
           W  +++T + + +    P   + L+GF FC ++A            ED + C++      
Sbjct: 924 WLEYKTTKNDMIVDL-SPPHLSPLLGFVFCFILA------------EDSKYCDIMEFNIS 970

Query: 710 -FDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
            FD   D   +G D Y         + E DHV
Sbjct: 971 TFDGEGDGEKDGVDIYMYR---TCCYTELDHV 999


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+GNLQ L  L +    +  +P+ +G L  L KL+L   +++  + + I KL+S++ 
Sbjct: 52  LPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDL-GFNKITVLPNEIGKLQSLQE 110

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKS 411
           +                 N+  + +  IP  + +L          ++L +LP  +   ++
Sbjct: 111 L-----------------NLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQN 153

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFE 470
           L  L + +  +L  +P E+GNL+ L+EL +    +  +PK + QL  L KL L K +   
Sbjct: 154 LQELHLWE-NQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDK-NQLT 211

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +LP  +   ++L  L +   + F  LP EIGNL+ L+ L +    +  +P+ +G L  L+
Sbjct: 212 TLPQEIGKLQNLRGLALTGNQ-FTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQ 270

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP- 589
            L L  N L  +P+ +  L +L  L L +N L  IP+ +  L +L+YL+L  N L  +P 
Sbjct: 271 ELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPK 330

Query: 590 --EYLRSFP---------TSIPSEFTSLR 607
             E L+S           TS P E   L+
Sbjct: 331 EIENLQSLESLDLSGNPLTSFPEEIGKLQ 359



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 145/302 (48%), Gaps = 30/302 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+GNLQ L +L +    I  LP  +G+L  L +L L + ++L  I   I++L+ +++
Sbjct: 75  IPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQELNL-SFNQLTTIPKEIWELQHLQT 133

Query: 359 I------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKL 399
           +            EI    NL+        ++  + +  IP  +  L          + L
Sbjct: 134 LHLVYNQLTTLPKEIGKLQNLQEL------HLWENQLTTIPQEIGNLQNLKELYLMHNNL 187

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-L 458
            +LP  +   ++L  L I+D  +L  LP E+G L+ L  L + G     +PK +  L  L
Sbjct: 188 TTLPKEVGQLQNLQKL-ILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNL 246

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
             L L + +   +LP  +   + L  L + D      LP EIGNL+ LK L ++   +  
Sbjct: 247 QGLALTR-NQLTTLPKEIGNLQKLQELRL-DHNQLTTLPKEIGNLQNLKDLNLRSNQLTT 304

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +P+ +G L +LE+L LS N L  +P+ +  L SL SL LS N L   PE +  L  LK L
Sbjct: 305 IPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRL 364

Query: 579 DL 580
            L
Sbjct: 365 RL 366



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 40/247 (16%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL------------K 464
           ++ KKL  LP E+GNL+ L+EL +    +  +P+ +  L  L KL L             
Sbjct: 44  LNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIG 103

Query: 465 KCSSFESL----------PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           K  S + L          P  ++  + L +L ++       LP EIG L+ L+ L +   
Sbjct: 104 KLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLV-YNQLTTLPKEIGKLQNLQELHLWEN 162

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
            +  +P+ +G L +L+ L L  NNL  +P+ + QL +L  L L  N L  +P+ +  L +
Sbjct: 163 QLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQN 222

Query: 575 LKYLDLFENNLDRIPEYL------------RSFPTSIPSEFTSLRLSVDLRNCLKLDPNE 622
           L+ L L  N    +P+ +            R+  T++P E  +L+   +LR    LD N+
Sbjct: 223 LRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELR----LDHNQ 278

Query: 623 LSEIIKD 629
           L+ + K+
Sbjct: 279 LTTLPKE 285



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 163/394 (41%), Gaps = 66/394 (16%)

Query: 71  KMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSS 130
           K+     ++L + +QN   ++ + L   KL+    ++   QNL+ L+L + + LT     
Sbjct: 20  KLDAEDYSKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNL-WENQLTTIPQE 78

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPL 188
           I  L  L+ LDL   K +T LP  I   + L+ L L   + L  +PK +       TL L
Sbjct: 79  IGNLQHLQKLDLGFNK-ITVLPNEIGKLQSLQELNL-SFNQLTTIPKEIWELQHLQTLHL 136

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
           +   +  LP  I  L N+ EL ++   +L  I   I  LQ           NL+ L +  
Sbjct: 137 VYNQLTTLPKEIGKLQNLQELHLWE-NQLTTIPQEIGNLQ-----------NLKELYLMH 184

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
            N+                      +LP      ++L  L I+D      LP E+G LQ 
Sbjct: 185 NNLT---------------------TLPKEVGQLQNLQKL-ILDKNQLTTLPQEIGKLQN 222

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI--------- 359
           L  L + G     LP+ +G L  L  L L   ++L  +   I  L+ ++ +         
Sbjct: 223 LRGLALTGNQFTTLPKEIGNLQNLQGLALTR-NQLTTLPKEIGNLQKLQELRLDHNQLTT 281

Query: 360 ---EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNK-------CSKLESLPSSLCMF 409
              EI N  NLK        N+  + +  IP  +  L          ++L +LP  +   
Sbjct: 282 LPKEIGNLQNLKDL------NLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENL 335

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
           +SL SL+ +    L   P+E+G L+ L+ LR+E 
Sbjct: 336 QSLESLD-LSGNPLTSFPEEIGKLQHLKRLRLEN 368



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 144/337 (42%), Gaps = 62/337 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSS 123
           +NL  L +  +++T +  ++ NL  L+++DL ++K+ T LP+ +   Q+L+ L+L + + 
Sbjct: 60  QNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKI-TVLPNEIGKLQSLQELNLSF-NQ 117

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVL---------RGCSNLKN 173
           LT     I  L  L+ L L     LT+LP  I   + L+ L L         +   NL+N
Sbjct: 118 LTTIPKEIWELQHLQTLHL-VYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQN 176

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           L ++   H   T          LP  +  L N+ +L I    +L  +   I KLQ L  +
Sbjct: 177 LKELYLMHNNLT---------TLPKEVGQLQNLQKL-ILDKNQLTTLPQEIGKLQNLRGL 226

Query: 234 ------------RIHRCPNLQFLEMPSCNIDGTRSKE----QPSSELKL---------KK 268
                        I    NLQ L + + N   T  KE    Q   EL+L         K+
Sbjct: 227 ALTGNQFTTLPKEIGNLQNLQGLAL-TRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKE 285

Query: 269 CPRPESLPSGQCMFKSLTSL--EIIDCPNFE----------RLPDELGNLQALNRLIIDG 316
               ++L         LT++  EI +  N E           LP E+ NLQ+L  L + G
Sbjct: 286 IGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSG 345

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
             +   PE +G+L  L +L L+N   L      I KL
Sbjct: 346 NPLTSFPEEIGKLQHLKRLRLENIPTLLPQKEKIRKL 382


>gi|356506541|ref|XP_003522038.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 131/249 (52%), Gaps = 14/249 (5%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMV---HSLEGVPFTELRYFEWHQFPLKTL-NIL 62
           E++++P TF+KM++L+ L F      C+    H L+     ELRYF W  FPLK+L    
Sbjct: 597 ELKLSPDTFTKMSKLQFLYF--PHQGCVDNFPHRLQSFS-VELRYFVWRYFPLKSLPENF 653

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
             +NLV L +  S+V +LWD VQNL +LK + +  SK L +LP+LS A NLE+LD+  C 
Sbjct: 654 SAKNLVLLDLSYSRVEKLWDGVQNLKNLKEVKVSGSKNLKELPNLSEATNLEVLDISACP 713

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
            L     SI  LNKL+++ L+  +S T +    H+  +    L+G +  K L  +TS  L
Sbjct: 714 QLASVIPSIFSLNKLKIMKLN-YQSFTQMIIDNHTSSISFFTLQGSTKQKKLISVTSEEL 772

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
            S      V  +E PSS  C S + E+   +   +  + SS   L+    +R+     L 
Sbjct: 773 ISC-----VCYKEKPSSFVCQSKL-EMFRITESDMGRLPSSFMNLRRQRYLRVLDPRELL 826

Query: 243 FLEMPSCNI 251
            +E  S ++
Sbjct: 827 MIESGSVDV 835


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 171/399 (42%), Gaps = 65/399 (16%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWEN 66
           EIQ+    F K+ ++RLLKF   +N     SLE +   ELRY +W+ +P + L      N
Sbjct: 366 EIQLEAQAFRKLKKIRLLKF---RNVYFSQSLEYLS-NELRYLKWYGYPFRNLPCTFQSN 421

Query: 67  -LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            L+ L M  S+V Q+W+  +    LK + L +SK L K PD     +LE L L  C  L 
Sbjct: 422 ELLELNMSYSQVEQIWEGTKQFNKLKIMKLSHSKNLVKTPDFRGVPSLEKLVLEGCLELQ 481

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           E   SI  L +L +L+L  CK L+ LP SI+  K LK + L GCS               
Sbjct: 482 EIDQSIGILERLALLNLKDCKKLSILPESIYGLKALKIVNLSGCS--------------- 526

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
              +L   +EEL   IK L  +            ++S +  K  F          NL+ L
Sbjct: 527 ---ILDYMLEEL-GDIKSLEEL------------DVSGTTVKQPF---SSFSHFKNLKIL 567

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNF----ERLP 300
            +  C+       EQP +       P    LP        L SL ++D  N     E +P
Sbjct: 568 SLRGCS-------EQPPAIWN----PHLSLLPGKGSNAMDLYSLMVLDLGNCNLQEETIP 616

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            +L  L +L    + G     LP  + +L+ L  L L NC  L+ + +      SV+ + 
Sbjct: 617 TDLSCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVP---SSVKLLS 673

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
              CS L+  PE     +D SG++   S       C KL
Sbjct: 674 AQACSALETLPE----TLDLSGLQ---SPRFNFTNCFKL 705



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 175/395 (44%), Gaps = 72/395 (18%)

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK-LKSVESIEISNCSNLKGFPEIPF 375
           + + ++ EG  Q   L  ++L +   L  + +  F+ + S+E + +  C  L+       
Sbjct: 431 SQVEQIWEGTKQFNKLKIMKLSHSKNL--VKTPDFRGVPSLEKLVLEGCLELQ------- 481

Query: 376 CNIDGS-GI-ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
             ID S GI ER+  ++L L  C KL  LP S+   K+L  + +  C  L+ + +ELG++
Sbjct: 482 -EIDQSIGILERL--ALLNLKDCKKLSILPESIYGLKALKIVNLSGCSILDYMLEELGDI 538

Query: 434 EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSS---------FESLPSRLYVSKSLT 483
           ++LEEL V GT +++   S +    L  L L+ CS             LP +   +  L 
Sbjct: 539 KSLEELDVSGTTVKQPFSSFSHFKNLKILSLRGCSEQPPAIWNPHLSLLPGKGSNAMDLY 598

Query: 484 SLEIIDCKNF----MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD--- 536
           SL ++D  N       +P ++  L  LK   + G     +P S+ +LS LE L L +   
Sbjct: 599 SLMVLDLGNCNLQEETIPTDLSCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLDNCRN 658

Query: 537 -NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
             ++Q +P S+  LS+        + LE +PE LD LS L+            P +    
Sbjct: 659 LQSMQAVPSSVKLLSAQAC-----SALETLPETLD-LSGLQS-----------PRF---- 697

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS--MYFPGNEI 653
                          +  NC KL  N+    I    ++  + G +       +  PG+EI
Sbjct: 698 ---------------NFTNCFKLVENQGCNNIGFMMLRNYLQGLSNPKPGFDIIIPGSEI 742

Query: 654 PKWFRHQSTGS-TISLKTPQPTGYNKLMGFAFCVV 687
           P W  HQS G  +IS++ P     +K MGFA C V
Sbjct: 743 PDWLSHQSLGDCSISIELPPVWCDSKWMGFALCAV 777


>gi|21655189|gb|AAM28909.1| NBS/LRR [Pinus taeda]
          Length = 967

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 18/303 (5%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ---LALLSKLELKNCS 341
           L  L + +C   +R+P E+G ++ L +++     +       G+   L  L  L+L NC 
Sbjct: 349 LRELNLTECNQLQRVPKEIGQIRVLQKVVFRRCRLLSSNHSSGRVSDLHFLEHLDLTNCR 408

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
            L  + ++   LK +  +++S CS LK  P+        S  + +  + L   KC  L  
Sbjct: 409 SLRSLPNNFGGLKHLRHLDLSFCSKLKMLPD--------SFSQLLLINYLTFEKCKILNI 460

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
            P+ L    SL  L+   C KL+ LP  + +   L+ L +   G++++P+ L +L   + 
Sbjct: 461 GPNILGKSTSLEHLDFRGCDKLQVLPCNITSQRHLKRLNIHCRGLKQLPEDLGELTGLRY 520

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREV 519
            + +C     +P  L    +L  LE ID ++     +P+ +G LE LK+L IK   +  +
Sbjct: 521 LILECPQITQIPDSL---GNLIHLESIDFRSSRLRHIPESVGRLELLKLLRIKCHRLSHL 577

Query: 520 PESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN-NLERIPERLDPLSSLKY 577
           P ++GQL++L+ L L+    LQ +P S   L+ LV+L + +  NL+  P  LD L SL+ 
Sbjct: 578 PNAIGQLNNLQSLFLAGCKALQNLPPSFENLTKLVTLDIYDAPNLQITPGILDGLRSLEV 637

Query: 578 LDL 580
           L L
Sbjct: 638 LSL 640



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 209/505 (41%), Gaps = 102/505 (20%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELR----YFEWHQFPLKTL-NILHWENLV 68
           + S+M +L+LL   G+          G  F+ L     +  W  FP +++ + L    L 
Sbjct: 273 SLSQMKDLKLLLLQGTSF--------GGDFSHLSKNLVWLRWWDFPYQSIPSNLPVGKLE 324

Query: 69  SLKMPGSKVTQLWDD---VQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSL 124
            L +   +V  LWD+    Q  + L+ ++L     L ++P ++   + L+ +    C  L
Sbjct: 325 VLDLGRGRVVTLWDEDDCSQLPLKLRELNLTECNQLQRVPKEIGQIRVLQKVVFRRCRLL 384

Query: 125 TETHSS--IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH 181
           +  HSS  +  L+ LE LDL  C+SL SLP +    K+L+ L L  CS LK         
Sbjct: 385 SSNHSSGRVSDLHFLEHLDLTNCRSLRSLPNNFGGLKHLRHLDLSFCSKLK--------- 435

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIF-KLQFLESIRIHRCPN 240
                         LP S   L  I  L    CK L NI  +I  K   LE +    C  
Sbjct: 436 -------------MLPDSFSQLLLINYLTFEKCKIL-NIGPNILGKSTSLEHLDFRGCDK 481

Query: 241 LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLP 300
           LQ L    CNI   R  ++ +       C   + LP        L  L I++CP   ++P
Sbjct: 482 LQVL---PCNITSQRHLKRLNIH-----CRGLKQLPEDLGELTGLRYL-ILECPQITQIP 532

Query: 301 DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
           D LGNL  L  +    + +R +PE +G+L LL  L +K C  L ++ ++I +L +++S  
Sbjct: 533 DSLGNLIHLESIDFRSSRLRHIPESVGRLELLKLLRIK-CHRLSHLPNAIGQLNNLQS-- 589

Query: 361 ISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
                                         L L  C  L++LP S      L +L+I D 
Sbjct: 590 ------------------------------LFLAGCKALQNLPPSFENLTKLVTLDIYDA 619

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL----------ALSKLKLKKCSSFE 470
             L+  P  L  L +LE L + G       KSLA+           AL +L+L K     
Sbjct: 620 PNLQITPGILDGLRSLEVLSLNGC------KSLAEGCIISLCQKAEALERLRLCKMEVEN 673

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMR 495
            L        SL +LE+  CKN +R
Sbjct: 674 CLRILEQTCSSLKTLEVYACKNLVR 698



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 159/347 (45%), Gaps = 41/347 (11%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSEL 343
           L  L++ +C +   LP+  G L+ L  L +   + ++ LP+   QL L++ L  + C  L
Sbjct: 399 LEHLDLTNCRSLRSLPNNFGGLKHLRHLDLSFCSKLKMLPDSFSQLLLINYLTFEKCKIL 458

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESL 402
               + + K  S+E ++   C  L+  P    CNI           + +LN  C  L+ L
Sbjct: 459 NIGPNILGKSTSLEHLDFRGCDKLQVLP----CNITSQ------RHLKRLNIHCRGLKQL 508

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           P  L     L  L I++C ++ ++PD LGNL  LE +    + +R +P+S+ +L L KL 
Sbjct: 509 PEDLGELTGLRYL-ILECPQITQIPDSLGNLIHLESIDFRSSRLRHIPESVGRLELLKLL 567

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAIREVPE 521
             KC     LP+ +    +L SL +  CK    LP    NL  L  L I     ++  P 
Sbjct: 568 RIKCHRLSHLPNAIGQLNNLQSLFLAGCKALQNLPPSFENLTKLVTLDIYDAPNLQITPG 627

Query: 522 SLGQLSSLEWLVLSDNNLQIIPE----SLNQ----LSSLVSLKLSNNNLERIPERLDPLS 573
            L  L SLE  VLS N  + + E    SL Q    L  L   K+   N  RI E+    S
Sbjct: 628 ILDGLRSLE--VLSLNGCKSLAEGCIISLCQKAEALERLRLCKMEVENCLRILEQ--TCS 683

Query: 574 SLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLS-VDLRNCLKL 618
           SLK L+++   NL R             +E  S  L+ V L+NCL+L
Sbjct: 684 SLKTLEVYACKNLVR-------------AEICSTTLTEVSLKNCLQL 717



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 173/434 (39%), Gaps = 71/434 (16%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDL 142
           V +L  L+ +DL   + L  LP+     ++L  LDL +CS L     S   L  +  L  
Sbjct: 393 VSDLHFLEHLDLTNCRSLRSLPNNFGGLKHLRHLDLSFCSKLKMLPDSFSQLLLINYLTF 452

Query: 143 DRCKSLTSLPTSI-HSKYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVGIEELPSSI 200
           ++CK L   P  +  S  L+ L  RGC  L+ LP  +TS      L +   G+++LP  +
Sbjct: 453 EKCKILNIGPNILGKSTSLEHLDFRGCDKLQVLPCNITSQRHLKRLNIHCRGLKQLPEDL 512

Query: 201 KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQP 260
             L+ +   LI  C ++  I  S+  L  LESI                +   +R +  P
Sbjct: 513 GELTGL-RYLILECPQITQIPDSLGNLIHLESI----------------DFRSSRLRHIP 555

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAI 319
            S  +L+                 L  L  I C     LP+ +G L  L  L + G  A+
Sbjct: 556 ESVGRLE-----------------LLKLLRIKCHRLSHLPNAIGQLNNLQSLFLAGCKAL 598

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
           + LP     L  L  L++ +   L+     +  L+S+E + ++ C +L     I  C   
Sbjct: 599 QNLPPSFENLTKLVTLDIYDAPNLQITPGILDGLRSLEVLSLNGCKSLAEGCIISLCQ-K 657

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              +ER+    +++  C ++     S     SL +LE+  CK L R              
Sbjct: 658 AEALERLRLCKMEVENCLRILEQTCS-----SLKTLEVYACKNLVR-------------- 698

Query: 440 RVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
                        +    L+++ LK C    ++ S       LT L + +C+    +   
Sbjct: 699 -----------AEICSTTLTEVSLKNCLQLRTI-SGFSADMRLTKLCLRNCQELFEVT-S 745

Query: 500 IGNLEYLKVLTIKG 513
           +G+L +L+ L I G
Sbjct: 746 LGDLHFLETLDISG 759



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 37/310 (11%)

Query: 88  VSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK 146
            SL+ +D +    L  LP +++  ++L+ L++ +C  L +    +  L  L  L L+ C 
Sbjct: 469 TSLEHLDFRGCDKLQVLPCNITSQRHLKRLNI-HCRGLKQLPEDLGELTGLRYLILE-CP 526

Query: 147 SLTSLPTSIHS-KYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLS 204
            +T +P S+ +  +L+ +  R  S L+++P+ +    L   L +    +  LP++I  L+
Sbjct: 527 QITQIPDSLGNLIHLESIDFRS-SRLRHIPESVGRLELLKLLRIKCHRLSHLPNAIGQLN 585

Query: 205 NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS-------- 256
           N+  L +  CK L+N+  S   L  L ++ I+  PNLQ    P   +DG RS        
Sbjct: 586 NLQSLFLAGCKALQNLPPSFENLTKLVTLDIYDAPNLQI--TPGI-LDGLRSLEVLSLNG 642

Query: 257 --------------KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
                         K +    L+L K      L   +    SL +LE+  C N  R   E
Sbjct: 643 CKSLAEGCIISLCQKAEALERLRLCKMEVENCLRILEQTCSSLKTLEVYACKNLVRA--E 700

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           + +       + +   +R +  G      L+KL L+NC EL +  +S+  L  +E+++IS
Sbjct: 701 ICSTTLTEVSLKNCLQLRTI-SGFSADMRLTKLCLRNCQEL-FEVTSLGDLHFLETLDIS 758

Query: 363 NCSNLKGFPE 372
            C  LK F E
Sbjct: 759 GC--LKLFSE 766



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 31/240 (12%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILHWE 65
           + I P    K T L  L F G  +K  V          L+    H   LK L  ++    
Sbjct: 458 LNIGPNILGKSTSLEHLDFRGC-DKLQVLPCNITSQRHLKRLNIHCRGLKQLPEDLGELT 516

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL----------------------LTK 103
            L  L +   ++TQ+ D + NL+ L+ ID + S+L                      L+ 
Sbjct: 517 GLRYLILECPQITQIPDSLGNLIHLESIDFRSSRLRHIPESVGRLELLKLLRIKCHRLSH 576

Query: 104 LPD-LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLK 161
           LP+ +    NL+ L L  C +L     S + L KL  LD+    +L   P  +   + L+
Sbjct: 577 LPNAIGQLNNLQSLFLAGCKALQNLPPSFENLTKLVTLDIYDAPNLQITPGILDGLRSLE 636

Query: 162 RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL----SNIGELLIYSCKRL 217
            L L GC +L     ++ C     L  L +   E+ + ++ L    S++  L +Y+CK L
Sbjct: 637 VLSLNGCKSLAEGCIISLCQKAEALERLRLCKMEVENCLRILEQTCSSLKTLEVYACKNL 696


>gi|6018730|emb|CAB57879.1| PopC protein [Ralstonia solanacearum]
          Length = 1024

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 185/426 (43%), Gaps = 54/426 (12%)

Query: 181 HLRSTLPLLGVGIE-------ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           HL+S L + G  ++       ELP     ++++  L    C  L  + +++  L  LE++
Sbjct: 194 HLKSDLRMSGDSVQLKSLPVPELPDVTFEIAHLKNLETVDCD-LHALPATLENLFLLETL 252

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            +    N  F  +P         +E   SE  LK  P     P G     +L  L I D 
Sbjct: 253 SLKGAKN--FKALPDAVWRLPALQELKLSETGLKSLP-----PVGGG--SALQRLTIEDS 303

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           P  E+LP    +L  L  L +  T + +L  G+GQL  L  L L++  +LE +  S+ ++
Sbjct: 304 P-LEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSLGQV 362

Query: 354 KSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-------KLESLPS 404
           + +  I   I    +  G   +    +D S + ++P+    L   +       KL  LP+
Sbjct: 363 EELTLIGGRIHALPSASGMSSLQKLTVDNSSLAKLPADFGALGNLAHVSLSNTKLRDLPA 422

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
           S+    +L +L + D  KL  LP   G L  L+EL + G  I E+P            + 
Sbjct: 423 SIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELP-----------SMG 471

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
             SS ++L               +D      LP + G L  L  L++  T +RE+P + G
Sbjct: 472 GASSLQTL--------------TVDDTALAGLPADFGALRNLAHLSLSNTQLRELPANTG 517

Query: 525 QLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            L +L+ L L  N  L  +P SL  LS L  L L N+++  +P  + P S+LK L +  +
Sbjct: 518 NLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPP-MGPGSALKTLTVENS 576

Query: 584 NLDRIP 589
            L  IP
Sbjct: 577 PLTSIP 582



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 11/164 (6%)

Query: 438 ELRVEGTGIR-------EVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           +LR+ G  ++       E+P    ++A L  L+   C    +LP+ L     L +L +  
Sbjct: 198 DLRMSGDSVQLKSLPVPELPDVTFEIAHLKNLETVDCD-LHALPATLENLFLLETLSLKG 256

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
            KNF  LPD +  L  L+ L +  T ++ +P  +G  S+L+ L + D+ L+ +P     L
Sbjct: 257 AKNFKALPDAVWRLPALQELKLSETGLKSLP-PVGGGSALQRLTIEDSPLEQLPAGFADL 315

Query: 550 SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN-NLDRIPEYL 592
             L SL LSN  LE++   +  L +LK L L +N  L+R+P+ L
Sbjct: 316 DQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLERLPKSL 359



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 46/312 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
            + SL+++ +  S L  KLP D     NL  + L   + L +  +SI  L  L+ L L  
Sbjct: 380 GMSSLQKLTVDNSSL-AKLPADFGALGNLAHVSL-SNTKLRDLPASIGNLFTLKTLSLQD 437

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
              L SLP S      L+ L L G + +  LP M       TL +    +  LP+    L
Sbjct: 438 NPKLGSLPASFGQLSGLQELTLNG-NRIHELPSMGGASSLQTLTVDDTALAGLPADFGAL 496

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--NIDGTRSKEQPS 261
            N+  L + S  +L  + ++   L  L+++ +    N Q   +PS    + G        
Sbjct: 497 RNLAHLSL-SNTQLRELPANTGNLHALKTLSLQG--NQQLATLPSSLGYLSGL------- 546

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG-NLQALNRLIIDGTAIR 320
            EL LK     E  P G     +L +L + + P    +P ++G   + L +L +  T +R
Sbjct: 547 EELTLKNSSVSELPPMGPG--SALKTLTVENSP-LTSIPADIGIQCERLTQLSLSNTQLR 603

Query: 321 ELPEGLGQLALLSKLELKNCSELEYIS-------------------------SSIFKLKS 355
            LP  +G+L+ L  L LKN + LE +S                         SSI KL  
Sbjct: 604 ALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGLPSSIGKLPK 663

Query: 356 VESIEISNCSNL 367
           + ++++S C+ L
Sbjct: 664 LRTLDLSGCTGL 675


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 226/495 (45%), Gaps = 64/495 (12%)

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           N++ LDL  C  L      +  L +LE LDL     L +LP  +             +N+
Sbjct: 1   NIKHLDLSDCQ-LHTLPPEVGKLTQLEWLDLSS-NPLQTLPAEV----------GQLTNV 48

Query: 172 KNLPKMTSCHLRSTLPLLGV------------GIEELPSSIKCLSNIGELLIYSCKRLEN 219
           K+L  ++ C LR+  P +G              ++ LP+ +  L+N+  L +  C+ L  
Sbjct: 49  KHL-NLSHCQLRTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQ-LHT 106

Query: 220 ISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
           +   ++KL  LE + +   P LQ L      +   +        L L +C +  +LPS  
Sbjct: 107 LPLEVWKLTQLEWLDLSSNP-LQTLPAEVGQLTNVK-------HLDLSQC-QLRTLPSE- 156

Query: 280 CMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
                LT LE +D  +   + LP E+G+L  L +L +    ++ LP  +G    +  L+L
Sbjct: 157 --VGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDL 214

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSV 390
            +C +L  +   ++KL  +E +++ + + L+  P        + + N+    +  +P  V
Sbjct: 215 SHC-QLRTLPFEVWKLTQLEWLDLRS-NPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEV 272

Query: 391 LKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
            +L +  KL       ++LP+ +    ++  L++  C+ L  LP E+  L  LE L +  
Sbjct: 273 GRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQ-LRTLPFEVWKLTQLEWLSLSS 331

Query: 444 TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEI 500
             ++ +P  + QL  + +L L  C    +LP  +     LT LE +D  +     LP E+
Sbjct: 332 NPLQTLPAEVGQLTNVKQLNLSDCQ-LHTLPPEV---GKLTQLERLDLSSNPLQTLPAEV 387

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           G L  +K L +    +  +P  +G+L+ LEWL L  N L  +P  + QL+++  L LS+ 
Sbjct: 388 GQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNVKHLDLSHC 447

Query: 561 NLERIPERLDPLSSL 575
            L  +P  +  L+ L
Sbjct: 448 QLHTLPPEVGRLTQL 462



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 41/417 (9%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           ++ LP+ +  L+N+  L +  C+ L  +   + +L  LE + +   P LQ L      + 
Sbjct: 35  LQTLPAEVGQLTNVKHLNLSHCQ-LRTLPPEVGRLTQLEWLDLSSNP-LQTLPAEVGQLT 92

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALN 310
             +        L L  C +  +LP        LT LE +D  +   + LP E+G L  + 
Sbjct: 93  NVK-------HLDLSHC-QLHTLP---LEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVK 141

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN-LKG 369
            L +    +R LP  +G+L  L  L+L + + L+ + + +  L ++E +++  CSN L+ 
Sbjct: 142 HLDLSQCQLRTLPSEVGRLTQLEWLDLSS-NPLQTLPAEVGHLTNLEKLDL--CSNPLQT 198

Query: 370 FP-EIPFC------NIDGSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKSLTSL 415
            P E+  C      ++    +  +P  V KL        + + L++LP+ +    ++  L
Sbjct: 199 LPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYL 258

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            + DC+ L  LP E+G L  LE+L +    ++ +P  +     +  L L  C    +LP 
Sbjct: 259 NLSDCQ-LHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQ-LRTLPF 316

Query: 475 RLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
            ++    LT LE +   +     LP E+G L  +K L +    +  +P  +G+L+ LE L
Sbjct: 317 EVW---KLTQLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERL 373

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            LS N LQ +P  + QL+++  L LS   L  +P  +  L+ L++LDL  N L  +P
Sbjct: 374 DLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALP 430



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 190/400 (47%), Gaps = 56/400 (14%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ++LP+      ++  L +  C     LP E+G L  L  L +    ++ LP  +GQL  +
Sbjct: 36  QTLPAEVGQLTNVKHLNLSHC-QLRTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNV 94

Query: 333 SKLELKNC------------SELEYIS----------SSIFKLKSVESIEISNCSNLKGF 370
             L+L +C            ++LE++           + + +L +V+ +++S C  L+  
Sbjct: 95  KHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQ-LRTL 153

Query: 371 P-------EIPFCNIDGSGIERIPSSV------LKLNKCSK-LESLPSSLCMFKSLTSLE 416
           P       ++ + ++  + ++ +P+ V       KL+ CS  L++LP+ +    ++  L+
Sbjct: 154 PSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLD 213

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK-LKLKKCSSFESLPSR 475
           +  C+ L  LP E+  L  LE L +    ++ +P  +  L   K L L  C     LP  
Sbjct: 214 LSHCQ-LRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQ-LHILPPE 271

Query: 476 LYVSKSLTSLEIID-CKNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           +     LT LE +D C N ++ LP E+G+   +K L +    +R +P  + +L+ LEWL 
Sbjct: 272 V---GRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLS 328

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
           LS N LQ +P  + QL+++  L LS+  L  +P  +  L+ L+ LDL  N L  +P  + 
Sbjct: 329 LSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEV- 387

Query: 594 SFPTSIPSEFTSLRLSVDLRNC-LKLDPNELSEIIKDGWM 632
                   + T+++  +DL  C L   P E+  + +  W+
Sbjct: 388 -------GQLTNVK-HLDLSQCLLHTLPPEVGRLTQLEWL 419



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 229/510 (44%), Gaps = 70/510 (13%)

Query: 33  CMVHSL--EGVPFTELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLV 88
           C +H+L  E    T+L + +    PL+TL   +    N+  L +   ++  L  +V  L 
Sbjct: 10  CQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLT 69

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSL 148
            L+ +DL  + L T   ++    N++ LDL +C  L      +  L +LE LDL     L
Sbjct: 70  QLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHC-QLHTLPLEVWKLTQLEWLDLSS-NPL 127

Query: 149 TSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGE 208
            +LP  +             +N+K+L  ++ C LR+           LPS +  L+ + E
Sbjct: 128 QTLPAEV----------GQLTNVKHL-DLSQCQLRT-----------LPSEVGRLTQL-E 164

Query: 209 LLIYSCKRLENISSSIFKLQFLESIRIHRCPN-LQFL--EMPSCNIDGTRSKEQPSSELK 265
            L  S   L+ + + +  L  LE + +  C N LQ L  E+  C    T  K    S  +
Sbjct: 165 WLDLSSNPLQTLPAEVGHLTNLEKLDL--CSNPLQTLPAEVGHC----TNVKHLDLSHCQ 218

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELP 323
           L+  P              LT LE +D  +   + LP E+G+L  +  L +    +  LP
Sbjct: 219 LRTLP---------FEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILP 269

Query: 324 EGLGQLALLSKLELKNCSE-LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
             +G+L  L KL+L  CS  L+ + + +    +V+ +++S+C        +PF     + 
Sbjct: 270 PEVGRLTQLEKLDL--CSNPLQTLPAEVGHCTNVKHLDLSHCQ----LRTLPFEVWKLTQ 323

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           +E +  S       + L++LP+ +    ++  L + DC +L  LP E+G L  LE L + 
Sbjct: 324 LEWLSLS------SNPLQTLPAEVGQLTNVKQLNLSDC-QLHTLPPEVGKLTQLERLDLS 376

Query: 443 GTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDE 499
              ++ +P  + QL  +  L L +C    +LP  +     LT LE +D ++     LP E
Sbjct: 377 SNPLQTLPAEVGQLTNVKHLDLSQC-LLHTLPPEV---GRLTQLEWLDLRSNPLHALPAE 432

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
           +G L  +K L +    +  +P  +G+L+ L
Sbjct: 433 VGQLTNVKHLDLSHCQLHTLPPEVGRLTQL 462



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 16/183 (8%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTA 515
           +  L L  C    +LP  +     LT LE +D  +     LP E+G L  +K L +    
Sbjct: 2   IKHLDLSDCQ-LHTLPPEV---GKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQ 57

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +R +P  +G+L+ LEWL LS N LQ +P  + QL+++  L LS+  L  +P  +  L+ L
Sbjct: 58  LRTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQL 117

Query: 576 KYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC-LKLDPNELSEIIKDGWMKQ 634
           ++LDL  N L  +P  +         + T+++  +DL  C L+  P+E+  + +  W+  
Sbjct: 118 EWLDLSSNPLQTLPAEV--------GQLTNVK-HLDLSQCQLRTLPSEVGRLTQLEWLDL 168

Query: 635 SVN 637
           S N
Sbjct: 169 SSN 171



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 174/394 (44%), Gaps = 46/394 (11%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCMVHSL--EGVPFTELRYFEWHQFPLKTL------ 59
           +Q  P    ++T ++ L      + C +H+L  E    T+L + +    PL+TL      
Sbjct: 81  LQTLPAEVGQLTNVKHLDL----SHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQ 136

Query: 60  --NILHWE----NLVSLKMPGSKVTQL-WDD------------VQNLVSLKRIDLKYSKL 100
             N+ H +     L +L     ++TQL W D            V +L +L+++DL  + L
Sbjct: 137 LTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPL 196

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKY 159
            T   ++    N++ LDL +C  L      +  L +LE LDL R   L +LPT + H   
Sbjct: 197 QTLPAEVGHCTNVKHLDLSHC-QLRTLPFEVWKLTQLEWLDL-RSNPLQTLPTEVGHLTN 254

Query: 160 LKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
           +K L L  C      P++        L L    ++ LP+ +   +N+  L +  C+ L  
Sbjct: 255 VKYLNLSDCQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQ-LRT 313

Query: 220 ISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
           +   ++KL  LE + +   P LQ L      +   +       +L L  C +  +LP   
Sbjct: 314 LPFEVWKLTQLEWLSLSSNP-LQTLPAEVGQLTNVK-------QLNLSDC-QLHTLPPEV 364

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                L  L++   P  + LP E+G L  +  L +    +  LP  +G+L  L  L+L++
Sbjct: 365 GKLTQLERLDLSSNP-LQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRS 423

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
            + L  + + + +L +V+ +++S+C      PE+
Sbjct: 424 -NPLHALPAEVGQLTNVKHLDLSHCQLHTLPPEV 456


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 191/423 (45%), Gaps = 54/423 (12%)

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L G  + E+P  I  L+N+ +L ++   RL  +   I +L  L  + + +    Q  
Sbjct: 70  ALSLSGNQLTEVPKEIGKLANLTQLRLHQ-NRLTEVPEEIGQLASLTELSLFQN---QLT 125

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           E+P          E   S+ +L K P+  E L S   ++ S   L           P EL
Sbjct: 126 EVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLT--------EAPKEL 177

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           G L  L  L +    + E+P+  GQL  L KL L   + L  +   + +LKS+  + +S 
Sbjct: 178 GKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQ-NRLTGVPQELGELKSLTELHLSQ 236

Query: 364 CS------NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-------KLESLPSSLCMFK 410
                    L     + + +ID + +  IP  + +L K +       +L+ +P  L    
Sbjct: 237 NKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLA 296

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
            LT   +   + +E +P E+G +  L  LR++   + EVP+ L+QL  L++L L +    
Sbjct: 297 RLTRFSLSQNQLIE-IPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQ---- 351

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
                                    ++P E+G +  L  L++    + EVP+ LGQL +L
Sbjct: 352 ---------------------NQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINL 390

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             L L+ N L  +P+ L +L++L  L LS N L  +P+ L  L+SL+ LDL +N L ++P
Sbjct: 391 VELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVP 450

Query: 590 EYL 592
           + L
Sbjct: 451 KEL 453



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 161/345 (46%), Gaps = 28/345 (8%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+G L  L  L + G  + E+P+ +G+L  L  L L + ++L  +   I KL ++  
Sbjct: 35  VPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSL-SGNQLTEVPKEIGKLANLTQ 93

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCS-------KLESLPS 404
           + +   + L   PE       +   ++  + +  +P  + +L   +       +L  +P 
Sbjct: 94  LRLHQ-NRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPK 152

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
            L    SLT L  +   +L   P ELG L  L EL +    + EVPK   QL +L KL L
Sbjct: 153 DLERLISLTKL-YLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNL 211

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            + +    +P  L   KSLT L +   K  M +P E+G L  L  L I    + E+PE +
Sbjct: 212 SQ-NRLTGVPQELGELKSLTELHLSQNK-LMEVPKELGKLTNLTWLHIDQNQLTEIPEEI 269

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL+ L  L LS N L+ +P+ L QL+ L    LS N L  IP+ +  ++ L +L + +N
Sbjct: 270 GQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQN 329

Query: 584 NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIK 628
            L  +P  L           T L L    +N L   P EL ++ K
Sbjct: 330 QLTEVPRELSQL-----VNLTRLHLH---QNQLTKIPKELGKVTK 366



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 152/347 (43%), Gaps = 69/347 (19%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+G L  L  L + G  + E+P+ +G+LA L++L L   + L  +   I +L S+  
Sbjct: 58  VPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQ-NRLTEVPEEIGQLASLTE 116

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-------KLESLPSSLCMFKS 411
           + +             F N     +  +P  + +L   +       +L  +P  L    S
Sbjct: 117 LSL-------------FQN----QLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLIS 159

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFE 470
           LT L  +   +L   P ELG L  L EL +    + EVPK   QL +L KL L +     
Sbjct: 160 LTKL-YLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQ----- 213

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
                                    +P E+G L+ L  L +    + EVP+ LG+L++L 
Sbjct: 214 --------------------NRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLT 253

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           WL +  N L  IPE + QL+ L  L LS+N L+ +P+ L  L+ L    L +N L  IP+
Sbjct: 254 WLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPK 313

Query: 591 YLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVN 637
            +      I                L++D N+L+E+ ++  + Q VN
Sbjct: 314 EIGKIAKLI---------------WLRIDQNQLTEVPRE--LSQLVN 343



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 18/241 (7%)

Query: 422 KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSK 480
           KL  +P E+G L  L  L + G  + EVPK + +L  L  L L   +    +P  +    
Sbjct: 31  KLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSL-SGNQLTEVPKEIGKLA 89

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
           +LT L +   +    +P+EIG L  L  L++    + EVP+ +GQL +L  L LS N L 
Sbjct: 90  NLTQLRLHQNR-LTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLM 148

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP---- 596
            IP+ L +L SL  L LS N L   P+ L  L +L  L L +N L  +P+          
Sbjct: 149 KIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIK 208

Query: 597 --------TSIPSEFTSLRLSVDL---RNCLKLDPNELSEIIKDGWMKQSVNGETYITKS 645
                   T +P E   L+   +L   +N L   P EL ++    W+    N  T I + 
Sbjct: 209 LNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEE 268

Query: 646 M 646
           +
Sbjct: 269 I 269



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCK-NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           ++F+    R+  +K + +  +  C      +P EIG L  L  L++ G  + EVP+ +G+
Sbjct: 5   AAFQVAKQRIAEAKRIAAPTLDLCSLKLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGK 64

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
           L++L  L LS N L  +P+ + +L++L  L+L  N L  +PE +  L+SL  L LF+N L
Sbjct: 65  LTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQL 124

Query: 586 DRIPE 590
             +P+
Sbjct: 125 TEVPK 129


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 21/323 (6%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWE-NLVSLKM 72
            F  M++L+ L F    +    H    +P T L+   W   PL+TL ++     LV +K+
Sbjct: 567 AFPNMSQLKFLNF----DFVRAHIHINIPST-LKVLHWELCPLETLPLVDQRYELVEIKI 621

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
             S + QLW   + L  LK +DL  S L  + PDLS    LE LDL  C  LT  H S+ 
Sbjct: 622 SWSNIVQLWHGFKFLEKLKHLDLSCSGL-EQTPDLSGVPVLETLDLSCCHCLTLIHPSLI 680

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGV 191
               L VL+L  C SL + P  +    LK L L  C +  + P+   C  + S L    +
Sbjct: 681 CHKSLLVLNLWECTSLETFPGKLEMSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDM 740

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            I ELP S+ CL  + EL +  CK+L  +  SI +L+ L  +R   C +L       C++
Sbjct: 741 AISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSL-------CDL 793

Query: 252 DGTRSKEQPSSELKLKK-CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
             + S     S L L+  C   ES P     F SLT L+ +   +F  LP  +  L  L 
Sbjct: 794 PHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLD-LSGNHFVNLPISIHELPKLK 852

Query: 311 RLIIDG----TAIRELPEGLGQL 329
            L ++G     ++ ELP  + +L
Sbjct: 853 CLSLNGCKRLQSLPELPSSIREL 875



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 49/325 (15%)

Query: 409 FKSLTSLEIID--CKKLERLPDELGNLEALEELRVEGTGIREV--PKSLAQLALSKLKLK 464
           FK L  L+ +D  C  LE+ PD L  +  LE L +       +  P  +   +L  L L 
Sbjct: 633 FKFLEKLKHLDLSCSGLEQTPD-LSGVPVLETLDLSCCHCLTLIHPSLICHKSLLVLNLW 691

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
           +C+S E+ P +L +S SL  L + DCK+FM  P+    +  L  L+ +  AI E+P SLG
Sbjct: 692 ECTSLETFPGKLEMS-SLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAISELPISLG 750

Query: 525 QLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFE 582
            L  L  L L     L  +P+S+++L SL  L+ S+ ++L  +P  +  +  L  LDL +
Sbjct: 751 CLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVSVIPFLSILDLRD 810

Query: 583 NNL--DRIPEYLRSFPTSIP-----SEFTSLRLSV---------DLRNCLKLD-----PN 621
             L  +  P     FP+        + F +L +S+          L  C +L      P+
Sbjct: 811 CCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLPELPS 870

Query: 622 ELSEIIKDGWMKQSVNGETY--ITKS----------------MYFPGNEIPKWFRHQSTG 663
            + E+    W   S++  ++  ++K+                M  PG  IP WF H+   
Sbjct: 871 SIREL--KAWCCDSLDTRSFNNLSKACSVFASTSQGPGEVLQMVIPGTNIPSWFVHRQES 928

Query: 664 STISLKTPQPTGYNKLMGFAFCVVV 688
           + + +  P     ++ +G A C +V
Sbjct: 929 NCLLVPFPHHCHPSERLGIALCFLV 953



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 91/215 (42%), Gaps = 41/215 (19%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L +C   E+ P G+    SL  L + DC +F   P+    +  L+RL     AI ELP
Sbjct: 688 LNLWECTSLETFP-GKLEMSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAISELP 746

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCNID 379
             LG L  LS+L+L+ C +L  +  SI +L+S+  +  S+CS+L   P     IPF    
Sbjct: 747 ISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVSVIPFL--- 803

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
                    S+L L  C                       C   E  P + G   +L +L
Sbjct: 804 ---------SILDLRDC-----------------------CLTEESFPCDFGQFPSLTDL 831

Query: 440 RVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLP 473
            + G     +P S+ +L  L  L L  C   +SLP
Sbjct: 832 DLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLP 866


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 26/321 (8%)

Query: 282 FKSLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            + L +L+++D        LP E+G LQ L  L +    +   P+ +G+L  L  L L +
Sbjct: 113 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-S 171

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++++ I   I KL+ ++S+ + N + L   P+       + + N+  + I+ +P  + K
Sbjct: 172 ANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEK 230

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   + L SL + D  +L  LP E+G L+ L+ L +    
Sbjct: 231 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQ 289

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGN 502
           +  +P+ +  L  L  L L   +   ++P  +     L +L+++D  N     LP EIG 
Sbjct: 290 LTTIPQEIGHLQNLQDLYLV-SNQLTTIPKEI---GQLQNLQMLDLGNNQLTILPKEIGK 345

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L+ L+ L +    +  +P+ +GQL +L+ L LS+N L  IP+ + QL +L  L LSNN L
Sbjct: 346 LQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 405

Query: 563 ERIPERLDPLSSLKYLDLFEN 583
             IP+ +  L +L+ L L  N
Sbjct: 406 ITIPKEIGQLQNLQTLYLRNN 426



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 180/390 (46%), Gaps = 59/390 (15%)

Query: 247 PSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER- 298
           P   +D T + + P        SE KLK  P+             L +L+++D  + +  
Sbjct: 34  PKTYMDLTEAFQNPLDVRVLILSEQKLKALPKK---------IGQLKNLQMLDLSDNQLI 84

Query: 299 -LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP E+  L+ L  L +    +  LP+ + QL  L  L+L+  ++L  +   I KL++++
Sbjct: 85  ILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLR-SNQLTILPKEIGKLQNLQ 143

Query: 358 SIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
            + +SN + L  FP+       + + N+  + I+ IP  + KL K   L  LP++     
Sbjct: 144 ELYLSN-NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL-YLPNN----- 196

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
                      +L  LP E+G L+ L+ L +    I+ +P+ + +L  L  L L K +  
Sbjct: 197 -----------QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHK-NQL 244

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            +LP  +   + L SL + D      LP EIG L+ LKVL +    +  +P+ +G L +L
Sbjct: 245 TTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNL 303

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L L  N L  IP+ + QL +L  L L NN L  +P+ +  L +L+ L L  N L  IP
Sbjct: 304 QDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIP 363

Query: 590 EYLRSFP------------TSIPSEFTSLR 607
           + +                T+IP E   L+
Sbjct: 364 KEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 393



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 22/228 (9%)

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRL 476
           I+  +KL+ LP ++G L+ L+ L +    +  +PK + QL   ++     +    LP  +
Sbjct: 54  ILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEI 113

Query: 477 YVSKSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
              + L +L+++D +      LP EIG L+ L+ L +    +   P+ +G+L  L+WL L
Sbjct: 114 ---RQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL 170

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
           S N ++ IP+ + +L  L SL L NN L  +P+ +  L  L++L+L  N +  +P+ +  
Sbjct: 171 SANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEK 230

Query: 595 FP------------TSIPSEFTSLR----LSVDLRNCLKLDPNELSEI 626
                         T++P E   L+    L +D  N L   P E+ ++
Sbjct: 231 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLD-NNQLTTLPQEIGQL 277



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 17/177 (9%)

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
           E ++ K +M L +   N   ++VL +    ++ +P+ +GQL +L+ L LSDN L I+P+ 
Sbjct: 30  EEVEPKTYMDLTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKE 89

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTS 605
           + QL +L  L L +N L  +P+ +  L +L+ LDL  N L  +P+ +             
Sbjct: 90  IRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKL-----QNLQE 144

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK---------SMYFPGNEI 653
           L LS    N L   P E+ ++ K  W+  S N    I K         S+Y P N++
Sbjct: 145 LYLS---NNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 198



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 175/394 (44%), Gaps = 49/394 (12%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L  +++ L +L+ +DL  ++L+    ++   +NL++LDL   + L
Sbjct: 71  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLR-SNQL 129

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTSCHLR 183
           T     I  L  L+ L L   + LT+ P  I      + +    + +K +PK +      
Sbjct: 130 TILPKEIGKLQNLQELYLSNNQ-LTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKL 188

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
            +L L    +  LP  I  L  + + L  S  +++ +   I KLQ L+ + +H+    Q 
Sbjct: 189 QSLYLPNNQLTTLPQEIGKLQKL-QWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN---QL 244

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
             +P                 +++K  + ESL               +D      LP E+
Sbjct: 245 TTLPQ----------------EIEKLQKLESLG--------------LDNNQLTTLPQEI 274

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           G LQ L  L ++   +  +P+ +G L  L  L L   ++L  I   I +L++++ +++ N
Sbjct: 275 GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLV-SNQLTTIPKEIGQLQNLQMLDLGN 333

Query: 364 CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
            + L   P+      +   ++ + +  L  N+ +   ++P  +   ++L  L  +   +L
Sbjct: 334 -NQLTILPK------EIGKLQNLQTLYLSNNQLT---TIPKEIGQLQNLQEL-YLSNNQL 382

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
             +P E+G L+ L+EL +    +  +PK + QL 
Sbjct: 383 TTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQ 416


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 126/248 (50%), Gaps = 9/248 (3%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS----KNKCMVHSLEGVPF--TELRYFEWHQF 54
           +S+I     ++   F  M  LR LK   +      +  ++  +G+      LR   W  +
Sbjct: 544 ISEIAELFTLDEDAFKGMRNLRFLKIYKNPLERNEETKLYLPQGIQSLSRRLRLLHWDAY 603

Query: 55  PLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNL 113
           P+  + +      LV L M  S++ ++W+  Q L  LK + L  SK L ++PDLS A NL
Sbjct: 604 PMSRMPSDFSPAYLVELGMIDSELEKMWEGPQPLKYLKNMSLWRSKKLKEVPDLSKAPNL 663

Query: 114 EILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKN 173
           E L L  C SL    SSI+YL  L+ L+++ C  L  LPT+I+ + L  L L GCS +++
Sbjct: 664 EELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKLEFLPTNINLESLSNLTLYGCSLIRS 723

Query: 174 LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            P ++  H  S L L    IEE+P  I+ ++ +  L +  C +L  IS +I KL+ LE +
Sbjct: 724 FPDIS--HNISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDV 781

Query: 234 RIHRCPNL 241
               C  L
Sbjct: 782 DFSLCYAL 789



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 62/417 (14%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            + L +  KL+ +P  L    +L  L + DC+ LE LP  +  L+ L+ L +E        
Sbjct: 643  MSLWRSKKLKEVPD-LSKAPNLEELYLADCQSLEMLPSSIRYLKNLKTLNME-------- 693

Query: 451  KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          +CS  E LP+ + + +SL++L +  C      PD   N   + VL+
Sbjct: 694  --------------ECSKLEFLPTNINL-ESLSNLTLYGCSLIRSFPDISHN---ISVLS 735

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSL------KLSNNNLE 563
            ++ TAI EVP  + +++ L  L +S    L  I  ++++L  L  +       L+ ++ +
Sbjct: 736  LENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDVDFSLCYALTEDSWQ 795

Query: 564  RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVD 611
              P+ +   + +  LD+ +N   R+P  L S               S+P   TS    + 
Sbjct: 796  DDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIKPQELNIGNCRKLVSLPELQTSSLKILR 855

Query: 612  LRNCLKLD--------PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEI-PKWFRHQST 662
             ++C  L+        P  +   I    ++Q     + + K M  PG ++ P++F H+++
Sbjct: 856  AQDCESLESISHLFRNPETILHFINCFKLEQECLIRSSVFKYMILPGRQVPPEYFTHRAS 915

Query: 663  GSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYD 722
            GS +++   +   +   + F  C+++    ++    +S+   R C L       +   + 
Sbjct: 916  GSYLTIPLLESFLHGSFLRFKACLLIDTDSTKPTWVKSII--RVCCLLK---GNQGNHFH 970

Query: 723  SYTSSYLGKISHVESDHVFLGSSIFAGENSCKRS--DEFFFHIDRSCCEVKKCGIHF 777
            S     L  ++ +   H+ +    F  +N   +S  D          CE+K+CGI F
Sbjct: 971  SSDLHILIFVTRLLDRHLAIFDCSFPLDNPLAKSNYDAVEIKFGWDACEIKECGIQF 1027



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 142/349 (40%), Gaps = 83/349 (23%)

Query: 108 SLAQNLEILDL-GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
           SL++ L +L    Y  S   +  S  YL +L ++D    + +   P  +  KYLK + L 
Sbjct: 590 SLSRRLRLLHWDAYPMSRMPSDFSPAYLVELGMID-SELEKMWEGPQPL--KYLKNMSLW 646

Query: 167 GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
               LK +P ++                          N+ EL +  C+ LE + SSI  
Sbjct: 647 RSKKLKEVPDLSKA-----------------------PNLEELYLADCQSLEMLPSSIRY 683

Query: 227 LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
           L+ L+++ +  C  L+FL     NI+                              +SL+
Sbjct: 684 LKNLKTLNMEECSKLEFL---PTNIN-----------------------------LESLS 711

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           +L +  C      PD   N+  L+   ++ TAI E+P  + ++  L+ L +  C +L  I
Sbjct: 712 NLTLYGCSLIRSFPDISHNISVLS---LENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRI 768

Query: 347 SSSIFKLKSVESIEISNCSNL-----KGFPEI-----PFCNIDGSG--IERIPSSV---- 390
           S +I KLK +E ++ S C  L     +  P++     P  ++D S     R+P S+    
Sbjct: 769 SPNISKLKHLEDVDFSLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIK 828

Query: 391 ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
              L +  C KL SLP       SL  L   DC+ LE +     N E +
Sbjct: 829 PQELNIGNCRKLVSLPE--LQTSSLKILRAQDCESLESISHLFRNPETI 875


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 162/326 (49%), Gaps = 38/326 (11%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           +   LP E+G L  L +L + G  +  LP  +GQL+ L KL L + ++L  +  +I +L 
Sbjct: 81  DLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGD-NQLVILPVAIGQLG 139

Query: 355 SVESIEISNC------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------S 401
           +++ +++ +       + +     +   N+  + +  +P+ + +L    KL        +
Sbjct: 140 NLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTT 199

Query: 402 LPSSLCMFKSLTSLEIIDCK-KLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL-- 458
           LP+ +    +L   E+I C+ +L  LP E+G L  L++L + G  +  +P S+ QL+   
Sbjct: 200 LPAEIGQLHNLQ--ELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQ 257

Query: 459 -----SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
                S L L+       LP   Y+S           +N   LP +IG L  L+ L +  
Sbjct: 258 SITIDSHLLLELIDMVPHLPKLKYLS----------LRNLTTLPTKIGQLSNLQKLDLSD 307

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             I  +P+++GQLS+L+ L LS N L  +P+ + QL +L  L LS N L  +PE +D L 
Sbjct: 308 NQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATLPESIDQLH 367

Query: 574 SLKYLDLFEN----NLDRIPEYLRSF 595
           +L+ ++L +N    NLD +P  ++  
Sbjct: 368 NLQIINLRDNMLGYNLDVLPNSIQRL 393



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 3/187 (1%)

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLK 462
           + L + + L     +  K+   LP E+G L  L+EL +    + E+P  + QL  L KL 
Sbjct: 40  AELLVLQKLVLFRKLFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLD 99

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           L   +   +LP+ +    +L  L + D +  + LP  IG L  L+ L +    +  +P +
Sbjct: 100 L-TGNQLNTLPATIGQLSNLQKLSLGDNQ-LVILPVAIGQLGNLQELDLWHNQLTVLPAT 157

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +GQL +L+ L L +N L  +P  + QL +L  L L +N L  +P  +  L +L+ L L E
Sbjct: 158 IGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCE 217

Query: 583 NNLDRIP 589
           + L  +P
Sbjct: 218 DQLTTLP 224



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 166/367 (45%), Gaps = 57/367 (15%)

Query: 53  QFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL---------LTK 103
           QF L    I    NL  L +    +T+L  ++  L +L+++DL  ++L         L+ 
Sbjct: 58  QFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSN 117

Query: 104 LPDLSLAQ--------------NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLT 149
           L  LSL                NL+ LDL + + LT   ++I  L  L+VL+L R   LT
Sbjct: 118 LQKLSLGDNQLVILPVAIGQLGNLQELDL-WHNQLTVLPATIGQLGNLQVLNL-RENKLT 175

Query: 150 SLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIG 207
           +LP  I     L++L L G + L  LP ++   H    L L    +  LP  I  L N+ 
Sbjct: 176 TLPAGIGQLGNLQKLSL-GSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQ 234

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM-PSCNIDGTRSKEQPSSELKL 266
           +L +    +L  + +SI +L  L+SI I     L+ ++M P               +LK 
Sbjct: 235 KLYLLG-HQLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHL------------PKLKY 281

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
                  +LP+      +L  L++ D      LPD +G L  L +L + G  +  LP+ +
Sbjct: 282 LSLRNLTTLPTKIGQLSNLQKLDLSDN-QITALPDAIGQLSNLQKLNLSGNKLTALPDVI 340

Query: 327 GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERI 386
           GQL  L +L+L + ++L  +  SI +L +++ I + +             N+ G  ++ +
Sbjct: 341 GQLDNLQELDL-SGNKLATLPESIDQLHNLQIINLRD-------------NMLGYNLDVL 386

Query: 387 PSSVLKL 393
           P+S+ +L
Sbjct: 387 PNSIQRL 393


>gi|255569056|ref|XP_002525497.1| hypothetical protein RCOM_0740960 [Ricinus communis]
 gi|223535176|gb|EEF36855.1| hypothetical protein RCOM_0740960 [Ricinus communis]
          Length = 388

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 134/250 (53%), Gaps = 16/250 (6%)

Query: 77  VTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           V Q+     +LVSLK I+L  S+ LT  PDLS A+NLE ++  YC+SL E  SS+++L+K
Sbjct: 152 VYQVLTKNLSLVSLKEINLSNSEHLTTFPDLSHAKNLERMNFEYCTSLVEVPSSVRFLDK 211

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
           L   ++    SL S    I  + LK L L G SN +  P++      + L L    IEEL
Sbjct: 212 LIDWNMRYYTSLLSFLGGIKLRSLKTLNLFGYSNFREYPEIVEN--ITYLNLNETAIEEL 269

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL-QFLEMPSCNIDGTR 255
           P SI  L+ +  L +   +RL+N+  SI  L+ L +I +  C N+ +FL++ S +I    
Sbjct: 270 PRSISNLNGLIALNLKDYRRLKNLLESICLLKSLVTIDLFGCSNITRFLDI-SGDIRYLY 328

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
           S E              E +PS   +F  L+ L++++C   + LP E+  L +L +L++ 
Sbjct: 329 SSETI-----------IEEIPSSIGLFSRLSFLDLMNCKRLKNLPSEVSKLASLRKLVLS 377

Query: 316 G-TAIRELPE 324
           G + I + PE
Sbjct: 378 GCSGITKFPE 387



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 16/175 (9%)

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
           G    +SL +L +    NF   P+ + N+  LN   ++ TAI ELP  +  L  L  L L
Sbjct: 228 GGIKLRSLKTLNLFGYSNFREYPEIVENITYLN---LNETAIEELPRSISNLNGLIALNL 284

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
           K+   L+ +  SI  LKS+ +I++  CSN+  F +I         I  + SS       +
Sbjct: 285 KDYRRLKNLLESICLLKSLVTIDLFGCSNITRFLDI------SGDIRYLYSSE------T 332

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK 451
            +E +PSS+ +F  L+ L++++CK+L+ LP E+  L +L +L + G +GI + P+
Sbjct: 333 IIEEIPSSIGLFSRLSFLDLMNCKRLKNLPSEVSKLASLRKLVLSGCSGITKFPE 387



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 45/255 (17%)

Query: 284 SLTSLEIIDCPNFERL---PDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
           SL SL+ I+  N E L   PD L + + L R+  +  T++ E+P  +  L  L    ++ 
Sbjct: 161 SLVSLKEINLSNSEHLTTFPD-LSHAKNLERMNFEYCTSLVEVPSSVRFLDKLIDWNMRY 219

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEI----PFCNIDGSGIERIPSSV----- 390
            + L      I KL+S++++ +   SN + +PEI     + N++ + IE +P S+     
Sbjct: 220 YTSLLSFLGGI-KLRSLKTLNLFGYSNFREYPEIVENITYLNLNETAIEELPRSISNLNG 278

Query: 391 ---LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
              L L    +L++L  S+C+ KSL ++++  C  + R  D  G++  L       T I 
Sbjct: 279 LIALNLKDYRRLKNLLESICLLKSLVTIDLFGCSNITRFLDISGDIRYLYS---SETIIE 335

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           E+P S+                  L SRL      + L++++CK    LP E+  L  L+
Sbjct: 336 EIPSSIG-----------------LFSRL------SFLDLMNCKRLKNLPSEVSKLASLR 372

Query: 508 VLTIKG-TAIREVPE 521
            L + G + I + PE
Sbjct: 373 KLVLSGCSGITKFPE 387



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 32/257 (12%)

Query: 384 ERIPS-SVLKLNKCSKLESLPSSLCMFK---SLTSLEIIDCKKLERL---PDELGNLEAL 436
           E +P  SV +L K S+L S  +   +     SL SL+ I+    E L   PD L + + L
Sbjct: 130 EIVPQESVRELGKRSRLWSYDNVYQVLTKNLSLVSLKEINLSNSEHLTTFPD-LSHAKNL 188

Query: 437 EELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           E +  E  T + EVP S+  L  L    ++  +S  S    + + +SL +L +    NF 
Sbjct: 189 ERMNFEYCTSLVEVPSSVRFLDKLIDWNMRYYTSLLSFLGGIKL-RSLKTLNLFGYSNFR 247

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLV 553
             P+ + N+ YL    +  TAI E+P S+  L+ L  L L D   L+ + ES+  L SLV
Sbjct: 248 EYPEIVENITYL---NLNETAIEELPRSISNLNGLIALNLKDYRRLKNLLESICLLKSLV 304

Query: 554 SLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS-VD 611
           ++ L   +N+ R    LD    ++YL   E  ++ IP  +  F           RLS +D
Sbjct: 305 TIDLFGCSNITRF---LDISGDIRYLYSSETIIEEIPSSIGLFS----------RLSFLD 351

Query: 612 LRNCLKLD--PNELSEI 626
           L NC +L   P+E+S++
Sbjct: 352 LMNCKRLKNLPSEVSKL 368


>gi|95108210|emb|CAD18026.2| type III effector protein popc [Ralstonia solanacearum GMI1000]
          Length = 984

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 192/436 (44%), Gaps = 55/436 (12%)

Query: 166 RGCSNLKNLPKMT--SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
           R   +LK++ +M+  S  L+S LP     + ELP     ++++  L    C  L  + ++
Sbjct: 150 RAVDHLKSVLRMSGDSVQLKS-LP-----VPELPDVTFEIAHLKNLETVDCD-LHALPAT 202

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           +  L  LE++ +    N  F  +P         +E   SE  LK  P     P G     
Sbjct: 203 LENLFLLETLSLKGAKN--FKALPDAVWRLPALQELKLSETGLKSLP-----PVGGG--S 253

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L I D P  E+LP    +L  L  L +  T + +L  G+GQL  L  L L++  +L
Sbjct: 254 ALQRLTIEDSP-LEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKL 312

Query: 344 EYISSSIFKLKSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS---- 397
           E +  S+ +++ +  I   I    +  G   +    +D S + ++P+    L   +    
Sbjct: 313 ERLPKSLGQVEELTLIGGRIHALPSASGMSSLQKLTVDNSSLAKLPADFGALGNLAHVSL 372

Query: 398 ---KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
              KL  LP+S+    +L +L + D  KL  LP   G L  L+EL + G  I E+P    
Sbjct: 373 SNTKLRDLPASIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHELP---- 428

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
                   +   SS ++L               +D      LP + G L  L  L++  T
Sbjct: 429 -------SMGGASSLQTL--------------TVDDTALAGLPADFGALRNLAHLSLSNT 467

Query: 515 AIREVPESLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
            +RE+P + G L +L+ L L  N  L  +P SL  LS L  L L N+++  +P  + P S
Sbjct: 468 QLRELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSVSELPP-MGPGS 526

Query: 574 SLKYLDLFENNLDRIP 589
           +LK L +  + L  IP
Sbjct: 527 ALKTLTVENSPLTSIP 542



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSS 528
             +LP+ L     L +L +   KNF  LPD +  L  L+ L +  T ++ +P  +G  S+
Sbjct: 196 LHALPATLENLFLLETLSLKGAKNFKALPDAVWRLPALQELKLSETGLKSLPP-VGGGSA 254

Query: 529 LEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN-NLDR 587
           L+ L + D+ L+ +P     L  L SL LSN  LE++   +  L +LK L L +N  L+R
Sbjct: 255 LQRLTIEDSPLEQLPAGFADLDQLASLSLSNTKLEKLSSGIGQLPALKSLSLQDNPKLER 314

Query: 588 IPEYL 592
           +P+ L
Sbjct: 315 LPKSL 319



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 46/312 (14%)

Query: 86  NLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
            + SL+++ +  S L  KLP D     NL  + L   + L +  +SI  L  L+ L L  
Sbjct: 340 GMSSLQKLTVDNSSL-AKLPADFGALGNLAHVSL-SNTKLRDLPASIGNLFTLKTLSLQD 397

Query: 145 CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
              L SLP S      L+ L L G + +  LP M       TL +    +  LP+    L
Sbjct: 398 NPKLGSLPASFGQLSGLQELTLNG-NRIHELPSMGGASSLQTLTVDDTALAGLPADFGAL 456

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--NIDGTRSKEQPS 261
            N+  L + S  +L  + ++   L  L+++ +    N Q   +PS    + G        
Sbjct: 457 RNLAHLSL-SNTQLRELPANTGNLHALKTLSLQG--NQQLATLPSSLGYLSGLE------ 507

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG-NLQALNRLIIDGTAIR 320
            EL LK     E  P G     +L +L + + P    +P ++G   + L +L +  T +R
Sbjct: 508 -ELTLKNSSVSELPPMGPG--SALKTLTVENSP-LTSIPADIGIQCERLTQLSLSNTQLR 563

Query: 321 ELPEGLGQLALLSKLELKNCSELEYIS-------------------------SSIFKLKS 355
            LP  +G+L+ L  L LKN + LE +S                         SSI KL  
Sbjct: 564 ALPSSIGKLSNLKGLTLKNNARLELLSESGVRKLESVRKIDLSGCVRLTGLPSSIGKLPK 623

Query: 356 VESIEISNCSNL 367
           + ++++S C+ L
Sbjct: 624 LRTLDLSGCTGL 635


>gi|297837791|ref|XP_002886777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332618|gb|EFH63036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1023

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 15/245 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTE--------LRYFEWHQFPLKT 58
           E+ I+   F +M  L  ++     +   +H  E + F +        LR+  W  +P++ 
Sbjct: 550 ELHIHKRAFERMKNLDFIRI--YDDSLALHIQEKLHFPQGLDYLPPKLRFLSWDGYPMRC 607

Query: 59  L--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEIL 116
           L  N L  E+LV L+M  SK+ +LW+ V     L+ +D++ S  LT+LPDLS A NL  L
Sbjct: 608 LPSNFLP-EHLVVLRMRNSKLEKLWNGVHLPRLLEDMDMEGSSNLTELPDLSWAPNLTTL 666

Query: 117 DLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK 176
           +L  C SL E  SSI  L+ L+ L L+ C SL SLP +I    L RL L GCS     P 
Sbjct: 667 NLRNCPSLAEIPSSIMNLHCLKTLTLEDCTSLVSLPVNIDLISLYRLDLSGCSRFSRFPD 726

Query: 177 MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH 236
           ++     S L L    IEE+P  I     +  + ++ C +L+ IS +I +L+ LE     
Sbjct: 727 ISRN--ISFLILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGNISELKLLEKADFS 784

Query: 237 RCPNL 241
            C  L
Sbjct: 785 NCEAL 789



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 53/329 (16%)

Query: 371 PEIPFCNIDGSGIERIPSS-------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           P++ F + DG  +  +PS+       VL++ + SKLE L + + + + L  +++     L
Sbjct: 593 PKLRFLSWDGYPMRCLPSNFLPEHLVVLRM-RNSKLEKLWNGVHLPRLLEDMDMEGSSNL 651

Query: 424 ERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
             LPD L     L  L +     + E+P S+  L  L  L L+ C+S  SLP  + +  S
Sbjct: 652 TELPD-LSWAPNLTTLNLRNCPSLAEIPSSIMNLHCLKTLTLEDCTSLVSLPVNIDLI-S 709

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQ 540
           L  L++  C  F R PD   N+ +L    +  TAI EVP  + +   L  + + +   L+
Sbjct: 710 LYRLDLSGCSRFSRFPDISRNISFL---ILNQTAIEEVPWWINKFPKLICIEMWECTKLK 766

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP 600
            I  ++++L  L     SN          + L+   ++              R+   ++ 
Sbjct: 767 YISGNISELKLLEKADFSN---------CEALTKASWIG-------------RTTVVAMV 804

Query: 601 SEFTSLRLSV-DLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
           +E    +L V +  NC KLD   L        ++QSV       K +  PG ++P +F +
Sbjct: 805 AENNHTKLPVLNFINCFKLDQETL--------IQQSV------FKHLILPGEKVPSYFTN 850

Query: 660 QSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
           Q+TG+++ +   Q +   + + F  C+VV
Sbjct: 851 QATGNSLVIHLLQSSFSQEFLRFRVCLVV 879



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 16/138 (11%)

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLE 289
            PNL  L + +C        E PSS         L L+ C    SLP    +  SL  L+
Sbjct: 660 APNLTTLNLRNC----PSLAEIPSSIMNLHCLKTLTLEDCTSLVSLPVNIDLI-SLYRLD 714

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           +  C  F R PD   N+  L   I++ TAI E+P  + +   L  +E+  C++L+YIS +
Sbjct: 715 LSGCSRFSRFPDISRNISFL---ILNQTAIEEVPWWINKFPKLICIEMWECTKLKYISGN 771

Query: 350 IFKLKSVESIEISNCSNL 367
           I +LK +E  + SNC  L
Sbjct: 772 ISELKLLEKADFSNCEAL 789



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 301 DELGNLQALNRLIID-----GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           ++L N   L RL+ D      + + ELP+ L     L+ L L+NC  L  I SSI  L  
Sbjct: 628 EKLWNGVHLPRLLEDMDMEGSSNLTELPD-LSWAPNLTTLNLRNCPSLAEIPSSIMNLHC 686

Query: 356 VESIEISNCSNLKGFPE----IPFCNIDGSG---IERIPS-----SVLKLNKCSKLESLP 403
           ++++ + +C++L   P     I    +D SG     R P      S L LN+ + +E +P
Sbjct: 687 LKTLTLEDCTSLVSLPVNIDLISLYRLDLSGCSRFSRFPDISRNISFLILNQTA-IEEVP 745

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
             +  F  L  +E+ +C KL+ +   +  L+ LE+
Sbjct: 746 WWINKFPKLICIEMWECTKLKYISGNISELKLLEK 780


>gi|297837527|ref|XP_002886645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332486|gb|EFH62904.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1037

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNK-CMVHSLEGVPFTELRYFEWHQFPLKTLNI-LH 63
           S++ ++   F +M  L+ L      ++ C+   L+  P   L+   W  +P K+L I  +
Sbjct: 539 SKVFVSEGAFKRMRNLQFLSVSDENDRICIPEDLQFPP--RLKLLHWEAYPRKSLPIRFY 596

Query: 64  WENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
            ENLV L M  S++ +LW   Q L +LK++DL  S+ L +LPDLS A NL+ L+L  C S
Sbjct: 597 LENLVELDMQNSQLEKLWKGPQLLTNLKKMDLSMSRHLKELPDLSNATNLKRLNLDDCES 656

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L E  SS   L+KL+VL +  C  L  +PT ++   L+ + +  C  LKN P ++   L+
Sbjct: 657 LVEIPSSFSNLHKLKVLSMFACTKLEVIPTRMNLASLESVNMTACQRLKNFPDISRNILQ 716

Query: 184 STLPLLGVGIEELPSSIKCLSNI 206
            ++ L    +E++P+SI+  S +
Sbjct: 717 LSISL--TAVEQVPASIRLWSRL 737



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 193/462 (41%), Gaps = 120/462 (25%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L+++N S+LE +      L +++ +++S   +LK  P++     + + ++R     L
Sbjct: 600 LVELDMQN-SQLEKLWKGPQLLTNLKKMDLSMSRHLKELPDLS----NATNLKR-----L 649

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
            L+ C  L  +PSS      L  L +  C KLE +P  + NL +LE              
Sbjct: 650 NLDDCESLVEIPSSFSNLHKLKVLSMFACTKLEVIPTRM-NLASLE-------------- 694

Query: 452 SLAQLALSKLKLKKCSSFESLP--SR--LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
                    + +  C   ++ P  SR  L +S SLT++E        ++P  I     L+
Sbjct: 695 --------SVNMTACQRLKNFPDISRNILQLSISLTAVE--------QVPASIRLWSRLR 738

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
           VL I       +  S G+L +L            +P+S+  L       LS   +ERIP 
Sbjct: 739 VLNI-------IITSNGKLKALTH----------VPQSVRHLI------LSYTGVERIPY 775

Query: 568 RLDPLSSLKYLDLFENNLDRIPEYLRSF---------PTSIPSEFTSLRLSVDLRNCLKL 618
                 SL  L L+ N   ++ + LR+          P   P  +T L  +    NC KL
Sbjct: 776 ---CKKSLHRLQLYLNGSRKLADSLRNDCEPMEQLICPYDTP--YTQLNYT----NCFKL 826

Query: 619 DPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK 678
           D            +++++  ++++      PG E+P+ F H++ G+++++         +
Sbjct: 827 DSK----------VQRAIITQSFVQGWACLPGREVPEEFEHRARGNSLTI---------R 867

Query: 679 LMG-FAFCVVVACSVSECCRHESVEDDRKCNLFD-VVCDRRSEG--YDSYTSSYLGKISH 734
           LMG     ++  C V        +  ++K   F+ ++C R  +G  Y       +  I  
Sbjct: 868 LMGDMPLTILKVCVV--------ISPNQKTREFEQLLCRRMGKGNAYLPIDEISVYTIPR 919

Query: 735 VESDHVFL-GSSIFAGENSCK-RSDEFFFHIDRSCCEVKKCG 774
           ++  H+FL  S +F  E  C+  S E  F    S  E+ +CG
Sbjct: 920 IQRKHLFLFHSYLFEEERFCEVTSRELVFEFS-SELEIVECG 960



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 13/166 (7%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           E L  G  +  +L  +++    + + LPD L N   L RL +D   ++ E+P     L  
Sbjct: 611 EKLWKGPQLLTNLKKMDLSMSRHLKELPD-LSNATNLKRLNLDDCESLVEIPSSFSNLHK 669

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIP 387
           L  L +  C++LE I + +  L S+ES+ ++ C  LK FP+I       +I  + +E++P
Sbjct: 670 LKVLSMFACTKLEVIPTRM-NLASLESVNMTACQRLKNFPDISRNILQLSISLTAVEQVP 728

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLE------IIDCKKLERLP 427
           +S+   ++   L  + +S    K+LT +       I+    +ER+P
Sbjct: 729 ASIRLWSRLRVLNIIITSNGKLKALTHVPQSVRHLILSYTGVERIP 774


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLQNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L ++P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 175/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLQNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L  + + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNVLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LQNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP---- 270
            +L  +   I +LQ L+ +                ++DG +    P +  +L++      
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRLQTLYL 332

Query: 271 ---RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
              +   LP+     ++L SL+ ++      LP E+G LQ L  L +    +  LPE + 
Sbjct: 333 GNNQLNVLPNKVEQLQNLESLD-LEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 161/317 (50%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 176/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             P+ +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPKEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++ + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +  +L++  +   
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLTTLPENIGQLQRL-QTLY 331

Query: 275 LPSGQCMF-----KSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
           L + Q  F     + L +LE +D  +     LP E+G LQ L  L +    +  LPE + 
Sbjct: 332 LGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|224114295|ref|XP_002332392.1| predicted protein [Populus trichocarpa]
 gi|222832715|gb|EEE71192.1| predicted protein [Populus trichocarpa]
          Length = 350

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 78/396 (19%)

Query: 353 LKSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIPSSV--------LKLNKCS 397
           ++S++   +  CS L+ FP+I           +D +GI ++ SS+        L +N C 
Sbjct: 1   MESLKVFTLDGCSKLEKFPDIVGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCK 60

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
            LES+PSS+   KSL  L++  C +L+ L + LG +E+LEE  V GT IR+         
Sbjct: 61  TLESIPSSIGCLKSLKKLDLSGCSELKYLTENLGKVESLEEFDVSGTLIRQ--------- 111

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
                         LP+ +++ K+L  L +  CK    LP  +  L  L+VL ++   +R
Sbjct: 112 --------------LPASVFLLKNLKVLSLDGCKRIAVLPS-LSGLCSLEVLGLRACNLR 156

Query: 518 E--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           E  + E +G LSSL  L LS NN   +P+S+N+LS L  L L    +  +   L+  S +
Sbjct: 157 EGALLEDIGCLSSLRSLDLSQNNFVSLPKSINKLSELEMLVLEGCTM--LQSLLEVPSKV 214

Query: 576 KYLDLFEN-NLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKL----DPNELSEIIKDG 630
           + ++L    +L  IP+ + +  +S  SEF  L       NC +L      + +  ++ + 
Sbjct: 215 QIVNLNGCISLKTIPDPI-TLSSSKRSEFICL-------NCWELYYHNGQDNMGLMMLER 266

Query: 631 WMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVAC 690
           +++   N        +  PGNEIP WF HQS GS+IS++ P  +     +GF  CV    
Sbjct: 267 YLQGLSNPRPGF--GIVVPGNEIPGWFNHQSKGSSISVQVPSWS-----IGFVACVAF-- 317

Query: 691 SVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTS 726
               C   E            V CD ++ G +++ S
Sbjct: 318 ----CANGERP---------SVFCDFKANGRENFPS 340



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 27/239 (11%)

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
            +SL    +  C   E+ PD +GN+  L  L +D T I +L   +  L  L  L + +C 
Sbjct: 1   MESLKVFTLDGCSKLEKFPDIVGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCK 60

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS----- 389
            LE I SSI  LKS++ +++S CS LK   E       +   ++ G+ I ++P+S     
Sbjct: 61  TLESIPSSIGCLKSLKKLDLSGCSELKYLTENLGKVESLEEFDVSGTLIRQLPASVFLLK 120

Query: 390 ---VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE----RLPDELGNLEALEELRVE 442
              VL L+ C ++  LPS       L SLE++  +        L +++G L +L  L + 
Sbjct: 121 NLKVLSLDGCKRIAVLPS----LSGLCSLEVLGLRACNLREGALLEDIGCLSSLRSLDLS 176

Query: 443 GTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
                 +PKS+ +L+ L  L L+ C+  +SL   L V   +  + +  C +   +PD I
Sbjct: 177 QNNFVSLPKSINKLSELEMLVLEGCTMLQSL---LEVPSKVQIVNLNGCISLKTIPDPI 232



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 11/156 (7%)

Query: 89  SLKRIDLKYSKLLTKLPDLSLAQN-LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKS 147
           SLK   L     L K PD+    N L +L L   + +T+  SSI +L  L +L ++ CK+
Sbjct: 3   SLKVFTLDGCSKLEKFPDIVGNMNKLMVLRLDE-TGITKLSSSIHHLIGLGLLSMNSCKT 61

Query: 148 LTSLPTSIHS-KYLKRLVLRGCSNLK----NLPKMTSCHLRSTLPLLGVGIEELPSSIKC 202
           L S+P+SI   K LK+L L GCS LK    NL K+ S        + G  I +LP+S+  
Sbjct: 62  LESIPSSIGCLKSLKKLDLSGCSELKYLTENLGKVESLE---EFDVSGTLIRQLPASVFL 118

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
           L N+  L +  CKR+  +  S+  L  LE + +  C
Sbjct: 119 LKNLKVLSLDGCKRIA-VLPSLSGLCSLEVLGLRAC 153



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 30/235 (12%)

Query: 160 LKRLVLRGCSNLKNLPKMTS-CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           LK   L GCS L+  P +    +    L L   GI +L SSI  L  +G L + SCK LE
Sbjct: 4   LKVFTLDGCSKLEKFPDIVGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKTLE 63

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFL--------EMPSCNIDGTRSKEQPSSELKLKK-- 268
           +I SSI  L+ L+ + +  C  L++L         +   ++ GT  ++ P+S   LK   
Sbjct: 64  SIPSSIGCLKSLKKLDLSGCSELKYLTENLGKVESLEEFDVSGTLIRQLPASVFLLKNLK 123

Query: 269 ------CPRPESLPSGQCMFKSLTSLEIID---CPNFE-RLPDELGNLQALNRLIIDGTA 318
                 C R   LPS       L SLE++    C   E  L +++G L +L  L +    
Sbjct: 124 VLSLDGCKRIAVLPS----LSGLCSLEVLGLRACNLREGALLEDIGCLSSLRSLDLSQNN 179

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS-VESIEISNCSNLKGFPE 372
              LP+ + +L+ L  L L+ C+ L+    S+ ++ S V+ + ++ C +LK  P+
Sbjct: 180 FVSLPKSINKLSELEMLVLEGCTMLQ----SLLEVPSKVQIVNLNGCISLKTIPD 230


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 27/321 (8%)

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
           L K P   S+P+       L  L ++ C   ++ P+   N+  L R+ +D + I+E+P  
Sbjct: 561 LTKMPELSSMPN-------LEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSS 613

Query: 326 LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN------ID 379
           +  L  L  L L  C   +    +   L+ +  I  +N +++K  PEI          + 
Sbjct: 614 IEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVIN-ANRTDIKELPEIHNMGSLTKLFLI 672

Query: 380 GSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
            + I+ +P S+        L L  C  L SLP+S+C  KSL  L +  C  L   P+ + 
Sbjct: 673 ETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIME 732

Query: 432 NLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           ++E L EL +  T I E+P S+  L  L  L+LK C +  +LP  +     L SL + +C
Sbjct: 733 DMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNC 792

Query: 491 KNFMRLPDEIGNLEY-LKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLN 547
                LPD + +L++ L+ L + G  + +  +P  L  LS L +L +S+  +  IP ++ 
Sbjct: 793 SKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIPIPCIPTNII 852

Query: 548 QLSSLVSLKLSN-NNLERIPE 567
           QLS+L +L++++   LE IPE
Sbjct: 853 QLSNLRTLRMNHCQMLEEIPE 873



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 160/357 (44%), Gaps = 38/357 (10%)

Query: 131 IQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLL 189
           +Q L  L+++DL R + LT +P       L+ L L  C  LK  P++     R   + L 
Sbjct: 544 MQILGNLKIIDLSRSRLLTKMPELSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHLD 603

Query: 190 GVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
             GI+E+PSSI+ L  +  L ++ C+  +    +   L+ L  I  +R       E+P  
Sbjct: 604 CSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVINANRT---DIKELPEI 660

Query: 250 NIDG---------TRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
           +  G         T  KE P S        EL L+ C    SLP+  C  KSL  L +  
Sbjct: 661 HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNG 720

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C N    P+ + +++ L  L++  T I ELP  +  L  L  LELKNC  L  +  SI  
Sbjct: 721 CSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGN 780

Query: 353 LKSVESIEISNCSNLKGFPE----IPFC--NIDGSGIE----RIPS-----SVLKLNKCS 397
           L  + S+ + NCS L   P+    + +C   +D +G       IPS     S+L+    S
Sbjct: 781 LTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVS 840

Query: 398 K--LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           +  +  +P+++    +L +L +  C+ LE +P+    LE LE       G    P S
Sbjct: 841 EIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTLSTPSS 897



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 43/347 (12%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG----------------------- 119
           ++Q L +LK IDL  S+LLTK+P+LS   NLE L+L                        
Sbjct: 543 EMQILGNLKIIDLSRSRLLTKMPELSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHL 602

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            CS + E  SSI+YL  LE L L  C++    P +  +    R++    +++K LP++ +
Sbjct: 603 DCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVINANRTDIKELPEIHN 662

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
               + L L+   I+ELP SI  L+ + EL + +CK L ++ +SI  L+ L  + ++ C 
Sbjct: 663 MGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCS 722

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           NL        +++  R       EL L K P  E  PS + + K L  LE+ +C N   L
Sbjct: 723 NLVAFPEIMEDMEDLR-------ELLLSKTPITELPPSIEHL-KGLEHLELKNCENLVTL 774

Query: 300 PDELGNLQALNRLIIDG-TAIRELPEGLGQLAL-LSKLELKNCSELE-YISSSIFKLKSV 356
           PD +GNL  L  L +   + +  LP+ L  L   L +L+L  C+ ++  I S ++ L  +
Sbjct: 775 PDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLL 834

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
             +++S         EIP   I  + I+      L++N C  LE +P
Sbjct: 835 RFLDVS---------EIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIP 872



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 127/251 (50%), Gaps = 29/251 (11%)

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           ++ L++   L  +P  L    +L  L ++ C++L++ P+   N+  LE + ++ +GI+E+
Sbjct: 552 IIDLSRSRLLTKMPE-LSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEI 610

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK--NFMRLPDEIGNLEYL 506
           P S+  L AL  L L  C +F+  P       +L  L +I+    +   LP EI N+  L
Sbjct: 611 PSSIEYLPALEFLTLHYCRNFDKFPDNF---GNLRHLRVINANRTDIKELP-EIHNMGSL 666

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLER 564
             L +  TAI+E+P S+G L+ LE L L +  NL+ +P S+  L SL  L L+  +NL  
Sbjct: 667 TKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVA 726

Query: 565 IPERLDPLSSLKYLDLFENNLDRIP-----------------EYLRSFPTSIPSEFTSLR 607
            PE ++ +  L+ L L +  +  +P                 E L + P SI    T LR
Sbjct: 727 FPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSI-GNLTHLR 785

Query: 608 LSVDLRNCLKL 618
            S+ +RNC KL
Sbjct: 786 -SLCVRNCSKL 795



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 30/188 (15%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E+L  L +  + +T+L   +++L  L+ ++LK  + L  LPD                  
Sbjct: 735 EDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPD------------------ 776

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY--LKRLVLRGCSNLKN-LPKMTSC- 180
                SI  L  L  L +  C  L +LP ++ S    L+RL L GC+ +K  +P    C 
Sbjct: 777 -----SIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCL 831

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            L   L +  + I  +P++I  LSN+  L +  C+ LE I     +L+ LE+     CP+
Sbjct: 832 SLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEA---QGCPH 888

Query: 241 LQFLEMPS 248
           L  L  PS
Sbjct: 889 LGTLSTPS 896


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P+ + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 70/386 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             P+ +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPKEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++   I +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPKEIGQLRNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSL 415
            LK N   +L +LP  +   K+L  L
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKL 399



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 131/312 (41%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP---- 270
            +L  +   I +LQ L+ +                ++DG +    P +  +L++      
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLTTLPENIGQLQRLQTLYL 332

Query: 271 ---RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
              +   LP      ++L SL+ ++      LP E+G LQ L  L +    +  LPE + 
Sbjct: 333 GNNQLNFLPKEIGQLRNLESLD-LEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEALKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P+ + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 175/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++   I +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPKEIGQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 140/329 (42%), Gaps = 65/329 (19%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +   + +  R ++
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLTTLPEN---IGQLQRLQT 329

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           L  G                NF  LP E+G LQ L  L ++   +  LP+ +G+L  L  
Sbjct: 330 LYLGNNQL------------NF--LPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQT 375

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISN 363
           L LK  ++L  +   I +LK+++ + + N
Sbjct: 376 LNLK-YNQLATLPEEIKQLKNLKKLYLHN 403



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEALKNPQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
 gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
          Length = 632

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 220/468 (47%), Gaps = 60/468 (12%)

Query: 213 SCKRLENISSSIFKLQFLESIR-IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCP- 270
           + ++L++I   +   + +ES++ I   PNL  LEM   N+DG    E P   +KL+    
Sbjct: 92  TLRKLQSIKYLLAMEEKIESLQGISYLPNL--LEM---NLDGNHINEIPEEIVKLESLDK 146

Query: 271 ------RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPE 324
                 R   +P+     K L  L++    +   LP E+GN+  L+RL I    I+E+P 
Sbjct: 147 LILSRNRLNKVPTYIGAMKKLRWLDV-SKNSLTSLPKEIGNIITLDRLDISQNKIKEIPS 205

Query: 325 GLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC------SNLKGFPEIPFCNI 378
            +  L  L +L L   +EL    S I  L  +  + + N        N+  FPE+ +  I
Sbjct: 206 EINNLKKLIRL-LAYENELTTFPSDIVGLPVLRELNLFNNMITELPDNIGSFPELMYLRI 264

Query: 379 DGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
             + +  +P S+ +L K        ++L +LP ++     LT + +    KLERLPD +G
Sbjct: 265 GENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSKLTEINL-SNNKLERLPDNIG 323

Query: 432 NLEALEELRVEGTGIREVPK--SLAQLALSKLKLKKCSSFES--LPSRL-YVSKS---LT 483
            L +++EL ++   I+  P   +L  L    +      +FE   LP+ + Y+  S   LT
Sbjct: 324 RLTSVKELNLDNNNIKIFPDLSNLVDLKTIYISNNNIINFEIDFLPTSVQYIDLSRNLLT 383

Query: 484 SLEIIDCKNFMRLP--------DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           S+ II+    + L         + I ++  +  L + G  I+ +P+++G + +L  + LS
Sbjct: 384 SVPIIENIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLS 443

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           +N L  IP     L +L  L LSNN L  IP  L  +++L++L L  N L          
Sbjct: 444 NNKLVEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRL---------- 493

Query: 596 PTSIPSEFTSLR--LSVDLRN--CLKLDPNELSEIIKDGWMKQSVNGE 639
            T IP E  ++     VDL N    KL+ ++ + ++ DG   +++ G+
Sbjct: 494 -TIIPKEIGTIEKLKKVDLSNNYLTKLEFSDKANVLADGNFIENMEGQ 540



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 25/269 (9%)

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           +K+ L+    ++Y+ +   K++S++ I           P +   N+DG+ I  IP  ++K
Sbjct: 89  NKITLRKLQSIKYLLAMEEKIESLQGISY--------LPNLLEMNLDGNHINEIPEEIVK 140

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L    KL         +P+ +   K L  L++     L  LP E+GN+  L+ L +    
Sbjct: 141 LESLDKLILSRNRLNKVPTYIGAMKKLRWLDV-SKNSLTSLPKEIGNIITLDRLDISQNK 199

Query: 446 IREVPKSLAQLALSKLKLKKCSSFE----SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG 501
           I+E+P  +  L     KL +  ++E    + PS +     L  L + +      LPD IG
Sbjct: 200 IKEIPSEINNLK----KLIRLLAYENELTTFPSDIVGLPVLRELNLFNNM-ITELPDNIG 254

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
           +   L  L I    +  +PES+G+L  L  L +++N L  +P+++  LS L  + LSNN 
Sbjct: 255 SFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSKLTEINLSNNK 314

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRIPE 590
           LER+P+ +  L+S+K L+L  NN+   P+
Sbjct: 315 LERLPDNIGRLTSVKELNLDNNNIKIFPD 343



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 42/216 (19%)

Query: 384 ERIPSSVLKLNKCS--KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           ++IP   ++ NK +  KL+S+   L M + + SL+ I       LP+ L       E+ +
Sbjct: 81  QKIPD--IESNKITLRKLQSIKYLLAMEEKIESLQGISY-----LPNLL-------EMNL 126

Query: 442 EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
           +G  I E+P+ + +L +L KL L +        +RL                  ++P  I
Sbjct: 127 DGNHINEIPEEIVKLESLDKLILSR--------NRLN-----------------KVPTYI 161

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           G ++ L+ L +   ++  +P+ +G + +L+ L +S N ++ IP  +N L  L+ L    N
Sbjct: 162 GAMKKLRWLDVSKNSLTSLPKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYEN 221

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            L   P  +  L  L+ L+LF N +  +P+ + SFP
Sbjct: 222 ELTTFPSDIVGLPVLRELNLFNNMITELPDNIGSFP 257



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 14/159 (8%)

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEII-----------DCKNFMRLPD 498
           P+ +  +  +K+ L+K  S + L   L + + + SL+ I           D  +   +P+
Sbjct: 80  PQKIPDIESNKITLRKLQSIKYL---LAMEEKIESLQGISYLPNLLEMNLDGNHINEIPE 136

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           EI  LE L  L +    + +VP  +G +  L WL +S N+L  +P+ +  + +L  L +S
Sbjct: 137 EIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPKEIGNIITLDRLDIS 196

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            N ++ IP  ++ L  L  L  +EN L   P  +   P 
Sbjct: 197 QNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPV 235


>gi|4850296|emb|CAB43052.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
 gi|7267816|emb|CAB81218.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
          Length = 1174

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 19/266 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS---KNKCMVH---SLEGVPF-TELRYFEWHQ 53
           M +I  E+ I+  TF +M  L  LKF  S    +K  V      EG+ +  +LR   W  
Sbjct: 536 MCEIKEELYISEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLPQLRLLHWDA 595

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           +PL+   +    E LV L M  SK+ +LW  VQ L +L+ ++L  S+ L  LP+L  A  
Sbjct: 596 YPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATK 655

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  LDLG+C SL E  SSI+ L  L +L++  CK L  +PT+I+   L+ L  R C+ L+
Sbjct: 656 LNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQ 715

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKL--- 227
             P++ S ++R  L L+G  I E+P S+K  S I E+ +     KRL ++   + KL   
Sbjct: 716 TFPEI-STNIR-LLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLCLR 773

Query: 228 --QFLESI--RIHRCPNLQFLEMPSC 249
             + LE+I   +   P LQ +++  C
Sbjct: 774 ENKELETIPRYLKYLPRLQMIDISYC 799



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 56/386 (14%)

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS-----V 390
           E++N   L++  SS    K    +++     L   P++   + D   +E  PSS     +
Sbjct: 552 EMRNLVYLKFYMSSPIDDKMKVKLQLPE-EGLSYLPQLRLLHWDAYPLEFFPSSFRPECL 610

Query: 391 LKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALEELRVEGTGIR 447
           ++LN   SKL+ L S +   ++L ++ +   + LE LP+  E   L  L+    E   + 
Sbjct: 611 VELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCES--LV 668

Query: 448 EVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID---CKNFMRLPDEIGNL 503
           E+P S+  L  L  L++  C   E +P+ +    +L SLE++    C      P+   N+
Sbjct: 669 ELPSSIKNLQHLILLEMSCCKKLEIIPTNI----NLPSLEVLHFRYCTRLQTFPEISTNI 724

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD---NNLQIIPESLNQLSSLVSLKLSNN 560
              ++L + GTAI EVP S+   S ++ + +       L  +P  L +L     L+  N 
Sbjct: 725 ---RLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLC----LR-ENK 776

Query: 561 NLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPS--------------EFTS 605
            LE IP  L  L  L+ +D+ +  N+  +P+     P S+ +               F +
Sbjct: 777 ELETIPRYLKYLPRLQMIDISYCINIISLPK----LPGSVSALTAVNCESLQILHGHFRN 832

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGST 665
             + ++  NCLKL      +I +  ++ QS    +YI   +  PG  +P +F ++STGS+
Sbjct: 833 KSIHLNFINCLKLGQRAQEKIHRSVYIHQS----SYIADVL--PGEHVPAYFSYRSTGSS 886

Query: 666 ISLKTPQPTGYNKLMGFAFCVVVACS 691
           I + + +    +K   F  C+V+   
Sbjct: 887 IMIHSNK-VDLSKFNRFKVCLVLGAG 911


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 168/310 (54%), Gaps = 26/310 (8%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +G+L  L +L L + ++L  +   I KL++++ 
Sbjct: 150 LPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTD-NQLTTLPKEIEKLQNLQW 208

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
           + ++N + L   P+       +   +++ + +  +P  + KL          ++L +LP 
Sbjct: 209 LGLNN-NQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPK 267

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
            +   + L  L + +  +L  LP E+G L+ L+ELR++   +  +P+ + +L     KLK
Sbjct: 268 EIGKLQHLQELHL-ENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQ----KLK 322

Query: 465 KCSS----FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           K  S    F ++P  ++  ++L +L +   +    LP EIGNL+ L++L +    +  +P
Sbjct: 323 KLYSSGNQFTTVPEEIWNLQNLQALNLYSNQ-LTSLPKEIGNLQNLQLLYLSDNQLATLP 381

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           + +G+L +L+ L LSDN L  +P+ + +L +L  L LS+N L  +P+ ++ L SL+YL L
Sbjct: 382 KEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYL 441

Query: 581 FENNLDRIPE 590
            +N L   PE
Sbjct: 442 SDNPLTSFPE 451



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +LP  +   ++L  L++      M LP EIG L+ L+ L +    +  +PE +G+L +L+
Sbjct: 126 TLPKEIGKLQNLRDLDL-SSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQ 184

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L L+DN L  +P+ + +L +L  L L+NN L  +P+ +  L  L+ L L  N L  +P+
Sbjct: 185 ELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPK 244



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 167/382 (43%), Gaps = 57/382 (14%)

Query: 80  LW---DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL--GYCSSLTETHSSIQYL 134
           LW    ++  L +L+ +DL  ++L+T   ++   QNL+ L+L     ++L E    +Q L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 183

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPK-MTSCHLRSTLPLLGV 191
            +L + D      LT+LP  I    L+ L   G +N  L  LPK +        L L   
Sbjct: 184 QELHLTD----NQLTTLPKEIEK--LQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENN 237

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +  LP  I  L N+ + L  S  +L  +   I KLQ L+ + +    N Q   +P    
Sbjct: 238 QLTTLPKEIGKLQNL-QWLGLSNNQLTTLPKEIGKLQHLQELHLE---NNQLTTLPK--- 290

Query: 252 DGTRSKEQPSSELKL---KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
                K Q   EL+L   +    PE +   Q + K  +S        F  +P+E+ NLQ 
Sbjct: 291 --EIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSS-----GNQFTTVPEEIWNLQN 343

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L  L +    +  LP+ +G L  L  L L + ++L  +   I KL++++ + +S+     
Sbjct: 344 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSD-NQLATLPKEIGKLQNLQLLYLSD----- 397

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCK 421
                       + +  +P  + KL          ++L +LP  +   +SL  L + D  
Sbjct: 398 ------------NQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSD-N 444

Query: 422 KLERLPDELGNLEALEELRVEG 443
            L   P+E+G L+ L+ LR+E 
Sbjct: 445 PLTSFPEEIGKLQHLKWLRLEN 466



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 136/319 (42%), Gaps = 46/319 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L +++  L +L+ + L  ++L T   ++   QNL+ L L   + L
Sbjct: 158 QNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLN-NNQL 216

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPKMTS--C 180
           T     I  L KLE L L+  + LT+LP  I    L+ L   G SN  L  LPK      
Sbjct: 217 TTLPKEIGKLQKLEALHLENNQ-LTTLPKEIGK--LQNLQWLGLSNNQLTTLPKEIGKLQ 273

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------- 233
           HL+  L L    +  LP  I  L N+ EL +    RL  +   I KLQ L+ +       
Sbjct: 274 HLQE-LHLENNQLTTLPKEIGKLQNLQELRL-DYNRLTTLPEEIEKLQKLKKLYSSGNQF 331

Query: 234 -----RIHRCPNLQFLEMPSCNIDG--------TRSKEQPSSELKLKKCPRP-ESLPSGQ 279
                 I    NLQ L + S  +             +    S+ +L   P+    L + Q
Sbjct: 332 TTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQ 391

Query: 280 CMFKS---LTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPE 324
            ++ S   LT+L  EI    N + L          P E+ NLQ+L  L +    +   PE
Sbjct: 392 LLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPE 451

Query: 325 GLGQLALLSKLELKNCSEL 343
            +G+L  L  L L+N   L
Sbjct: 452 EIGKLQHLKWLRLENIPTL 470


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 254/558 (45%), Gaps = 49/558 (8%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLT 125
           L++L   G  V QL +++  +  L+ +DL   K + KLP +L+  QNL++L+L  C +LT
Sbjct: 25  LLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGI-KLPNELTKLQNLKVLNLNDC-NLT 82

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KMTSCH 181
              + +  L +L+ L L   +++  LP  +      R++    +N+  +P    ++T  H
Sbjct: 83  TVPAVVMKLPQLQTLILSNNENII-LPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLH 141

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP-- 239
              TL L    +  L + I  LSN+  L +  C  L  +   I++L  L  + +   P  
Sbjct: 142 ---TLELGSNTLNVLNAEIGLLSNMEHLNLSKCN-LHTLPLEIWRLIQLRWLDVRFNPIQ 197

Query: 240 ----------NLQFLEMPSCNIDGTRSKEQPSSELK-LKKCPRP-ESLPSGQCMFKSLTS 287
                     N++ L +  C +     +    ++L+ L  C    ++LP       ++  
Sbjct: 198 MLPAGVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKH 257

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L +  C N   LP E+G L  L  L +    ++ LP  +GQL  +   +L  C +L  + 
Sbjct: 258 LYLHSC-NMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLC-KLRTLP 315

Query: 348 SSIFKLKSVESIEISNC------SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
             + +L  +E +E+S        ++++    +   ++    +  +P  V  L +      
Sbjct: 316 PEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVM 375

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             + L+ L + +    ++ S  +  C +L  LP E+G L  L  L +    ++ +P +L 
Sbjct: 376 IRNPLQMLTTDVQHIINIESFNLSQC-QLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLG 434

Query: 455 QL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTI 511
           QL ++  L L  C    +LP  L     LT +E +D        L  E+G L  +K L +
Sbjct: 435 QLSSIRHLDLSHC-KLHTLPREL---GKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDM 490

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
               +  +P  +G+L+ LEWL LS N L+ +P  + QL+++  L +S   L  +P  +  
Sbjct: 491 SECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPEVGR 550

Query: 572 LSSLKYLDLFENNLDRIP 589
           L  LK+L+L  N L  +P
Sbjct: 551 LEQLKWLNLSSNPLQALP 568



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 174/361 (48%), Gaps = 35/361 (9%)

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           E+LP+EL  ++ L  L + G    +LP  L +L  L  L L +C+ L  + + + KL  +
Sbjct: 36  EQLPEELYGIEELEALDLTGKKGIKLPNELTKLQNLKVLNLNDCN-LTTVPAVVMKLPQL 94

Query: 357 ESIEISNCSN------LKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
           +++ +SN  N      + G   I    ++ + +  +P+ V +L     LE   ++L +  
Sbjct: 95  QTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLHTLELGSNTLNVLN 154

Query: 411 S----LTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
           +    L+++E ++  K  L  LP E+  L  L  L V    I+ +P  + QL  +  L L
Sbjct: 155 AEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNL 214

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIID-CKNFMR-LPDEIGNLEYLKVLTIKGTAIREVPE 521
             C     LP  +    +LT LE +D C N ++ LP E+  L  +K L +    +  +P 
Sbjct: 215 SYCK-LRILPPEI---GNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPP 270

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            +G+L+ L+WL LS NNLQ +P  + QL+++    LS   L  +P  +  L+ L++L+L 
Sbjct: 271 EVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELS 330

Query: 582 ENNLDRIPEYLRSFP------------TSIPSE---FTSLRLSVDLRNCLKLDPNELSEI 626
           +N L  +P  +R               T +P E    T L   V +RN L++   ++  I
Sbjct: 331 QNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHI 390

Query: 627 I 627
           I
Sbjct: 391 I 391



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 128/548 (23%), Positives = 242/548 (44%), Gaps = 82/548 (14%)

Query: 82  DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           D++  L +++ + L  + ++T    +    +L  L+LG  ++L   ++ I  L+ +E L+
Sbjct: 109 DEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLHTLELG-SNTLNVLNAEIGLLSNMEHLN 167

Query: 142 LDRCKSLTSLPTSIHS----KYLK------RLVLRGCSNLKNLPKM--TSCHLRSTLP-- 187
           L +C +L +LP  I      ++L       +++  G   L N+  +  + C LR   P  
Sbjct: 168 LSKC-NLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEI 226

Query: 188 ----------LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
                     L G  ++ LP  ++ L+N+  L ++SC  +  +   + +L          
Sbjct: 227 GNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCN-MHTLPPEVGRLT--------- 276

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
              LQ+L + S N+                     ++LPS      ++   ++  C    
Sbjct: 277 --QLQWLGLSSNNL---------------------QTLPSEIGQLTNIKHFDLSLC-KLR 312

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP E+G L  L  L +    ++ LP  + QL  L  L++  C +L  +   +  L  +E
Sbjct: 313 TLPPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYC-QLTLLPREVGALTQLE 371

Query: 358 S-IEISN-----CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
             + I N      ++++    I   N+    +  +P  + +L          + L+ LP 
Sbjct: 372 CLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPP 431

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
           +L    S+  L++  CK L  LP ELG L  +E L +    ++ +   + QL  +  L +
Sbjct: 432 NLGQLSSIRHLDLSHCK-LHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDM 490

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
            +C    S+P  +     LT LE +   +     LP E+G L  +  L +    +R +P 
Sbjct: 491 SECK-LHSIPPEV---GKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPP 546

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
            +G+L  L+WL LS N LQ +P  + QL+++ +L LS+  L  +P  +  L+ L+ L++ 
Sbjct: 547 EVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLERLNVS 606

Query: 582 ENNLDRIP 589
           +N L  +P
Sbjct: 607 DNPLQTLP 614



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 59/292 (20%)

Query: 58  TLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           T ++ H  N+ S  +   ++T L  ++  L  L+ +DL Y+ L    P+L    ++  LD
Sbjct: 384 TTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLD 443

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L +C  L      +  L ++E LD      L+  P  +    + +L     +N+K+L  M
Sbjct: 444 LSHC-KLHTLPRELGKLTQIEWLD------LSFNPLQVLLAEVGQL-----TNVKHL-DM 490

Query: 178 TSCHLRSTLPLLGV------------GIEELPSSIKCLSNIGELLIYSCKRLENISSSIF 225
           + C L S  P +G              ++ LP  +  L+N+  L +  CK L  +   + 
Sbjct: 491 SECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECK-LRTLPPEVG 549

Query: 226 KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
           +L+            L++L + S  +                     ++LP+      ++
Sbjct: 550 RLE-----------QLKWLNLSSNPL---------------------QALPAQIGQLNNI 577

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
            +L++  C     LP E+G L  L RL +    ++ LP  +  L  +S L++
Sbjct: 578 QNLDLSSC-ELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVHLTNISHLKI 628


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 264/608 (43%), Gaps = 115/608 (18%)

Query: 33  CMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKR 92
           C + + E  P T +   +  Q PL         N+  L + G K+T L  ++  L +L+ 
Sbjct: 25  CEIQADEDEPGTYMDLTKALQNPL---------NVRVLNLSGEKLTALPKEIGQLKNLQE 75

Query: 93  IDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
           ++LK++ LLT LP ++   +NL+ LDL   + L    + I  L KLE LDL   + L  L
Sbjct: 76  LNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFPAVIVELQKLESLDLSENR-LIIL 132

Query: 152 PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
           P  I               L+NL           L L    +   P  I  L N+ +L +
Sbjct: 133 PNEI-------------GRLQNL---------QDLGLYKNKLTTFPKEIGQLQNLQKLWL 170

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
            S  RL  +   I +L+ L+++ +      QF  +P                   K+  +
Sbjct: 171 -SENRLTALPKEIGQLKNLQTLDLQDN---QFTILP-------------------KEIGQ 207

Query: 272 PESLPSGQCMFKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAI 319
            ++L +       L +L  EI    N ++L          P E+G LQ L  L      +
Sbjct: 208 LQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCSNLKGFPEI----P 374
             LP+ +GQL  L  L L N + L      I +L++++ +E+  N  +LK    I    P
Sbjct: 268 TALPKEMGQLQNLQTLNLVN-NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFP 326

Query: 375 FCNID-----GSGIERI-------PSSVLKLNKCSK--LESLPSSLCMFKSLTSLEIIDC 420
             N+D      +G+ R        P  V +L+   K   +S P  +  F++L  L + DC
Sbjct: 327 DSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC 386

Query: 421 ------KKLERL----------------PDELGNLEALEELRVEGTGIREVPKSLAQLA- 457
                 K++ RL                P E+G L+ LE L +E   +  +PK + QL  
Sbjct: 387 GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRN 446

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L KL L + ++ +  P+ +   K L  L++     F   P EIG LE L+ L ++   + 
Sbjct: 447 LQKLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKLENLQTLNLQRNQLT 504

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +   +GQL +L+ L L+DN   ++P+ + +L  L +L L NN L  +P  +  L +L++
Sbjct: 505 NLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQW 564

Query: 578 LDLFENNL 585
           L L  N L
Sbjct: 565 LYLQNNQL 572



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 24/260 (9%)

Query: 374 PFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
           P   +D +   + P +V  LN    KL +LP  +   K+L  L +     L  LP E+G 
Sbjct: 34  PGTYMDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNL-KWNLLTTLPKEIGQ 92

Query: 433 LEALEELRVEGTGIREVP------KSLAQLALSKLKL----KKCSSFESLPSRLYVSKSL 482
           LE L+EL +    +   P      + L  L LS+ +L     +    ++L         L
Sbjct: 93  LENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKL 152

Query: 483 TSL--EIIDCKNFMRL----------PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           T+   EI   +N  +L          P EIG L+ L+ L ++      +P+ +GQL +L+
Sbjct: 153 TTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQ 212

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L LSDN L  +P  + QL +L  L L NN L   P+ +  L +L+ L   EN L  +P+
Sbjct: 213 TLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK 272

Query: 591 YLRSFPTSIPSEFTSLRLSV 610
            +            + RL+V
Sbjct: 273 EMGQLQNLQTLNLVNNRLTV 292


>gi|2853078|emb|CAA16928.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268747|emb|CAB78953.1| TMV resistance protein N-like [Arabidopsis thaliana]
          Length = 1164

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 149/293 (50%), Gaps = 25/293 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK-----NKCMVHSLEGVPF---TELRYFEWH 52
           MS++   I++ P  F+ +++L+ LKF  S      +   +     VP     EL Y  W 
Sbjct: 543 MSEVR-RIKLFPAAFTMLSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQ 601

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            +P   L +    + LV L +  S + QLW+D +N  SL+ +DL  SK L  L  LS A+
Sbjct: 602 GYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAK 661

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE LDL  C+SL +   S++ +N+L  L+L  C SL SLP     K LK L+L GC  L
Sbjct: 662 NLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKL 720

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K+   ++      +L L G  IE +   I+ L ++  L + +C++L+ + + ++KL+ L+
Sbjct: 721 KDFHIISES--IESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQ 778

Query: 232 SIRIHRCPNLQFL----EMPSC----NIDGTRSKEQPS----SELKLKKCPRP 272
            + +  C  L+ L    E   C     +DGT  K+ P     S LK+    RP
Sbjct: 779 ELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKICSFCRP 831



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 144/332 (43%), Gaps = 63/332 (18%)

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           S + + K++E +++  C++L         ++ GS  +      L L  C+ LESLP    
Sbjct: 655 SGLSRAKNLERLDLEGCTSL---------DLLGSVKQMNELIYLNLRDCTSLESLPKGFK 705

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKC 466
           + KSL +L +  C KL+   D     E++E L +EGT I  V + +  L +L  L LK C
Sbjct: 706 I-KSLKTLILSGCLKLK---DFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNC 761

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
              + LP+ LY  KSL  L +  C     LP     +E L++L + GT+I++ PE     
Sbjct: 762 EKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPE----- 816

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNL 585
                                 +S L +LK+ +     I +     S+  YLD     +L
Sbjct: 817 ----------------------MSCLSNLKICSFCRPVIDD-----STGLYLDAHGCGSL 849

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK- 644
           + +     S P +IP     +  +    +C KL+  E  +I+    +K  +   T     
Sbjct: 850 ENV-----SKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHN 904

Query: 645 ----------SMYFPGNEIPKWFRHQSTGSTI 666
                     ++ FPG++IP WF HQ  GS I
Sbjct: 905 HKGLLLDPLVAVCFPGHDIPSWFSHQKMGSLI 936



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L   + L RL ++G    +L   + Q+  L  L L++C+ LE +    FK+KS++++ +S
Sbjct: 657 LSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKG-FKIKSLKTLILS 715

Query: 363 NCSNLKGF----PEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFK 410
            C  LK F      I   +++G+ IER+   +        L L  C KL+ LP+ L   K
Sbjct: 716 GCLKLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLK 775

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           SL  L +  C  LE LP     +E LE L ++GT I++ P+
Sbjct: 776 SLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPE 816



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)

Query: 237 RCPNLQFLEMPSC---NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
           R  NL+ L++  C   ++ G+  +      L L+ C   ESLP G    KSL +L +  C
Sbjct: 659 RAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKG-FKIKSLKTLILSGC 717

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
               +L D     +++  L ++GTAI  + E +  L  L  L LKNC +L+Y+ + ++KL
Sbjct: 718 L---KLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKL 774

Query: 354 KSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIP 387
           KS++ + +S CS L+  P I           +DG+ I++ P
Sbjct: 775 KSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP 815


>gi|15237080|ref|NP_192855.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|75100697|sp|O82500.1|Y4117_ARATH RecName: Full=Putative disease resistance protein At4g11170
 gi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteins
           [Arabidopsis thaliana]
 gi|332657580|gb|AEE82980.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1095

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 19/266 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS-----KNKCMVH-SLEGVPF-TELRYFEWHQ 53
           M +I  E+ I+  TF +M  L  LKF  S     K K  +    EG+ +  +LR   W  
Sbjct: 536 MCEIKEELYISEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYLPQLRLLHWDA 595

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           +PL+   +    E LV L M  SK+ +LW  VQ L +L+ ++L  S+ L  LP+L  A  
Sbjct: 596 YPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATK 655

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L  LDLG+C SL E  SSI+ L  L +L++  CK L  +PT+I+   L+ L  R C+ L+
Sbjct: 656 LNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNINLPSLEVLHFRYCTRLQ 715

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKL--- 227
             P++ S ++R  L L+G  I E+P S+K  S I E+ +     KRL ++   + KL   
Sbjct: 716 TFPEI-STNIR-LLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLCLR 773

Query: 228 --QFLESI--RIHRCPNLQFLEMPSC 249
             + LE+I   +   P LQ +++  C
Sbjct: 774 ENKELETIPRYLKYLPRLQMIDISYC 799



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 56/386 (14%)

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS-----V 390
           E++N   L++  SS    K    +++     L   P++   + D   +E  PSS     +
Sbjct: 552 EMRNLVYLKFYMSSPIDDKMKVKLQLPE-EGLSYLPQLRLLHWDAYPLEFFPSSFRPECL 610

Query: 391 LKLNKC-SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD--ELGNLEALEELRVEGTGIR 447
           ++LN   SKL+ L S +   ++L ++ +   + LE LP+  E   L  L+    E   + 
Sbjct: 611 VELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCES--LV 668

Query: 448 EVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID---CKNFMRLPDEIGNL 503
           E+P S+  L  L  L++  C   E +P+ +    +L SLE++    C      P+   N+
Sbjct: 669 ELPSSIKNLQHLILLEMSCCKKLEIIPTNI----NLPSLEVLHFRYCTRLQTFPEISTNI 724

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD---NNLQIIPESLNQLSSLVSLKLSNN 560
              ++L + GTAI EVP S+   S ++ + +       L  +P  L +L     L+  N 
Sbjct: 725 ---RLLNLIGTAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLC----LR-ENK 776

Query: 561 NLERIPERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPS--------------EFTS 605
            LE IP  L  L  L+ +D+ +  N+  +P+     P S+ +               F +
Sbjct: 777 ELETIPRYLKYLPRLQMIDISYCINIISLPK----LPGSVSALTAVNCESLQILHGHFRN 832

Query: 606 LRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGST 665
             + ++  NCLKL      +I +  ++ QS    +YI   +  PG  +P +F ++STGS+
Sbjct: 833 KSIHLNFINCLKLGQRAQEKIHRSVYIHQS----SYIADVL--PGEHVPAYFSYRSTGSS 886

Query: 666 ISLKTPQPTGYNKLMGFAFCVVVACS 691
           I + + +    +K   F  C+V+   
Sbjct: 887 IMIHSNK-VDLSKFNRFKVCLVLGAG 911


>gi|30684793|ref|NP_849410.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658793|gb|AEE84193.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 149/293 (50%), Gaps = 25/293 (8%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK-----NKCMVHSLEGVPF---TELRYFEWH 52
           MS++   I++ P  F+ +++L+ LKF  S      +   +     VP     EL Y  W 
Sbjct: 536 MSEVR-RIKLFPAAFTMLSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQ 594

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            +P   L +    + LV L +  S + QLW+D +N  SL+ +DL  SK L  L  LS A+
Sbjct: 595 GYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAK 654

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE LDL  C+SL +   S++ +N+L  L+L  C SL SLP     K LK L+L GC  L
Sbjct: 655 NLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKL 713

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           K+   ++      +L L G  IE +   I+ L ++  L + +C++L+ + + ++KL+ L+
Sbjct: 714 KDFHIISES--IESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQ 771

Query: 232 SIRIHRCPNLQFL----EMPSC----NIDGTRSKEQPS----SELKLKKCPRP 272
            + +  C  L+ L    E   C     +DGT  K+ P     S LK+    RP
Sbjct: 772 ELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKICSFCRP 824



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 144/332 (43%), Gaps = 63/332 (18%)

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           S + + K++E +++  C++L         ++ GS  +      L L  C+ LESLP    
Sbjct: 648 SGLSRAKNLERLDLEGCTSL---------DLLGSVKQMNELIYLNLRDCTSLESLPKGFK 698

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKC 466
           + KSL +L +  C KL+   D     E++E L +EGT I  V + +  L +L  L LK C
Sbjct: 699 I-KSLKTLILSGCLKLK---DFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNC 754

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
              + LP+ LY  KSL  L +  C     LP     +E L++L + GT+I++ PE     
Sbjct: 755 EKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPE----- 809

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNL 585
                                 +S L +LK+ +     I +     S+  YLD     +L
Sbjct: 810 ----------------------MSCLSNLKICSFCRPVIDD-----STGLYLDAHGCGSL 842

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITK- 644
           + +     S P +IP     +  +    +C KL+  E  +I+    +K  +   T     
Sbjct: 843 ENV-----SKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHN 897

Query: 645 ----------SMYFPGNEIPKWFRHQSTGSTI 666
                     ++ FPG++IP WF HQ  GS I
Sbjct: 898 HKGLLLDPLVAVCFPGHDIPSWFSHQKMGSLI 929



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L   + L RL ++G    +L   + Q+  L  L L++C+ LE +    FK+KS++++ +S
Sbjct: 650 LSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKG-FKIKSLKTLILS 708

Query: 363 NCSNLKGF----PEIPFCNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFK 410
            C  LK F      I   +++G+ IER+   +        L L  C KL+ LP+ L   K
Sbjct: 709 GCLKLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLK 768

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
           SL  L +  C  LE LP     +E LE L ++GT I++ P+
Sbjct: 769 SLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTPE 809



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 14/161 (8%)

Query: 237 RCPNLQFLEMPSC---NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
           R  NL+ L++  C   ++ G+  +      L L+ C   ESLP G    KSL +L +  C
Sbjct: 652 RAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKG-FKIKSLKTLILSGC 710

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
               +L D     +++  L ++GTAI  + E +  L  L  L LKNC +L+Y+ + ++KL
Sbjct: 711 L---KLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKL 767

Query: 354 KSVESIEISNCSNLKGFPEIP-------FCNIDGSGIERIP 387
           KS++ + +S CS L+  P I           +DG+ I++ P
Sbjct: 768 KSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP 808


>gi|297734799|emb|CBI17033.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 152/303 (50%), Gaps = 20/303 (6%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L ++ C   ++ P+   N+  L R+ +D + I+E+P  +  L  L  L L  C   
Sbjct: 9   NLEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNF 68

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCN------IDGSGIERIPSSV------- 390
           +    +   L+ +  I  +N +++K  PEI          +  + I+ +P S+       
Sbjct: 69  DKFPDNFGNLRHLRVIN-ANRTDIKELPEIHNMGSLTKLFLIETAIKELPRSIGHLTELE 127

Query: 391 -LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
            L L  C  L SLP+S+C  KSL  L +  C  L   P+ + ++E L EL +  T I E+
Sbjct: 128 ELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITEL 187

Query: 450 PKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY-LK 507
           P S+  L  L  L+LK C +  +LP  +     L SL + +C     LPD + +L++ L+
Sbjct: 188 PPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLR 247

Query: 508 VLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLER 564
            L + G  + +  +P  L  LS L +L +S+  +  IP ++ QLS+L +L++++   LE 
Sbjct: 248 RLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQMLEE 307

Query: 565 IPE 567
           IPE
Sbjct: 308 IPE 310



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 44/340 (12%)

Query: 148 LTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLSNI 206
           L+S+P       L+ L L  C  LK  P++     R   + L   GI+E+PSSI+ L  +
Sbjct: 4   LSSMPN------LEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPAL 57

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG---------TRSK 257
             L ++ C+  +    +   L+ L  I  +R       E+P  +  G         T  K
Sbjct: 58  EFLTLHYCRNFDKFPDNFGNLRHLRVINANR---TDIKELPEIHNMGSLTKLFLIETAIK 114

Query: 258 EQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
           E P S        EL L+ C    SLP+  C  KSL  L +  C N    P+ + +++ L
Sbjct: 115 ELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDL 174

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
             L++  T I ELP  +  L  L  LELKNC  L  +  SI  L  + S+ + NCS L  
Sbjct: 175 RELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKLHN 234

Query: 370 FPE----IPFC--NIDGSGIE----RIPS-----SVLKLNKCSK--LESLPSSLCMFKSL 412
            P+    + +C   +D +G       IPS     S+L+    S+  +  +P+++    +L
Sbjct: 235 LPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIPIPCIPTNIIQLSNL 294

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            +L +  C+ LE +P+    LE LE       G    P S
Sbjct: 295 RTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTLSTPSS 334



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 163/326 (50%), Gaps = 24/326 (7%)

Query: 83  DVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY--CSSLTETHSSIQYLNKLEVL 140
           ++ ++ +L+ ++L   + L K P++   +N+  L+  +  CS + E  SSI+YL  LE L
Sbjct: 3   ELSSMPNLEELNLVCCERLKKFPEIR--ENMGRLERVHLDCSGIQEIPSSIEYLPALEFL 60

Query: 141 DLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSI 200
            L  C++    P +  +    R++    +++K LP++ +    + L L+   I+ELP SI
Sbjct: 61  TLHYCRNFDKFPDNFGNLRHLRVINANRTDIKELPEIHNMGSLTKLFLIETAIKELPRSI 120

Query: 201 KCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQP 260
             L+ + EL + +CK L ++ +SI  L+ L  + ++ C NL        +++  R     
Sbjct: 121 GHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDLR----- 175

Query: 261 SSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII-DGTAI 319
             EL L K P  E  PS +   K L  LE+ +C N   LPD +GNL  L  L + + + +
Sbjct: 176 --ELLLSKTPITELPPSIE-HLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKL 232

Query: 320 RELPEGLGQLAL-LSKLELKNCSELE-YISSSIFKLKSVESIEISNCSNLKGFPEIPFCN 377
             LP+ L  L   L +L+L  C+ ++  I S ++ L  +  +++S         EIP   
Sbjct: 233 HNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVS---------EIPIPC 283

Query: 378 IDGSGIERIPSSVLKLNKCSKLESLP 403
           I  + I+      L++N C  LE +P
Sbjct: 284 IPTNIIQLSNLRTLRMNHCQMLEEIP 309



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 28/230 (12%)

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSF 469
           +L  L ++ C++L++ P+   N+  LE + ++ +GI+E+P S+  L AL  L L  C +F
Sbjct: 9   NLEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNF 68

Query: 470 ESLPSRLYVSKSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
           +  P       +L  L +I+    +   LP EI N+  L  L +  TAI+E+P S+G L+
Sbjct: 69  DKFPDNF---GNLRHLRVINANRTDIKELP-EIHNMGSLTKLFLIETAIKELPRSIGHLT 124

Query: 528 SLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNL 585
            LE L L +  NL+ +P S+  L SL  L L+  +NL   PE ++ +  L+ L L +  +
Sbjct: 125 ELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPI 184

Query: 586 DRIP-----------------EYLRSFPTSIPSEFTSLRLSVDLRNCLKL 618
             +P                 E L + P SI    T LR S+ +RNC KL
Sbjct: 185 TELPPSIEHLKGLEHLELKNCENLVTLPDSI-GNLTHLR-SLCVRNCSKL 232



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 30/188 (15%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E+L  L +  + +T+L   +++L  L+ ++LK  + L  LPD                  
Sbjct: 172 EDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPD------------------ 213

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY--LKRLVLRGCSNLKN-LPKMTSC- 180
                SI  L  L  L +  C  L +LP ++ S    L+RL L GC+ +K  +P    C 
Sbjct: 214 -----SIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCL 268

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
            L   L +  + I  +P++I  LSN+  L +  C+ LE I     +L+ LE+     CP+
Sbjct: 269 SLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEA---QGCPH 325

Query: 241 LQFLEMPS 248
           L  L  PS
Sbjct: 326 LGTLSTPS 333


>gi|124010197|ref|ZP_01694853.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
 gi|123983741|gb|EAY24168.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
          Length = 515

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 208/450 (46%), Gaps = 65/450 (14%)

Query: 158 KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
           KYL+ L+++ C NLK LP+       S L +    +  LP SI  + N+   L+ +   L
Sbjct: 78  KYLRDLIIK-CKNLKTLPENFGELNLSFLRIKSDSLIALPKSISKIKNL-SYLVLNVNSL 135

Query: 218 ENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPS 277
             +   I KLQ L+ + I R  NL+ L               P S  KL+K         
Sbjct: 136 TRLPKGIGKLQKLQRLEI-RSNNLRVL---------------PKSIGKLQK--------- 170

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
                  L +L +        LP  +G LQ L +LI+   A+++LP+ +G+L  L +L L
Sbjct: 171 -------LDTLRL-QAHGLRALPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVL 222

Query: 338 ---------KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
                    KN S+L  +      ++S+ ++  S    +  FPE+    ++ + +  +  
Sbjct: 223 QANRLTTLPKNLSQLPKLKKMTLIVRSLHTLPKS----IGNFPELEMLELEVNSLVALTP 278

Query: 389 SVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            + +  +         +  +LP S+   ++L  L +++   L  LP+ +GNL+ L  L++
Sbjct: 279 GIGQFKRLKYLKIVNGRFATLPQSIGDLQNLEMLFLLNVP-LTTLPEGIGNLKKLRRLQI 337

Query: 442 EGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             + +  +P+++  L  L +L  +    +   PS     +SL   E         LP+ I
Sbjct: 338 LKSKLTTLPEAIGNLKNLRELLFR----YRYKPS----GESLRYREGGRNGQLATLPESI 389

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           G L+ L +L +    + ++P+S+G L +LE++ LS N L   P+S ++LS L SL  ++N
Sbjct: 390 GKLQNLVLLNLSHNQLTQLPKSIGNLQNLEYMDLSYNRLITFPDSFSKLSRLGSLYSNHN 449

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L  +P+ +  L  L YL L  N L  +PE
Sbjct: 450 QLTSLPKSIGALKGLMYLQLRYNQLKALPE 479



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 8/214 (3%)

Query: 384 ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
            RI + VL  +  + L    S L   + L    II CK L+ LP+  G L  L  LR++ 
Sbjct: 55  RRIKAMVLYGDNVTNLSPRISELKYLRDL----IIKCKNLKTLPENFGELN-LSFLRIKS 109

Query: 444 TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
             +  +PKS++++  LS L L   +S   LP  +   + L  LEI    N   LP  IG 
Sbjct: 110 DSLIALPKSISKIKNLSYLVLN-VNSLTRLPKGIGKLQKLQRLEI-RSNNLRVLPKSIGK 167

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L+ L  L ++   +R +P+S+G+L +L+ L+L  + L+ +P+S+ +L +L  L L  N L
Sbjct: 168 LQKLDTLRLQAHGLRALPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQANRL 227

Query: 563 ERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
             +P+ L  L  LK + L   +L  +P+ + +FP
Sbjct: 228 TTLPKNLSQLPKLKKMTLIVRSLHTLPKSIGNFP 261



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 78/128 (60%), Gaps = 3/128 (2%)

Query: 464 KKCSSFE-SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           K+ SS E +L +++  S+ + ++ ++   N   L   I  L+YL+ L IK   ++ +PE+
Sbjct: 38  KRFSSVEDALATQVKSSRRIKAM-VLYGDNVTNLSPRISELKYLRDLIIKCKNLKTLPEN 96

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
            G+L +L +L +  ++L  +P+S++++ +L  L L+ N+L R+P+ +  L  L+ L++  
Sbjct: 97  FGEL-NLSFLRIKSDSLIALPKSISKIKNLSYLVLNVNSLTRLPKGIGKLQKLQRLEIRS 155

Query: 583 NNLDRIPE 590
           NNL  +P+
Sbjct: 156 NNLRVLPK 163


>gi|449482311|ref|XP_004156244.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1676

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 21/279 (7%)

Query: 86   NLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC 145
            NLV LK I L  S+ L+K P+ +   NL+ L+L  C+SL   H SI    KL  L L  C
Sbjct: 1169 NLVELKYIKLNSSQKLSKTPNFANIPNLKRLELEDCTSLVNIHPSIFTAEKLIFLSLKDC 1228

Query: 146  KSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR-STLPLLGVGIEELPSSIKCLS 204
             +LT+LP+ I+ K L+ L+L GCS +K +P+ +    R   L L G  I  LPSSI  LS
Sbjct: 1229 INLTNLPSHINIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLS 1288

Query: 205  NIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL-------QFLEMPSCNIDGTRSK 257
            ++  L + +CK L +IS++I ++  L+S+ +  C  L         +E+   N+  T  +
Sbjct: 1289 HLTILSLANCKMLIDISNAI-EMTSLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRR 1347

Query: 258  EQPSS------ELKLKKCPRPES----LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             +         E+ L  C  P +    +PS   ++ SLT L + DC N E +P  +  + 
Sbjct: 1348 RRNDDCNNIFKEIFLWLCNTPATGIFGIPSLAGLY-SLTKLNLKDC-NLEVIPQGIECMV 1405

Query: 308  ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            +L  L + G     LP  + +L  L +L +  C +L + 
Sbjct: 1406 SLVELDLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHF 1444



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 185/436 (42%), Gaps = 68/436 (15%)

Query: 306  LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI----EI 361
            LQ + R I+    +R+      +L     ++  N  EL+YI     KL S + +      
Sbjct: 1142 LQEMGRKIVRDKHVRD------RLMCHKDIKSVNLVELKYI-----KLNSSQKLSKTPNF 1190

Query: 362  SNCSNLKGFPEIPFC----NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
            +N  NLK   E+  C    NI  S         L L  C  L +LPS + + K L  L +
Sbjct: 1191 ANIPNLKRL-ELEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHINI-KVLEVLIL 1248

Query: 418  IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
              C K++++P+  GN   L +L ++GT I  +P S+A L+ L+ L L  C     + + +
Sbjct: 1249 SGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAI 1308

Query: 477  YVSKSLTSLEIIDCKNFMRLPDEIGNLE-------------------------YLKVLTI 511
             ++ SL SL++  C        +  N+E                         +L +   
Sbjct: 1309 EMT-SLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRRRRNDDCNNIFKEIFLWLCNT 1367

Query: 512  KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
              T I  +P SL  L SL  L L D NL++IP+ +  + SLV L LS NN   +P  +  
Sbjct: 1368 PATGIFGIP-SLAGLYSLTKLNLKDCNLEVIPQGIECMVSLVELDLSGNNFSHLPTSISR 1426

Query: 572  LSSLKYLDLFE-NNLDRIPEY--------------LRSFPTSIPSEFTSLRLSVDLRNCL 616
            L +LK L + +   L   P+               L+ F      +   +   V+L NC 
Sbjct: 1427 LHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCISLKDFIDISKVDNLYIMKEVNLLNCY 1486

Query: 617  KLDPN-ELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
            ++  N +   +I     K      T+   ++  PG+EIP WF  +  GS++ ++      
Sbjct: 1487 QMANNKDFHRLIISSMQKMFFRKGTF---NIMIPGSEIPDWFTTRKMGSSVCMEWDPDAP 1543

Query: 676  YNKLMGFAFCVVVACS 691
               ++ FA CVV+  S
Sbjct: 1544 NTNMIRFALCVVIGLS 1559


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 264/608 (43%), Gaps = 115/608 (18%)

Query: 33  CMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKR 92
           C + + E  P T +   +  Q PL         N+  L + G K+T L  ++  L +L+ 
Sbjct: 25  CEIQADEDEPGTYMDLTKALQNPL---------NVRVLNLSGEKLTALPKEIGQLKNLQE 75

Query: 93  IDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSL 151
           ++LK++ LLT LP ++   +NL+ LDL   + L    + I  L KLE LDL   + L  L
Sbjct: 76  LNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFPAVIVELQKLESLDLSENR-LIIL 132

Query: 152 PTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
           P  I               L+NL           L L    +   P  I  L N+ +L +
Sbjct: 133 PNEI-------------GRLQNL---------QDLGLYKNKLTTFPKEIGQLQNLQKLWL 170

Query: 212 YSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPR 271
            S  RL  +   I +L+ L+++ +      QF  +P                   K+  +
Sbjct: 171 -SENRLTALPKEIGQLKNLQTLDLQDN---QFTILP-------------------KEIGQ 207

Query: 272 PESLPSGQCMFKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAI 319
            ++L +       L +L  EI    N ++L          P E+G LQ L  L      +
Sbjct: 208 LQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCSNLKGFPEI----P 374
             LP+ +GQL  L  L L N + L      I +L++++ +E+  N  +LK    I    P
Sbjct: 268 TALPKEMGQLQNLQTLNLVN-NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFP 326

Query: 375 FCNID-----GSGIERI-------PSSVLKLNKCSK--LESLPSSLCMFKSLTSLEIIDC 420
             N+D      +G+ R        P  V +L+   K   +S P  +  F++L  L + DC
Sbjct: 327 DSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC 386

Query: 421 ------KKLERL----------------PDELGNLEALEELRVEGTGIREVPKSLAQLA- 457
                 K++ RL                P E+G L+ LE L +E   +  +PK + QL  
Sbjct: 387 GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRN 446

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L KL L + ++ +  P+ +   K L  L++     F   P EIG LE L+ L ++   + 
Sbjct: 447 LQKLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKLENLQTLNLQRNQLT 504

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
            +   +GQL +L+ L L+DN   ++P+ + +L  L +L L NN L  +P  +  L +L++
Sbjct: 505 NLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQW 564

Query: 578 LDLFENNL 585
           L L  N L
Sbjct: 565 LYLQNNQL 572



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 24/260 (9%)

Query: 374 PFCNIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
           P   +D +   + P +V  LN    KL +LP  +   K+L  L +     L  LP E+G 
Sbjct: 34  PGTYMDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNL-KWNLLTTLPKEIGQ 92

Query: 433 LEALEELRVEGTGIREVP------KSLAQLALSKLKL----KKCSSFESLPSRLYVSKSL 482
           LE L+EL +    +   P      + L  L LS+ +L     +    ++L         L
Sbjct: 93  LENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKL 152

Query: 483 TSL--EIIDCKNFMRL----------PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           T+   EI   +N  +L          P EIG L+ L+ L ++      +P+ +GQL +L+
Sbjct: 153 TTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQ 212

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L LSDN L  +P  + QL +L  L L NN L   P+ +  L +L+ L   EN L  +P+
Sbjct: 213 TLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK 272

Query: 591 YLRSFPTSIPSEFTSLRLSV 610
            +            + RL+V
Sbjct: 273 EMGQLQNLQTLNLVNNRLTV 292


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 165/339 (48%), Gaps = 53/339 (15%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L RL +   ++  LP+ +GQL        +N  EL+   +S+  L     
Sbjct: 63  LPKEIGQLQNLQRLDLSFNSLTTLPKEIGQL--------RNLQELDLSFNSLTTLPK--- 111

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
            E+    NL+                      L L++ ++L +LP  +   K+L  L++ 
Sbjct: 112 -EVGQLENLQR---------------------LDLHQ-NRLATLPMEIGQLKNLQELDL- 147

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  KL  LP E+  L  L+EL +    +  +PK + QL  L  L L   +   +LP  + 
Sbjct: 148 NSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLI-VTQLTTLPKEIG 206

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+WL L  N
Sbjct: 207 ELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 265

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT 597
            L  +P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN L           T
Sbjct: 266 QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL-----------T 314

Query: 598 SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           ++P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 315 TLPKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 349



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 162/336 (48%), Gaps = 46/336 (13%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L ++   +  LP+ + QL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCN 377
             L +L+L N ++L  +   I +L++++++            EI    NLK        N
Sbjct: 163 RNLQELDL-NSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL------N 215

Query: 378 IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           +  + +  +P  + +L          +++ +LP  +   ++L  L++    +L  LP E+
Sbjct: 216 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTTLPKEI 274

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           G L+ L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L ++D
Sbjct: 275 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRVLD 330

Query: 490 CKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
             N     LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ + 
Sbjct: 331 LDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIG 390

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           QL +L  L L  N L   P+ +  L +L+ L L+ N
Sbjct: 391 QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 189/413 (45%), Gaps = 69/413 (16%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKL 137
           T L   +QN + ++ +DL+Y KL T   ++   QNL+ LDL + +SLT     I  L  L
Sbjct: 38  TDLAKTLQNPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSF-NSLTTLPKEIGQLRNL 96

Query: 138 EVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRS--TLPLLGVGIE 194
           + LDL    SLT+LP  +   + L+RL L   + L  LP M    L++   L L    + 
Sbjct: 97  QELDLS-FNSLTTLPKEVGQLENLQRLDLHQ-NRLATLP-MEIGQLKNLQELDLNSNKLT 153

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP  I+ L N+ EL + S K L  +   I +LQ L+++ +      Q   +P       
Sbjct: 154 TLPKEIRQLRNLQELDLNSNK-LTTLPKEIGQLQNLKTLNLIVT---QLTTLP------- 202

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL--EIIDCPNFE----------RLPDE 302
                       K+    ++L +   +   LT+L  EI +  N E           LP E
Sbjct: 203 ------------KEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI--- 359
           +G LQ L  L +    +  LP+ +GQL  L +L+L + ++L  +   I +L++++ +   
Sbjct: 251 IGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDL-HQNQLTTLPKEIGQLQNLQELCLD 309

Query: 360 ---------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLP 403
                    EI    NL+        ++D + +  +P  VL+L          ++L +LP
Sbjct: 310 ENQLTTLPKEIEQLQNLR------VLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLP 363

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
             +   ++L  L +I   +L  LP E+G L+ L+EL ++   +   PK + QL
Sbjct: 364 KEIGQLQNLQVLGLI-SNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 415



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 37/317 (11%)

Query: 46  LRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
           L+  + HQ  L TL   I   +NL  L +  +K+T L  +++ L +L+ +DL  +KL T 
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTL 178

Query: 104 LPDLSLAQNLEILDL--GYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYL 160
             ++   QNL+ L+L     ++L +    +Q L  L +LD      LT+LP  I   + L
Sbjct: 179 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD----NQLTTLPKEIGELQNL 234

Query: 161 KRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLEN 219
           + LVLR  + +  LPK +        L L    +  LP  I  L N+  L ++   +L  
Sbjct: 235 EILVLRE-NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQ-NQLTT 292

Query: 220 ISSSIFKLQFLESI------------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLK 267
           +   I +LQ L+ +             I +  NL+ L++     D  +    P   L+L+
Sbjct: 293 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDL-----DNNQLTTLPKEVLRLQ 347

Query: 268 KCP-------RPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIR 320
                     R  +LP      ++L  L +I       LP E+G LQ L  L +D   + 
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN-QLTTLPKEIGQLQNLQELCLDENQLT 406

Query: 321 ELPEGLGQLALLSKLEL 337
             P+ + QL  L +L L
Sbjct: 407 TFPKEIRQLKNLQELHL 423



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 12/114 (10%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L LS N+L  +P+ + QL +L  L LS N+L  +
Sbjct: 50  VRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLR 607
           P+ +  L +L+ LDL +N L  +P  +                T++P E   LR
Sbjct: 110 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLR 163


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 249/569 (43%), Gaps = 106/569 (18%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  D+  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTALPKDIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +      QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQDN---QFTTLP- 202

Query: 249 CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL--EIIDCPNFERL------- 299
                             K+  + ++L +       L +L  EI    N + L       
Sbjct: 203 ------------------KEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRL 244

Query: 300 ---PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
              P E+G LQ L  L      +  LP+ +GQL  L  L L N + L      I +L+++
Sbjct: 245 IVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVN-NRLTVFPKEIGQLQNL 303

Query: 357 ESIE-ISNCSNLKGFPEI----PFCNID-----GSGIERI-------PSSVLKLNKCSK- 398
           + +E + N  +LK    I    P  N+D      +G+ R        P  V +L+   K 
Sbjct: 304 QDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKD 363

Query: 399 -LESLPSSLCMFKSLTSLEIIDC------KKLERL----------------PDELGNLEA 435
             +S P  +  F++L  L + DC      K++ RL                P E+G L+ 
Sbjct: 364 FSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           LE L +E   +  +PK + QL  L KL L + ++ +  P+ +   K L  L+ +    F 
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQ-NTLKIFPAEIEQLKKLQKLD-LSVNQFT 481

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
             P EIG LE L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           L L NN L  +P  +  L +L++L L  N
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 206/485 (42%), Gaps = 81/485 (16%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  L +  +++T L  ++  L +L+ +DL+ ++  T   ++   QNL+ L+L  
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNL-Q 217

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTS 179
            + L      I  L  L+ L L R   L   P  I      +++    + L  LPK M  
Sbjct: 218 DNQLATLPVEIGQLQNLQELYL-RNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC- 238
                TL L+   +   P  I  L N           L+++   +  L   E  RI +  
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEIGQLQN-----------LQDLELLMNPLSLKERKRIQKLF 325

Query: 239 --PNLQFLEMPSCNI--DGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
              NL   E+    +  +   ++E+P    EL L+     +S P     F++L  L + D
Sbjct: 326 PDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYD 385

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C  F  LP E+  L+ L  L +    ++ +P  +GQL  L  L L+  +ELE +   I +
Sbjct: 386 C-GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLE-ANELERLPKEIGQ 443

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L++++ + +   + LK FP         + IE++           KL+ L  S+  F + 
Sbjct: 444 LRNLQKLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLSVNQFTT- 482

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESL 472
                         P E+G LE L+ L ++   +  +P  + QL                
Sbjct: 483 -------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL---------------- 513

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
                  K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQL +L+WL
Sbjct: 514 -------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 533 VLSDN 537
            L +N
Sbjct: 566 YLQNN 570


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 161/317 (50%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 176/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++ + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +  +L++  +   
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLTTLPENIGQLQRL-QTLY 331

Query: 275 LPSGQCMF-----KSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
           L + Q  F     + L +LE +D  +     LP E+G LQ L  L +    +  LPE + 
Sbjct: 332 LGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|379731535|ref|YP_005323731.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378577146|gb|AFC26147.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 526

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 154/283 (54%), Gaps = 12/283 (4%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP     +K+L  L + +  N E LP  +G  QAL +LII   A+  LPE +GQL  L 
Sbjct: 242 SLPPTIGTWKNLRELRLSEN-NLETLPKAIGQCQALEQLIIQDNALATLPESMGQLKQLK 300

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L L+  ++LE + + + + +++  + + + + L+  PE    N+    +  +      L
Sbjct: 301 TLALQG-NQLERLPAGLMQAEALRILRLGD-NQLRQLPE-EIGNLKQLKVLNLGED--PL 355

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
           ++ ++L SLP+SL   + L  L I++  +L  LP  LGN +++ ++ +    +R +P S 
Sbjct: 356 SEGNQLVSLPNSLGQLQQLEEL-IVNNNRLSSLPKSLGNCQSIRKIELINNQLRTLPSSF 414

Query: 454 AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            QL   ++ L + +  ++LP  L   +SL  L++ +      LP++IG L+ LK L I G
Sbjct: 415 GQLEKLEVLLLRGNRLQALPDSLSGLRSLEWLDLSNNNRLRALPEDIGRLDQLKNLDISG 474

Query: 514 TAIREVPESLGQLSSLEWLV-----LSDNNLQIIPESLNQLSS 551
           T I+ +P+S+  L SLE+LV     +S+  L+ I +SL  L++
Sbjct: 475 TGIKHLPKSIENLYSLEFLVIHKGQISEEELRRIHKSLPSLTT 517



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 31/295 (10%)

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI------EISNCSNLKGF 370
           +AIR+LP+       L  L L  CS L +    +++LKS++ +      EI+   ++   
Sbjct: 155 SAIRKLPK-------LENLILSGCSTLPW---PLYQLKSLKKLSIELNTEITLSRSINQL 204

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKL 423
            ++   +   S +ER+  ++    +  +L        SLP ++  +K+L  L + +   L
Sbjct: 205 SQLEELSWTYSSLERLDGNMAIFKRLKRLNLERNSLNSLPPTIGTWKNLRELRLSE-NNL 263

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
           E LP  +G  +ALE+L ++   +  +P+S+ QL   K    + +  E LP+ L  +++L 
Sbjct: 264 ETLPKAIGQCQALEQLIIQDNALATLPESMGQLKQLKTLALQGNQLERLPAGLMQAEALR 323

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTI------KGTAIREVPESLGQLSSLEWLVLSDN 537
            L + D +   +LP+EIGNL+ LKVL +      +G  +  +P SLGQL  LE L++++N
Sbjct: 324 ILRLGDNQ-LRQLPEEIGNLKQLKVLNLGEDPLSEGNQLVSLPNSLGQLQQLEELIVNNN 382

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            L  +P+SL    S+  ++L NN L  +P     L  L+ L L  N L  +P+ L
Sbjct: 383 RLSSLPKSLGNCQSIRKIELINNQLRTLPSSFGQLEKLEVLLLRGNRLQALPDSL 437



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 48/341 (14%)

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           R    +  L  L  LI+ G +   LP  L QL  L KL ++  +E+  +S SI +L  +E
Sbjct: 152 RFSSAIRKLPKLENLILSGCST--LPWPLYQLKSLKKLSIELNTEI-TLSRSINQLSQLE 208

Query: 358 SIEISNCS------NLKGFPEIPFCNIDGSGIERIPSSV--------LKLN--------- 394
            +  +  S      N+  F  +   N++ + +  +P ++        L+L+         
Sbjct: 209 ELSWTYSSLERLDGNMAIFKRLKRLNLERNSLNSLPPTIGTWKNLRELRLSENNLETLPK 268

Query: 395 ---KCSKLE----------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
              +C  LE          +LP S+   K L +L  +   +LERLP  L   EAL  LR+
Sbjct: 269 AIGQCQALEQLIIQDNALATLPESMGQLKQLKTL-ALQGNQLERLPAGLMQAEALRILRL 327

Query: 442 EGTGIREVP------KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
               +R++P      K L  L L +  L + +   SLP+ L   + L  L I++      
Sbjct: 328 GDNQLRQLPEEIGNLKQLKVLNLGEDPLSEGNQLVSLPNSLGQLQQLEEL-IVNNNRLSS 386

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP  +GN + ++ + +    +R +P S GQL  LE L+L  N LQ +P+SL+ L SL  L
Sbjct: 387 LPKSLGNCQSIRKIELINNQLRTLPSSFGQLEKLEVLLLRGNRLQALPDSLSGLRSLEWL 446

Query: 556 KLSNNN-LERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            LSNNN L  +PE +  L  LK LD+    +  +P+ + + 
Sbjct: 447 DLSNNNRLRALPEDIGRLDQLKNLDISGTGIKHLPKSIENL 487



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 10/221 (4%)

Query: 385 RIPSSVLKLNKCSKL-----ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
           R  S++ KL K   L      +LP  L   KSL  L I +      L   +  L  LEEL
Sbjct: 152 RFSSAIRKLPKLENLILSGCSTLPWPLYQLKSLKKLSI-ELNTEITLSRSINQLSQLEEL 210

Query: 440 RVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
               + +  +  ++A    L +L L++ +S  SLP  +   K+L  L + +  N   LP 
Sbjct: 211 SWTYSSLERLDGNMAIFKRLKRLNLER-NSLNSLPPTIGTWKNLRELRLSE-NNLETLPK 268

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
            IG  + L+ L I+  A+  +PES+GQL  L+ L L  N L+ +P  L Q  +L  L+L 
Sbjct: 269 AIGQCQALEQLIIQDNALATLPESMGQLKQLKTLALQGNQLERLPAGLMQAEALRILRLG 328

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
           +N L ++PE +  L  LK L+L E+ L      L S P S+
Sbjct: 329 DNQLRQLPEEIGNLKQLKVLNLGEDPLSE-GNQLVSLPNSL 368


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 172/367 (46%), Gaps = 41/367 (11%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP     +K    L +  C +F  LP E+ +L+ LN L +    I  +P  L +L  L+
Sbjct: 38  SLPPSIAEYKDCERLNL-RCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTALT 96

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L +     +  +   I KL +++ +++S                  + IE IP ++L L
Sbjct: 97  VLNMNGNEIIGKLQPDISKLVNLQKLDLS-----------------VNNIEEIPRTILNL 139

Query: 394 NKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
               +L+       ++P  +     LT L +    +L  LP  LGNL+ L+ LRV    +
Sbjct: 140 CALQELDLHYNMLSTIPCEVGQLVHLTDLNL-SQNQLTELPITLGNLKRLQSLRVSDNKL 198

Query: 447 REVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
             V   +  L  L  L L K    E +PS +   KSL  L I D      LP +IG L+ 
Sbjct: 199 LSVSMEIGMLVELRTLDLSKNEIVE-IPSSIGKLKSLKMLHI-DRNKLTNLPIDIGKLKN 256

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L+ + +    I + PES+G L +L++L   +N L+ +P S   LS L  + +SNN +E +
Sbjct: 257 LQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESL 316

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYL-------RSFPT--SIPSEFTSLRLSVDLRNCL 616
           P  +  L  LKYLD+  N+L+ +P  +       +   T   +  E TSL++   +RN +
Sbjct: 317 PRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKM---MRNQI 373

Query: 617 KLDPNEL 623
           K+ P E+
Sbjct: 374 KVLPREI 380



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 162/700 (23%), Positives = 276/700 (39%), Gaps = 178/700 (25%)

Query: 12  PYTFSKMTELRLLKFCGS-----------------KNKCMVHSLEGVPFT---------- 44
           P +  K+T L +L   G+                 K    V+++E +P T          
Sbjct: 86  PMSLYKLTALTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQEL 145

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +L Y      P +   ++H   L  L +  +++T+L   + NL  L+ + +  +KLL+  
Sbjct: 146 DLHYNMLSTIPCEVGQLVH---LTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVS 202

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLV 164
            ++ +   L  LDL   + + E  SSI  L  L++L +DR K LT+LP  I         
Sbjct: 203 MEIGMLVELRTLDLSK-NEIVEIPSSIGKLKSLKMLHIDRNK-LTNLPIDI--------- 251

Query: 165 LRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
                 LKNL ++     +         I + P SI  L N                   
Sbjct: 252 ----GKLKNLQEINMSMNK---------ILDFPESIGGLVN------------------- 279

Query: 225 FKLQFLESIRIH-RCPNLQFLEMPS---CNIDGTRSKEQPSSELKLKKCP-------RPE 273
             LQFL +     +C  + F+ +      N+     +  P S  KLK            E
Sbjct: 280 --LQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLE 337

Query: 274 SLPS--GQC------------MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAI 319
           SLP   G+C            M + LTSL+++     + LP E+G L +L+ L+ID   I
Sbjct: 338 SLPPSIGECILVSKHVITCWKMLRELTSLKMMRN-QIKVLPREIGYLSSLSTLVIDDNPI 396

Query: 320 RE--------------------------------------------LPEGLGQLALLSKL 335
           RE                                            +P+ + Q   + +L
Sbjct: 397 REPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQNDLTYIPKSISQYTHIQQL 456

Query: 336 ELKNCSELEYISSSIFKLKSVESIEISNCS--NLKG-FPEIPFCNIDGSGIERIPSSVLK 392
           +L   ++L Y+   + +L  +E+++ISN +  +L G F ++   N+  + +   P ++  
Sbjct: 457 DLSR-NKLSYLPLEMCQLTQLENLDISNNNLIDLPGSFSDLKILNLSRNNLTEFPDNLEN 515

Query: 393 LNKC--------------------------SKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
           + +                           +KL++ P  LC    L  L +  C  +E +
Sbjct: 516 IQQIDISQNCLQNIHIGMNLSKLTHVNMRDTKLKNFPLQLCSASELYHLNL-SCNNIEEI 574

Query: 427 PDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
           P  + NL+ L  + V    IR +PK +  +   K      +   ++P  L   + LT L+
Sbjct: 575 PPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLLD 634

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
           I +  N   LP + G L  L++L + G    E P ++ +L+ L  L LS NN+  IP ++
Sbjct: 635 IRN-NNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTSIPSTI 693

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
            +L SL  + +  N +  +P  L  L  +K L L EN  D
Sbjct: 694 GRLKSLEEMSIDGNIITELPAELLELQIIK-LQLIENQQD 732



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 250/583 (42%), Gaps = 110/583 (18%)

Query: 88  VSLKRIDLKYS----KLLTKLPDLSLAQN------LEILDLGYCSSLTETHSSIQYL--- 134
           VSLK+ DL Y        T +  L L++N      LE+  L    +L  +++++  L   
Sbjct: 433 VSLKQNDLTYIPKSISQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLPGS 492

Query: 135 -NKLEVLDLDRCKSLTSLPTS---IHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG 190
            + L++L+L R  +LT  P +   I    + +  L+      NL K+T  ++R T     
Sbjct: 493 FSDLKILNLSR-NNLTEFPDNLENIQQIDISQNCLQNIHIGMNLSKLTHVNMRDT----- 546

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
             ++  P  +   S +  L + SC  +E I   I  LQ L  I +  C N +   +P   
Sbjct: 547 -KLKNFPLQLCSASELYHLNL-SCNNIEEIPPGICNLQRLAIIDV--CEN-KIRSIPKEI 601

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
            +  R KE   S  K+   P P       C  + LT L+I +  N + LP + G L  L 
Sbjct: 602 GNMNRLKELHISNNKIGNIPEP------LCKLRELTLLDIRNN-NLKELPPQFGELHELQ 654

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES------------ 358
            L + G    E P  + +L  L KL L   + +  I S+I +LKS+E             
Sbjct: 655 ILQLSGNVFNEFPPAISKLTKLVKLYLSG-NNMTSIPSTIGRLKSLEEMSIDGNIITELP 713

Query: 359 -------------IEISNCSNLKGF-PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
                        IE    + LK F  E+     +GS +   P  +   N+ SKL    +
Sbjct: 714 AELLELQIIKLQLIENQQDTPLKDFVAELSRLKQNGSTVAISPRII---NRNSKL----N 766

Query: 405 SLCMFKSLTSLEIID-CKK--------LERLPDELGNLEALEELRVEGTGI-------RE 448
           S+C+    T +   D CK         ++++ DEL ++E L  L  + + I       ++
Sbjct: 767 SICVTGIKTGVSSTDVCKNVCMKGQNAIKKMWDEL-DIETLRRLEEDTSDIDFANRDLQK 825

Query: 449 VPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLK 507
           +P  + + A L KL LK  +  ++LP  +    SL SL + D  +F   P  + +LE L 
Sbjct: 826 LPGVIGRFAELKKLNLK-SNHLDTLPEEVSNLTSLESLNLAD-NSFENYPSVLSHLENLV 883

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS------------- 554
            L +    +  +  SL  +  L+    S NNL  IP +++Q S L +             
Sbjct: 884 TLNLNHNKLTAMHISLVNIKELDA---SHNNLVAIPNTVSQASQLTNKINDDPSITLDLK 940

Query: 555 ----LKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
               L+L++N L  IP  +D L  L  LD+ +N L +IP+ +R
Sbjct: 941 SLKVLRLTHNKLTSIPS-VDSLLELTVLDISDNKLQKIPKQIR 982



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 156/369 (42%), Gaps = 74/369 (20%)

Query: 295  NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLAL--LSKLELKNCSELEYISSSIFK 352
            N   +P  +G L++L  + IDG  I ELP  L +L +  L  +E +  + L+   + + +
Sbjct: 685  NMTSIPSTIGRLKSLEEMSIDGNIITELPAELLELQIIKLQLIENQQDTPLKDFVAELSR 744

Query: 353  LK-----------------------------SVESIEISNCSN--LKGFPEIP--FCNID 379
            LK                              V S ++  C N  +KG   I   +  +D
Sbjct: 745  LKQNGSTVAISPRIINRNSKLNSICVTGIKTGVSSTDV--CKNVCMKGQNAIKKMWDELD 802

Query: 380  GSGIERIPSSVLKLNKCSK-LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
               + R+      ++  ++ L+ LP  +  F  L  L +     L+ LP+E+ NL +LE 
Sbjct: 803  IETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNL-KSNHLDTLPEEVSNLTSLES 861

Query: 439  LRVEGTGIREVPKSLAQLA----------------LSKLKLKKCSS----FESLPSRLYV 478
            L +        P  L+ L                 +S + +K+  +      ++P+ +  
Sbjct: 862  LNLADNSFENYPSVLSHLENLVTLNLNHNKLTAMHISLVNIKELDASHNNLVAIPNTVSQ 921

Query: 479  SKSLT--------------SLEIID-CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            +  LT              SL+++    N +     + +L  L VL I    ++++P+ +
Sbjct: 922  ASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIPSVDSLLELTVLDISDNKLQKIPKQI 981

Query: 524  GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
              L +L+ L LS+N ++ +P  +  L+ L  L +SNN LE +P  +D +++L+ L +  N
Sbjct: 982  RILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNELEHLPPEIDNMTNLQSLYIQRN 1041

Query: 584  NLDRIPEYL 592
             L  +P  +
Sbjct: 1042 RLMELPRTI 1050



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 44/275 (16%)

Query: 273  ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
            + LP     F  L  L +    + + LP+E+ NL +L  L +   +    P  L  L  L
Sbjct: 824  QKLPGVIGRFAELKKLNL-KSNHLDTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENL 882

Query: 333  SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-IPFCNIDGSGIERIPSSVL 391
              L L N ++L  +  S+  +K +++    + +NL   P  +   +   + I   PS  L
Sbjct: 883  VTLNL-NHNKLTAMHISLVNIKELDA----SHNNLVAIPNTVSQASQLTNKINDDPSITL 937

Query: 392  KLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
             L          +KL S+PS   + + LT L+I D  KL+++P ++  L+ L+EL +   
Sbjct: 938  DLKSLKVLRLTHNKLTSIPSVDSLLE-LTVLDISD-NKLQKIPKQIRILKNLKELYLSNN 995

Query: 445  GIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGN 502
             I+ VP  +  L                          T L  +D  N     LP EI N
Sbjct: 996  EIKTVPCEITHL--------------------------TELHELDISNNELEHLPPEIDN 1029

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
            +  L+ L I+   + E+P ++  + +L+++  S N
Sbjct: 1030 MTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGN 1064



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 14/173 (8%)

Query: 465 KCSSFESLPSRLYVSKSLTSLEII-DCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPES 522
           +C+SF +LP  +   K L  L +  +C     +P  +  L  L VL + G   I ++   
Sbjct: 55  RCNSFSTLPPEISHLKKLNELNLSENC--IENIPMSLYKLTALTVLNMNGNEIIGKLQPD 112

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           + +L +L+ L LS NN++ IP ++  L +L  L L  N L  IP  +  L  L  L+L +
Sbjct: 113 ISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQ 172

Query: 583 NNLDRIP---------EYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           N L  +P         + LR     + S    + + V+LR  L L  NE+ EI
Sbjct: 173 NQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELR-TLDLSKNEIVEI 224


>gi|297836991|ref|XP_002886377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332218|gb|EFH62636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 934

 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 17/262 (6%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF----CGSKNKCMVHSLEGVPFTELRYFEWHQFPL 56
           +S I   + I+   F KM  LR L      C   ++  V    G P   LR   W  +P 
Sbjct: 507 ISTIQDGVYISARAFKKMCNLRFLNIYKTRCDGNDRVHVPEDMGFP-PRLRLLRWDVYPG 565

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           K L      E LV LK+  +K+ +LW+  Q L +LK++DL  S+ L +LPDLS A NLE 
Sbjct: 566 KCLPRTFSPEYLVELKLQHNKLEKLWEGTQRLTNLKKMDLTESRKLKELPDLSNATNLEQ 625

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L L  C SL    SSI  L+KLE L +  C++L  +P+  +   L+R+ + GC  L+ L 
Sbjct: 626 LTLVSCKSLVRLPSSIGNLHKLEWLLVGLCRNLQIVPSHFNLASLERVEMYGCWKLRKLV 685

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI--------YSCKRLENISSSIFKL 227
            +++    +TL +    +EE P SI+  S +  L I         S   ++ I   I  L
Sbjct: 686 DISTN--ITTLFITETMLEEFPESIRLWSRLQTLRIQGSLEGSHQSGAGIKKIPDCIKYL 743

Query: 228 QFLESIRIHRCPNLQFL-EMPS 248
             L+ + I  CP L  L E+PS
Sbjct: 744 HGLKELYIVGCPKLVSLPELPS 765



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 126/311 (40%), Gaps = 74/311 (23%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L +  KL+ LP  L    +L  L ++ CK L RLP  +GNL  LE L V   G+    
Sbjct: 603 MDLTESRKLKELPD-LSNATNLEQLTLVSCKSLVRLPSSIGNLHKLEWLLV---GL---- 654

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          C + + +PS   ++ SL  +E+  C    +L D   N   +  L 
Sbjct: 655 ---------------CRNLQIVPSHFNLA-SLERVEMYGCWKLRKLVDISTN---ITTLF 695

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           I  T + E PES+   S L+ L +                SL     S   +++IP+ + 
Sbjct: 696 ITETMLEEFPESIRLWSRLQTLRIQ--------------GSLEGSHQSGAGIKKIPDCIK 741

Query: 571 PLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNEL------ 623
            L  LK L +     L  +PE        +PS  T L+ S    NC  L+   L      
Sbjct: 742 YLHGLKELYIVGCPKLVSLPE--------LPSSLTILQAS----NCESLETVSLPFDSLF 789

Query: 624 -----SEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNK 678
                 E  K G   ++V  +  +   +  PG+ IP  F H++ G+++++++        
Sbjct: 790 EYLHFPECFKLGQEARTVITQQSLLACL--PGSIIPAEFDHRAIGNSLTIRS-------N 840

Query: 679 LMGFAFCVVVA 689
              F  CVVV+
Sbjct: 841 FKEFRMCVVVS 851



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 41/274 (14%)

Query: 240 NLQFLEMPSCNIDGTRSKEQPSS-----ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           NL+FL +     DG      P        L+L    R +  P G+C+ ++ +   +++  
Sbjct: 526 NLRFLNIYKTRCDGNDRVHVPEDMGFPPRLRL---LRWDVYP-GKCLPRTFSPEYLVELK 581

Query: 295 ----NFERLPDELGNLQALNRL-IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
                 E+L +    L  L ++ + +   ++ELP+ L     L +L L +C  L  + SS
Sbjct: 582 LQHNKLEKLWEGTQRLTNLKKMDLTESRKLKELPD-LSNATNLEQLTLVSCKSLVRLPSS 640

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMF 409
           I  L  +E + +  C NL+  P     + + + +ER+     ++  C KL  L     + 
Sbjct: 641 IGNLHKLEWLLVGLCRNLQIVPS----HFNLASLERV-----EMYGCWKLRKLVD---IS 688

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT---------GIREVPKSLAQL-ALS 459
            ++T+L I +   LE  P+ +     L+ LR++G+         GI+++P  +  L  L 
Sbjct: 689 TNITTLFITET-MLEEFPESIRLWSRLQTLRIQGSLEGSHQSGAGIKKIPDCIKYLHGLK 747

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNF 493
           +L +  C    SLP    +  SLT L+  +C++ 
Sbjct: 748 ELYIVGCPKLVSLPE---LPSSLTILQASNCESL 778


>gi|108740447|gb|ABG01579.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 189/406 (46%), Gaps = 57/406 (14%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           VQ L +L+++DL YS  L +LPDLS A  L  L L  CSSL +  S I     LE LDL+
Sbjct: 7   VQPLQNLRQMDLSYSVNLKELPDLSTAIYLRKLFLSGCSSLIKLPSCIGNATNLEDLDLN 66

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM-TSCHLRSTLPLLGVGIEELPSSIKC 202
            C SL  LP+   +  L++ +LR CSNL  LP +  + +LR         +  LPSSI  
Sbjct: 67  GCSSLAELPSFGDAINLQKXLLRHCSNLVELPSIGNAINLREXDLYYCSSLIRLPSSIGN 126

Query: 203 LSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS 262
             N+  L +  C  L  + SSI     L+ + + RC  L  LE+PS +I    + +    
Sbjct: 127 AINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKL--LELPS-SIGNAINLQNLLL 183

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +        P S+ +      +L  + + +C N   LP  +GNLQ L  LI         
Sbjct: 184 DDCSSLLKLPSSIGNA----TNLVYMNLSNCSNLVELPLSIGNLQKLQELI--------- 230

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP-------F 375
                         LK CS+LE +  +I  L+S++ + +++CS LK FPEI         
Sbjct: 231 --------------LKGCSKLEDLPINI-NLESLDRLVLNDCSMLKRFPEISTXVRALYL 275

Query: 376 CNIDGSGIERIPSSVLKLNKCSKL-----ESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           C   G+ IE +P S+    +  +L     ++L     +   +T+L++ D K L+ +P  +
Sbjct: 276 C---GTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHVLDIITNLDLSD-KDLQEVPPLI 331

Query: 431 GNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKCSSFESL 472
             +  L+ L ++G      + ++P SL       +  + C S E L
Sbjct: 332 KRISRLQTLILKGYRKVVSLPQIPDSLKW-----IDAEDCESLERL 372



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 162/368 (44%), Gaps = 61/368 (16%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           NL  L + G           + ++L++  L++   L +LP +  A NL   DL YCSSL 
Sbjct: 59  NLEDLDLNGCSSLAELPSFGDAINLQKXLLRHCSNLVELPSIGNAINLREXDLYYCSSLI 118

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKM--TSCHL 182
              SSI     L +LDL+ C +L  LP+SI +   L++L LR C+ L  LP     + +L
Sbjct: 119 RLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINL 178

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
           ++ L      + +LPSSI   +N+  + + +C  L  +  SI  LQ L+           
Sbjct: 179 QNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQ----------- 227

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
                               EL LK C + E LP      +SL  L + DC   +R P+ 
Sbjct: 228 --------------------ELILKGCSKLEDLPIN-INLESLDRLVLNDCSMLKRFPEI 266

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL---KNCSELEYISSSIFKLKSVESI 359
              ++A   L + GTAI E+P  +     L +L +    N  E  ++      L  + ++
Sbjct: 267 STXVRA---LYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLIEFPHV------LDIITNL 317

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           ++S+    K   E+P        I+RI     L L    K+ SLP    +  SL  ++  
Sbjct: 318 DLSD----KDLQEVP------PLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKWIDAE 364

Query: 419 DCKKLERL 426
           DC+ LERL
Sbjct: 365 DCESLERL 372



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 187/430 (43%), Gaps = 76/430 (17%)

Query: 128 HSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLP 187
           + S+Q L  L  +DL    +L  LP    + YL++L L GCS+L                
Sbjct: 4   YLSVQPLQNLRQMDLSYSVNLKELPDLSTAIYLRKLFLSGCSSLI--------------- 48

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
                  +LPS I   +N+ +L +  C  L  + S    +  L+   +  C NL  +E+P
Sbjct: 49  -------KLPSCIGNATNLEDLDLNGCSSLAELPSFGDAIN-LQKXLLRHCSNL--VELP 98

Query: 248 SC-NIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
           S  N    R       E  L  C     LPS      +L  L++  C N   LP  +GN 
Sbjct: 99  SIGNAINLR-------EXDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNA 151

Query: 307 QALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
             L +L +   A + ELP  +G    L  L L +CS L  + SSI    ++  + +SNCS
Sbjct: 152 INLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCS 211

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL   P      +    ++++   +LK   CSKLE LP ++ + +SL  L + DC  L+R
Sbjct: 212 NLVELP------LSIGNLQKLQELILK--GCSKLEDLPININL-ESLDRLVLNDCSMLKR 262

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
            P+    + AL    + GT I EVP S+   +  +L     S F++L    +V   +T+L
Sbjct: 263 FPEISTXVRAL---YLCGTAIEEVPLSIR--SWPRLDELLMSYFDNLIEFPHVLDIITNL 317

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN----NLQI 541
           ++ D                          ++EVP  + ++S L+ L+L       +L  
Sbjct: 318 DLSD------------------------KDLQEVPPLIKRISRLQTLILKGYRKVVSLPQ 353

Query: 542 IPESLNQLSS 551
           IP+SL  + +
Sbjct: 354 IPDSLKWIDA 363



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 12/235 (5%)

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           S+  L+++  +++S   NLK  P++            I    L L+ CS L  LPS +  
Sbjct: 6   SVQPLQNLRQMDLSYSVNLKELPDLS---------TAIYLRKLFLSGCSSLIKLPSCIGN 56

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
             +L  L++  C  L  LP     +   + L    + + E+P     + L +  L  CSS
Sbjct: 57  ATNLEDLDLNGCSSLAELPSFGDAINLQKXLLRHCSNLVELPSIGNAINLREXDLYYCSS 116

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLS 527
              LPS +  + +L  L++  C N + LP  IGN   L+ L ++  A + E+P S+G   
Sbjct: 117 LIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAI 176

Query: 528 SLEWLVLSDNNLQI-IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDL 580
           +L+ L+L D +  + +P S+   ++LV + LSN +NL  +P  +  L  L+ L L
Sbjct: 177 NLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELIL 231


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 51/338 (15%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L+ L RL ++   +  LP+ +GQL        +N  EL+   +S+  L     
Sbjct: 63  LPKEIGQLENLQRLNLNSQKLTTLPKEIGQL--------RNLQELDLSFNSLTTLPK--- 111

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
            E+    NL+                      L L++ ++L +LP  +   K+L  L++ 
Sbjct: 112 -EVGQLENLQR---------------------LDLHQ-NRLATLPMEIGQLKNLQELDL- 147

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           +  KL  LP E+  L  L+EL +    +  +PK + QL   K      +   +LP  +  
Sbjct: 148 NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGE 207

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
            ++L +L ++D +    LP EIG L+ L++L ++   I  +P+ +GQL +L+WL L  N 
Sbjct: 208 LQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
           L  +P+ + QL +L  L L  N L  +P+ +  L +L+ L L EN L           T+
Sbjct: 267 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQL-----------TT 315

Query: 599 IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
           +P E   L+   +LR  L LD N+L+ + K+    QS+
Sbjct: 316 LPKEIEQLQ---NLR-VLDLDNNQLTTLPKEVLRLQSL 349



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 162/336 (48%), Gaps = 46/336 (13%)

Query: 282 FKSLTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPEGLGQL 329
           F SLT+L  E+    N +RL          P E+G L+ L  L ++   +  LP+ + QL
Sbjct: 103 FNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQL 162

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCN 377
             L +L+L + ++L  +   I +L++++++            EI    NLK        N
Sbjct: 163 RNLQELDL-HRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTL------N 215

Query: 378 IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           +  + +  +P  + +L          +++ +LP  +   ++L  L++    +L  LP E+
Sbjct: 216 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL-HQNQLTTLPKEI 274

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           G L+ L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L ++D
Sbjct: 275 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRVLD 330

Query: 490 CKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
             N     LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ + 
Sbjct: 331 LDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIG 390

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           QL +L  L L  N L   P+ +  L +L+ L L+ N
Sbjct: 391 QLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 12/247 (4%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
           +KL  LP E+G LE L+ L +    +  +PK + QL  L +L L   +S  +LP  +   
Sbjct: 58  QKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQL 116

Query: 480 KSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNL 539
           ++L  L++   +    LP EIG L+ L+ L +    +  +P+ + QL +L+ L L  N L
Sbjct: 117 ENLQRLDLHQNR-LATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQL 175

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSI 599
             +P+ + QL +L +L      L  +P+ +  L +LK L+L +N L  +P+ +       
Sbjct: 176 TTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI------- 228

Query: 600 PSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH 659
             E  +L + V   N +   P E+ ++    W+    N  T + K +    N + +   H
Sbjct: 229 -GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQN-LQRLDLH 286

Query: 660 QSTGSTI 666
           Q+  +T+
Sbjct: 287 QNQLTTL 293



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 177/421 (42%), Gaps = 68/421 (16%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +LRY +    P +   I   ENL  L +   K+T L  ++  L +L+ +DL ++ L T  
Sbjct: 54  DLRYQKLTILPKE---IGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLP 110

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRL 163
            ++   +NL+ LDL + + L      I  L  L+ LDL+  K LT+LP  I   + L+ L
Sbjct: 111 KEVGQLENLQRLDL-HQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIRQLRNLQEL 168

Query: 164 VLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
            L   + L  LPK +       TL  +   +  LP  I  L N+  L +    +L  +  
Sbjct: 169 DLHR-NQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLD-NQLTTLPK 226

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            I +LQ LE + +                                   R  +LP      
Sbjct: 227 EIGELQNLEILVLREN--------------------------------RITALPKEIGQL 254

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           ++L  L+ +       LP E+G LQ L RL +    +  LP+ +GQ        L+N  E
Sbjct: 255 QNLQWLD-LHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ--------LQNLQE 305

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC------ 396
           L    + +  L      EI    NL+        ++D + +  +P  VL+L         
Sbjct: 306 LCLDENQLTTLPK----EIEQLQNLR------VLDLDNNQLTTLPKEVLRLQSLQVLALG 355

Query: 397 -SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            ++L +LP  +   ++L  L +I   +L  LP E+G L+ L+EL ++   +   PK + Q
Sbjct: 356 SNRLSTLPKEIGQLQNLQVLGLI-SNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQ 414

Query: 456 L 456
           L
Sbjct: 415 L 415



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 15/136 (11%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L L+   L  +P+ + QL +L  L LS N+L  +
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLR--LSVD 611
           P+ +  L +L+ LDL +N L  +P  +                T++P E   LR    +D
Sbjct: 110 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELD 169

Query: 612 L-RNCLKLDPNELSEI 626
           L RN L   P E+ ++
Sbjct: 170 LHRNQLTTLPKEIGQL 185


>gi|449447729|ref|XP_004141620.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 838

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 170/354 (48%), Gaps = 29/354 (8%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKM 72
            F+ M+ELR+L+     N  +   +E +   +L    W  +P K L +     +L+ L +
Sbjct: 326 AFADMSELRILRI---NNVQLSEDIECLS-NKLTLLNWPGYPSKYLPSTFQPPSLLELHL 381

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
           PGS V +LW+  QN  +LK ID   SK L + P+ S A  L  L L  C  L + HSSI 
Sbjct: 382 PGSNVERLWNGTQNFKNLKEIDASDSKFLVETPNFSEAPKLRRLILRNCGRLNKVHSSIN 441

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR--STLPLLG 190
            L++L +LD++ C S  S    +  K LK LVL  C  L+  P+   C +   + L + G
Sbjct: 442 SLHRLILLDMEGCVSFRSFSFPVTCKSLKTLVLSNCG-LEFFPEF-GCVMGYLTELHIDG 499

Query: 191 VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC- 249
             I +L  SI  L  +  L + +C RL ++ + I +L  L+++ ++ C NL   ++P C 
Sbjct: 500 TSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLD--KIPPCL 557

Query: 250 ---------NIDGTRSKEQPSSE-LKLKKCPRPE-----SLPSGQCMF-KSLTSLEIIDC 293
                    +I GT     P  E L++  C R +     SL      + +SL  L + DC
Sbjct: 558 RYVKHLEELDIGGTSISTIPFLENLRILNCERLKSNIWHSLAGLAAQYLRSLNDLNLSDC 617

Query: 294 PNF-ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
               E +P++L    +L  L +       L E + QL  L  L L +C++L+ +
Sbjct: 618 NLVDEDIPNDLELFSSLEILDLSSNHFERLSESIKQLINLKVLYLNDCNKLKQV 671



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 74/378 (19%)

Query: 230 LESIRIHRCPNLQFLEMPSC--------NIDGTRSKEQPSS-------ELKLKKCPRPES 274
           +  +RI R  N+Q  E   C        N  G  SK  PS+       EL L      E 
Sbjct: 330 MSELRILRINNVQLSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGS-NVER 388

Query: 275 LPSGQCMFKSLTSLE------IIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLG 327
           L +G   FK+L  ++      +++ PNF   P        L RLI+     + ++   + 
Sbjct: 389 LWNGTQNFKNLKEIDASDSKFLVETPNFSEAP-------KLRRLILRNCGRLNKVHSSIN 441

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDG 380
            L  L  L+++ C      S  +   KS++++ +SNC  L+ FPE       +   +IDG
Sbjct: 442 SLHRLILLDMEGCVSFRSFSFPV-TCKSLKTLVLSNCG-LEFFPEFGCVMGYLTELHIDG 499

Query: 381 SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
           + I ++  S+        L L  C +L SLP+ +C   SL +L +  CK L+++P  L  
Sbjct: 500 TSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRY 559

Query: 433 LEALEELRVEGTGIREVP--KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           ++ LEEL + GT I  +P  ++L  L   +LK     S   L ++    +SL  L + DC
Sbjct: 560 VKHLEELDIGGTSISTIPFLENLRILNCERLKSNIWHSLAGLAAQYL--RSLNDLNLSDC 617

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                L DE                  ++P  L   SSLE L LS N+ + + ES+ QL 
Sbjct: 618 N----LVDE------------------DIPNDLELFSSLEILDLSSNHFERLSESIKQLI 655

Query: 551 SLVSLKLSN-NNLERIPE 567
           +L  L L++ N L+++P+
Sbjct: 656 NLKVLYLNDCNKLKQVPK 673


>gi|297838205|ref|XP_002886984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332825|gb|EFH63243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 166/327 (50%), Gaps = 45/327 (13%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVPF--TELRYFEWHQFPL 56
           S+++SE+ I+   F  M+ L+ L+F    G ++   ++  +G+ +   +L+  EW +FPL
Sbjct: 555 SELSSELNISERAFEGMSNLKFLRFYYRYGDRSD-KLYLPQGLNYLSRKLKILEWDRFPL 613

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             + +    E LV L M  SK+ +LWD    L +LK + L +SK+L +LPDLS A NL+ 
Sbjct: 614 TCMPSNFCTEYLVELNMRFSKLHKLWDGNMPLANLKWMYLNHSKILKELPDLSTATNLQE 673

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNL 174
           L L  CSSL E  SSI     L+ L L+ C SL  LP+SI + + L++L L GC+ L+ L
Sbjct: 674 LFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCTKLEVL 733

Query: 175 PK-----------MTSCHLRSTLP----------LLGVGIEELPSSIKCLSNIGEL-LIY 212
           P            +T C +    P          L+G  I+E+PSS K    + +L L Y
Sbjct: 734 PANINLESLEELDLTDCLVLKRFPEISTNIKVLKLIGTAIKEVPSSTKSWLRLCDLELSY 793

Query: 213 SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           +    +N+  S      + ++ I+   + +  E+P      +R +        L  C + 
Sbjct: 794 N----QNLKESQHAFDIITTMYIN---DKEMQEIPLWVKKISRLQ-----TFILSGCKKL 841

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERL 299
            SLP    +  SL+ L++++C + ERL
Sbjct: 842 VSLPQ---LSDSLSYLKVVNCESLERL 865



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 20/257 (7%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L ++ C +   LP  +G    L +L ++  T++ ELP  +G L  L KL L  C++
Sbjct: 670 NLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCTK 729

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID-----GSGIERIPSSVLKLNKCS 397
           LE + ++I  L+S+E +++++C  LK FPEI   NI      G+ I+ +PSS     +  
Sbjct: 730 LEVLPANI-NLESLEELDLTDCLVLKRFPEIS-TNIKVLKLIGTAIKEVPSSTKSWLRLC 787

Query: 398 KLE-----SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            LE     +L  S   F  +T++ I D K+++ +P  +  +  L+   + G    +   S
Sbjct: 788 DLELSYNQNLKESQHAFDIITTMYIND-KEMQEIPLWVKKISRLQTFILSGC---KKLVS 843

Query: 453 LAQL--ALSKLKLKKCSSFESLPSRLYVSK-SLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           L QL  +LS LK+  C S E L    +  K SL   +  + K   R        +   +L
Sbjct: 844 LPQLSDSLSYLKVVNCESLERLDCSFHNPKISLGFGKFHESKLNQRRLSTTSRFKVCILL 903

Query: 510 TIKGTAIREVPESLGQL 526
             KG    EV E  G++
Sbjct: 904 VNKGDKESEVKEVFGRI 920



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 34/189 (17%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L KCS L  LPSS+    +L  L +  C  L  LP  +GNL  L++L + G       
Sbjct: 674 LFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNG------- 726

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          C+  E LP+ + + +SL  L++ DC    R P+   N   +KVL 
Sbjct: 727 ---------------CTKLEVLPANINL-ESLEELDLTDCLVLKRFPEISTN---IKVLK 767

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNL---QIIPESLNQLSSLVSLKLSNNNLERIPE 567
           + GTAI+EVP      S+  WL L D  L   Q + ES +    + ++ +++  ++ IP 
Sbjct: 768 LIGTAIKEVPS-----STKSWLRLCDLELSYNQNLKESQHAFDIITTMYINDKEMQEIPL 822

Query: 568 RLDPLSSLK 576
            +  +S L+
Sbjct: 823 WVKKISRLQ 831



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 28/218 (12%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI-REVPKSLAQLA 457
           L  +PS+ C  + L  L +    KL +L D    L  L+ + +  + I +E+P       
Sbjct: 613 LTCMPSNFCT-EYLVELNM-RFSKLHKLWDGNMPLANLKWMYLNHSKILKELPDLSTATN 670

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L +L L KCSS   LPS +  + +L  L +  C + + LP  IGNL  L+ LT+ G    
Sbjct: 671 LQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCTKL 730

Query: 518 EVPESLGQLSSLEWLVLSD-----------NNLQI----------IPESLNQLSSLVSLK 556
           EV  +   L SLE L L+D            N+++          +P S      L  L+
Sbjct: 731 EVLPANINLESLEELDLTDCLVLKRFPEISTNIKVLKLIGTAIKEVPSSTKSWLRLCDLE 790

Query: 557 LS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
           LS N NL+      D ++++ Y++  +  +  IP +++
Sbjct: 791 LSYNQNLKESQHAFDIITTM-YIN--DKEMQEIPLWVK 825


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 148/280 (52%), Gaps = 19/280 (6%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ LP+ +GQL  L  LEL N ++L  +   I +L++++ + +S  + L  FP+      
Sbjct: 58  LKTLPKEIGQLQNLQVLELNN-NQLATLPKEIGQLQNLQELHLS-GNQLTTFPK------ 109

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           +   ++ + + VL  N+ +   +LP  +   K+L  L  ++  +L+ LP E+G L+ L++
Sbjct: 110 EIGQLKNLQTLVLSKNRLT---TLPKEIGQLKNLREL-YLNTNQLKTLPKEIGQLKNLQQ 165

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMR 495
           L +    ++ +PK + QL  L +L L    S+  L +       L +L+++D  +     
Sbjct: 166 LNLYANQLKTLPKEIGQLQNLRELHL----SYNQLKTLSAEIGQLQNLQVLDLNDNQLKT 221

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L++L +     + VPE +GQL +L+ L L  N  + +PE + QL +L  L
Sbjct: 222 LPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQML 281

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            L+NN  + +PE    L +L+ L L  N L  +P  +R  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 170/333 (51%), Gaps = 28/333 (8%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAI 319
           SE KLK  P+      GQ     L +L++++  N     LP E+G LQ L  L + G  +
Sbjct: 54  SEQKLKTLPKE----IGQ-----LQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQL 104

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
              P+ +GQL  L  L L + + L  +   I +LK++  + + N + LK  P+       
Sbjct: 105 TTFPKEIGQLKNLQTLVL-SKNRLTTLPKEIGQLKNLRELYL-NTNQLKTLPK------- 155

Query: 380 GSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
              I ++  ++ +LN   ++L++LP  +   ++L  L +    +L+ L  E+G L+ L+ 
Sbjct: 156 --EIGQL-KNLQQLNLYANQLKTLPKEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQV 211

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
           L +    ++ +PK + QL  L  L L   + F+++P  +   K+L  L++     F  +P
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNN-NQFKTVPEEIGQLKNLQVLDL-GYNQFKTVP 269

Query: 498 DEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
           +EIG L+ L++L +     + VPE  GQL +L+ L L+ N L  +P  + QL +L  L L
Sbjct: 270 EEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHL 329

Query: 558 SNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           S N L+ +   +  L +LK L L +N L  +P+
Sbjct: 330 SYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPK 362



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 157/316 (49%), Gaps = 20/316 (6%)

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           I +  NLQ LE+ +  +  T  KE    Q   EL L    +  + P      K+L +L +
Sbjct: 65  IGQLQNLQVLELNNNQL-ATLPKEIGQLQNLQELHLS-GNQLTTFPKEIGQLKNLQTL-V 121

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           +       LP E+G L+ L  L ++   ++ LP+ +GQL  L +L L   ++L+ +   I
Sbjct: 122 LSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLY-ANQLKTLPKEI 180

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
            +L+++  + +S       + ++   + +   ++ +   VL LN  ++L++LP  +   K
Sbjct: 181 GQLQNLRELHLS-------YNQLKTLSAEIGQLQNL--QVLDLND-NQLKTLPKEIGQLK 230

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
           +L  L++ +  + + +P+E+G L+ L+ L +     + VP+ + QL   ++     + F+
Sbjct: 231 NLQMLDL-NNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFK 289

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           ++P      K+L  L + +      LP+EI  L+ L+ L +    ++ +   +GQL +L+
Sbjct: 290 TVPEETGQLKNLQMLSL-NANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLK 348

Query: 531 WLVLSDNNLQIIPESL 546
            L L DN L  +P+ +
Sbjct: 349 KLSLRDNQLTTLPKEI 364



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 7/135 (5%)

Query: 456 LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
           L LS+ KLK      +LP  +   ++L  LE+ +      LP EIG L+ L+ L + G  
Sbjct: 51  LDLSEQKLK------TLPKEIGQLQNLQVLEL-NNNQLATLPKEIGQLQNLQELHLSGNQ 103

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           +   P+ +GQL +L+ LVLS N L  +P+ + QL +L  L L+ N L+ +P+ +  L +L
Sbjct: 104 LTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNL 163

Query: 576 KYLDLFENNLDRIPE 590
           + L+L+ N L  +P+
Sbjct: 164 QQLNLYANQLKTLPK 178



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 66/323 (20%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL------------GYCSSLT 125
           T L   ++N + ++ +DL   KL T   ++   QNL++L+L            G   +L 
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95

Query: 126 ETHSS----------IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           E H S          I  L  L+ L L + + LT+LP  I   K L+ L L   + LK L
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNR-LTTLPKEIGQLKNLRELYL-NTNQLKTL 153

Query: 175 PK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           PK +        L L    ++ LP  I  L N+ EL + S  +L+ +S+ I +LQ L+ +
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQVL 212

Query: 234 ------------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
                        I +  NLQ L++ +                       PE +  GQ  
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTV-----------------PEEI--GQ-- 251

Query: 282 FKSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              L +L+++D     F+ +P+E+G L+ L  L ++    + +PE  GQL  L  L L N
Sbjct: 252 ---LKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSL-N 307

Query: 340 CSELEYISSSIFKLKSVESIEIS 362
            ++L  + + I +LK++  + +S
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLS 330


>gi|297801410|ref|XP_002868589.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314425|gb|EFH44848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 169/339 (49%), Gaps = 32/339 (9%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK---NKCMVHSLEGVPFT-ELRYFEWHQFPL 56
           MSK N ++ I+   F  M  L+ L+F  +        +  LE + +   LR  +W+ +P 
Sbjct: 533 MSK-NVKLSISKRAFEGMRNLKFLRFYKADFCPGNVSLRILEDIDYLPRLRLLDWYAYPG 591

Query: 57  KTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           K L      E L+ L M  SK+ +LW+ +Q L +LK IDL +S  L ++PDLS A  L+I
Sbjct: 592 KRLPPTFQPEYLIELHMKFSKLEKLWEGIQPLKNLKEIDLSFSYKLKEIPDLSNASKLKI 651

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L L YC+SL +  SSI  L KL+ L++  C+ L  +PT+I+   L+ + +  CS L++ P
Sbjct: 652 LTLSYCTSLVKLPSSISNLQKLKKLNVSSCEKLKVIPTNINLASLEEVDMSFCSLLRSFP 711

Query: 176 KMTSCHLRSTLPLLGVGIEE-LPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLES 232
            ++    +  L ++   IE+  PSS + LS + EL I   S +RL ++  S+ KL    S
Sbjct: 712 DISRNIKK--LNVVSTQIEKGSPSSFRRLSCLEELFIGGRSLERLTHVPVSLKKLDISHS 769

Query: 233 IRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
                       ++P C +       Q    L ++ C +  SL S   +  SL SL   +
Sbjct: 770 ---------GIEKIPDCVLG-----LQQLQSLIVESCTKLVSLTS---LPPSLVSLNAKN 812

Query: 293 CPNFERL----PDELGNLQALNRLIIDGTAIRELPEGLG 327
           C + ER+     D + +L+  N L +D  A R +    G
Sbjct: 813 CVSLERVCCSFQDPIKDLRFYNCLKLDEEARRAIIHQRG 851



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 56/307 (18%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++L+ K SKLE L   +   K+L  +++    KL+ +PD L N   L+ L +   T
Sbjct: 600 PEYLIELHMKFSKLEKLWEGIQPLKNLKEIDLSFSYKLKEIPD-LSNASKLKILTLSYCT 658

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIID---CKNFMRLPDEI 500
            + ++P S++ L  L KL +  C   + +P+ +    +L SLE +D   C      PD  
Sbjct: 659 SLVKLPSSISNLQKLKKLNVSSCEKLKVIPTNI----NLASLEEVDMSFCSLLRSFPDIS 714

Query: 501 GNLEYLKVLTI---KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS-SLVSLK 556
            N++ L V++    KG+     P S  +LS LE L +   +L    E L  +  SL  L 
Sbjct: 715 RNIKKLNVVSTQIEKGS-----PSSFRRLSCLEELFIGGRSL----ERLTHVPVSLKKLD 765

Query: 557 LSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV------ 610
           +S++ +E+IP+ +  L  L+ L + E+    +   L S P S+ S      +S+      
Sbjct: 766 ISHSGIEKIPDCVLGLQQLQSL-IVESCTKLVS--LTSLPPSLVSLNAKNCVSLERVCCS 822

Query: 611 ------DLR--NCLKLDPNELSEII--KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
                 DLR  NCLKLD      II  +  W              +  PG E+P  F H+
Sbjct: 823 FQDPIKDLRFYNCLKLDEEARRAIIHQRGDW-------------DVCLPGKEVPAEFTHK 869

Query: 661 STGSTIS 667
           + G++I+
Sbjct: 870 AIGNSIT 876



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 22/181 (12%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++E+P+ L   + L  L L  C+ L  + SSI  L+ ++ + +S+C  LK  P     NI
Sbjct: 637 LKEIPD-LSNASKLKILTLSYCTSLVKLPSSISNLQKLKKLNVSSCEKLKVIP----TNI 691

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           + + +E +  S      CS L S P    + +++  L ++  +  +  P     L  LEE
Sbjct: 692 NLASLEEVDMSF-----CSLLRSFPD---ISRNIKKLNVVSTQIEKGSPSSFRRLSCLEE 743

Query: 439 LRVEGTGIR---EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           L + G  +     VP SL +L +S       S  E +P  +   + L SL +  C   + 
Sbjct: 744 LFIGGRSLERLTHVPVSLKKLDISH------SGIEKIPDCVLGLQQLQSLIVESCTKLVS 797

Query: 496 L 496
           L
Sbjct: 798 L 798


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 26/321 (8%)

Query: 282 FKSLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            + L +L+++D        LP E+G LQ L  L +    +   P+ +G+L  L  L L +
Sbjct: 112 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-S 170

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++++ I   I KL+ ++S+ + N + L   P+       + + N+  + I+ +P  + K
Sbjct: 171 ANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEK 229

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   + L SL + D  +L  LP E+G L+ L+ L +    
Sbjct: 230 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQ 288

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGN 502
           +  +P+ +  L  L  L L   +   ++P  +     L +L+++D  N     LP EIG 
Sbjct: 289 LTTIPQEIGHLQNLQDLYLV-SNQLTTIPKEI---GQLQNLQMLDLGNNQLTILPKEIGK 344

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L+ L+ L +    +  +P+ +GQL +L+ L LS+N L  IP+ + QL +L  L LSNN L
Sbjct: 345 LQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 404

Query: 563 ERIPERLDPLSSLKYLDLFEN 583
             IP+ +  L +L+ L L  N
Sbjct: 405 ITIPKEIGQLQNLQTLYLRNN 425



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 181/392 (46%), Gaps = 59/392 (15%)

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           E P    D T++ + P        SE KLK  P+             L +L+++D  + +
Sbjct: 31  EEPGTYQDLTKALQNPLDVRVLDLSEQKLKALPKK---------IGQLKNLQMLDLSDNQ 81

Query: 298 R--LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              LP E+  L+ L  L +    +  LP+ + QL  L  L+L+  ++L  +   I KL++
Sbjct: 82  LIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLR-SNQLTILPKEIGKLQN 140

Query: 356 VESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           ++ + +SN + L  FP+       + + N+  + I+ IP  + KL K   L  LP++   
Sbjct: 141 LQELYLSN-NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL-YLPNN--- 195

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCS 467
                        +L  LP E+G L+ L+ L +    I+ +P+ + +L  L  L L K +
Sbjct: 196 -------------QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHK-N 241

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
              +LP  +   + L SL + D      LP EIG L+ LKVL +    +  +P+ +G L 
Sbjct: 242 QLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 300

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
           +L+ L L  N L  IP+ + QL +L  L L NN L  +P+ +  L +L+ L L  N L  
Sbjct: 301 NLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTT 360

Query: 588 IPEYLRSFP------------TSIPSEFTSLR 607
           IP+ +                T+IP E   L+
Sbjct: 361 IPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 392



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 24/225 (10%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
           +KL+ LP ++G L+ L+ L +    +  +PK + QL  L  L L   +    LP  +   
Sbjct: 57  QKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSD-NQLIILPKEI--- 112

Query: 480 KSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
           + L +L+++D +      LP EIG L+ L+ L +    +   P+ +G+L  L+WL LS N
Sbjct: 113 RQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSAN 172

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP- 596
            ++ IP+ + +L  L SL L NN L  +P+ +  L  L++L+L  N +  +P+ +     
Sbjct: 173 QIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQK 232

Query: 597 -----------TSIPSEFTSLR----LSVDLRNCLKLDPNELSEI 626
                      T++P E   L+    L +D  N L   P E+ ++
Sbjct: 233 LQWLYLHKNQLTTLPQEIEKLQKLESLGLD-NNQLTTLPQEIGQL 276



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 181/423 (42%), Gaps = 65/423 (15%)

Query: 45  ELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           ++R  +  +  LK L   I   +NL  L +  +++  L  +++ L +L+ +DL  ++L+ 
Sbjct: 48  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLII 107

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
              ++   +NL++LDL   + LT     I  L  L+ L L   + LT+ P  I      +
Sbjct: 108 LPKEIRQLKNLQMLDL-RSNQLTILPKEIGKLQNLQELYLSNNQ-LTTFPKEIGKLQKLQ 165

Query: 163 LVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            +    + +K +PK +       +L L    +  LP  I  L  + + L  S  +++ + 
Sbjct: 166 WLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL-QWLNLSYNQIKTLP 224

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
             I KLQ L+ + +H+    Q   +P                 +++K  + ESL      
Sbjct: 225 QEIEKLQKLQWLYLHKN---QLTTLPQ----------------EIEKLQKLESLG----- 260

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
                    +D      LP E+G LQ L  L ++   +  +P+ +G L  L  L L   +
Sbjct: 261 ---------LDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLV-SN 310

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
           +L  I   I +L++++ +++ N                 + +  +P  + KL        
Sbjct: 311 QLTTIPKEIGQLQNLQMLDLGN-----------------NQLTILPKEIGKLQNLQELYL 353

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             ++L ++P  +   ++L  L  +   +L  +P E+G L+ L+EL +    +  +PK + 
Sbjct: 354 SNNQLTTIPKEIGQLQNLQEL-YLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIG 412

Query: 455 QLA 457
           QL 
Sbjct: 413 QLQ 415


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 24/325 (7%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L++ D      LP ELG L AL  L +   A+  LP  +GQL  L KL L   ++L  + 
Sbjct: 10  LDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTE-NQLTSVP 68

Query: 348 SSIFKLKSVESIEISNCSNLKGFP-EIPFCN------IDGSGIERIPSSVLKLNKCSKL- 399
           + I +L S+  +++S+ + L   P EI          + G+ +  +P+ + +L    KL 
Sbjct: 69  AEIGQLASLRVLDLSD-NQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLL 127

Query: 400 ------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
                  S+P+ +    SL  L + D  +L  +P E+G L +L E  + G  +  VP  +
Sbjct: 128 LDDNELTSVPAEIGQLTSLEVLGLTD-NQLTSVPAEIGQLASLTESGLSGNRLASVPAEI 186

Query: 454 AQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLE--IIDCKNFMRLPDEIGNLEYLKVLT 510
             LA L++L L   +   S+P+ +     LTSL+   +D      +P+E G L  L VL+
Sbjct: 187 GLLASLTELFLSG-NQLTSVPAEI---GQLTSLQELWLDDNELTSVPEETGQLASLMVLS 242

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           ++   +  VP  +GQL+SL+ L L  N L  +P  + QL+ L  L L +N L  +P  + 
Sbjct: 243 LRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIG 302

Query: 571 PLSSLKYLDLFENNLDRIPEYLRSF 595
            L SL+ L L +N L  +P  +R  
Sbjct: 303 QLRSLEKLYLDDNKLTSVPAEIREL 327



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 40/271 (14%)

Query: 282 FKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              L SL ++D  +     LP E+G L AL  L + G  +  +P  + QL  L KL L +
Sbjct: 71  IGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDD 130

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFP-EI-PFCNIDGSGIERIPSSVLKLNKCS 397
            +EL  + + I +L S+E + +++ + L   P EI    ++  SG+             +
Sbjct: 131 -NELTSVPAEIGQLTSLEVLGLTD-NQLTSVPAEIGQLASLTESGL-----------SGN 177

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
           +L S+P+ + +  SLT L  +   +L  +P E+G L +L+EL ++   +  VP+   QLA
Sbjct: 178 RLASVPAEIGLLASLTEL-FLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLA 236

Query: 458 -LSKLKLK---------KCSSFESLPSRLYVSKSLTSL--EI----------IDCKNFMR 495
            L  L L+         +     SL S       LTS+  EI          +D      
Sbjct: 237 SLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTS 296

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
           +P EIG L  L+ L +    +  VP  + +L
Sbjct: 297 VPAEIGQLRSLEKLYLDDNKLTSVPAEIREL 327


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 41/358 (11%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P ELG L AL  L + G  +  LP  +GQLA L  LEL   +EL  +   I++L S+E 
Sbjct: 21  VPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLEL-GYNELTSVPVEIWQLASLEG 79

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKS 411
           + +                  G+ +  +P+ + +L        + ++L S+P+ +    S
Sbjct: 80  LYLG-----------------GNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTS 122

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES 471
           LT L++ D  +L  +P E+  L +L  L +    +  VP  + QL   +      +   S
Sbjct: 123 LTQLDLRD-NQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTS 181

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           +P+ ++   +L  L + + +    +P EI  L  L  L + G  +  VP  +GQL+SL  
Sbjct: 182 VPAEIWQLAALVKLSVTENQ-LTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTA 240

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
           L L DN L  +P  + Q+ SLV L L  N L  +P  +  L +     L E  LD     
Sbjct: 241 LSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRA-----LVEFELD----- 290

Query: 592 LRSFPTSIPSEFTSLRLSVDLR---NCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
            R+  TS+P+E   L    +L    N L   P+E+ ++   G +  S N  T +  +M
Sbjct: 291 -RNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAM 347



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 106/240 (44%), Gaps = 47/240 (19%)

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           +P ELG L AL +L + G  +  +P  + QLA                       SL SL
Sbjct: 21  VPAELGRLSALMDLNLGGNQLTLLPAEIGQLA-----------------------SLESL 57

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
           E+        +P EI  L  L+ L + G  +  VP  +GQL+SLE L L  N L  +P  
Sbjct: 58  EL-GYNELTSVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTE 116

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP--------- 596
           + QL+SL  L L +N L  +P  +  L+SL YL+L +N L  +P  +R            
Sbjct: 117 IGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSA 176

Query: 597 ---TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEI 653
              TS+P+E   L   V     L +  N+L+ +  + W   S+         +Y  GN++
Sbjct: 177 NHLTSVPAEIWQLAALVK----LSVTENQLTSVPAEIWQLTSL-------TELYLHGNQL 225


>gi|39104607|dbj|BAC43641.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 4/178 (2%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLN-I 61
           SE+ I    F +M  L+ LK   SK+     +H  E + F   LR  +W  +P K+L   
Sbjct: 543 SEVSIRKKAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDFPCLLRLLDWKAYPSKSLPPT 602

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E+LV L M  S++  LW   Q L +LK++DL  SK L +LPDLS A NLE L L  C
Sbjct: 603 FNPEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATNLEYLYLMGC 662

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            SL E  SSI +L+KLE+L    C +L  +P  ++ + L+ + L GCS L+N+P M++
Sbjct: 663 ESLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNLESLQTVYLGGCSRLRNIPVMST 720



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 38/317 (11%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++LN   S+LE L       K+L  +++   K L++LPD L N   LE L + G  
Sbjct: 605 PEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPD-LSNATNLEYLYLMGCE 663

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + E+P S++ L  L  L    C + E +P+ + + +SL ++ +  C     +P    N+
Sbjct: 664 SLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNL-ESLQTVYLGGCSRLRNIPVMSTNI 722

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
            YL    I  TA+  VP   G L +L+  V    N + +   L   +SL +L L   ++E
Sbjct: 723 RYL---FITNTAVEGVPLCPG-LKTLD--VSGSRNFKGLLTHLP--TSLTTLNLCYTDIE 774

Query: 564 RIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSE----------FTSLRLSVDL 612
           RIP+    L  LK ++L     L  +PE  RS  T +  +            +L+ S   
Sbjct: 775 RIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDCESLETVFCPLNTLKASFSF 834

Query: 613 RNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            NC KLD      II+          +++       PG E+P  F H++ G +++++   
Sbjct: 835 ANCFKLDREARRAIIQ----------QSFFMGKAVLPGREVPAVFDHRAKGYSLTIR--- 881

Query: 673 PTGYNKLMGFAFCVVVA 689
           P G N    F FCVVV+
Sbjct: 882 PDG-NPYTSFVFCVVVS 897


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  105 bits (262), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  101 bits (252), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVSL----TDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|15222558|ref|NP_176572.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325006|gb|AAG52448.1|AC010852_5 putative disease resistance protein; 24665-28198 [Arabidopsis
           thaliana]
 gi|332196042|gb|AEE34163.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 4/178 (2%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKC--MVHSLEGVPFT-ELRYFEWHQFPLKTLN-I 61
           SE+ I    F +M  L+ LK   SK+     +H  E + F   LR  +W  +P K+L   
Sbjct: 543 SEVSIRKKAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDFPCLLRLLDWKAYPSKSLPPT 602

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E+LV L M  S++  LW   Q L +LK++DL  SK L +LPDLS A NLE L L  C
Sbjct: 603 FNPEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATNLEYLYLMGC 662

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            SL E  SSI +L+KLE+L    C +L  +P  ++ + L+ + L GCS L+N+P M++
Sbjct: 663 ESLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNLESLQTVYLGGCSRLRNIPVMST 720



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 38/317 (11%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-T 444
           P  +++LN   S+LE L       K+L  +++   K L++LPD L N   LE L + G  
Sbjct: 605 PEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPD-LSNATNLEYLYLMGCE 663

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            + E+P S++ L  L  L    C + E +P+ + + +SL ++ +  C     +P    N+
Sbjct: 664 SLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNL-ESLQTVYLGGCSRLRNIPVMSTNI 722

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
            YL    I  TA+  VP   G L +L+  V    N + +   L   +SL +L L   ++E
Sbjct: 723 RYL---FITNTAVEGVPLCPG-LKTLD--VSGSRNFKGLLTHLP--TSLTTLNLCYTDIE 774

Query: 564 RIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSE----------FTSLRLSVDL 612
           RIP+    L  LK ++L     L  +PE  RS  T +  +            +L+ S   
Sbjct: 775 RIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDCESLETVFCPLNTLKASFSF 834

Query: 613 RNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQ 672
            NC KLD      II+          +++       PG E+P  F H++ G +++++   
Sbjct: 835 ANCFKLDREARRAIIQ----------QSFFMGKAVLPGREVPAVFDHRAKGYSLTIR--- 881

Query: 673 PTGYNKLMGFAFCVVVA 689
           P G N    F FCVVV+
Sbjct: 882 PDG-NPYTSFVFCVVVS 897


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 47/398 (11%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ES+P        L  L +I       +PD + NL  L +LI+    I ++PE + +L+ L
Sbjct: 93  ESIPDVVTQILHLEELILIRV-ELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNL 151

Query: 333 SKLELKNCSELEYISSSIFKLKSVESI--EISNCSNLKGFPEIPFCNIDGSGIERIPSSV 390
           + L              IF    +  I   I+N +NL         N+  + I +IP  +
Sbjct: 152 TVL--------------IFSDNKITQIPEAIANLTNLTRL------NLSSNQITQIPEVI 191

Query: 391 LKLNKCS-------KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
            KL   +       ++  +P ++    +LT L++ D  K+  +P+ +     L  L +  
Sbjct: 192 AKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSD-NKITEIPEAITQSTNLTVLDLSS 250

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             I ++P+++AQL   KL     +    +P  L    +L  L +        +P+ + NL
Sbjct: 251 NQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHL-SSNQITEIPEALANL 309

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
             L  L + G  I E+PE+L  L +L  L L  N +  IPE+L  L++L+ L L +N + 
Sbjct: 310 TNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIA 369

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP--TSIPSEFTSL----RLSVDLRNC-- 615
            IPE L  L++L  L LF N +  IPE L      T +   F  +    ++  +L N   
Sbjct: 370 EIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTE 429

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEI 653
           L L  N++++I       +++   T +T+ +YF  N+I
Sbjct: 430 LHLSSNQITQI------PEALANLTNLTQ-LYFSSNQI 460



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 36/309 (11%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           LE +   N + LP EL  L  L +L I G  +  +P+ + Q+  L +L L    EL  I 
Sbjct: 61  LEKVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRV-ELTEIP 119

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
            +I           +N +NL                      +L  N+ +++   P ++ 
Sbjct: 120 DAI-----------ANLTNLTQL-------------------ILSYNQITQI---PEAIA 146

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS 467
              +LT L I    K+ ++P+ + NL  L  L +    I ++P+ +A+L    L     +
Sbjct: 147 KLSNLTVL-IFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGN 205

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
               +P  +    +LT L++ D K    +P+ I     L VL +    I ++PE++ QL+
Sbjct: 206 QITEIPEAIAQLTNLTLLDLSDNK-ITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLT 264

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
           +L+ L LSDN +  IPE+L  L++L+ L LS+N +  IPE L  L++L  L L  N +  
Sbjct: 265 NLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITE 324

Query: 588 IPEYLRSFP 596
           IPE L + P
Sbjct: 325 IPEALANLP 333



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 234/557 (42%), Gaps = 104/557 (18%)

Query: 98  SKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR------------- 144
            K L +L D ++A+    LDL     LTE    I  L +LE L L +             
Sbjct: 3   QKELLQLIDRAVAEGWRELDLS-GQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFL 61

Query: 145 ----CKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELP 197
                 +L +LP  +     L++L + G + L+++P + +   HL   L L+ V + E+P
Sbjct: 62  EKVSGNNLKTLPLELLGLPNLRKLDISG-NPLESIPDVVTQILHLEE-LILIRVELTEIP 119

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
            +I  L+N+ +L I S  ++  I  +I KL            NL  L      I      
Sbjct: 120 DAIANLTNLTQL-ILSYNQITQIPEAIAKLS-----------NLTVLIFSDNKIT----- 162

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
                            +P       +LT L +       ++P+ +  L  L  L + G 
Sbjct: 163 ----------------QIPEAIANLTNLTRLNL-SSNQITQIPEVIAKLTNLTLLYLSGN 205

Query: 318 AIRELPEGLGQLALLSKLELK---------------NCSELEYISSSIFKLKSVESIEIS 362
            I E+PE + QL  L+ L+L                N + L+  S+ I K+       I+
Sbjct: 206 QITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEA----IA 261

Query: 363 NCSNLK-------GFPEIPFC----------NIDGSGIERIPSSVLKLNKCSKL------ 399
             +NLK          EIP            ++  + I  IP ++  L   ++L      
Sbjct: 262 QLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQ 321

Query: 400 -ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA- 457
              +P +L    +LT L +    ++  +P+ L NL  L +L +    I E+P++LA L  
Sbjct: 322 ITEIPEALANLPNLTRLYLY-SNQITEIPEALANLTNLIQLVLFSNQIAEIPETLANLTN 380

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L +L L   +    +P  L    +LT L++       ++P  I NL  L  L +    I 
Sbjct: 381 LIQLVLF-SNQIAEIPETLAKLTNLTRLDL-RFNQITQIPKVIANLTNLTELHLSSNQIT 438

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
           ++PE+L  L++L  L  S N +  IP ++ +L++L  L LS N +  IPE ++ LS L+ 
Sbjct: 439 QIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEK 498

Query: 578 LDLFENNLDRIPEYLRS 594
           LDL  N L   PE L S
Sbjct: 499 LDLRGNPLPISPEILGS 515



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 21/286 (7%)

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP---FC 376
           R + EG  +L L       +  EL  +   I KL+ +ES+ +     ++G+  +      
Sbjct: 12  RAVAEGWRELDL-------SGQELTELPVEIGKLQQLESLILG--KKVEGYERVGDHFLE 62

Query: 377 NIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
            + G+ ++ +P  +L L    KL       ES+P  +     L  L +I  + L  +PD 
Sbjct: 63  KVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVE-LTEIPDA 121

Query: 430 LGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIID 489
           + NL  L +L +    I ++P+++A+L+   + +   +    +P  +    +LT L +  
Sbjct: 122 IANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNL-S 180

Query: 490 CKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL 549
                ++P+ I  L  L +L + G  I E+PE++ QL++L  L LSDN +  IPE++ Q 
Sbjct: 181 SNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQS 240

Query: 550 SSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           ++L  L LS+N + +IPE +  L++LK L L +N +  IPE L + 
Sbjct: 241 TNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANL 286



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 187/433 (43%), Gaps = 99/433 (22%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           NL  L + G+++T++ + +  L +L  +DL  +K+ T++P+ ++ + NL +LDL   + +
Sbjct: 196 NLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKI-TEIPEAITQSTNLTVLDLS-SNQI 253

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           T+   +I  L  L++L L   + +T +P +                L NL  +   HL S
Sbjct: 254 TKIPEAIAQLTNLKLLYLSDNQ-ITEIPEA----------------LANLTNLMQLHLSS 296

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
                   I E+P ++  L+N+ +L + S  ++  I  ++  L           PNL  L
Sbjct: 297 N------QITEIPEALANLTNLTQLYL-SGNQITEIPEALANL-----------PNLTRL 338

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
            + S  I                       +P       +L  L ++       +P+ L 
Sbjct: 339 YLYSNQIT---------------------EIPEALANLTNLIQL-VLFSNQIAEIPETLA 376

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           NL  L +L++    I E+PE L +L  L++L+L+         + I ++  V    I+N 
Sbjct: 377 NLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLR--------FNQITQIPKV----IANL 424

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           +NL         ++  + I +IP ++  L   ++L         F S          ++ 
Sbjct: 425 TNLTEL------HLSSNQITQIPEALANLTNLTQL--------YFSS---------NQIT 461

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLT 483
           ++P  +  L  L +L + G  I E+P+++  L+ L KL L + +     P  L  S  + 
Sbjct: 462 QIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDL-RGNPLPISPEILGSSDDVG 520

Query: 484 SLEIIDCKNFMRL 496
           S+E  D  N+++L
Sbjct: 521 SVE--DIFNYLQL 531


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 15/293 (5%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E+G LQ L  L +    +  LP+ +G L  L KL+L   +++  +   I +L+S++ 
Sbjct: 52  LPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDL-GFNKITVLPKEIGQLQSLQE 110

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + +S       F ++     +   ++ +    L LN+ +   +LP  +   ++L  L  +
Sbjct: 111 LNLS-------FNQLATLPKEIGNLQHLKRLFLGLNQFT---ALPEEIGKLQNLQEL-YL 159

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  +L  LP E+GNL+ L+EL +    +  +PK + +L  L KL L + +   +LP  + 
Sbjct: 160 NENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNR-NQLTTLPIEIG 218

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L  L + D      LP EIG L+ L+ L +    +  +P  +  L  L+WL L+ N
Sbjct: 219 NLQNLQGLNL-DKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKN 277

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L  IP+ +  L +L  L LS+N L  IP+ ++ L  L+ LDL+ N L  +P+
Sbjct: 278 QLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPK 330



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 27/335 (8%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           +D  +F  L + L N   +  L ++G  +  LPE +GQL  L +L L   ++L  +   I
Sbjct: 21  LDAEDFHTLNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWE-NKLTTLPQEI 79

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             L+ ++ +++       GF +I     +   ++ +    L  N+ +   +LP  +   +
Sbjct: 80  GNLQHLQKLDL-------GFNKITVLPKEIGQLQSLQELNLSFNQLA---TLPKEIGNLQ 129

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF 469
            L  L  +   +   LP+E+G L+ L+EL +    +  +PK +  L  L +L L + +  
Sbjct: 130 HLKRL-FLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNE-NQL 187

Query: 470 ESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSL 529
            +LP  +   ++L  L +++      LP EIGNL+ L+ L +    +  +P+ +G+L +L
Sbjct: 188 TALPKEIGKLQNLQKL-VLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNL 246

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           + L L +N L  +P  +  L  L  L L+ N L  IP+ +  L +LK L+L  N L  IP
Sbjct: 247 QGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIP 306

Query: 590 EYLRSFP------------TSIPSEFTSLRLSVDL 612
           + + +              T++P E   L+   DL
Sbjct: 307 KEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDL 341



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 156/392 (39%), Gaps = 111/392 (28%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  L +  +K+T L  ++ NL  L+++DL ++K +T LP           ++G 
Sbjct: 56  IGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNK-ITVLPK----------EIGQ 104

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMT 178
             SL E + S                 L +LP  I + ++LKRL L G +    LP ++ 
Sbjct: 105 LQSLQELNLSF--------------NQLATLPKEIGNLQHLKRLFL-GLNQFTALPEEIG 149

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                  L L    +  LP  I  L N+ EL + +  +L  +   I KLQ L+ + ++R 
Sbjct: 150 KLQNLQELYLNENQLTTLPKEIGNLQNLQELYL-NENQLTALPKEIGKLQNLQKLVLNR- 207

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
                                                         LT+L          
Sbjct: 208 --------------------------------------------NQLTTL---------- 213

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
            P E+GNLQ L  L +D   +  LP+ +G+L  L  L L N            KL ++  
Sbjct: 214 -PIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNN-----------KLTAL-P 260

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKS 411
           IEI N   LK      +  ++ + +  IP  +  L          ++L ++P  +   + 
Sbjct: 261 IEIENLQKLK------WLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQK 314

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
           L +L++ +  +L  LP E+G L+ L++L + G
Sbjct: 315 LETLDLYN-NQLTTLPKEIGKLQNLQDLYLGG 345


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 20/277 (7%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK------NKCMVHSLEGVPFT--ELRYFEWH 52
           M ++  E+ +   TF++M  LR LKF  S+        C ++  EGV F+  E+RY  W 
Sbjct: 557 MFELKKELPLEKCTFTEMRNLRYLKFYSSRCHQEGEADCKINFPEGVEFSLDEVRYLYWL 616

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPL+ L    + +NL  L +P S++ ++W+ +++   LK +DL +S  L  L  L  A+
Sbjct: 617 KFPLEKLPKDFNPKNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKLCNLTGLLNAK 676

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           +L+ L+L  C+SL E  S ++ L  L  L++  C SL  LP  ++   +K L+L  CS+L
Sbjct: 677 SLQRLNLEGCTSLEELPSEMKSLENLVFLNMRGCTSLRVLP-HMNLISMKTLILTNCSSL 735

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +   ++ S ++  TL L G  I +LP ++  L  +  L +  CK L  +   + +L+ L+
Sbjct: 736 EEF-QVISDNIE-TLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGRLKALQ 793

Query: 232 SIRIHRCPNLQFLEMPSCN--------IDGTRSKEQP 260
            + +  C  L+   +P  N        +DGT  KE P
Sbjct: 794 ELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKEIP 830



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 225/533 (42%), Gaps = 79/533 (14%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
             E+LP +  N + L  L +  + I E+ EGL     L  ++L + S+L  ++  +   KS
Sbjct: 620  LEKLPKDF-NPKNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKLCNLTG-LLNAKS 677

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTS 414
            ++ + +  C++L+  P         S ++ + + V L +  C+ L  LP    +  S+ +
Sbjct: 678  LQRLNLEGCTSLEELP---------SEMKSLENLVFLNMRGCTSLRVLPHMNLI--SMKT 726

Query: 415  LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
            L + +C  LE       N+E L    ++GT I ++P ++ +L  L  L LK C    ++P
Sbjct: 727  LILTNCSSLEEFQVISDNIETL---YLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVP 783

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
              L   K+L  L +  C      P  I N++ L++L + GT I+E+P+ L   SS     
Sbjct: 784  QCLGRLKALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKEIPKILQYNSS----- 838

Query: 534  LSDNNLQIIPESLNQLSSLVSLKLSNNNL-ERIPERLDPLSSLKYLDL-FENNLDRIP-- 589
                +L+ +   +  LSSL  L LS N +   +   +  L  LK+LDL +  NL  I   
Sbjct: 839  -KVEDLRELRRGVKGLSSLRRLCLSRNGMISNLQIDISQLYHLKWLDLKYCKNLTSISLL 897

Query: 590  ------------EYLRSF--PTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQS 635
                        E L++   P ++P     +R      NC KL+    + I      K  
Sbjct: 898  PPNLEILDAHGCEKLKTVASPMALPKLMEQVRSKFIFTNCNKLEQVAKNSITLYAQRKCQ 957

Query: 636  VNG-----ETYITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
            ++      E  +++++    FPG+E+P WF HQ+ GS + LK P     N L     C V
Sbjct: 958  LDALRCYKEGTVSEALLITCFPGSEVPSWFNHQTFGSKLKLKFPPHWCDNGLSTLVLCAV 1017

Query: 688  VACSVSECCRHESVEDDRKCNLFDVVCDRRSE-----GYDSYTSSYLGKISHVESDHVFL 742
            V     E  R             D  C+ ++E      +         +   ++SDHVF+
Sbjct: 1018 VKFPRDEINRFS----------IDCTCEFKNEVETCIRFSCTLGGGWIESRKIDSDHVFI 1067

Query: 743  G----SSIFAGENSCKRSDEFF----------FHIDRSCCEVKKCGIHFVHAQ 781
            G    S I        +S E            F +     E+  CG+  V+ +
Sbjct: 1068 GYTSSSHITKHLEGSLKSQEHHKYVPTEASIEFTVRHGAGEIVNCGLSLVYEE 1120


>gi|356495057|ref|XP_003516397.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1067

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 131/269 (48%), Gaps = 34/269 (12%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNK----CMVHSLEGVPFTELRYFEWHQFPLKTL-NI 61
           ++Q++P+ F+KM++L+ L F    N+     + H L+  P  ELRY  W  +PLK+L   
Sbjct: 549 KLQLSPHIFTKMSKLQFLYFPSKYNQDGLSLLPHGLQSFP-VELRYVAWMHYPLKSLPKN 607

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              +N+V   +  S+V +LWD VQNL++LK + +  S+ L +LPDLS A NLE+LD+  C
Sbjct: 608 FSAKNIVMFDLSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPDLSKATNLEVLDINIC 667

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KM 177
             LT    SI  L +L +     C SLT + +  H   L  L L  C  L+        M
Sbjct: 668 PRLTSVSPSILSLKRLSIA---YC-SLTKITSKNHLPSLSFLNLESCKKLREFSVTSENM 723

Query: 178 TSCHLRST-----------------LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
               L ST                 L L   GI  LPSS K L+ +  L +Y  + L  +
Sbjct: 724 IELDLSSTRVNSLPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYLTVYKSRELCTL 783

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSC 249
           +     L+ L++     C +L+ +  PS 
Sbjct: 784 TELPLSLKTLDAT---DCTSLKTVLFPSI 809



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 161/388 (41%), Gaps = 73/388 (18%)

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLA 457
           L+SLP +    K++   ++  C ++E+L D + NL  L+EL+V G+  ++E+P       
Sbjct: 601 LKSLPKNFSA-KNIVMFDL-SCSQVEKLWDGVQNLMNLKELKVSGSENLKELPDLSKATN 658

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLT----SLEIIDCKNFM------------RLPDEIG 501
           L  L +  C    S+   +   K L+    SL  I  KN +            +L +   
Sbjct: 659 LEVLDINICPRLTSVSPSILSLKRLSIAYCSLTKITSKNHLPSLSFLNLESCKKLREFSV 718

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN- 560
             E +  L +  T +  +P S G+ S L+ L L D+ +  +P S   L+ L  L +  + 
Sbjct: 719 TSENMIELDLSSTRVNSLPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYLTVYKSR 778

Query: 561 ---NLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCL 616
               L  +P       SLK LD  +  +L  +      FP SI  +F   R  V   NCL
Sbjct: 779 ELCTLTELP------LSLKTLDATDCTSLKTVL-----FP-SIAQQFKENRKEVLFWNCL 826

Query: 617 KLDPNELSEI--------IKDGWMKQSV----------NGETYITKSMYFPGNEIPKWFR 658
           KLD + L  I        ++  +   S             E+Y  K +Y PG  +P+W  
Sbjct: 827 KLDEHSLKAIGLNAHINVMRFAYQHLSAPDENYDDYDRTYESYQVKYVY-PGGIVPEWME 885

Query: 659 HQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCR------HESVEDDRKCNLFDV 712
           +++T   I +     + ++  +GF F  V++  + +         + +V DD   N    
Sbjct: 886 YKTTKDYIIIDL-SSSPHSSQLGFIFSFVISGPMVKAIMGYRFTFYITVSDDEDEN---- 940

Query: 713 VCDRRSEGYDSYTSSYLGKISHVESDHV 740
               + +  D Y S     I  V SDHV
Sbjct: 941 ----KKDSIDIYMSD---SIVWVASDHV 961



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 41/211 (19%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSS 349
           + C   E+L D + NL  L  L + G+  ++ELP+ L +   L  L++  C  L  +S S
Sbjct: 618 LSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPD-LSKATNLEVLDINICPRLTSVSPS 676

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFCNIDG-SGIERIPS-SVLKLNKCSKLESLPSSLC 407
           I  LK +                I +C++   +    +PS S L L  C KL        
Sbjct: 677 ILSLKRL---------------SIAYCSLTKITSKNHLPSLSFLNLESCKKLREF----- 716

Query: 408 MFKSLTSLEIID----CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA----LS 459
              S+TS  +I+      ++  LP   G    L+ LR+  +GI  +P S   L     L+
Sbjct: 717 ---SVTSENMIELDLSSTRVNSLPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYLT 773

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
             K ++  +   LP       SL +L+  DC
Sbjct: 774 VYKSRELCTLTELPL------SLKTLDATDC 798


>gi|386766573|ref|NP_001247320.1| scribbled, isoform O [Drosophila melanogaster]
 gi|383292968|gb|AFH06637.1| scribbled, isoform O [Drosophila melanogaster]
          Length = 2515

 Score =  105 bits (261), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  101 bits (252), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVS----LTDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  105 bits (261), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVSL----TDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  105 bits (261), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVSL----TDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 167/310 (53%), Gaps = 26/310 (8%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +G+L  L +L L + ++L  +   I KL++++ 
Sbjct: 184 LPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTD-NQLTTLPKEIEKLQNLQW 242

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
           + ++N + L   P+       +   +++ + +  +P  + KL          ++L +LP 
Sbjct: 243 LGLNN-NQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPK 301

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
            +   + L  L + +  +L  LP E+G L+ L+ELR++   +  +P+ + +L     KLK
Sbjct: 302 EIGKLQHLQELHL-ENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQ----KLK 356

Query: 465 KCSS----FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
           K  S    F ++P  ++  ++L +L +   +    LP EIGNL+ L++L +    +  +P
Sbjct: 357 KLYSSGNQFTTVPEEIWNLQNLQALNLYSNQ-LTSLPKEIGNLQNLQLLYLSDNQLATLP 415

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           + +G+L +L+ L LSDN L  +P+ + +L +L  L L +N L  +P+ ++ L SL+YL L
Sbjct: 416 KEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYL 475

Query: 581 FENNLDRIPE 590
            +N L   PE
Sbjct: 476 SDNPLTSFPE 485



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           +LP  +   ++L  L++      M LP EIG L+ L+ L +    +  +PE +G+L +L+
Sbjct: 160 TLPKEIGKLQNLRDLDL-SSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQ 218

Query: 531 WLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L L+DN L  +P+ + +L +L  L L+NN L  +P+ +  L  L+ L L  N L  +P+
Sbjct: 219 ELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPK 278



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 169/375 (45%), Gaps = 43/375 (11%)

Query: 80  LW---DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL--GYCSSLTETHSSIQYL 134
           LW    ++  L +L+ +DL  ++L+T   ++   QNL+ L+L     ++L E    +Q L
Sbjct: 158 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 217

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPK-MTSCHLRSTLPLLGV 191
            +L + D      LT+LP  I    L+ L   G +N  L  LPK +        L L   
Sbjct: 218 QELHLTD----NQLTTLPKEIEK--LQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENN 271

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +  LP  I  L N+ + L  S  +L  +   I KLQ L+ + +    N Q   +P    
Sbjct: 272 QLTTLPKEIGKLQNL-QWLGLSNNQLTTLPKEIGKLQHLQELHLE---NNQLTTLPK--- 324

Query: 252 DGTRSKEQPSSELKL---KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
                K Q   EL+L   +    PE +   Q + K  +S        F  +P+E+ NLQ 
Sbjct: 325 --EIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSS-----GNQFTTVPEEIWNLQN 377

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L  L +    +  LP+ +G L  L  L L + ++L  +   I KL++++ + +S+ + L 
Sbjct: 378 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSD-NQLATLPKEIGKLQNLQLLYLSD-NQLT 435

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             P+      +   ++ +    L+ N   +L +LP  +   +SL  L + D   L   P+
Sbjct: 436 TLPK------EIGKLQNLQELYLRDN---QLTTLPKEIENLQSLEYLYLSD-NPLTSFPE 485

Query: 429 ELGNLEALEELRVEG 443
           E+G L+ L+  R+E 
Sbjct: 486 EIGKLQHLKWFRLEN 500



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 135/319 (42%), Gaps = 46/319 (14%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NL  L +  +++  L +++  L +L+ + L  ++L T   ++   QNL+ L L   + L
Sbjct: 192 QNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLN-NNQL 250

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPKMTS--C 180
           T     I  L KLE L L+  + LT+LP  I    L+ L   G SN  L  LPK      
Sbjct: 251 TTLPKEIGKLQKLEALHLENNQ-LTTLPKEIGK--LQNLQWLGLSNNQLTTLPKEIGKLQ 307

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------- 233
           HL+  L L    +  LP  I  L N+ EL +    RL  +   I KLQ L+ +       
Sbjct: 308 HLQE-LHLENNQLTTLPKEIGKLQNLQELRL-DYNRLTTLPEEIEKLQKLKKLYSSGNQF 365

Query: 234 -----RIHRCPNLQFLEMPSCNIDG--------TRSKEQPSSELKLKKCPRP-ESLPSGQ 279
                 I    NLQ L + S  +             +    S+ +L   P+    L + Q
Sbjct: 366 TTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQ 425

Query: 280 CMFKS---LTSL--EIIDCPNFERL----------PDELGNLQALNRLIIDGTAIRELPE 324
            ++ S   LT+L  EI    N + L          P E+ NLQ+L  L +    +   PE
Sbjct: 426 LLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPE 485

Query: 325 GLGQLALLSKLELKNCSEL 343
            +G+L  L    L+N   L
Sbjct: 486 EIGKLQHLKWFRLENIPTL 504


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 161/317 (50%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 168/386 (43%), Gaps = 70/386 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++ + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSL 415
            LK N   +L +LP  +   K+L  L
Sbjct: 377 NLKYN---QLATLPEEIKQLKNLKKL 399



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +  +L++  +   
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRL-QTLY 331

Query: 275 LPSGQCMF-----KSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
           L + Q  F     + L +LE +D  +     LP E+G LQ L  L +    +  LPE + 
Sbjct: 332 LGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  105 bits (261), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVS----LTDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|357486935|ref|XP_003613755.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515090|gb|AES96713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 790

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 168/373 (45%), Gaps = 55/373 (14%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
           + E+Q +     KM  L++L    ++     + L       LR  +W  +P  +L + H+
Sbjct: 312 DKEVQWDGNALKKMENLKILVIEKARFSIGPNHLP----KSLRVLKWRDYPESSLPV-HF 366

Query: 65  E--NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
           +   LV L +  S +T       N V +  +  KY  +   +PD+S AQNL+ L L    
Sbjct: 367 DPKKLVILDLSMSCIT-----FNNQVIIVSMVSKYVDIYL-VPDMSGAQNLKKLHLDSFK 420

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
           +L E H S+ +L KLE L+L+RC SL  LP  I+   LK +  R C++LK+ P++     
Sbjct: 421 NLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGINLPSLKTMSFRNCASLKSFPEILGKME 480

Query: 183 RST-LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
            +T L L   GI ELP SI  L  +  L I  CK L  + SSIF L  LE++  + C +L
Sbjct: 481 NTTYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLELPSSIFMLPKLETLEAYSCKDL 540

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRP--ESLPSGQCMFKSLTSLEIIDCPNFERL 299
                                  ++KKC     E++ SG    KS+         NF  L
Sbjct: 541 A----------------------RIKKCKGQVHETMYSGA---KSVVDF------NFCHL 569

Query: 300 PDE-----LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
            DE     L  L  +  L +D   I  LP  + +   L +L   NC EL  I      +K
Sbjct: 570 SDEFLATLLPCLHYVRNLSLDYIIITILPSCINECHSLKELTFNNCMELREIRGLPPNIK 629

Query: 355 SVESIEISNCSNL 367
            + +I   NC++L
Sbjct: 630 HISAI---NCTSL 639



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 18/144 (12%)

Query: 299 LPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           +PD  G  Q L +L +D    + E+ + +G L  L  L L  C+ L  +   I  L S++
Sbjct: 402 VPDMSGA-QNLKKLHLDSFKNLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGI-NLPSLK 459

Query: 358 SIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLNKCSKLESL 402
           ++   NC++LK FPEI        +  +  +GI  +P S+        L +++C +L  L
Sbjct: 460 TMSFRNCASLKSFPEILGKMENTTYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLEL 519

Query: 403 PSSLCMFKSLTSLEIIDCKKLERL 426
           PSS+ M   L +LE   CK L R+
Sbjct: 520 PSSIFMLPKLETLEAYSCKDLARI 543



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L LN+C+ L  LP  + +  SL ++   +C  L+  P+ LG +E    L +  TGI E+P
Sbjct: 438 LNLNRCTSLRVLPHGINL-PSLKTMSFRNCASLKSFPEILGKMENTTYLGLSDTGISELP 496

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            S+  L  L+ L + +C     LPS +++   L +LE   CK+  R+
Sbjct: 497 FSIGLLEGLATLTIDRCKELLELPSSIFMLPKLETLEAYSCKDLARI 543



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 6/144 (4%)

Query: 426 LPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLT 483
           +PD  G  + L++L ++    + EV  S+  L  L  L L +C+S   LP  + +  SL 
Sbjct: 402 VPDMSGA-QNLKKLHLDSFKNLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGINLP-SLK 459

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQII 542
           ++   +C +    P+ +G +E    L +  T I E+P S+G L  L  L +     L  +
Sbjct: 460 TMSFRNCASLKSFPEILGKMENTTYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLEL 519

Query: 543 PESLNQLSSLVSLK-LSNNNLERI 565
           P S+  L  L +L+  S  +L RI
Sbjct: 520 PSSIFMLPKLETLEAYSCKDLARI 543


>gi|300697477|ref|YP_003748138.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074201|emb|CBJ53746.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CFBP2957]
          Length = 890

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 170/385 (44%), Gaps = 54/385 (14%)

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           +SI+++R P      +P    D    K+     L  + C   E  P  + +F  L +L +
Sbjct: 171 DSIQLNRLP---IAALPDLTFDIAHLKK-----LATEDCDLHELQPEIENLFL-LETLSL 221

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
               N + LPD +G L AL+ L +  T I+ LP  +G+ + L +L + N S LE + +  
Sbjct: 222 KGAKNLKALPDAVGRLPALSELTLRETGIKTLPP-MGEASALQRLTIDN-SPLEKLPTGF 279

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
             L  + ++ +S+                                 +KL  LPSS     
Sbjct: 280 TALPQLVNLSLSD---------------------------------TKLRELPSSFGNLS 306

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
           +L +L + D  KLE LP   G L  L+ L + G  IR +P      +L  + + +  + E
Sbjct: 307 ALKTLSLQDNPKLESLPQSFGQLSGLQALTLTGNHIRALPSMRGASSLQTMTVAEA-ALE 365

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT-AIREVPESLGQLSSL 529
            LP+      +L  L + D K    LP +IGNL+ LK LT++    +  +P S+ QL  L
Sbjct: 366 KLPADFSTLGNLAHLSLSDTK-LRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHL 424

Query: 530 EWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL-SSLKYLDLFENNLDRI 588
           E L LS N  + +P SLN  S L +L + N +L  +P   D L   L  L L    L  +
Sbjct: 425 EELTLSGNRFRELP-SLNGASGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQLLEL 483

Query: 589 PEYLRSFPTSIPSEFTSLRLSVDLR 613
           P  + +      S  TSL L+ + R
Sbjct: 484 PASVGAL-----SRLTSLTLTKNAR 503



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 203/460 (44%), Gaps = 61/460 (13%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKL-LTKLPDLSLA-QNLEILDLGYCSSLTETHSSIQ 132
           S++ Q   D+++ V ++   ++ ++L +  LPDL+    +L+ L    C  L E    I+
Sbjct: 153 SRLKQAAGDLRSAVRMRSDSIQLNRLPIAALPDLTFDIAHLKKLATEDCD-LHELQPEIE 211

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGV 191
            L  LE L L   K+L +LP ++     L  L LR  + +K LP M        L +   
Sbjct: 212 NLFLLETLSLKGAKNLKALPDAVGRLPALSELTLR-ETGIKTLPPMGEASALQRLTIDNS 270

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            +E+LP+    L  +  L +   K L  + SS   L  L+++ +   P L+ L      +
Sbjct: 271 PLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQDNPKLESLPQSFGQL 329

Query: 252 DGTRSKEQPSSELKLKKCPRPESLPS--GQCMFKSLTSLEIIDCPNFERLPDELGNLQAL 309
            G ++     + ++        +LPS  G    +++T  E       E+LP +   L  L
Sbjct: 330 SGLQALTLTGNHIR--------ALPSMRGASSLQTMTVAEAA----LEKLPADFSTLGNL 377

Query: 310 NRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
             L +  T +RELP  +G L  L  L L+N  +L  + +SI +L  +E + +S       
Sbjct: 378 AHLSLSDTKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLS------- 430

Query: 370 FPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
                     G+    +PS    LN  S L++L               ++   L  LP +
Sbjct: 431 ----------GNRFRELPS----LNGASGLKTL--------------TVENTSLASLPAD 462

Query: 430 LGNL-EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS-RLYVSKSLTSLE 486
              L + L +L +  T + E+P S+  L+ L+ L L K +  E+LP   +   K++  ++
Sbjct: 463 FDALRKHLTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMID 522

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKG---TAIREVPESL 523
           + DC     LP  IG L  L+ L + G     ++++P S+
Sbjct: 523 LSDCPRLRTLPQSIGALSNLRTLDLSGCTSLTLKDLPHSV 562



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 21/254 (8%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
           N +++  P +F +++ L+ L   G+  + +  S+ G   + L+     +  L+ L  +  
Sbjct: 316 NPKLESLPQSFGQLSGLQALTLTGNHIRALP-SMRGA--SSLQTMTVAEAALEKLPADFS 372

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
              NL  L +  +K+ +L  D+ NL +LK + L+ ++ L  LP  S+ Q   + +L    
Sbjct: 373 TLGNLAHLSLSDTKLRELPADIGNLQALKTLTLRNNEKLGALP-ASIKQLPHLEELTLSG 431

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS--KYLKRLVLRGC------SNLKNL 174
           +      S+   + L+ L ++   SL SLP    +  K+L +L L         +++  L
Sbjct: 432 NRFRELPSLNGASGLKTLTVENT-SLASLPADFDALRKHLTQLTLSNTQLLELPASVGAL 490

Query: 175 PKMTSCHLRSTLPLLGVGIEELPS-SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
            ++TS  L          +E LP  S++ L N+  + +  C RL  +  SI  L  L ++
Sbjct: 491 SRLTSLTLTKN-----ARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTL 545

Query: 234 RIHRCPNLQFLEMP 247
            +  C +L   ++P
Sbjct: 546 DLSGCTSLTLKDLP 559


>gi|296089437|emb|CBI39256.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 191/436 (43%), Gaps = 92/436 (21%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEG--------------VPFTELRYFEWH 52
           EIQ    TF+KM +LRLLK         +  ++G              +P  ELRY  W 
Sbjct: 403 EIQFTTETFTKMNKLRLLKIHQDAKYDHIKEIDGDVHFPQVALPEDLKLPSFELRYLHWD 462

Query: 53  QFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
            + LK L    H +NLV L +  S + QLW+  + L  LK I+L +S+ L + P  S+  
Sbjct: 463 GYSLKYLPPNFHPKNLVELNLRCSNIKQLWEGNKVLKKLKVINLNHSQRLMEFPSFSMMP 522

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLEIL L  C SL      I  L  L+ L    C  L   P     KY           +
Sbjct: 523 NLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFP---EIKY----------TM 569

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELP-SSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
           KNL K         L L G  IE+LP SSI+ L  +  L +  CK L  +  +I  L+FL
Sbjct: 570 KNLKK---------LDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICSLRFL 620

Query: 231 ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           + + ++ C  L  L                            ESL S QC+ +    L  
Sbjct: 621 KFLNVNACSKLHRL---------------------------MESLESLQCLEE--LYLGW 651

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIR-ELPEGLGQLALLSKLELKNCSELEYISSS 349
           ++C     LP  L  L +L  L ++G+ I   +      L+LL +L L +C  +E     
Sbjct: 652 LNC----ELP-TLSGLSSLRVLHLNGSCITPRVIRSHEFLSLLEELSLSDCEVMEGALDH 706

Query: 350 IFKLKSVESIEISNCSNLK-GFPE-------IPFCNIDGSGIERIPSSVLKLNK------ 395
           IF L S++ +++SNC  +K G P+       +   ++ G+ I ++P+S+  L+K      
Sbjct: 707 IFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNIHKMPASIHHLSKLKFLWL 766

Query: 396 --CSKLES---LPSSL 406
             C +L+    LPSS+
Sbjct: 767 GHCKQLQGSLKLPSSV 782



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 226/503 (44%), Gaps = 76/503 (15%)

Query: 311  RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
            +L +  TAI EL   +  L+ +  L L+NC  LE + S I+KLKS+ +   S CS L+ F
Sbjct: 1003 KLCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSF 1061

Query: 371  PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            PEI     +   I R     L+L+  S L+ LPSS+   + L  L++ +CK L  +PD +
Sbjct: 1062 PEIT----EDMKILR----ELRLDGTS-LKELPSSIQHLQGLKYLDLENCKNLLNIPDNI 1112

Query: 431  GNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI-- 487
             NL +LE L V G + + ++PK+L   +L++L+L   +  +S+  +L     L  L+I  
Sbjct: 1113 CNLRSLETLIVSGCSKLNKLPKNLG--SLTQLRLLCAARLDSMSCQLPSFSDLRFLKILN 1170

Query: 488  IDCKNFMR--LPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIP 543
            +D  N +   +  +I  L  L+ + +    + E  +P  +  LSSL+ L L  N+   IP
Sbjct: 1171 LDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIP 1230

Query: 544  ESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSE 602
              + QLS L  L LS+   L++IPE   P SSL+ LD   +   R+          + S 
Sbjct: 1231 SGIGQLSKLKILDLSHCEMLQQIPEL--P-SSLRVLD--AHGCIRLESLSSPQSLLLSSL 1285

Query: 603  FTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQST 662
            F   +  +    C  +    LS ++  G+    VN    I++S     + I +   HQ  
Sbjct: 1286 FKCFKSEIQELECRMV----LSSLLLQGFFYHGVN--IVISES-----SGILEGTWHQ-- 1332

Query: 663  GSTISLKTPQPTGY--NKLMGFAFCVVVA---------------CSVSECCRHESVEDDR 705
            GS ++++ P    Y  N  +GFA C   +               C+   C    + E   
Sbjct: 1333 GSQVTMELPW-NWYENNNFLGFALCSAYSSLDNESEDGDGDGYPCTFKCCLTFWASESGW 1391

Query: 706  KCNL-FDVVCDRRSEG------YDSYTSSYLGKISHVESDHVFLGSSIFAGENSCKRSDE 758
            +C L     C   ++G      +  Y      +++ V   H  L +S             
Sbjct: 1392 QCELPLKSRCTCYNDGGVSDQVWVMYYPKGAFRMNPVSVKHGSLSAS------------- 1438

Query: 759  FFFHIDRSCCEVKKCGIHFVHAQ 781
            F  +I     +VKKC + F+ +Q
Sbjct: 1439 FHGYIHGRAVKVKKCAVQFLFSQ 1461



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 161/382 (42%), Gaps = 53/382 (13%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC-------NIDGSGIE 384
           L  L L+ C  L+ +   I +L+ ++++   +CS L+ FPEI +        ++ G+ IE
Sbjct: 524 LEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIE 583

Query: 385 RIPSS---------VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
           ++PSS          L L  C  L  LP ++C  + L  L +  C KL RL + L +L+ 
Sbjct: 584 KLPSSSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKFLNVNACSKLHRLMESLESLQC 643

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           LEEL + G    E+P      +L  L L        +         L  L + DC+    
Sbjct: 644 LEELYL-GWLNCELPTLSGLSSLRVLHLNGSCITPRVIRSHEFLSLLEELSLSDCEVMEG 702

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
             D I +L  LK L +    + +                     + IP+ + +LSSL +L
Sbjct: 703 ALDHIFHLSSLKELDLSNCYLMK---------------------EGIPDDIYRLSSLQAL 741

Query: 556 KLSNNNLERIPERLDPLSSLKYLDL-----FENNLDRIPEYLRSFPTSIPSEFTSLR--- 607
            LS  N+ ++P  +  LS LK+L L      + +L ++P  +R         F SL    
Sbjct: 742 DLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQGSL-KLPSSVRFLDGH--DSFKSLSWQR 798

Query: 608 -LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTI 666
            L   L NC K +  ++    + GW         +  K +      +P W  +Q+ G+ I
Sbjct: 799 WLWGFLFNCFKSEIQDVE--CRGGWHDIQFGQSGFFGKGISIVIPRMPHWISYQNVGNEI 856

Query: 667 SLKTPQPTGY-NKLMGFAFCVV 687
            ++ P      N  +GFA C V
Sbjct: 857 KIELPMDWYEDNDFLGFALCAV 878



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 19/229 (8%)

Query: 264  LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
            L L+ C R ESLPS     KSLT+     C   +  P+   +++ L  L +DGT+++ELP
Sbjct: 1026 LCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELP 1085

Query: 324  EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----------I 373
              +  L  L  L+L+NC  L  I  +I  L+S+E++ +S CS L   P+          +
Sbjct: 1086 SSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLL 1145

Query: 374  PFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLE-R 425
                +D    +    S L+  K   L+       ++ S + +  SL  +++  C   E  
Sbjct: 1146 CAARLDSMSCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGG 1205

Query: 426  LPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
            +P E+  L +L+ L ++G     +P  + QL+ L  L L  C   + +P
Sbjct: 1206 IPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIP 1254



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 44/266 (16%)

Query: 199  SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ-FLEMP-------SCN 250
            +I+CLS I  L + +CKRLE++ S I+KL+ L +     C  LQ F E+           
Sbjct: 1016 NIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELR 1075

Query: 251  IDGTRSKEQPSS--------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +DGT  KE PSS         L L+ C    ++P   C  +SL +L +  C    +LP  
Sbjct: 1076 LDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKN 1135

Query: 303  LGNLQALNRLI---IDGTAIRELPEGLGQLALLSKLELKNCSELE-YISSSIFKLKSVES 358
            LG+L  L  L    +D  +  +LP     L  L  L L   + +   I S I  L S+E 
Sbjct: 1136 LGSLTQLRLLCAARLDSMSC-QLPS-FSDLRFLKILNLDRSNLVHGAIRSDISILYSLEE 1193

Query: 359  IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKS 411
            +++S            +CN+   G   IPS +  L+       K +   S+PS +     
Sbjct: 1194 VDLS------------YCNLAEGG---IPSEICYLSSLQALYLKGNHFSSIPSGIGQLSK 1238

Query: 412  LTSLEIIDCKKLERLPDELGNLEALE 437
            L  L++  C+ L+++P+   +L  L+
Sbjct: 1239 LKILDLSHCEMLQQIPELPSSLRVLD 1264



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 21/238 (8%)

Query: 130  SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT-SCHLRSTLP 187
            +I+ L+ ++ L L  CK L SLP+ I+  K L      GCS L++ P++T    +   L 
Sbjct: 1016 NIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELR 1075

Query: 188  LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL------ 241
            L G  ++ELPSSI+ L  +  L + +CK L NI  +I  L+ LE++ +  C  L      
Sbjct: 1076 LDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKN 1135

Query: 242  -----QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLE 289
                 Q   + +  +D    +    S+L+  K    +       ++ S   +  SL  ++
Sbjct: 1136 LGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVD 1195

Query: 290  IIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            +  C   E  +P E+  L +L  L + G     +P G+GQL+ L  L+L +C  L+ I
Sbjct: 1196 LSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQI 1253



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            N E  E+L +  T I E+        +  L L+ C   ESLPS +Y  KSLT+     C 
Sbjct: 997  NGEHEEKLCLGETAINELLNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCS 1056

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
                 P+   +++ L+ L + GT+++E+P S+  L  L++L L +  NL  IP+++  L 
Sbjct: 1057 KLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLR 1116

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYL 578
            SL +L +S  + L ++P+ L  L+ L+ L
Sbjct: 1117 SLETLIVSGCSKLNKLPKNLGSLTQLRLL 1145


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 50/312 (16%)

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           LE +   N + LP EL  L  L +L I G  +  +P+ + Q+  L +L L    +L  I 
Sbjct: 61  LEKVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRV-KLTEIP 119

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL-------E 400
            +I KL ++  +++SN                 + I +IP ++ KL   ++L        
Sbjct: 120 DAIAKLTNLTQLDLSN-----------------NQITQIPEAIAKLTNLTQLVLFNNQIT 162

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK 460
            +P ++    +LT   I+   ++ ++P+ + NL  L +L +    I ++P+++A L    
Sbjct: 163 QIPEAIAKLTNLTQF-ILSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLT--- 218

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVP 520
                               +LT L++++ K   ++P+ I NL  L  L +    I ++P
Sbjct: 219 --------------------NLTQLDLLNNK-ITQIPEAIANLINLTQLDLLNNKITQIP 257

Query: 521 ESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           E++ +L++L  L+LSDN +  IPE++ +L++L  L L +N + +IPE +  L++L  LDL
Sbjct: 258 EAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQLDL 317

Query: 581 FENNLDRIPEYL 592
             N + +IPE +
Sbjct: 318 RSNKITQIPEAI 329



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 179/391 (45%), Gaps = 49/391 (12%)

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
           L +L D ++A+    LDL     LTE    I  L +LE L L +          +  +YL
Sbjct: 6   LLQLIDRAVAEGWRELDLS-GQELTELPGEIGKLQQLESLILGKKIEAYEF---VGDRYL 61

Query: 161 KRLVLRGCSNLKNLPK--MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLE 218
           +++     +NLK LP   +   +LR  L + G  +E +P  +  + ++ EL++   K L 
Sbjct: 62  EKV---SGNNLKTLPLELLGLPNLRK-LDISGNPLESIPDVVTQILHLEELILIRVK-LT 116

Query: 219 NISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSG 278
            I  +I KL  L  + +    N Q  ++P        +K    ++L L    +   +P  
Sbjct: 117 EIPDAIAKLTNLTQLDLS---NNQITQIPEA-----IAKLTNLTQLVLFNN-QITQIPEA 167

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
                +LT   I+      ++P+ + NL  L +LI+    I ++PE +  L  L++L+L 
Sbjct: 168 IAKLTNLTQF-ILSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLL 226

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS- 397
           N +++  I  +I  L ++  +++ N                 + I +IP ++ KL   + 
Sbjct: 227 N-NKITQIPEAIANLINLTQLDLLN-----------------NKITQIPEAIAKLTNLTQ 268

Query: 398 ------KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
                 K+  +P ++    +LT L+ +   K+ ++P+ +  L  L +L +    I ++P+
Sbjct: 269 LILSDNKITQIPEAIAKLTNLTQLD-LHSNKITQIPEAIAKLTNLTQLDLRSNKITQIPE 327

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           ++A+L  L++L L   +S  ++P  +  SK 
Sbjct: 328 AIAKLTNLTQLDLSD-NSITNIPLEMLNSKD 357


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 161/317 (50%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 131

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 132 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 184

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 185 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 243

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 244 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 302

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 303 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 362

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 363 NLKYNQLATLPEEIKQL 379



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 176/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 35  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 94

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 95  ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 150

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 151 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 200

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 201 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 255

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 256 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 310

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++ + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 311 QRLQTLYLGN-NQLNFLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 362

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N   +L +LP  +   K+L  L +    +  +K+ER+
Sbjct: 363 NLKYN---QLATLPEEIKQLKNLKKLYLHNNPLPSEKIERI 400



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 100 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 159

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 160 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 215

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 216 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 274

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +  +L++  +   
Sbjct: 275 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRL-QTLY 317

Query: 275 LPSGQCMF-----KSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
           L + Q  F     + L +LE +D  +     LP E+G LQ L  L +    +  LPE + 
Sbjct: 318 LGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 377

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 378 QLKNLKKLYLHN 389



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 24  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 83

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 84  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 121


>gi|195574155|ref|XP_002105055.1| GD21289 [Drosophila simulans]
 gi|194200982|gb|EDX14558.1| GD21289 [Drosophila simulans]
          Length = 2647

 Score =  105 bits (261), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  101 bits (252), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLSNLNVD-RNALEYLPLEIGQ 334



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVS----LTDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  LS L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|297794871|ref|XP_002865320.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311155|gb|EFH41579.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1156

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 238/540 (44%), Gaps = 80/540 (14%)

Query: 279  QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
            Q     ++ L  I  P  ++LP +  N + L  L +  ++I+++ EG+ +   L    L 
Sbjct: 656  QLPLNKVSYLHWIKYP-LDKLPSDF-NPENLVNLELPYSSIKQVWEGVKETPKLKWANLS 713

Query: 339  NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCS 397
              S+L  +   +   K++E + +  C++L   P+          +E + S V L +  C 
Sbjct: 714  YSSKLTNLLG-LSNAKNLERLNLEGCTSLLKLPK---------EMENMESLVFLNMRGCK 763

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
             L  L        SLT L + DC KLE       NLEAL    ++GT I+ +P ++  L 
Sbjct: 764  SLTFLHR--MNLSSLTILILSDCSKLEEFEVISENLEAL---YLDGTAIKGLPPTVRDLK 818

Query: 458  -LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
             L+ L +K C+  ESLP  L   K+L  L + +C     +P  + N++ L++L + GT I
Sbjct: 819  RLAILNMKGCTELESLPECLGKQKALEELILSNCSKLESVPKAVKNMKKLRILLLDGTRI 878

Query: 517  REVPESLGQLSSLEWLVLSDNNLQI-IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSS 574
            +++P    +++SLE L LS N   I + +SL+  S+L  + + N  NL  +P    P  S
Sbjct: 879  KDIP----KINSLERLSLSRNIAMIHLQDSLSGFSNLKCVVMKNCENLRYLPSL--P-RS 931

Query: 575  LKYLDLFE-NNLDRI--PEYLRSFPTSIPSEFTSLRLSVDLRNCLKL--DPNE-LSEIIK 628
            L+YL+++    L+ +  P   R F   I  +   +R +    NC  L  D  E +S   K
Sbjct: 932  LEYLNVYGCERLETVENPLVFRGFFNVI--QLEKIRSTFLFTNCNNLFQDAKESISSYAK 989

Query: 629  DGWMKQSVNGETY---ITKSMYF----PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMG 681
              W    +  + Y   I    +F    PG  +P WF +Q+ GS    +       N L G
Sbjct: 990  --WKCHRLALDCYQLGIVSGAFFNTCYPGFIVPSWFHYQAVGSVFEPRLKSHWCNNMLYG 1047

Query: 682  FAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSY------LGKISHV 735
             A C VV+        HE+   D   + F V C  + E  D     +      L K   +
Sbjct: 1048 IALCAVVSF-------HEN--QDPIIDSFSVKCTLQFENEDGSRIRFDCDIGSLTKPGRI 1098

Query: 736  ESDHVFLGSSIFAGENSCKRSDEFF-------------FHIDRSC-CEVKKCGIHFVHAQ 781
             +DHVF+G         C R  +++             F++   C  EV  CG   ++A+
Sbjct: 1099 GADHVFIGYV------PCSRLKDYYSIPIYHPTYVKVEFYLPDGCKSEVVDCGFRLMYAK 1152



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 157/336 (46%), Gaps = 35/336 (10%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           MS++  E+  +   F +M  +R LK   S     V+  EG    +   F   Q PL  ++
Sbjct: 610 MSEVPEEMIFDAKIF-RMCNIRYLKIYNS-----VYPKEGEGIFKFDRFREFQLPLNKVS 663

Query: 61  ILHW--------------ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD 106
            LHW              ENLV+L++P S + Q+W+ V+    LK  +L YS  LT L  
Sbjct: 664 YLHWIKYPLDKLPSDFNPENLVNLELPYSSIKQVWEGVKETPKLKWANLSYSSKLTNLLG 723

Query: 107 LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
           LS A+NLE L+L  C+SL +    ++ +  L  L++  CKSLT L   ++   L  L+L 
Sbjct: 724 LSNAKNLERLNLEGCTSLLKLPKEMENMESLVFLNMRGCKSLTFL-HRMNLSSLTILILS 782

Query: 167 GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFK 226
            CS L+   ++ S +L + L L G  I+ LP +++ L  +  L +  C  LE++   + K
Sbjct: 783 DCSKLEEF-EVISENLEA-LYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGK 840

Query: 227 LQFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPS----SELKLKKCPRPES 274
            + LE + +  C  L+ +     N        +DGTR K+ P       L L +      
Sbjct: 841 QKALEELILSNCSKLESVPKAVKNMKKLRILLLDGTRIKDIPKINSLERLSLSRNIAMIH 900

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           L      F +L  + + +C N   LP    +L+ LN
Sbjct: 901 LQDSLSGFSNLKCVVMKNCENLRYLPSLPRSLEYLN 936


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 161/317 (50%), Gaps = 30/317 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LPE +GQL  L KL+L   ++L  I   I +L++++ 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYE-NQLTAIPKEIGQLQNLQE 145

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPS---------SVLK-LNKCSKLESL------ 402
           + +++ + L   PE      D   ++R+ +         S+LK + +   LESL      
Sbjct: 146 LNLAH-NQLATLPE------DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQ 198

Query: 403 ----PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLAL 458
               P  +   ++L SL + D  +L  LP E+G L+ L+ L +    +  +PK + QL  
Sbjct: 199 LNVLPKEIGQLRNLESLGL-DHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQN 257

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
            +  L   +   +LP  +   ++L  L++ + +    LP EIG L+ L+ L + G  +  
Sbjct: 258 LQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQ-LTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +PE++GQL  L+ L L +N L  +P  + QL +L SL L +N L  +P+ +  L  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 579 DLFENNLDRIPEYLRSF 595
           +L  N L  +PE ++  
Sbjct: 377 NLKYNQLATLPEEIKQL 393



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 176/401 (43%), Gaps = 74/401 (18%)

Query: 65  ENLVSLKMPGSKVT-----------------------QLWDDVQNLVSLKRIDLKYSKLL 101
           +N+  L + GSK+T                        L  ++  L +L+++ L  ++L+
Sbjct: 49  QNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLM 108

Query: 102 TKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
               ++   QNL+ L L Y + LT     I  L  L+ L+L   + L +LP  I    L+
Sbjct: 109 ALPEEIGQLQNLQKLKL-YENQLTAIPKEIGQLQNLQELNLAHNQ-LATLPEDIEQ--LQ 164

Query: 162 RL------------VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL 209
           RL            +L+    L+NL  +   H +  +         LP  I  L N+ E 
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNV---------LPKEIGQLRNL-ES 214

Query: 210 LIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC 269
           L     +L  +   I +LQ L+ + +    N Q   +P     G     Q     K K  
Sbjct: 215 LGLDHNQLNVLPKEIGQLQNLQILHLR---NNQLTTLPKE--IGQLQNLQKLLLNKNKLT 269

Query: 270 PRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQL 329
             PE +  GQ   ++L  L++ +      LP E+G LQ L  L +DG  +  LPE +GQL
Sbjct: 270 TLPEEI--GQ--LQNLQKLKLYEN-QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 330 ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             L  L L N ++L ++ + + +L+++ES+++ + + L   P+      +   ++++ + 
Sbjct: 325 QRLQTLYLGN-NQLNFLPNKVEQLQNLESLDLEH-NQLNALPK------EIGKLQKLQTL 376

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEI----IDCKKLERL 426
            LK N+ +   +LP  +   K+L  L +    +  +K+ER+
Sbjct: 377 NLKYNQLA---TLPEEIKQLKNLKKLYLHNNPLPSEKIERI 414



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  LK+  +++T +  ++  L +L+ ++L +++L T   D+   Q L+ L LG+
Sbjct: 114 IGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGH 173

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-- 176
            +        I  L  LE L LD  + L  LP  I    L+ L   G   + L  LPK  
Sbjct: 174 -NQFNSILKEIGQLQNLESLGLDHNQ-LNVLPKEIGQ--LRNLESLGLDHNQLNVLPKEI 229

Query: 177 -----MTSCHLR----STLP-------------LLGVGIEELPSSIKCLSNIGELLIYSC 214
                +   HLR    +TLP             L    +  LP  I  L N+ +L +Y  
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE- 288

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            +L  +   I +LQ L+ +                ++DG +    P +  +L++  +   
Sbjct: 289 NQLTTLPKEIGQLQNLQEL----------------DLDGNQLITLPENIGQLQRL-QTLY 331

Query: 275 LPSGQCMF-----KSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLG 327
           L + Q  F     + L +LE +D  +     LP E+G LQ L  L +    +  LPE + 
Sbjct: 332 LGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIK 391

Query: 328 QLALLSKLELKN 339
           QL  L KL L N
Sbjct: 392 QLKNLKKLYLHN 403



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  + + + N + +++L + G+ +  +P  +G+L +L+ L L DN L  +P+ + +L +L
Sbjct: 38  YRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
             L LS N L  +PE +  L +L+ L L+EN L  IP+
Sbjct: 98  QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPK 135


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 45/384 (11%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP+      +L SL + +      LP E+G L  L  L +D   +  LP  +GQL  L 
Sbjct: 444 SLPAEIGQLTNLQSLYLFNN-KLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQ 502

Query: 334 KLELKNCSELEYISSSIFKLKSVESI------------EISNCSNLKGFPEIPFCNIDGS 381
            L L N ++L  + + I +L +++S             EI   +NL+ F       +D +
Sbjct: 503 SLYLFN-NKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLTNLQSF------YLDNT 555

Query: 382 GIERIPSSVLKLNKCSK-------LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
            +  +P+ + +L            L SLP+++    +L SL  +   +L  L  E+G L 
Sbjct: 556 LLSSLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSL-YLSSNQLSILQAEIGQLT 614

Query: 435 ALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            L+ L +    +  +P  + QL   +      +   SLP+ +    +L +L + + K   
Sbjct: 615 NLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNK-LS 673

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
            LP EIG L  L+ L +    +  +P  +GQL++L+ L L +N L  +P  + QL++L S
Sbjct: 674 SLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQS 733

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSE 602
           L L NN L  +P  +  L++L+ L LF N L  +P  +                +S+P+E
Sbjct: 734 LYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAE 793

Query: 603 FTSLRLSVDLRNCLKLDPNELSEI 626
              L    +L+  L LD N+LS +
Sbjct: 794 IGQL---TNLQ-SLYLDNNQLSSL 813



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 190/399 (47%), Gaps = 28/399 (7%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS--CN 250
           +  LP+ I  L+N+  L +++ K L ++ + I +L  L+++ +    N Q   +P+    
Sbjct: 442 LSSLPAEIGQLTNLQSLYLFNNK-LSSLPAEIGQLTNLQTLYLD---NNQLSSLPAEIGQ 497

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           +   +S    +++L         SLP+      +L S  + +      LP E+G L  L 
Sbjct: 498 LTNLQSLYLFNNKLS--------SLPAEIGQLTNLQSFYLYNTL-LSSLPAEIGQLTNLQ 548

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
              +D T +  LP  +GQL  L    L N + L  + ++IF+L +++S+ +S+       
Sbjct: 549 SFYLDNTLLSSLPAEIGQLTNLQSFYLDN-TLLSSLPANIFQLTNLQSLYLSSN------ 601

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            ++     +   +  + S  L  NK S   SLP+ +    +L +L + +  KL  LP E+
Sbjct: 602 -QLSILQAEIGQLTNLQSLYLFNNKLS---SLPAEIGQLTNLQTLYLFN-NKLSSLPAEI 656

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           G L  L+ L +    +  +P  + QL   +      +   SLP+ +    +L +L  +D 
Sbjct: 657 GQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTL-YLDN 715

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                LP EIG L  L+ L +    +  +P  +GQL++L+ L L +N L  +P  + QL+
Sbjct: 716 NQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLT 775

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           +L SL L NN L  +P  +  L++L+ L L  N L  +P
Sbjct: 776 NLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLP 814



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 28/303 (9%)

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI------ 359
           L+ +  L +    +  LP G+GQL  L  L L N ++L  + + I +L +++S+      
Sbjct: 406 LEEVTELDLSANKLTALPPGIGQLTNLQSLYLDN-NQLSSLPAEIGQLTNLQSLYLFNNK 464

Query: 360 ------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSL 406
                 EI   +NL+         +D + +  +P+ + +L          +KL SLP+ +
Sbjct: 465 LSSLPAEIGQLTNLQTL------YLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEI 518

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKC 466
               +L S  + +   L  LP E+G L  L+   ++ T +  +P  + QL   +      
Sbjct: 519 GQLTNLQSFYLYNT-LLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDN 577

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
           +   SLP+ ++   +L SL  +       L  EIG L  L+ L +    +  +P  +GQL
Sbjct: 578 TLLSSLPANIFQLTNLQSL-YLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQL 636

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
           ++L+ L L +N L  +P  + QL++L +L L NN L  +P  +  L++L+ L LF N L 
Sbjct: 637 TNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLS 696

Query: 587 RIP 589
            +P
Sbjct: 697 SLP 699



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 221/536 (41%), Gaps = 116/536 (21%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           E +  L +  +K+T L   +  L +L+ + L  ++L +   ++    NL+ L L + + L
Sbjct: 407 EEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYL-FNNKL 465

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           +   + I  L  L+ L LD  + L+SLP  I               L NL          
Sbjct: 466 SSLPAEIGQLTNLQTLYLDNNQ-LSSLPAEI-------------GQLTNL---------Q 502

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSC---------KRLENISSSIFKLQFLESI-- 233
           +L L    +  LP+ I  L+N+    +Y+           +L N+ S       L S+  
Sbjct: 503 SLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPA 562

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            I +  NLQ     S  +D T     P++  +L            Q ++ S   L I+  
Sbjct: 563 EIGQLTNLQ-----SFYLDNTLLSSLPANIFQLTNL---------QSLYLSSNQLSILQA 608

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
                   E+G L  L  L +    +  LP  +GQL  L  L L N ++L  + + I +L
Sbjct: 609 --------EIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFN-NKLSSLPAEIGQL 659

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLT 413
            +++++ + N                                 +KL SLP+ +    +L 
Sbjct: 660 TNLQTLYLFN---------------------------------NKLSSLPAEIGQLTNLQ 686

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
           +L + +  KL  LP E+G L  L+ L ++   +  +P  + QL                 
Sbjct: 687 TLYLFN-NKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLT---------------- 729

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
                  +L SL + + K    LP EIG L  L+ L +    +  +P  +GQL++L+ L 
Sbjct: 730 -------NLQSLYLFNNK-LSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLY 781

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L +N L  +P  + QL++L SL L NN L  +P  +  L++L+ L L  N L+ +P
Sbjct: 782 LDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQLNSLP 837



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 202/463 (43%), Gaps = 57/463 (12%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
           NL SL +  ++++ L  ++  L +L+ + L  +KL +   ++    NL+ L L   + L+
Sbjct: 431 NLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLD-NNQLS 489

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLP------TSIHSKYLKRLVLRGC-SNLKNLPKMT 178
              + I  L  L+ L L   K L+SLP      T++ S YL   +L    + +  L  + 
Sbjct: 490 SLPAEIGQLTNLQSLYLFNNK-LSSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLTNLQ 548

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI----- 233
           S +L +TL      +  LP+ I  L+N+    +     L ++ ++IF+L  L+S+     
Sbjct: 549 SFYLDNTL------LSSLPAEIGQLTNLQSFYL-DNTLLSSLPANIFQLTNLQSLYLSSN 601

Query: 234 -------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC--PRPESLPSGQCMFKS 284
                   I +  NLQ L + +  +    ++    + L+       +  SLP+      +
Sbjct: 602 QLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTN 661

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           L +L + +      LP E+G L  L  L +    +  LP  +GQL  L  L L N ++L 
Sbjct: 662 LQTLYLFNN-KLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDN-NQLS 719

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------S 397
            + + I +L +++S+ + N                 + +  +P+ + +L          +
Sbjct: 720 SLPAEIGQLTNLQSLYLFN-----------------NKLSSLPAEIGQLTNLQSLYLFNN 762

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
           +L SLP+ +    +L SL  +D  +L  LP E+G L  L+ L ++   +  +P  + QL 
Sbjct: 763 QLSSLPAEIGQLTNLQSL-YLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLT 821

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
             +      +   SLP+ +    S     ++D      LP EI
Sbjct: 822 NLQTLYLDNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEI 864



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 4/154 (2%)

Query: 436 LEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR 495
           LE+    G G    P+SL ++    L   K ++   LP  +    +L SL  +D      
Sbjct: 389 LEQGGSNGYGEYIAPQSLEEVTELDLSANKLTA---LPPGIGQLTNLQSL-YLDNNQLSS 444

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L  L+ L +    +  +P  +GQL++L+ L L +N L  +P  + QL++L SL
Sbjct: 445 LPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSL 504

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            L NN L  +P  +  L++L+   L+   L  +P
Sbjct: 505 YLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLP 538


>gi|242047708|ref|XP_002461600.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
 gi|241924977|gb|EER98121.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
          Length = 1100

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 380 GSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
           G GI  IP+ + +L          +K+  LP+ +   K L +L++ + +++  LP E+G 
Sbjct: 624 GDGIIEIPADIGRLKYLDTLEVTATKITRLPAEIGDLKQLKTLDVSENREITELPKEIGK 683

Query: 433 LEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           L+ L+ L +  TGIRE+PK + +L   +      +    LP  +   + L +L++     
Sbjct: 684 LQHLKTLDMSCTGIRELPKEIGKLQHLETLDISGTWISELPKEIGNLQHLVTLDVKGTTG 743

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
              LP EI NL+ L  L +  T I ++P  +G+L  LE L L+  NL  +P  ++ L  L
Sbjct: 744 IKELPPEISNLQRLAYLDLSYTQITKMPRDIGKLQHLETLNLTSTNLTELPREISNLKWL 803

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           V L L    + ++P  +  L  L+YLDL    + +IP
Sbjct: 804 VYLNLYGTAITKVPRDIGKLQHLEYLDLGNTKVRKIP 840



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 38/260 (14%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P ++G L+ L+ L +  T I  LP  +G L  L  L++    E+  +   I KL+ +++
Sbjct: 630 IPADIGRLKYLDTLEVTATKITRLPAEIGDLKQLKTLDVSENREITELPKEIGKLQHLKT 689

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +++S                                 C+ +  LP  +   + L +L+I 
Sbjct: 690 LDMS---------------------------------CTGIRELPKEIGKLQHLETLDI- 715

Query: 419 DCKKLERLPDELGNLEALEELRVEGT-GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
               +  LP E+GNL+ L  L V+GT GI+E+P  ++ L  L+ L L   +    +P  +
Sbjct: 716 SGTWISELPKEIGNLQHLVTLDVKGTTGIKELPPEISNLQRLAYLDLS-YTQITKMPRDI 774

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              + L +L +    N   LP EI NL++L  L + GTAI +VP  +G+L  LE+L L +
Sbjct: 775 GKLQHLETLNLTST-NLTELPREISNLKWLVYLNLYGTAITKVPRDIGKLQHLEYLDLGN 833

Query: 537 NNLQIIPESLNQLSSLVSLK 556
             ++ IP  +  L +L  LK
Sbjct: 834 TKVRKIPREIGGLQNLKYLK 853



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 22/228 (9%)

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
            +E+P+   D  R K   + E+   K  R   LP+     K L +L++ +      LP E
Sbjct: 627 IIEIPA---DIGRLKYLDTLEVTATKITR---LPAEIGDLKQLKTLDVSENREITELPKE 680

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G LQ L  L +  T IRELP+ +G+L  L  L++   + +  +   I  L+ + ++++ 
Sbjct: 681 IGKLQHLKTLDMSCTGIRELPKEIGKLQHLETLDISG-TWISELPKEIGNLQHLVTLDVK 739

Query: 363 NCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNK-------CSKLESLPSSLCM 408
             + +K  P        + + ++  + I ++P  + KL          + L  LP  +  
Sbjct: 740 GTTGIKELPPEISNLQRLAYLDLSYTQITKMPRDIGKLQHLETLNLTSTNLTELPREISN 799

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            K L  L +     + ++P ++G L+ LE L +  T +R++P+ +  L
Sbjct: 800 LKWLVYLNLYGT-AITKVPRDIGKLQHLEYLDLGNTKVRKIPREIGGL 846



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 53/281 (18%)

Query: 106 DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLV 164
           D+   + L+ L++   + +T   + I  L +L+ LD+   + +T LP  I   ++LK L 
Sbjct: 633 DIGRLKYLDTLEV-TATKITRLPAEIGDLKQLKTLDVSENREITELPKEIGKLQHLKTLD 691

Query: 165 LRGCSNLKNLPKMTS--CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
           +  C+ ++ LPK      HL  TL + G  I ELP  I  L ++  L +     ++ +  
Sbjct: 692 M-SCTGIRELPKEIGKLQHL-ETLDISGTWISELPKEIGNLQHLVTLDVKGTTGIKELPP 749

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            I  LQ            L +L++               S  ++ K PR           
Sbjct: 750 EISNLQ-----------RLAYLDL---------------SYTQITKMPRD---------I 774

Query: 283 KSLTSLEIID--CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
             L  LE ++    N   LP E+ NL+ L  L + GTAI ++P  +G+L  L  L+L N 
Sbjct: 775 GKLQHLETLNLTSTNLTELPREISNLKWLVYLNLYGTAITKVPRDIGKLQHLEYLDLGN- 833

Query: 341 SELEYISSSIFKLK---------SVESIEISNCSNLKGFPE 372
           +++  I   I  L+          ++ IE +    L+G P+
Sbjct: 834 TKVRKIPREIGGLQNLKYLKDDVGMQPIEAAQLPKLEGLPK 874


>gi|255077272|ref|XP_002502281.1| predicted protein [Micromonas sp. RCC299]
 gi|226517546|gb|ACO63539.1| predicted protein [Micromonas sp. RCC299]
          Length = 228

 Score =  105 bits (261), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 4/206 (1%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L+L +C    ++P+ +    SL  LE+ D  +L  LP E+G L +LEEL ++   +  VP
Sbjct: 9   LELQECGLTGAVPAEIGQLTSLVRLEL-DGNQLTSLPAEIGQLTSLEELYLDENQLTSVP 67

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           + + QL +L +L L   +   S+P+ +    SL +L + D      +P EIG L  L VL
Sbjct: 68  EEIWQLTSLVRLDLDG-NLLTSVPAEIGQLTSLETLLLYD-NQLTSVPAEIGQLTSLTVL 125

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            + G  +  +P  +GQL SL+ L L+ N L  +P  + QL+S+  L L  N L  +P  +
Sbjct: 126 GLDGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSVPAEI 185

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSF 595
             L+SL  LDL  N L R+P  +R  
Sbjct: 186 GQLTSLVDLDLGRNKLTRVPAAIREL 211



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 13/208 (6%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLE 424
           E+  C + G+    +P+ + +L    +LE       SLP+ +    SL  L  +D  +L 
Sbjct: 10  ELQECGLTGA----VPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEEL-YLDENQLT 64

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTS 484
            +P+E+  L +L  L ++G  +  VP  + QL   +  L   +   S+P+ +    SLT 
Sbjct: 65  SVPEEIWQLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTV 124

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPE 544
           L + D      LP EIG L  LK L + G  +  +P  +GQL+S+E L L  N L  +P 
Sbjct: 125 LGL-DGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSVPA 183

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPL 572
            + QL+SLV L L  N L R+P  +  L
Sbjct: 184 EIGQLTSLVDLDLGRNKLTRVPAAIREL 211



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 24/173 (13%)

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           +  LE+ +C     +P EIG L  L  L + G  +  +P  +GQL+SLE L L +N L  
Sbjct: 6   VVKLELQECGLTGAVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTS 65

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPS 601
           +PE + QL+SLV L L  N L  +P  +  L+SL+ L L++N L           TS+P+
Sbjct: 66  VPEEIWQLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQL-----------TSVPA 114

Query: 602 EFTSL-RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEI 653
           E   L  L+V     L LD N+L+ +  +        G+    K +Y  GN++
Sbjct: 115 EIGQLTSLTV-----LGLDGNQLTSLPAE-------IGQLVSLKELYLNGNQL 155



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 50/249 (20%)

Query: 285 LTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
           +  LE+ +C     +P E+G L +L RL +DG  +  LP  +GQL  L +L L   ++L 
Sbjct: 6   VVKLELQECGLTGAVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDE-NQLT 64

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------S 397
            +   I++L S+  ++                 +DG+ +  +P+ + +L          +
Sbjct: 65  SVPEEIWQLTSLVRLD-----------------LDGNLLTSVPAEIGQLTSLETLLLYDN 107

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA 457
           +L S+P+ +    SLT L  +D  +L  LP E+G L +L+EL + G  +  +P  + QL 
Sbjct: 108 QLTSVPAEIGQLTSLTVLG-LDGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQL- 165

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
                    +S E L               +D      +P EIG L  L  L +    + 
Sbjct: 166 ---------TSMEGLG--------------LDGNQLTSVPAEIGQLTSLVDLDLGRNKLT 202

Query: 518 EVPESLGQL 526
            VP ++ +L
Sbjct: 203 RVPAAIREL 211



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L+L++C    ++P+      SL  LE+ D      LP E+G L +L  L +D   +  +
Sbjct: 8   KLELQECGLTGAVPAEIGQLTSLVRLEL-DGNQLTSLPAEIGQLTSLEELYLDENQLTSV 66

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP-------EIPF 375
           PE + QL  L +L+L   + L  + + I +L S+E++ + + + L   P        +  
Sbjct: 67  PEEIWQLTSLVRLDLDG-NLLTSVPAEIGQLTSLETLLLYD-NQLTSVPAEIGQLTSLTV 124

Query: 376 CNIDGSGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
             +DG+ +  +P+ +        L LN  ++L SLP+ +    S+  L + D  +L  +P
Sbjct: 125 LGLDGNQLTSLPAEIGQLVSLKELYLNG-NQLTSLPAEIGQLTSMEGLGL-DGNQLTSVP 182

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLALS 459
            E+G L +L +L +    +  VP ++ +L ++
Sbjct: 183 AEIGQLTSLVDLDLGRNKLTRVPAAIRELRVA 214


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+G L AL  L ++   +R +P  +GQL  L  L+L + ++L  + + I +L S+  
Sbjct: 20  VPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDL-HANQLTSVPAEIGQLTSLVR 78

Query: 359 IEISNCSNLKGFP-EI-PFCNIDGSGIER-----IPSSVLKLNKCS-------KLESLPS 404
           +++   + L   P EI    ++ G  + R     +P+ + +L   +       +L S+P+
Sbjct: 79  LDLQ-VNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPA 137

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
            +    SL  L  I   +L  +P E+G L +L EL + G  +  VP  + QL +L KL L
Sbjct: 138 EIGQLTSLAHL-YISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDL 196

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +   SLP+ +    SLT L +        +P EIG L  L  L +    +  VP  +
Sbjct: 197 A-GNQLTSLPAEIGQLMSLTELNL-HANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEI 254

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL+SLE L L +N L+ +   + QL+SL  L L +N L  +P  +  L+SL  L L  N
Sbjct: 255 GQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGN 314

Query: 584 NLDRIP 589
            L  +P
Sbjct: 315 QLTSLP 320



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 159/322 (49%), Gaps = 19/322 (5%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
           +EL+L       ++P+      +L  L + D      +P E+G L +L  L +    +  
Sbjct: 7   NELELDGLGLTGAVPAEVGRLSALRVLYLNDN-QLRNVPAEIGQLTSLVTLDLHANQLTS 65

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI------PF 375
           +P  +GQL  L +L+L+  ++L  + + I +L S+  + +S    L    EI        
Sbjct: 66  VPAEIGQLTSLVRLDLQ-VNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAH 124

Query: 376 CNIDGSGIERIPSSVLKLNKCS-------KLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +  + +  +P+ + +L   +       +L S+P+ +    SLT L  ++  KL  +P 
Sbjct: 125 LYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTEL-YLNGNKLTSVPA 183

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           E+G L +LE+L + G  +  +P  + QL +L++L L   +   S+P+ +    SLT L  
Sbjct: 184 EIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLH-ANQLTSVPAEIGQLTSLTEL-Y 241

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
           ++      +P EIG L  L+ L +    +R V   +GQL+SL+WL L DN L  +P  + 
Sbjct: 242 LNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIG 301

Query: 548 QLSSLVSLKLSNNNLERIPERL 569
           QL+SL+ L L+ N L  +P  +
Sbjct: 302 QLTSLMMLHLNGNQLTSLPAEI 323



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 20/249 (8%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L+L+      ++P+ +    +L  L + D  +L  +P E+G L +L  L +    +  VP
Sbjct: 9   LELDGLGLTGAVPAEVGRLSALRVLYLND-NQLRNVPAEIGQLTSLVTLDLHANQLTSVP 67

Query: 451 KSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             + QL +L +L L+  +   S+P+ +    SL  L  +     + +P EIG L  L  L
Sbjct: 68  AEIGQLTSLVRLDLQ-VNQLTSVPAEIGQLTSLAGL-FLSRNQLLSVPAEIGQLTSLAHL 125

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
            +    +  VP  +GQL+SL  L +S+N L  +P  + QL+SL  L L+ N L  +P  +
Sbjct: 126 YLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEI 185

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLK 617
             L+SL+ LDL  N L  +P  +                TS+P+E   L    +L     
Sbjct: 186 GQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELY---- 241

Query: 618 LDPNELSEI 626
           L+ N+L+ +
Sbjct: 242 LNANQLTSV 250


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 26/321 (8%)

Query: 282 FKSLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            + L +L+++D        LP E+G LQ L  L +    +   P+ +G+L  L  L L +
Sbjct: 92  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-S 150

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++++ I   I KL+ ++S+ + N + L   P+       + + N+  + I+ +P  + K
Sbjct: 151 ANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEK 209

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   + L SL + D  +L  LP E+G L+ L+ L +    
Sbjct: 210 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQ 268

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGN 502
           +  +P+ +  L  L  L L   +   ++P  +     L +L+++D  N     LP EIG 
Sbjct: 269 LTTIPQEIGHLQNLQDLYLV-SNQLTTIPKEI---GQLQNLQMLDLGNNQLTILPKEIGK 324

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L+ L+ L +    +  +P+ +GQL +L+ L LS+N L  IP+ + QL +L  L LSNN L
Sbjct: 325 LQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 384

Query: 563 ERIPERLDPLSSLKYLDLFEN 583
             IP+ +  L +L+ L L  N
Sbjct: 385 ITIPKEIGQLQNLQTLYLRNN 405



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 181/392 (46%), Gaps = 59/392 (15%)

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           E P    D T++ + P        SE KLK  P+             L +L+++D  + +
Sbjct: 11  EEPGTYQDLTKALQNPLDVRVLDLSEQKLKALPKK---------IGQLKNLQMLDLSDNQ 61

Query: 298 R--LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              LP E+  L+ L  L +    +  LP+ + QL  L  L+L+  ++L  +   I KL++
Sbjct: 62  LIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLR-SNQLTILPKEIGKLQN 120

Query: 356 VESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           ++ + +SN + L  FP+       + + N+  + I+ IP  + KL K   L  LP++   
Sbjct: 121 LQELYLSN-NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL-YLPNN--- 175

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCS 467
                        +L  LP E+G L+ L+ L +    I+ +P+ + +L  L  L L K +
Sbjct: 176 -------------QLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHK-N 221

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
              +LP  +   + L SL + D      LP EIG L+ LKVL +    +  +P+ +G L 
Sbjct: 222 QLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 280

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
           +L+ L L  N L  IP+ + QL +L  L L NN L  +P+ +  L +L+ L L  N L  
Sbjct: 281 NLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTT 340

Query: 588 IPEYLRSFP------------TSIPSEFTSLR 607
           IP+ +                T+IP E   L+
Sbjct: 341 IPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 24/225 (10%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVS 479
           +KL+ LP ++G L+ L+ L +    +  +PK + QL  L  L L   +    LP  +   
Sbjct: 37  QKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSD-NQLIILPKEI--- 92

Query: 480 KSLTSLEIIDCK--NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
           + L +L+++D +      LP EIG L+ L+ L +    +   P+ +G+L  L+WL LS N
Sbjct: 93  RQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSAN 152

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP- 596
            ++ IP+ + +L  L SL L NN L  +P+ +  L  L++L+L  N +  +P+ +     
Sbjct: 153 QIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQK 212

Query: 597 -----------TSIPSEFTSLR----LSVDLRNCLKLDPNELSEI 626
                      T++P E   L+    L +D  N L   P E+ ++
Sbjct: 213 LQWLYLHKNQLTTLPQEIEKLQKLESLGLD-NNQLTTLPQEIGQL 256



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 203/483 (42%), Gaps = 100/483 (20%)

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
           PG+    L   +QN + ++ +DL   KL      +   +NL++LDL   + L      I+
Sbjct: 13  PGT-YQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLS-DNQLIILPKEIR 70

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
            L  L++LDL   + L  LP  I               LKNL  +    LRS        
Sbjct: 71  QLKNLQMLDLSDNQ-LIILPKEIRQ-------------LKNLQML---DLRSN------Q 107

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +  LP  I  L N+ EL + S  +L      I KLQ L+ +                N+ 
Sbjct: 108 LTILPKEIGKLQNLQELYL-SNNQLTTFPKEIGKLQKLQWL----------------NLS 150

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             + K  P    KL+K  +   LP+ Q     LT+           LP E+G LQ L  L
Sbjct: 151 ANQIKTIPKEIEKLQKL-QSLYLPNNQ-----LTT-----------LPQEIGKLQKLQWL 193

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            +    I+ LP+ + +L  L  L L + ++L  +   I KL+ +ES+ + N + L   P+
Sbjct: 194 NLSYNQIKTLPQEIEKLQKLQWLYL-HKNQLTTLPQEIEKLQKLESLGLDN-NQLTTLPQ 251

Query: 373 -------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEII 418
                  +    ++ + +  IP  +  L          ++L ++P  +   ++L  L+ +
Sbjct: 252 EIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLD-L 310

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
              +L  LP E+G L+ L+EL +    +  +PK + QL             ++L   LY+
Sbjct: 311 GNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL-------------QNL-QELYL 356

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
           S +              +P EIG L+ L+ L +    +  +P+ +GQL +L+ L L +N 
Sbjct: 357 SNN----------QLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQ 406

Query: 539 LQI 541
             I
Sbjct: 407 FSI 409



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 181/423 (42%), Gaps = 65/423 (15%)

Query: 45  ELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           ++R  +  +  LK L   I   +NL  L +  +++  L  +++ L +L+ +DL  ++L+ 
Sbjct: 28  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLII 87

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
              ++   +NL++LDL   + LT     I  L  L+ L L   + LT+ P  I      +
Sbjct: 88  LPKEIRQLKNLQMLDL-RSNQLTILPKEIGKLQNLQELYLSNNQ-LTTFPKEIGKLQKLQ 145

Query: 163 LVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            +    + +K +PK +       +L L    +  LP  I  L  + + L  S  +++ + 
Sbjct: 146 WLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL-QWLNLSYNQIKTLP 204

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
             I KLQ L+ + +H+    Q   +P                 +++K  + ESL      
Sbjct: 205 QEIEKLQKLQWLYLHKN---QLTTLPQ----------------EIEKLQKLESLG----- 240

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
                    +D      LP E+G LQ L  L ++   +  +P+ +G L  L  L L   +
Sbjct: 241 ---------LDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLV-SN 290

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
           +L  I   I +L++++ +++ N                 + +  +P  + KL        
Sbjct: 291 QLTTIPKEIGQLQNLQMLDLGN-----------------NQLTILPKEIGKLQNLQELYL 333

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             ++L ++P  +   ++L  L  +   +L  +P E+G L+ L+EL +    +  +PK + 
Sbjct: 334 SNNQLTTIPKEIGQLQNLQEL-YLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIG 392

Query: 455 QLA 457
           QL 
Sbjct: 393 QLQ 395


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 239/509 (46%), Gaps = 78/509 (15%)

Query: 80  LW---DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNK 136
           LW    ++  L +L+ +DL  ++L+T   ++   QNL+ LDL + + LT     I  L  
Sbjct: 24  LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSH-NQLTTLPKEIGQLQN 82

Query: 137 LEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL 196
           L+ L+L+    LT+L   I              NL+NL          TL L    +  L
Sbjct: 83  LQKLNLN-SNQLTTLSKEI-------------GNLQNL---------QTLDLGRNQLTTL 119

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRS 256
           P  I  L N+ + L     +L  +   I+ LQ L+++ + R                   
Sbjct: 120 PEEIWNLQNL-QTLDLGRNQLTTLPEEIWNLQNLQTLDLGRN------------------ 160

Query: 257 KEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG 316
                         +  +LP      ++L +L++ +      LP+E+GNLQ L  L ++G
Sbjct: 161 --------------QLTTLPEEIGNLQNLQTLDL-EGNQLATLPEEIGNLQNLQTLDLEG 205

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
             +  LP+ +G+L  L KL L N + L  +   + KL++++ + + N + L   P+    
Sbjct: 206 NQLTTLPKEIGKLQNLKKLYLYN-NRLTTLPKEVGKLQNLQELYLYN-NRLTTLPK---- 259

Query: 377 NIDGSGIERIPS-SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
                 IE + +  +L L   ++L +LP  +   ++L  L + +  +L  LP E+GNL+ 
Sbjct: 260 -----EIEDLQNLKILSLG-SNQLTTLPKEVGKLQNLQELYLYN-NRLTTLPKEIGNLQN 312

Query: 436 LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
           L++L +       +PK +  L  L KL L + +   +LP  ++  ++L +L++ +     
Sbjct: 313 LQDLNLNSNQFTTLPKEIWNLQKLQKLSLGR-NQLTTLPEEIWNLQNLKTLDL-EGNQLA 370

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
            LP+EIGNL+ L+ L ++G  +  +P+ +G+L  L+ L L +N L  +P  +  L  L +
Sbjct: 371 TLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQT 430

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           L L +N L  +P+ +  L  LK LDL  N
Sbjct: 431 LSLGHNQLTTLPKEIGNLQKLKMLDLGGN 459



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 214/508 (42%), Gaps = 83/508 (16%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NILHWENLVS 69
           P    K+  LR L    S N+ M    E      L+  +     L TL   I   +NL  
Sbjct: 28  PKEIGKLQNLRDLDL--SSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQK 85

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L +  +++T L  ++ NL +L+ +DL  ++L T   ++   QNL+ LDLG  + LT    
Sbjct: 86  LNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGR-NQLTTLPE 144

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLP-KMTSCHLRSTLP 187
            I  L  L+ LDL R + LT+LP  I + + L+ L L G + L  LP ++ +     TL 
Sbjct: 145 EIWNLQNLQTLDLGRNQ-LTTLPEEIGNLQNLQTLDLEG-NQLATLPEEIGNLQNLQTLD 202

Query: 188 LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMP 247
           L G  +  LP  I  L N+ +L +Y+  RL  +   + KLQ L+ + ++           
Sbjct: 203 LEGNQLTTLPKEIGKLQNLKKLYLYN-NRLTTLPKEVGKLQNLQELYLYNN--------- 252

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP--NFERLPDELGN 305
                            +L   P+           + L +L+I+         LP E+G 
Sbjct: 253 -----------------RLTTLPKE---------IEDLQNLKILSLGSNQLTTLPKEVGK 286

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           LQ L  L +    +  LP+ +G L  L  L L N ++   +   I+ L+ ++ + +    
Sbjct: 287 LQNLQELYLYNNRLTTLPKEIGNLQNLQDLNL-NSNQFTTLPKEIWNLQKLQKLSLGRNQ 345

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
                            +  +P  +  L     L+                 ++  +L  
Sbjct: 346 -----------------LTTLPEEIWNLQNLKTLD-----------------LEGNQLAT 371

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           LP+E+GNL+ L++L +EG  +  +PK + +L   K      +   +LP  +   + L +L
Sbjct: 372 LPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTL 431

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
             +       LP EIGNL+ LK+L + G
Sbjct: 432 S-LGHNQLTTLPKEIGNLQKLKMLDLGG 458



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 164/350 (46%), Gaps = 75/350 (21%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ L +L +    +  LP+ +GQL  L KL L N ++L  +S  I  L+++++
Sbjct: 50  LPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNL-NSNQLTTLSKEIGNLQNLQT 108

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +++   + L   PE    N+            L L + ++L +LP  +   ++L +L++ 
Sbjct: 109 LDLG-RNQLTTLPE-EIWNLQNL-------QTLDLGR-NQLTTLPEEIWNLQNLQTLDL- 157

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
              +L  LP+E+GNL+ L+ L +EG           QLA                     
Sbjct: 158 GRNQLTTLPEEIGNLQNLQTLDLEGN----------QLA--------------------- 186

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
                            LP+EIGNL+ L+ L ++G  +  +P+ +G+L +L+ L L +N 
Sbjct: 187 ----------------TLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNR 230

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP-- 596
           L  +P+ + +L +L  L L NN L  +P+ ++ L +LK L L  N L  +P+ +      
Sbjct: 231 LTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNL 290

Query: 597 ----------TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSV 636
                     T++P E  +L+   DL     L+ N+ + + K+ W  Q +
Sbjct: 291 QELYLYNNRLTTLPKEIGNLQNLQDLN----LNSNQFTTLPKEIWNLQKL 336


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 244/554 (44%), Gaps = 85/554 (15%)

Query: 269 CPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
           C   + LP+     KSL  L++     FE+ P+ +G L++L  L + G  +  LP  +G 
Sbjct: 124 CNELKLLPAKMVELKSLQKLDLWKN-RFEKFPNVVGELKSLQELDLSGNKLESLPAVIGN 182

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISN---------CSNLKGFPEIPFCNID 379
           L  L  L+L   S L+ + + I KLKS++ + + N           NL    E+   ++D
Sbjct: 183 LINLQDLDLHENS-LKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQEL---DLD 238

Query: 380 GSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            + ++ +P ++ +L          ++ ESLP+ +   ++L  L   D  KL+ LP E+G 
Sbjct: 239 HNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNF-DDNKLKLLPVEIGE 297

Query: 433 LEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
           L+ L++L + G  ++ +P ++  L  L +L L   +  ESLP+                 
Sbjct: 298 LKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLS-GNELESLPAV---------------- 340

Query: 492 NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSS 551
                   IGNL  L+ L +    ++ +P+++G+L +L  L L  + L+I+P ++ +L +
Sbjct: 341 --------IGNLVNLQYLNLDHNKLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGELEN 392

Query: 552 LVSLKLSNNNLERIPERLDPLS-SLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
           L  L LS N LE +P  ++ LS SL+ L+L  NN+  + +  R+            R+ +
Sbjct: 393 LQKLHLSGNKLETLPIEIEKLSGSLRLLNLRGNNISEVGDGERTVGWRELRAIFGDRVML 452

Query: 611 DLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKT 670
           D  + ++ + +E+S  ++D + +         +K M++   E+ K  R QS       + 
Sbjct: 453 D-NDSVEYEEDEIS--VEDVYRELK-------SKPMHW-NFEMLKTLRPQSVPEFRCSEE 501

Query: 671 PQPTGYNKLMGF-------------------AFCVVVACSVSECCRHESVEDDRKCNLFD 711
                +N+ M                         V     S   R +   + R  N+ +
Sbjct: 502 ELMGLWNENMFVREWDRLRPEVIETIEANRRVLLAVYGEDFSRLLRTDVDGETRNRNITE 561

Query: 712 VVCDRRSEGYDSYT-----SSYLGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRS 766
           +V  + +E  DS+T     S   G   +V  D     S +F   ++ +  DEF  HI   
Sbjct: 562 IVT-KIAENKDSHTRERNISKLTGNDKNVFKDMWEKNSHMFIMGDNKRTMDEFIHHIYNP 620

Query: 767 CCEVKKCGIHFVHA 780
             E ++ G+   H 
Sbjct: 621 DQEYRRWGMKKKHT 634



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 165/318 (51%), Gaps = 43/318 (13%)

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
           ++   N E LP  +  L+ L  L ++   ++ LP+ +G+L  L +L L +C+EL+ + + 
Sbjct: 75  VLSNNNLETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCL-SCNELKLLPAK 133

Query: 350 IFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPSSV--------LKLN 394
           + +LKS++ +++   +  + FP +          ++ G+ +E +P+ +        L L+
Sbjct: 134 MVELKSLQKLDLWK-NRFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLDLH 192

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
           + S L++LP+ +   KSL  L + +  + E LP  +GNL  L+EL ++   ++ +P ++ 
Sbjct: 193 ENS-LKTLPTEIEKLKSLQKLNLQN-NRFESLPAVIGNLTNLQELDLDHNKLKTLPDTIG 250

Query: 455 QLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
           +L   ++     + FESLP+++   ++L  L   D K              LK+L     
Sbjct: 251 ELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNK--------------LKLL----- 291

Query: 515 AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
                P  +G+L +L+ L LS NNL+ +P+++  L  L  L LS N LE +P  +  L +
Sbjct: 292 -----PVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVN 346

Query: 575 LKYLDLFENNLDRIPEYL 592
           L+YL+L  N L  +P+ +
Sbjct: 347 LQYLNLDHNKLKTLPDTI 364



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 33/235 (14%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           + LE+LP  +   ++L  L  ++  +L+ LPDE+G L +L+EL                 
Sbjct: 79  NNLETLPPVMEELENLKVL-FLNVNRLKLLPDEIGKLVSLQEL----------------- 120

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
            LS      C+  + LP+++   KSL  L++   + F + P+ +G L+ L+ L + G  +
Sbjct: 121 CLS------CNELKLLPAKMVELKSLQKLDLWKNR-FEKFPNVVGELKSLQELDLSGNKL 173

Query: 517 REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLK 576
             +P  +G L +L+ L L +N+L+ +P  + +L SL  L L NN  E +P  +  L++L+
Sbjct: 174 ESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQ 233

Query: 577 YLDLFENNLDRIPEYLRSFP-----TSIPSEFTSLRLSV-DLRNC--LKLDPNEL 623
            LDL  N L  +P+ +         + I +EF SL   V +LRN   L  D N+L
Sbjct: 234 ELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKL 288



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 176/397 (44%), Gaps = 74/397 (18%)

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           ENL  L +  +++  L D++  LVSL+ + L  ++L      +   ++L+ LDL + +  
Sbjct: 92  ENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDL-WKNRF 150

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-KMTSCHL 182
            +  + +  L  L+ LDL   K L SLP  I +   L+ L L   S LK LP ++     
Sbjct: 151 EKFPNVVGELKSLQELDLSGNK-LESLPAVIGNLINLQDLDLHENS-LKTLPTEIEKLKS 208

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L     E LP+ I  L+N+ EL +   K L+ +  +I +L+    +RI    + +
Sbjct: 209 LQKLNLQNNRFESLPAVIGNLTNLQELDLDHNK-LKTLPDTIGELK---DLRILSFIHNE 264

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
           F                             ESLP+     ++L  L   D    + LP E
Sbjct: 265 F-----------------------------ESLPTKVIELRNLRELN-FDDNKLKLLPVE 294

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G L+ L +L + G  ++ LP+ +G L  L +L L + +ELE + +            I 
Sbjct: 295 IGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSL-SGNELESLPAV-----------IG 342

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           N  NL+      + N+D                 +KL++LP ++   K+L  L  +   K
Sbjct: 343 NLVNLQ------YLNLD----------------HNKLKTLPDTIGELKNLRKL-YLGGSK 379

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
           LE LP  +G LE L++L + G  +  +P  + +L+ S
Sbjct: 380 LEILPVAIGELENLQKLHLSGNKLETLPIEIEKLSGS 416


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 39/318 (12%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           + P G   F++L  L++ +    + LP E+G LQ L +L +    + ELP+ +GQL  L 
Sbjct: 62  TFPKGIEKFQNLKHLDLSNN-QLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNLE 120

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           +L L + + L  +   I +LK +E++ +                                
Sbjct: 121 QLNL-SGNRLTTLPQEIGQLKKLETLHVY------------------------------- 148

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
              ++L  LP  +   ++L  L I+    L  LP+E+G L+  E+L +    +  +P+ L
Sbjct: 149 --YNRLTILPKEIGQLQNLEEL-ILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGL 205

Query: 454 AQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
            +L  L ++ L + +   SLP  +   + L +L +   +    LP+EIG L+ L+ L++K
Sbjct: 206 CKLQNLEQIYLHQ-NRLTSLPKEIGQLRKLWTLYLYSNE-LTTLPEEIGQLQNLRQLSLK 263

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPL 572
              +  +P+ +GQL +L+ L LSDN L +IP+ + QL +L  L LS N+L  +P+ +  L
Sbjct: 264 LNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQL 323

Query: 573 SSLKYLDLFENNLDRIPE 590
            +LK LDL  N+L  +P+
Sbjct: 324 QNLKLLDLSGNSLTTLPK 341



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 13/153 (8%)

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
           +  ++LP  +   ++L  L +    N + LP EIG L+ L+ L + G  +  +P+ +GQL
Sbjct: 81  NQLKALPKEIGQLQNLQKLNV-SVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQL 139

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
             LE L +  N L I+P+ + QL +L  L L  N+L  +PE +  L   + L L +N L 
Sbjct: 140 KKLETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLT 199

Query: 587 RIPEYL------------RSFPTSIPSEFTSLR 607
            +P+ L            ++  TS+P E   LR
Sbjct: 200 TLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLR 232



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 60/335 (17%)

Query: 197 PSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI---------HRCPNLQFLEMP 247
           P  I+   N+  L + S  +L+ +   I +LQ L+ + +              LQ LE  
Sbjct: 64  PKGIEKFQNLKHLDL-SNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNLE-- 120

Query: 248 SCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQ 307
             N+ G R    P    +LKK      L +    +  LT L           P E+G LQ
Sbjct: 121 QLNLSGNRLTTLPQEIGQLKK------LETLHVYYNRLTIL-----------PKEIGQLQ 163

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            L  LI+ G ++  LPE +GQL    KL L + ++L  +   + KL+++E I +      
Sbjct: 164 NLEELILYGNSLTSLPEEIGQLQKFEKLYLHD-NQLTTLPQGLCKLQNLEQIYLHQ---- 218

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDC 420
                        + +  +P  + +L K        ++L +LP  +   ++L  L +   
Sbjct: 219 -------------NRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSL-KL 264

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
             L  LP E+G L+ L+ L +    +  +PK + QL   KL     +S  +LP  +    
Sbjct: 265 NNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEI---G 321

Query: 481 SLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKG 513
            L +L+++D    +   LP EIG L+ L  L +KG
Sbjct: 322 QLQNLKLLDLSGNSLTTLPKEIGQLKNLYFLAMKG 356



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 151/373 (40%), Gaps = 93/373 (24%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           ++   +LK +DL  ++L     ++   QNL+ L++   ++L E    I  L  LE L+L 
Sbjct: 67  IEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVS-VNNLIELPQEIGQLQNLEQLNLS 125

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
             + LT+LP  I               LK L  +   + R T+         LP  I  L
Sbjct: 126 GNR-LTTLPQEI-------------GQLKKLETLHVYYNRLTI---------LPKEIGQL 162

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE 263
            N+ EL++Y    L ++   I +LQ  E + +H               D   +       
Sbjct: 163 QNLEELILYG-NSLTSLPEEIGQLQKFEKLYLH---------------DNQLT------- 199

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
                     +LP G C  ++L  +  +       LP E+G L+ L  L +    +  LP
Sbjct: 200 ----------TLPQGLCKLQNLEQI-YLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLP 248

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
           E +GQL  L +L LK  + L  +   I +L++++++++S+                    
Sbjct: 249 EEIGQLQNLRQLSLK-LNNLTTLPKEIGQLQNLDNLDLSD-------------------- 287

Query: 384 ERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG 443
                        ++L  +P  +   ++L  L+ +    L  LP E+G L+ L+ L + G
Sbjct: 288 -------------NQLTLIPKEIGQLQNLKLLD-LSGNSLTTLPKEIGQLQNLKLLDLSG 333

Query: 444 TGIREVPKSLAQL 456
             +  +PK + QL
Sbjct: 334 NSLTTLPKEIGQL 346



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 41/296 (13%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLG 119
           I   +NL  L + G+++T L  ++  L  L+ + + Y++L T LP ++   QNLE L L 
Sbjct: 113 IGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRL-TILPKEIGQLQNLEELIL- 170

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
           Y +SLT     I  L K E L L     LT+LP             +G   L+NL ++  
Sbjct: 171 YGNSLTSLPEEIGQLQKFEKLYL-HDNQLTTLP-------------QGLCKLQNLEQIYL 216

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP 239
              R T          LP  I  L  +  L +YS   L  +   I +LQ L  + + +  
Sbjct: 217 HQNRLT---------SLPKEIGQLRKLWTLYLYS-NELTTLPEEIGQLQNLRQLSL-KLN 265

Query: 240 NLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FE 297
           NL  L      +    + +   ++L L   P+             L +L+++D       
Sbjct: 266 NLTTLPKEIGQLQNLDNLDLSDNQLTL--IPKE---------IGQLQNLKLLDLSGNSLT 314

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
            LP E+G LQ L  L + G ++  LP+ +GQL  L  L +K   +L     +I KL
Sbjct: 315 TLPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLKNLYFLAMKGIPDLILQKENIRKL 370


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 169/354 (47%), Gaps = 29/354 (8%)

Query: 14   TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHWENLVSLKM 72
             F+ M+ELR+L+     N  +   +E +   +L    W  +P K L +     +L+ L +
Sbjct: 1135 AFADMSELRILRI---NNVQLSEDIECLS-NKLTLLNWPGYPSKYLPSTFQPPSLLELHL 1190

Query: 73   PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
            PGS V +LW+  QN  +LK ID   SK L + P+ S A  L  L L  C  L + HSSI 
Sbjct: 1191 PGSNVERLWNGTQNFKNLKEIDASDSKFLVETPNFSEAPKLRRLILRNCGRLNKVHSSIN 1250

Query: 133  YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR--STLPLLG 190
             L++L +LD++ C S  S    +  K LK LVL  C  L+  P+   C +   + L + G
Sbjct: 1251 SLHRLILLDMEGCVSFRSFSFPVTCKSLKTLVLSNCG-LEFFPEF-GCVMGYLTELHIDG 1308

Query: 191  VGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC- 249
              I +L  SI  L  +  L + +C RL ++ + I +L  L+++ ++ C NL   ++P C 
Sbjct: 1309 TSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLD--KIPPCL 1366

Query: 250  ---------NIDGTRSKEQPSSE-LKLKKCPR-----PESLPSGQCMF-KSLTSLEIIDC 293
                     +I GT     P  E L++  C R       SL      + +SL  L + DC
Sbjct: 1367 RYVKHLEELDIGGTSISTIPFLENLRILNCERLKSNIWHSLAGLAAQYLRSLNDLNLSDC 1426

Query: 294  PNF-ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
                E +P++L    +L  L +       L E + QL  L  L L +C++L+ +
Sbjct: 1427 NLVDEDIPNDLELFSSLEILDLSSNHFERLSESIKQLINLKVLYLNDCNKLKQV 1480



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 74/378 (19%)

Query: 230  LESIRIHRCPNLQFLEMPSC--------NIDGTRSKEQPSS-------ELKLKKCPRPES 274
            +  +RI R  N+Q  E   C        N  G  SK  PS+       EL L      E 
Sbjct: 1139 MSELRILRINNVQLSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGS-NVER 1197

Query: 275  LPSGQCMFKSLTSLE------IIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLG 327
            L +G   FK+L  ++      +++ PNF   P        L RLI+     + ++   + 
Sbjct: 1198 LWNGTQNFKNLKEIDASDSKFLVETPNFSEAP-------KLRRLILRNCGRLNKVHSSIN 1250

Query: 328  QLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDG 380
             L  L  L+++ C      S  +   KS++++ +SNC  L+ FPE       +   +IDG
Sbjct: 1251 SLHRLILLDMEGCVSFRSFSFPV-TCKSLKTLVLSNCG-LEFFPEFGCVMGYLTELHIDG 1308

Query: 381  SGIERIPSSV--------LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGN 432
            + I ++  S+        L L  C +L SLP+ +C   SL +L +  CK L+++P  L  
Sbjct: 1309 TSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRY 1368

Query: 433  LEALEELRVEGTGIREVP--KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            ++ LEEL + GT I  +P  ++L  L   +LK     S   L ++    +SL  L + DC
Sbjct: 1369 VKHLEELDIGGTSISTIPFLENLRILNCERLKSNIWHSLAGLAAQYL--RSLNDLNLSDC 1426

Query: 491  KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                 L DE                  ++P  L   SSLE L LS N+ + + ES+ QL 
Sbjct: 1427 N----LVDE------------------DIPNDLELFSSLEILDLSSNHFERLSESIKQLI 1464

Query: 551  SLVSLKLSN-NNLERIPE 567
            +L  L L++ N L+++P+
Sbjct: 1465 NLKVLYLNDCNKLKQVPK 1482



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 9/79 (11%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPF--TELRYFEWHQFPLKTL-NIL 62
            E  +N   FS+MT LR+LK         VH  E + +   +LR+  WH +PLKTL +  
Sbjct: 555 GESHLNAKAFSEMTNLRVLKLNN------VHLSEEIEYLSDQLRFLNWHGYPLKTLPSNF 608

Query: 63  HWENLVSLKMPGSKVTQLW 81
           +  NL+ L++P S +  LW
Sbjct: 609 NPTNLLELELPNSSIHHLW 627


>gi|15239799|ref|NP_199725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10176947|dbj|BAB10096.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008392|gb|AED95775.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 980

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 168/376 (44%), Gaps = 75/376 (19%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSK---NKCM-VHSLEGVPFT-ELRYFEWHQFPL 56
           S+I +++ ++   F  M  L+ L+F   K   N  + +H   G+ +   +R   W  +P+
Sbjct: 539 SEIQNDVFMSERVFEDMRNLKFLRFYNKKIDENPSLKLHLPRGLNYLPAVRLLHWDSYPM 598

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           K + +    E LV L+M  SKV +LW+  Q L  LK IDL +S  L ++PDLS A +LE 
Sbjct: 599 KYIPSQFRPECLVELRMMHSKVVKLWEGTQTLAYLKTIDLSFSNNLVEVPDLSKAISLET 658

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP 175
           L L  C SL E  SS+  L++L+ L L  C+ L  +P  I+   L+ L + GC  LK+ P
Sbjct: 659 LCLEGCQSLAELPSSVLNLHRLKWLRLTMCEKLEVIPLHINLASLEVLDMEGCLKLKSFP 718

Query: 176 KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRI 235
            ++    R  + +   GIEE+P SI   S                         LES+ I
Sbjct: 719 DISKNIER--IFMKNTGIEEIPPSISQWSR------------------------LESLDI 752

Query: 236 HRCPNLQ-FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
             C NL+ F  +P                                   KS+  + + D  
Sbjct: 753 SGCLNLKIFSHVP-----------------------------------KSVVYIYLTD-S 776

Query: 295 NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
             ERLPD + +L  L+ L +D    +  LPE    + +LS +   NC  LE ISSS F  
Sbjct: 777 GIERLPDCIKDLTWLHYLYVDNCRKLVSLPELPSSIKILSAI---NCESLERISSS-FDC 832

Query: 354 KSVESIEISNCSNLKG 369
            + + +E S   N  G
Sbjct: 833 PNAK-VEFSKSMNFDG 847



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 175/391 (44%), Gaps = 63/391 (16%)

Query: 410 KSLTSLEIID---CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQLA-LSKLKLK 464
           ++L  L+ ID      L  +PD L    +LE L +EG   + E+P S+  L  L  L+L 
Sbjct: 628 QTLAYLKTIDLSFSNNLVEVPD-LSKAISLETLCLEGCQSLAELPSSVLNLHRLKWLRLT 686

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL---PDEIGNLEYLKVLTIKGTAIREVPE 521
            C   E +P  +    +L SLE++D +  ++L   PD   N+E +    +K T I E+P 
Sbjct: 687 MCEKLEVIPLHI----NLASLEVLDMEGCLKLKSFPDISKNIERI---FMKNTGIEEIPP 739

Query: 522 SLGQLSSLEWLVLSDN-NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           S+ Q S LE L +S   NL+I     +   S+V + L+++ +ER+P+ +  L+ L Y  L
Sbjct: 740 SISQWSRLESLDISGCLNLKIFS---HVPKSVVYIYLTDSGIERLPDCIKDLTWLHY--L 794

Query: 581 FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--------PNELSEIIK---- 628
           + +N  ++         S+P   +S+++ +   NC  L+        PN   E  K    
Sbjct: 795 YVDNCRKL--------VSLPELPSSIKI-LSAINCESLERISSSFDCPNAKVEFSKSMNF 845

Query: 629 DGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVV 688
           DG  ++ +  + ++ K    PG E+P  F H++ G ++++        +  + F  C+++
Sbjct: 846 DGEARRVIT-QQWVYKRACLPGKEVPLEFSHRARGGSLTIHLEDENVCSSSLRFKACILL 904

Query: 689 ACSVSECCRHESVEDDRKCNLFDVVCDRRSE-GYDSYTSSYLGKISHVESDHVFLGSSIF 747
             S              + N+  V C    E G       + G +    + H+F+ +S+ 
Sbjct: 905 FPS-------------ERNNICTVYCRLIGESGRLIAAHRFGGVVKDFVTPHLFIFNSVL 951

Query: 748 AGENSCKRSDEFFFHIDRSCCEVKKCGIHFV 778
             E    R     F       E+ +CG+  +
Sbjct: 952 LEEVDVIR-----FGFSSIHHEITECGVQIL 977



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 56/212 (26%)

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           LE++ +  C +L   E+PS  ++  R K      L+L  C + E +P    +  +L SLE
Sbjct: 656 LETLCLEGCQSLA--ELPSSVLNLHRLKW-----LRLTMCEKLEVIP----LHINLASLE 704

Query: 290 IID---CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           ++D   C   +  PD   N++   R+ +  T I E+P  + Q + L              
Sbjct: 705 VLDMEGCLKLKSFPDISKNIE---RIFMKNTGIEEIPPSISQWSRL-------------- 747

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIP----FCNIDGSGIERIPSSV--------LKLN 394
                     ES++IS C NLK F  +P    +  +  SGIER+P  +        L ++
Sbjct: 748 ----------ESLDISGCLNLKIFSHVPKSVVYIYLTDSGIERLPDCIKDLTWLHYLYVD 797

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERL 426
            C KL SLP    +  S+  L  I+C+ LER+
Sbjct: 798 NCRKLVSLPE---LPSSIKILSAINCESLERI 826


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 113/225 (50%), Gaps = 17/225 (7%)

Query: 8   IQINPYTFSKMTELRLLK--------------FCGSKNKCMVHSLEGVPFTELRYFEWHQ 53
           I      F+ M++LRLLK              F     K    S     + ELRY + + 
Sbjct: 595 IDFTTQAFAGMSKLRLLKVYQSDKISRNSEDTFMKENFKVRFSSNFKFCYDELRYLDLYG 654

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           + LK+L N  + +NLV L MP S++ QLW  ++ L  LKR+DL +SK L + P+LS   N
Sbjct: 655 YSLKSLPNDFNAKNLVHLSMPCSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPNLSRVTN 714

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           LE L L  C SL + H S++ L  L+ L L  CK L SLP+  +  K L+ L+L GCS  
Sbjct: 715 LERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKF 774

Query: 172 KN-LPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
           +  L    +  +   L   G  + ELPSS+    N+  L +  CK
Sbjct: 775 EQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCK 819



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 177/402 (44%), Gaps = 52/402 (12%)

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG-FPEIPFCNIDGSGIERIP 387
            A +SKL L    + + IS +       E+ ++   SN K  + E+ + ++ G  ++ +P
Sbjct: 602 FAGMSKLRLLKVYQSDKISRNSEDTFMKENFKVRFSSNFKFCYDELRYLDLYGYSLKSLP 661

Query: 388 SSVLKLN------KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
           +     N       CS++E L   + + + L  +++   K L   P+ L  +  LE L +
Sbjct: 662 NDFNAKNLVHLSMPCSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPN-LSRVTNLERLVL 720

Query: 442 EG-TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
           E    + +V  SL  L  L  L LK C   +SLPS  Y  KSL  L +  C  F +  + 
Sbjct: 721 EDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLEN 780

Query: 500 IGNLEYLKVLTIKGTAIREVPESL---------------GQLSSLEWL-VLSDNNLQIIP 543
            GNLE LK L   GTA+RE+P SL               G  S+  W    S N+     
Sbjct: 781 FGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPSASWWFPRRSSNSTGFRL 840

Query: 544 ESLNQLSSLVSLKLSNNNL--ERIPERLDPLSSLKYLDLFENNLDRIPEYLR-------- 593
            +L+ L SL +L LS  NL  E     L  LSSL+YL L  NN   +P   R        
Sbjct: 841 HNLSGLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVTLPNLSRLSRLEDVQ 900

Query: 594 ----SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYF- 648
               +    +P   +S+ L +D RNC  L   +         +K  V     +   +Y  
Sbjct: 901 LENCTRLQELPDLPSSIGL-LDARNCTSLKNVQ-------SHLKNRVIRVLNLVLGLYTL 952

Query: 649 -PGNEIPKWFRHQSTGSTISLKTPQPTGYN-KLMGFAFCVVV 688
            PG+ +P W R++S+G  +  + P P  +N   +GF F +VV
Sbjct: 953 TPGSRLPDWIRYKSSGMEVIAELP-PNWFNSNFLGFWFAIVV 993


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 113/225 (50%), Gaps = 17/225 (7%)

Query: 8   IQINPYTFSKMTELRLLKFCGS------------KNKCMVHSLEGVPF--TELRYFEWHQ 53
           I  +   F +M +LRLLK   S            K  C VH    + F   ELRY   + 
Sbjct: 539 IDFSTQAFPRMYKLRLLKVYESNKISRNFGDTLNKENCKVHFSPKLRFCYDELRYLYLYG 598

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           + LK+L N  + +NLV L M  S + +LW  ++ L  LK +DL +SK L + PD S   N
Sbjct: 599 YSLKSLDNDFNAKNLVHLSMHYSHINRLWKGIKVLEKLKVVDLSHSKSLIETPDFSRVPN 658

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVLRGCSNL 171
           LE L L  C SL + H S+  LNKL  L L  C+ L SLP+S+   K L+  +L GCS L
Sbjct: 659 LERLVLEGCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRL 718

Query: 172 KNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCK 215
           ++ P+   +  +   L   G+ +  LPSS   L N+  L    C+
Sbjct: 719 EDFPENFGNLEMLKELHADGIPVRVLPSSFSLLRNLEILSFKGCR 763



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 147/361 (40%), Gaps = 53/361 (14%)

Query: 410 KSLTSLEIID---CKKLERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLK 464
           K L  L+++D    K L   PD    +  LE L +EG   + +V  SL  L  L+ L LK
Sbjct: 631 KVLEKLKVVDLSHSKSLIETPD-FSRVPNLERLVLEGCISLHKVHPSLGVLNKLNFLSLK 689

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            C   +SLPS +   KSL +  +  C      P+  GNLE LK L   G  +R +P S  
Sbjct: 690 NCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFS 749

Query: 525 QLSSLE--------------WLV--LSDNNLQIIPESLNQLSSLVSLKLSNNNL--ERIP 566
            L +LE              WL+   S ++   I   L+ L SL  L L   NL  E   
Sbjct: 750 LLRNLEILSFKGCRGPPSTSWLLPRRSSSSTGSILHHLSGLYSLTRLNLGYCNLSDETNL 809

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPT-----------SIPSEFTSLRLSVDLRNC 615
             L  LSSL+ L L  NN   +P                    I  E  S   S+  ++C
Sbjct: 810 SSLCLLSSLEVLGLSGNNFVTLPNIRGLSSLEGLLLEKCKRLQILPELPSSIYSLIAQDC 869

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKS------MYFPGNEIPKWFRHQSTGSTISLK 669
           + L+ N  ++++K  +       +T+   S      +   G+ IP W R+QS+G  +   
Sbjct: 870 ISLE-NASNQVLKSLFPTAKSPKKTFKCNSGAHLIYVMVYGSRIPDWIRYQSSGCEVEAD 928

Query: 670 TPQPTGYN-KLMGFAFCVV-------VACSVSECCRHESVEDDRKCNLFDVVCDRRSEGY 721
            P P  YN  L+G A   V       V   VS   R+ +       N   + CD+   G 
Sbjct: 929 LP-PNWYNSNLLGLALSFVTYVFASNVIIPVSYTLRYST--SSYIANRISIRCDKEGVGL 985

Query: 722 D 722
           D
Sbjct: 986 D 986



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           L L  C KL+SLPSS+C  KSL +  +  C +LE  P+  GNLE L+EL  +G  +R +P
Sbjct: 686 LSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLP 745

Query: 451 KSLAQLA-LSKLKLKKC 466
            S + L  L  L  K C
Sbjct: 746 SSFSLLRNLEILSFKGC 762



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCM 281
            +E+    R PNL+ L +  C    +  K  PS       + L LK C + +SLPS  C 
Sbjct: 647 LIETPDFSRVPNLERLVLEGCI---SLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCD 703

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
            KSL +  +  C   E  P+  GNL+ L  L  DG  +R LP     L  L  L  K C
Sbjct: 704 LKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLLRNLEILSFKGC 762



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 110 AQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS 169
           A+NL  L + Y S +      I+ L KL+V+DL   KSL   P       L+RLVL GC 
Sbjct: 610 AKNLVHLSMHY-SHINRLWKGIKVLEKLKVVDLSHSKSLIETPDFSRVPNLERLVLEGCI 668

Query: 170 NLKNL-PKMTSCHLRSTLPLLGV-GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
           +L  + P +   +  + L L     ++ LPSS+  L ++   ++  C RLE+   +   L
Sbjct: 669 SLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNL 728

Query: 228 QFLESIRIHRCP 239
           + L+ +     P
Sbjct: 729 EMLKELHADGIP 740


>gi|291231680|ref|XP_002735791.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 839

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 165/631 (26%), Positives = 266/631 (42%), Gaps = 138/631 (21%)

Query: 52  HQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           H+ P +  N+   E L  L +  + +T +  ++ NLV+L+ + ++ + + +   D+    
Sbjct: 136 HRIPKQVFNL---EQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDIGSLT 192

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCK----------------------SLT 149
            LE+L+L Y + LT     I  L KL+ L L+  K                       LT
Sbjct: 193 KLEVLELSY-NELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQLT 251

Query: 150 SLPTSIHSKYLKRLVLRGCSN--LKNLPKMTSCHLRS--TLPLLGVGIEELPSSIKCLSN 205
           SLP+ I    +K+L   G +N  L  +PK + C+L     L L G  ++ LPS I     
Sbjct: 252 SLPSEI--SLMKQLTNLGLNNNSLGCIPK-SICYLEQLIKLGLSGNNLQTLPSVI----- 303

Query: 206 IGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELK 265
             E  I  C    ++  S  ++Q+L  I+I+  PNL+ L + +  I              
Sbjct: 304 --ENWIELC----DLQLSDNQIQYL-PIQIYWIPNLEELNLSNNKIQDI----------- 345

Query: 266 LKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELP 323
                         C    LT L I+   N   ERLPDE+  L  L  L +DG  ++E+P
Sbjct: 346 -------------SCEIIKLTKLRILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIP 392

Query: 324 EGLGQLALLSKLEL-KNCSELEYISSSIFKLKSVE------------SIEISNC------ 364
           + +  L  L ++    NC  LE +   +  L  VE             IEI+N       
Sbjct: 393 DLVCNLLALKEIYFSNNC--LESVPDDVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHL 450

Query: 365 ----SNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSL 406
               + L  FP       E+   NID + I  IP+ +  ++         +K+++ P  +
Sbjct: 451 TLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSNNKIQTFPLGI 510

Query: 407 CMFKSLTSLEI----------------------IDCKKLERLPDELGNLEALEELRVEGT 444
           C  +SL +L++                      ++  K E  P  +  L +LE+L + G 
Sbjct: 511 CRLESLKTLDVSGNDLRELPTEIKKLINLKELFLNQNKFEVFPAVVCRLHSLEKLHLCGN 570

Query: 445 GIREVPKSLAQLALSKLKLKKCSS--FESLPSRLYVSKSLTSLEI---IDCKNFMRLPDE 499
           G+  V +S     L  L+    S   F   P+ L V  +L +L       CK    LP+ 
Sbjct: 571 GMVSVEESTELHHLKSLQEMHLSDNKFPHFPNELCVISNLKTLHFDQKFGCK-VRLLPEC 629

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN 559
           I  L  L+ L +   A+  +P  +G L+ L+ L +  NN+  +PESL  L +L SL L +
Sbjct: 630 IAELVNLEELYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLHLES 689

Query: 560 NNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           N L ++P R D L ++  L L  N L   P+
Sbjct: 690 NQLMKLPVRFDNLINIADLRLEFNPLMHPPK 720



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 171/362 (47%), Gaps = 46/362 (12%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFE--RLPDELGNLQALNRLIIDGTAIRELPEGLGQLA 330
           ESLP       SLT LE+++    E   +P E+G L+ L +L ++   +  +P+ +G+L+
Sbjct: 182 ESLPKD---IGSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLS 238

Query: 331 LLSKLELKNCSELEYISSSIFKLKSVESIEISNCS----------------------NLK 368
            L+ L L + ++L  + S I  +K + ++ ++N S                      NL+
Sbjct: 239 ELTVLGLSS-NQLTSLPSEISLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLGLSGNNLQ 297

Query: 369 GFPE-----IPFCNIDGSG--IERIPSSVLKLNKCSKLE----SLPSSLCMFKSLTSLEI 417
             P      I  C++  S   I+ +P  +  +    +L      +    C    LT L I
Sbjct: 298 TLPSVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLRI 357

Query: 418 I--DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSR 475
           +  +   LERLPDE+  L  LE L V+G  ++E+P  +  L   K      +  ES+P  
Sbjct: 358 LGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPDD 417

Query: 476 LYVSKSLTSLEIIDCK-NFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
           + +   L+ +EI+    N M+ LP EI N++ L  LT+    +   P  L  L+ ++ L 
Sbjct: 418 VCL---LSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFPLGLCSLAEVQVLN 474

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
           + DN++  IP  +  +S L  L LSNN ++  P  +  L SLK LD+  N+L  +P  ++
Sbjct: 475 IDDNDITHIPAEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDLRELPTEIK 534

Query: 594 SF 595
             
Sbjct: 535 KL 536



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 163/351 (46%), Gaps = 58/351 (16%)

Query: 277 SGQCMF---KSLTSLEIIDC-----PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQ 328
           SGQC+    K + +LE + C      N   +P E+ NL  L  L+I    I  LP+ +G 
Sbjct: 131 SGQCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDIGS 190

Query: 329 LALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS 388
           L  L  LEL   +EL  I   I +L+ ++ + +++                 + +E IP 
Sbjct: 191 LTKLEVLELS-YNELTSIPKEIGQLEKLKQLYLNH-----------------NKLESIPK 232

Query: 389 SVLKLNKCS-------KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRV 441
            + KL++ +       +L SLPS + + K LT+L + +   L  +P  +  LE L +L +
Sbjct: 233 EMGKLSELTVLGLSSNQLTSLPSEISLMKQLTNLGL-NNNSLGCIPKSICYLEQLIKLGL 291

Query: 442 EGTGIREVPKSLAQ-LALSKLKLKKCSSFESLPSRLYVSKSL------------------ 482
            G  ++ +P  +   + L  L+L   +  + LP ++Y   +L                  
Sbjct: 292 SGNNLQTLPSVIENWIELCDLQLSD-NQIQYLPIQIYWIPNLEELNLSNNKIQDISCEII 350

Query: 483 --TSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
             T L I+   N    RLPDEI  L  L++L + G  ++E+P+ +  L +L+ +  S+N 
Sbjct: 351 KLTKLRILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNC 410

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           L+ +P+ +  LS +  L L  N ++ +P  +  +  L +L L  N LD  P
Sbjct: 411 LESVPDDVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFP 461



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 5/175 (2%)

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSL 482
           L R+P ++ NLE L+ L +    I  +P  ++ L   ++ + + ++ ESLP  +    SL
Sbjct: 135 LHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDI---GSL 191

Query: 483 TSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
           T LE+++        +P EIG LE LK L +    +  +P+ +G+LS L  L LS N L 
Sbjct: 192 TKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQLT 251

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            +P  ++ +  L +L L+NN+L  IP+ +  L  L  L L  NNL  +P  + ++
Sbjct: 252 SLPSEISLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLGLSGNNLQTLPSVIENW 306



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 239/541 (44%), Gaps = 79/541 (14%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHS 129
           L++  +++T +  ++  L  LK++ L ++KL +   ++     L +L L   + LT   S
Sbjct: 197 LELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLS-SNQLTSLPS 255

Query: 130 SIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCS--NLKNLPKMTSCHLR-STL 186
            I  + +L  L L+   SL  +P SI   YL++L+  G S  NL+ LP +    +    L
Sbjct: 256 EISLMKQLTNLGLNN-NSLGCIPKSI--CYLEQLIKLGLSGNNLQTLPSVIENWIELCDL 312

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIH---------- 236
            L    I+ LP  I  + N+ EL + S  ++++IS  I KL  L  + ++          
Sbjct: 313 QLSDNQIQYLPIQIYWIPNLEELNL-SNNKIQDISCEIIKLTKLRILGLNNNALERLPDE 371

Query: 237 --RCPNLQFLEMPSCNIDGTRSKEQPS---SELKLKKCPRP----ESLPSGQCMFKSLTS 287
             + PNL+ L      +DG + KE P    + L LK+        ES+P   C+   +  
Sbjct: 372 ICQLPNLELL-----GVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPDDVCLLSDVEI 426

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L  +     + LP E+ N++ L+ L +D   +   P GL  LA +  L + + +++ +I 
Sbjct: 427 L-FLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFPLGLCSLAEVQVLNIDD-NDITHIP 484

Query: 348 SSIFKLKSVESIEISNCSNLKGFP-------EIPFCNIDGSGIERIPSSVLKLNKC---- 396
           + I  +  ++ + +SN + ++ FP        +   ++ G+ +  +P+ + KL       
Sbjct: 485 AEIENMSHLQHLTLSN-NKIQTFPLGICRLESLKTLDVSGNDLRELPTEIKKLINLKELF 543

Query: 397 ---SKLESLPSSLCMFKSLTSLEI------------------------IDCKKLERLPDE 429
              +K E  P+ +C   SL  L +                        +   K    P+E
Sbjct: 544 LNQNKFEVFPAVVCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQEMHLSDNKFPHFPNE 603

Query: 430 L---GNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           L    NL+ L   +  G  +R +P+ +A+L  L +L +   ++ E+LP  +     L  L
Sbjct: 604 LCVISNLKTLHFDQKFGCKVRLLPECIAELVNLEELYVDN-NALETLPVMIGALAKLQKL 662

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
            +  C N   LP+ +  L+ L  L ++   + ++P     L ++  L L  N L   P+ 
Sbjct: 663 SVC-CNNITHLPESLCMLQNLTSLHLESNQLMKLPVRFDNLINIADLRLEFNPLMHPPKD 721

Query: 546 L 546
           +
Sbjct: 722 V 722



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 20/259 (7%)

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIP-FCNIDGSGIERIPSSVLKLNKCSKLES 401
           L  I   +F L+ ++ + ISN +     PEI    N++   I+            + +ES
Sbjct: 135 LHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQN-----------NNIES 183

Query: 402 LPSSLCMFKSLTSLEIIDC--KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-L 458
           LP  +    SLT LE+++    +L  +P E+G LE L++L +    +  +PK + +L+ L
Sbjct: 184 LPKDI---GSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSEL 240

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
           + L L   +   SLPS + + K LT+L + +  +   +P  I  LE L  L + G  ++ 
Sbjct: 241 TVLGLSS-NQLTSLPSEISLMKQLTNLGL-NNNSLGCIPKSICYLEQLIKLGLSGNNLQT 298

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           +P  +     L  L LSDN +Q +P  +  + +L  L LSNN ++ I   +  L+ L+ L
Sbjct: 299 LPSVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLRIL 358

Query: 579 DLFENNLDRIPEYLRSFPT 597
            L  N L+R+P+ +   P 
Sbjct: 359 GLNNNALERLPDEICQLPN 377



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 10/158 (6%)

Query: 478 VSKSLTSLEIIDC-----KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
           + K + +LE + C      N   +P EI NL  L+VL I+   I  +P+ +G L+ LE L
Sbjct: 138 IPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDIGSLTKLEVL 197

Query: 533 VLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            LS N L  IP+ + QL  L  L L++N LE IP+ +  LS L  L L  N L  +P  +
Sbjct: 198 ELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQLTSLPSEI 257

Query: 593 RSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG 630
                S+  + T+L L+ +   C+      L ++IK G
Sbjct: 258 -----SLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLG 290



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 48/82 (58%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           + + G  +  +P+ +  L  L+ L +S+NN+  IP  ++ L +L  L + NNN+E +P+ 
Sbjct: 128 VNLSGQCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKD 187

Query: 569 LDPLSSLKYLDLFENNLDRIPE 590
           +  L+ L+ L+L  N L  IP+
Sbjct: 188 IGSLTKLEVLELSYNELTSIPK 209


>gi|297825393|ref|XP_002880579.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326418|gb|EFH56838.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 192/421 (45%), Gaps = 51/421 (12%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKC-MVHSLE---GVP------FTELRY 48
           +SK+  EI I     + M  LR LK   S    +C +V ++E    VP         +RY
Sbjct: 540 VSKLKEEIAIATNKLTLMPNLRYLKIFDSSCPRQCKVVEAVECKVYVPDELELCLKNIRY 599

Query: 49  FEWHQFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDL 107
           F W +FP   L    + ENLV L++P SK+ ++WDDV++  +LK +DL +S  L  L  L
Sbjct: 600 FHWLKFPSMELPPDFNPENLVDLRLPYSKIERVWDDVKDTPNLKWVDLSHSTKLIDLSAL 659

Query: 108 SLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
             A++LE L+L  C++L         +  L  L+L  C SL+ LP   +   LK L+L G
Sbjct: 660 WKAESLERLNLEGCTNLELFPKDEGNMKSLAFLNLRGCTSLSFLPEMENFDCLKTLILSG 719

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
           C++ ++  ++ S +L   L L G  I +LP +I  L  +  L +  CK L+ +   + KL
Sbjct: 720 CTSFEDF-QVKSKNLE-YLHLDGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPDCLGKL 777

Query: 228 QFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
           + LE + +  C  L+       N        +DGT+ ++ P     L +C          
Sbjct: 778 KALEELILSGCSRLRSFPEIKDNMENLQILLLDGTKIRDLPKI---LLRCANS------- 827

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                      +D  N +R P   G        +     I  L   +  L  L  ++LK 
Sbjct: 828 -----------VDQMNLQRSPSMSGLSLLRRLCLSRNEMIISLQSSISDLYHLKWIDLKY 876

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
           C++L+ IS       +++ ++  +C++LK     P         E++PSS +  N C KL
Sbjct: 877 CTKLQSIS---MLPPNLQCLDAHDCTSLKTVAS-PLAR--PLATEQVPSSFIFTN-CQKL 929

Query: 400 E 400
           E
Sbjct: 930 E 930



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 207/482 (42%), Gaps = 73/482 (15%)

Query: 348  SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
            S+++K +S+E + +  C+NL+ FP+      D   ++ +  + L L  C+ L  LP  + 
Sbjct: 657  SALWKAESLERLNLEGCTNLELFPK------DEGNMKSL--AFLNLRGCTSLSFLPE-ME 707

Query: 408  MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
             F  L +L +  C   E    +  NLE L    ++GT I ++P+++ +L  L  L LK C
Sbjct: 708  NFDCLKTLILSGCTSFEDFQVKSKNLEYL---HLDGTEITDLPQTIVELQRLIVLNLKDC 764

Query: 467  SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
               ++LP  L   K+L  L +  C      P+   N+E L++L + GT IR++P+ L + 
Sbjct: 765  KMLDTLPDCLGKLKALEELILSGCSRLRSFPEIKDNMENLQILLLDGTKIRDLPKILLRC 824

Query: 527  SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE---- 582
            ++     +   NLQ  P               N  +  +   +  L  LK++DL      
Sbjct: 825  AN----SVDQMNLQRSPSMSGLSLLRRLCLSRNEMIISLQSSISDLYHLKWIDLKYCTKL 880

Query: 583  NNLDRIPEYLR-------------SFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
             ++  +P  L+             + P + P     +  S    NC KL+    +EI   
Sbjct: 881  QSISMLPPNLQCLDAHDCTSLKTVASPLARPLATEQVPSSFIFTNCQKLEHAAKNEITCY 940

Query: 630  GWMKQSVNGETY----------ITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKL 679
            G  K  +  +T              +  FPG+E+P WF H+S+G+ +  + P+    N  
Sbjct: 941  GHNKGRLLSKTLNRHNKGLCFEALVATCFPGSEVPDWFGHKSSGAVLEPELPRHWSENGF 1000

Query: 680  MGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISH----- 734
            +G A C +V+    +  R+ +++    C+  +V   R S    SY +S +G +S      
Sbjct: 1001 VGIALCAIVSFE-EQKIRNNNLQVKCICDFNNV---RTSS---SYFNSPVGGLSETGNEH 1053

Query: 735  --VESDHVFLGSSIFAGENSCKRSD----------EFFFHIDRSC-----CEVKKCGIHF 777
              ++S HVF+G + +     C+  D             F +         CEV KCG   
Sbjct: 1054 RTIKSTHVFIGYTNWLNIKKCQEDDGKKGCFPTKASIKFQVTDDIGEVKNCEVLKCGFSL 1113

Query: 778  VH 779
            V+
Sbjct: 1114 VY 1115


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 177/378 (46%), Gaps = 52/378 (13%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS----------------- 341
           LP ++G LQ L +L + G  I  LP+ +G L  L KL+L N                   
Sbjct: 63  LPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLKTLPKDIEQLQKPLVL 122

Query: 342 ELEY-----ISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSS 389
            L Y     +   I KLK ++ +E+ N + LK  P+       +   N+  + ++ +P  
Sbjct: 123 HLNYNNFTTLPKEIGKLKELQGLELYN-NQLKTLPKDIERLQNLQVLNLTNNQLKTLPKD 181

Query: 390 VLKLNKCSKLESLPSSLCMFKS----LTSLEIIDC--KKLERLPDELGNLEALEELRVEG 443
           + KL     L    + L +       L +L+++D    +L  LP ++G+L+ L++L +  
Sbjct: 182 IGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSH 241

Query: 444 TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
             +  +PK + +L   ++     +   +LP  +   K L  L + D + F  LP EIG L
Sbjct: 242 NKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQ-FTTLPKEIGQL 300

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           + L+VL +    +  +P+ +G+L +L+ L L  N L  +P+ +  L  L  L LSNN L 
Sbjct: 301 QNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLT 360

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPE---YLRSFP---------TSIPSEFTSLR--LS 609
            +P+ +  L +L+ L L  N L  +P+    L++ P         TS+P +   L+    
Sbjct: 361 TLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQK 420

Query: 610 VDL-RNCLKLDPNELSEI 626
           +DL  N L   PNE+ ++
Sbjct: 421 LDLSNNQLTTLPNEIGKL 438



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 17/330 (5%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +LP      K L  LE+ +    + LP ++  LQ L  L +    ++ LP+ +G+L  L 
Sbjct: 131 TLPKEIGKLKELQGLELYNN-QLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQ 189

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCS------NLKGFPEIPFCNIDGSGIERIP 387
            L L N ++L  +S  I KL++++ ++++N        ++    E+   ++  + +  +P
Sbjct: 190 VLRLGN-NKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALP 248

Query: 388 SSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELR 440
             + KL          ++L +LP  +   K L  L + D  +   LP E+G L+ L  L 
Sbjct: 249 KDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLED-NQFTTLPKEIGQLQNLRVLY 307

Query: 441 VEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEI 500
           +    +  +PK + +L   ++     +   +LP  +   K L  L + + +    LP EI
Sbjct: 308 LYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQ-LTTLPKEI 366

Query: 501 GNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN 560
           G L+ L+VL +    +  +P+ +GQL +L  L LS N L  +P+ + +L +L  L LSNN
Sbjct: 367 GELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNN 426

Query: 561 NLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L  +P  +  L +L+ L L  N L  +P+
Sbjct: 427 QLTTLPNEIGKLQNLQELYLSNNKLKTLPD 456



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 159/325 (48%), Gaps = 34/325 (10%)

Query: 312 LIID--GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKG 369
           LI+D  G  +  LP+ +G+L  L KL+L+  + +  +   I  LK ++ +++SN + LK 
Sbjct: 51  LILDLIGNQLTTLPKDIGKLQKLQKLDLR-GNRIATLPKEIGYLKELQKLDLSN-NQLKT 108

Query: 370 FP------EIPFC-NIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSL 415
            P      + P   +++ +    +P  + KL +   LE       +LP  +   ++L  L
Sbjct: 109 LPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVL 168

Query: 416 EIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPS 474
            + +  +L+ LP ++G L+ L+ LR+    +  + K + +L  L  L L   +   +LP 
Sbjct: 169 NLTN-NQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTN-NQLTTLPK 226

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            +   K L  L++   K    LP +IG L+ L+VL + G  +  +P+ +G L  L+ L L
Sbjct: 227 DIGHLKELQDLDLSHNK-LTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHL 285

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE---Y 591
            DN    +P+ + QL +L  L L NN L  +P+ +  L +L+ L L  N L  +P+   +
Sbjct: 286 EDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGH 345

Query: 592 LRSFP---------TSIPSEFTSLR 607
           L+            T++P E   L+
Sbjct: 346 LKGLQELYLSNNQLTTLPKEIGELQ 370



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 213/494 (43%), Gaps = 76/494 (15%)

Query: 80  LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEV 139
           L + +QN   +  +DL  ++L T   D+   Q L+ LDL   + +      I YL +L+ 
Sbjct: 40  LTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDL-RGNRIATLPKEIGYLKELQK 98

Query: 140 LDLDRCKSLTSLPTSIHSKYLKRLVLR-GCSNLKNLPK-MTSCHLRSTLPLLGVGIEELP 197
           LDL   + L +LP  I  +  K LVL    +N   LPK +        L L    ++ LP
Sbjct: 99  LDLSNNQ-LKTLPKDI-EQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLP 156

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR------------IHRCPNLQFLE 245
             I+ L N+ ++L  +  +L+ +   I KLQ L+ +R            I +  NLQ L+
Sbjct: 157 KDIERLQNL-QVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLD 215

Query: 246 MPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGN 305
           + +  +                      +LP      K L  L++        LP ++G 
Sbjct: 216 LTNNQL---------------------TTLPKDIGHLKELQDLDL-SHNKLTALPKDIGK 253

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           LQ L  L + G  +  LP+ +G L  L  L L++ ++   +   I +L+++  + + N  
Sbjct: 254 LQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLED-NQFTTLPKEIGQLQNLRVLYLYN-- 310

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
                                          ++L  LP  +   ++L  L  +   +L  
Sbjct: 311 -------------------------------NQLTILPKEIGKLQNLQVL-YLHSNQLTT 338

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSL 485
           LP E+G+L+ L+EL +    +  +PK + +L   ++     +   +LP  +   ++L  L
Sbjct: 339 LPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVL 398

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
             +       LP +IG L+ L+ L +    +  +P  +G+L +L+ L LS+N L+ +P+ 
Sbjct: 399 -YLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDE 457

Query: 546 LNQLSSLVSLKLSN 559
           + +L  L +L L +
Sbjct: 458 IGKLQKLRTLDLDD 471



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 40/362 (11%)

Query: 5   NSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHW 64
           N++++  P    ++  L++L    ++ K +   +  +   ++     ++  + +  I   
Sbjct: 149 NNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKL 208

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSS 123
           +NL  L +  +++T L  D+ +L  L+ +DL ++KL T LP D+   QNL++LDL   + 
Sbjct: 209 QNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKL-TALPKDIGKLQNLQVLDLS-GNQ 266

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTSCHL 182
           LT     I YL +L+VL L+  +  T+LP  I      R++    + L  LPK +     
Sbjct: 267 LTTLPKDIGYLKELQVLHLEDNQ-FTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQN 325

Query: 183 RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              L L    +  LP  I  L  + EL + S  +L  +   I +LQ L+ + +H     Q
Sbjct: 326 LQVLYLHSNQLTTLPKEIGHLKGLQELYL-SNNQLTTLPKEIGELQNLQVLYLHSN---Q 381

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
              +P                   K+  + ++LP     +  LTS           LP +
Sbjct: 382 LTTLP-------------------KEIGQLQNLPVLYLSYNQLTS-----------LPKD 411

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           +G LQ L +L +    +  LP  +G+L  L +L L N ++L+ +   I KL+ + ++++ 
Sbjct: 412 IGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSN-NKLKTLPDEIGKLQKLRTLDLD 470

Query: 363 NC 364
           + 
Sbjct: 471 DI 472



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 179/387 (46%), Gaps = 43/387 (11%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P     + EL+ L    ++ K +   +E +    + +  ++ F      I   + L  L+
Sbjct: 87  PKEIGYLKELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLE 146

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
           +  +++  L  D++ L +L+ ++L  ++L T   D+   QNL++L LG  + LT     I
Sbjct: 147 LYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLG-NNKLTILSKEI 205

Query: 132 QYLNKLEVLDLDRCKSLTSLPTSI-HSKYLKRLVL---------RGCSNLKNLPKMT-SC 180
             L  L+VLDL   + LT+LP  I H K L+ L L         +    L+NL  +  S 
Sbjct: 206 GKLQNLQVLDLTNNQ-LTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSG 264

Query: 181 HLRSTLP--------LLGVGIEE-----LPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
           +  +TLP        L  + +E+     LP  I  L N+  L +Y+  +L  +   I KL
Sbjct: 265 NQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYN-NQLTILPKEIGKL 323

Query: 228 QFLESIRIHRCPNLQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSL 285
           Q L+ + +H     Q   +P    ++ G +     +++L         +LP      ++L
Sbjct: 324 QNLQVLYLHSN---QLTTLPKEIGHLKGLQELYLSNNQL--------TTLPKEIGELQNL 372

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             L  +       LP E+G LQ L  L +    +  LP+ +G+L  L KL+L N ++L  
Sbjct: 373 QVL-YLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSN-NQLTT 430

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPE 372
           + + I KL++++ + +SN + LK  P+
Sbjct: 431 LPNEIGKLQNLQELYLSN-NKLKTLPD 456


>gi|224116222|ref|XP_002331991.1| predicted protein [Populus trichocarpa]
 gi|222832115|gb|EEE70592.1| predicted protein [Populus trichocarpa]
          Length = 556

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 138/267 (51%), Gaps = 17/267 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI-LHWE 65
           + Q N   FSKM+ LRLLK     N  +    E +   +LR+ EWH +P K+L   L  +
Sbjct: 6   DAQWNMEAFSKMSRLRLLKI---DNVQLSEGPEDLS-NKLRFLEWHSYPSKSLPAGLQVD 61

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLT 125
            LV L M  S + QL       V+LK I+L  S  L++ PDL+   NLE L L  C+SL+
Sbjct: 62  ELVELHMANSSIDQL-----CAVNLKIINLSNSLNLSRTPDLTGIPNLESLILEGCTSLS 116

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTSCHLRS 184
           + H S+     L+ ++L  C+S+  LP+++  + LK   L GCS L+  P  + + +   
Sbjct: 117 KIHPSLGSHKNLQYVNLVNCESIRILPSNLEMESLKVFTLDGCSKLEKFPDVLGNMNCLM 176

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC---PNL 241
            L L   GI +L SSI+ L  +G L + +CK LE+I SSI     LE  R  +C   P  
Sbjct: 177 VLCLDETGITKLSSSIRHLIGLGLLSMKNCKNLESIPSSIRCFTMLE--RYLQCLSNPRP 234

Query: 242 QF-LEMPSCNIDGTRSKEQPSSELKLK 267
            F + +P   I G  + +   S + ++
Sbjct: 235 GFGIAVPGNEIPGWFNHQSKGSSISVQ 261



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 178/390 (45%), Gaps = 77/390 (19%)

Query: 426 LPDELGNLEALEE------LRVEGTGIREVPKSLAQLALSKLKLKKCSSF--ESLPSRLY 477
           + D   N+EA  +      L+++   + E P+ L+    +KL+  +  S+  +SLP+ L 
Sbjct: 4   IKDAQWNMEAFSKMSRLRLLKIDNVQLSEGPEDLS----NKLRFLEWHSYPSKSLPAGLQ 59

Query: 478 VSKSL--------------TSLEIIDCKNFM---RLPDEIGNLEYLKVLTIKG-TAIREV 519
           V + +               +L+II+  N +   R PD  G +  L+ L ++G T++ ++
Sbjct: 60  VDELVELHMANSSIDQLCAVNLKIINLSNSLNLSRTPDLTG-IPNLESLILEGCTSLSKI 118

Query: 520 PESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKY 577
             SLG   +L+++ L +  +++I+P +L ++ SL    L   + LE+ P+ L  ++ L  
Sbjct: 119 HPSLGSHKNLQYVNLVNCESIRILPSNL-EMESLKVFTLDGCSKLEKFPDVLGNMNCLMV 177

Query: 578 LDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD--PNELS-EIIKDGWMKQ 634
           L L E  + ++   +R            L L + ++NC  L+  P+ +    + + +++ 
Sbjct: 178 LCLDETGITKLSSSIR--------HLIGLGL-LSMKNCKNLESIPSSIRCFTMLERYLQC 228

Query: 635 SVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSE 694
             N        +  PGNEIP WF HQS GS+IS++ P  +     MGF  CV  +     
Sbjct: 229 LSNPRPGF--GIAVPGNEIPGWFNHQSKGSSISVQVPSWS-----MGFVACVGFSA---- 277

Query: 695 CCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVE--SDHVFLGSSIF----- 747
                   +    +LF   C  ++ G ++Y S      + ++  SDH++L    F     
Sbjct: 278 --------NRESPSLF---CQFKANGRENYPSPMCISCNSIQVLSDHIWLFYLSFDYLKE 326

Query: 748 --AGENSCKRSDEFFFHIDRSCCEVKKCGI 775
               ++    + E  FH  +   +VK CG+
Sbjct: 327 LKEWQHGSFSNIELSFHSFQPGVKVKNCGV 356



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 14/196 (7%)

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           ID       P++L N   L  L       + LP GL Q+  L +L + N S  +  + ++
Sbjct: 25  IDNVQLSEGPEDLSN--KLRFLEWHSYPSKSLPAGL-QVDELVELHMANSSIDQLCAVNL 81

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDG-SGIERIPSSV--------LKLNKCSKLES 401
             +    S+ +S   +L G P +    ++G + + +I  S+        + L  C  +  
Sbjct: 82  KIINLSNSLNLSRTPDLTGIPNLESLILEGCTSLSKIHPSLGSHKNLQYVNLVNCESIRI 141

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSK 460
           LPS+L M +SL    +  C KLE+ PD LGN+  L  L ++ TGI ++  S+  L  L  
Sbjct: 142 LPSNLEM-ESLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETGITKLSSSIRHLIGLGL 200

Query: 461 LKLKKCSSFESLPSRL 476
           L +K C + ES+PS +
Sbjct: 201 LSMKNCKNLESIPSSI 216



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 93/231 (40%), Gaps = 33/231 (14%)

Query: 239 PNLQFLEMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEII 291
           PNL+ L +  C    + SK  PS         + L  C     LPS   M +SL    + 
Sbjct: 102 PNLESLILEGCT---SLSKIHPSLGSHKNLQYVNLVNCESIRILPSNLEM-ESLKVFTLD 157

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
            C   E+ PD LGN+  L  L +D T I +L   +  L  L  L +KNC  LE I SSI 
Sbjct: 158 GCSKLEKFPDVLGNMNCLMVLCLDETGITKLSSSIRHLIGLGLLSMKNCKNLESIPSSIR 217

Query: 352 KLKSVESIEISNCSNLKGFP------EIPFC---NIDGSGIE-RIPSSVLKLNKCSKLES 401
               +E       +   GF       EIP        GS I  ++PS  +    C    +
Sbjct: 218 CFTMLERYLQCLSNPRPGFGIAVPGNEIPGWFNHQSKGSSISVQVPSWSMGFVACVGFSA 277

Query: 402 ---LPSSLCMFKS-----LTSLEIIDCKKLERLPDELG----NLEALEELR 440
               PS  C FK+       S   I C  ++ L D +     + + L+EL+
Sbjct: 278 NRESPSLFCQFKANGRENYPSPMCISCNSIQVLSDHIWLFYLSFDYLKELK 328



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSL-AQLALSKLKLKKCSSFESLPSRLYVSK 480
           L R PD L  +  LE L +EG T + ++  SL +   L  + L  C S   LPS L + +
Sbjct: 92  LSRTPD-LTGIPNLESLILEGCTSLSKIHPSLGSHKNLQYVNLVNCESIRILPSNLEM-E 149

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNL 539
           SL    +  C    + PD +GN+  L VL +  T I ++  S+  L  L  L + +  NL
Sbjct: 150 SLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETGITKLSSSIRHLIGLGLLSMKNCKNL 209

Query: 540 QIIPESL 546
           + IP S+
Sbjct: 210 ESIPSSI 216


>gi|442621260|ref|NP_001262988.1| scribbled, isoform T [Drosophila melanogaster]
 gi|440217925|gb|AGB96368.1| scribbled, isoform T [Drosophila melanogaster]
          Length = 2444

 Score =  104 bits (259), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  100 bits (249), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVSL----TDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|386766571|ref|NP_001247319.1| scribbled, isoform N [Drosophila melanogaster]
 gi|383292967|gb|AFH06636.1| scribbled, isoform N [Drosophila melanogaster]
          Length = 2554

 Score =  104 bits (259), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)

Query: 275 LPSGQCMFKSLTSLEII--DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           LP     F++L  L++   D P+   +PD++ +LQ+L         I +LP G  QL  L
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPD---IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L + S L  + +    L  +ES+E+    NL               ++ +P ++ +
Sbjct: 132 TVLGLNDMS-LTTLPADFGSLTQLESLELR--ENL---------------LKHLPETISQ 173

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K  +L       E LP  L     L  L  +D  +L+RLP ELG L  L  L V    
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENR 232

Query: 446 IREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           + E+P  ++ L +L+ L L + +  E+LP  +     LT L++ D     RL D +GN E
Sbjct: 233 LEELPNEISGLVSLTDLDLAQ-NLLEALPDGIAKLSRLTILKL-DQNRLQRLNDTLGNCE 290

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            ++ L +    + E+P S+GQ++ L  L +  N L+ +P  + Q ++L  L L +N L++
Sbjct: 291 NMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKK 350

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +P  L   + L  LD+  N L  +P  L
Sbjct: 351 LPPELGNCTVLHVLDVSGNQLLYLPYSL 378



 Score =  100 bits (249), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 24/330 (7%)

Query: 298 RLPDE-LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           ++P+E L   + L  L +D   IR+LP+   +L  L KL L + +E+  +   I   +++
Sbjct: 27  QVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEIGRLPPDIQNFENL 85

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
             +++S        P+IP        I+ + S  +     + +  LPS     K+LT L 
Sbjct: 86  VELDVSR----NDIPDIP------DDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + D   L  LP + G+L  LE L +    ++ +P++++QL  L +L L   +  E LP  
Sbjct: 136 LND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD-NEIEDLPPY 193

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           L     L  L  +D     RLP E+G L  L  L +    + E+P  +  L SL  L L+
Sbjct: 194 LGYLPGLHEL-WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLA 252

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            N L+ +P+ + +LS L  LKL  N L+R+ + L    +++ L L EN       +L   
Sbjct: 253 QNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTEN-------FLSEL 305

Query: 596 PTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
           P SI        L+VD RN L+  P E+ +
Sbjct: 306 PASIGQMTKLNNLNVD-RNALEYLPLEIGQ 334



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)

Query: 372 EIPFCNIDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKL 423
           ++ F +     + ++P  +L+ ++         + +  LP +      L  L + D  ++
Sbjct: 14  QVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSD-NEI 72

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLT 483
            RLP ++ N E L EL V    I ++P  +  L   ++     +    LPS     K+LT
Sbjct: 73  GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132

Query: 484 SLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIP 543
            L + D  +   LP + G+L  L+ L ++   ++ +PE++ QL+ L+ L L DN ++ +P
Sbjct: 133 VLGLND-MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLP 191

Query: 544 ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPT------ 597
             L  L  L  L L +N L+R+P  L  L+ L YLD+ EN L+ +P  +    +      
Sbjct: 192 PYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDL 251

Query: 598 ------SIPSEFTSL-RLSVDLRNCLKLDPNELSEI 626
                 ++P     L RL++     LKLD N L  +
Sbjct: 252 AQNLLEALPDGIAKLSRLTI-----LKLDQNRLQRL 282



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 172/417 (41%), Gaps = 86/417 (20%)

Query: 60  NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           N      L  L +  +++ +L  D+QN  +L  +D+  + +     D+   Q+L++ D  
Sbjct: 55  NFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFS 114

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT 178
             + + +  S    L  L VL L+   SLT+LP    S   L+ L LR  + LK+LP+  
Sbjct: 115 -SNPIPKLPSGFSQLKNLTVLGLND-MSLTTLPADFGSLTQLESLELRE-NLLKHLPETI 171

Query: 179 SCHLRSTLPLLGVG---IEELPSSIKCLSNIGELLI--YSCKRLENISSSIFKLQFLE-- 231
           S    + L  L +G   IE+LP  +  L  + EL +     +RL      + KL +L+  
Sbjct: 172 S--QLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVS 229

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
             R+   PN          I G  S     ++L L +    E+LP G      LT L++ 
Sbjct: 230 ENRLEELPN---------EISGLVSL----TDLDLAQ-NLLEALPDGIAKLSRLTILKL- 274

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           D    +RL D LGN + +  LI+    + ELP  +GQ+  L+ L                
Sbjct: 275 DQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNL---------------- 318

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
                                    N+D + +E +P   L++ +C+ L  L        S
Sbjct: 319 -------------------------NVDRNALEYLP---LEIGQCANLGVL--------S 342

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L         KL++LP ELGN   L  L V G  +  +P SL  L L  + L +  S
Sbjct: 343 LRD------NKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQS 393


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 160/307 (52%), Gaps = 20/307 (6%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P E+G    L +L +    I ++PE L  L  L++L ++  + L  I   I KLK+++ 
Sbjct: 6   VPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVR-YNALTAIPDEISKLKNMKI 64

Query: 359 IEISNCSNLK------GFPEIPFCNIDGSGIERIPS--------SVLKLNKCSKLESLPS 404
           + +S+    K         ++    ++ + +  IP         ++LKLN  +K+  +P 
Sbjct: 65  LNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNN-NKIAKIPD 123

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKL 463
           SLC  + LT L  +    L  +PD +G L++++ L+++   I ++P SL  L  L++L +
Sbjct: 124 SLCALEQLTEL-YMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNM 182

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           K  ++  ++P  +   KS+  L +   K F ++PD +  LE L  L +K  A+  +P+ +
Sbjct: 183 K-YNALTAIPDEIGKLKSMKILNLRSNK-FAKIPDSLCALEQLTELNMKSNALTSIPDEI 240

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
            +L S++ L LS N ++ IP+SL  L  L  L +  N L  IP+ +  L S+K L+L  N
Sbjct: 241 SKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSN 300

Query: 584 NLDRIPE 590
              +IP+
Sbjct: 301 KFAKIPD 307



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 167/390 (42%), Gaps = 97/390 (24%)

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLI-YSCKRLENISSSIFKLQFLESIRIHRC 238
           CH    L L    IE++P S+  L  + EL + Y+   L  I   I KL+          
Sbjct: 13  CHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNA--LTAIPDEISKLK---------- 60

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFER 298
            N++ L + S  I                       +P   C  + LT L  ++      
Sbjct: 61  -NMKILNLSSNKI---------------------AKIPDSLCALEQLTEL-YMEYNALTA 97

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +PDE+G L++LN L ++   I ++P+ L  L  L++L +     L  I  +I KLKS++ 
Sbjct: 98  IPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQLTELYM-GSDALTAIPDAIGKLKSMK- 155

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
                                          +LKL++ +++E +P SLC  + LT L  +
Sbjct: 156 -------------------------------ILKLDE-NEIEKIPDSLCALEQLTELN-M 182

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLY 477
               L  +PDE+G L++++ L +      ++P SL  L  L++L +K             
Sbjct: 183 KYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMK------------- 229

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
            S +LTS           +PDEI  L+ +K L +    I ++P+SL  L  L  L +  N
Sbjct: 230 -SNALTS-----------IPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYN 277

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            L  IP+ + +L S+  L L +N   +IP+
Sbjct: 278 ALTAIPDEIGKLKSMKILNLKSNKFAKIPD 307



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 16/120 (13%)

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           VP+ +G+   L+ L LS N ++ IPESL  L  L  L +  N L  IP+ +  L ++K L
Sbjct: 6   VPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNMKIL 65

Query: 579 DLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDPNELSEI 626
           +L  N + +IP+ L +              T+IP E   L+      N LKL+ N++++I
Sbjct: 66  NLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLK----SLNILKLNNNKIAKI 121


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 180/390 (46%), Gaps = 43/390 (11%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           E LP        L  L + +  + + LPD +  L+ L  L + G  +  LP  +GQL  L
Sbjct: 36  EGLPDRLWELTDLEELHL-EKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHL 94

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE--------IPFCNIDGSGIE 384
             L++ N  E +     + +L+ ++ + + N  +L   PE        +    ++G+ + 
Sbjct: 95  ESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNL-HLGQVPEDILKWLLNLEILGLNGNQLV 153

Query: 385 RIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALE 437
            +P   ++LNK  +L        +LP  +C   +LT+L++ +  KL  LP+E+  L  L+
Sbjct: 154 DLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDL-EGNKLHDLPNEIVQLVNLQ 212

Query: 438 ELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FM 494
           E+ ++      +P  L  L  ++ L+L      E  P    ++K    L  ++  N    
Sbjct: 213 EVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAK----LREVNFSNNKIE 268

Query: 495 RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
           +LP E+G L  L+VL  K   ++ +P++ G+L  L ++  + N  + +P SL  L +L  
Sbjct: 269 KLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAV 328

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP---------------TSI 599
           L + +NNL  IP+ +  L  LK L L  N  ++ PE + + P               TS+
Sbjct: 329 LAMDDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEAICNLPSLEKLFLGQDHGQQLTSV 388

Query: 600 PSEFTSLRLSVDL---RNCLKLDPNELSEI 626
           PS  + L    DL    N L   P+ +S++
Sbjct: 389 PSTISKLTSLQDLCLEYNALTTLPDSISQL 418



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 201/475 (42%), Gaps = 115/475 (24%)

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           ++ELP +IK L N+  L ++    LE +   + +L  LES+ +   P  +   +P  ++ 
Sbjct: 58  LKELPDNIKLLKNLTTLYLHG-NDLETLPPEVGQLGHLESLDVSNNPEFK---IPLEHL- 112

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQC---MFKSLTSLEI--------IDCP------- 294
                     +L+  K  R  +L  GQ    + K L +LEI        +D P       
Sbjct: 113 ---------LQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLPIYTVRLN 163

Query: 295 ----------NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE 344
                     NF  LP  + +L AL  L ++G  + +LP  + QL  L ++         
Sbjct: 164 KLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEV--------- 214

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
           Y+ ++ F    V+   + N + L+         + G+ ++ IP  + +L K  ++     
Sbjct: 215 YLQNNFFHHLPVQLCALGNIAVLE---------LHGNHVKEIPPDICRLAKLREVN---- 261

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLK 464
                            K+E+LP E+G L  LE L  +   ++ +PK+  +L   +    
Sbjct: 262 -------------FSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDF 308

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES-- 522
             + FE +P  L +  +L  L + D  N   +P E+ NL  LK L + G    + PE+  
Sbjct: 309 AQNRFEEMPVSLCMLGNLAVLAM-DDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEAIC 367

Query: 523 ---------LGQ---------------LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
                    LGQ               L+SL+ L L  N L  +P+S++QL +L  L   
Sbjct: 368 NLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCH 427

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR 613
           +N L+++P+ +  L +LKYL L  N L           T++PS+F  L    +LR
Sbjct: 428 DNYLQKLPDSICELKALKYLYLHNNLL-----------TALPSDFDFLTTLKELR 471



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 200/451 (44%), Gaps = 52/451 (11%)

Query: 143 DRCKSLTSLPT-SIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIK 201
           DR   LT L    +   +LK L      N+K L  +T+ +L       G  +E LP  + 
Sbjct: 40  DRLWELTDLEELHLEKNHLKEL----PDNIKLLKNLTTLYLH------GNDLETLPPEVG 89

Query: 202 CLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS-----------CN 250
            L ++  L + +    +     + +L+ L+ +R+H   NL   ++P              
Sbjct: 90  QLGHLESLDVSNNPEFKIPLEHLLQLRQLKVLRLH---NLHLGQVPEDILKWLLNLEILG 146

Query: 251 IDGTRSKEQPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLEIIDCPNFERLPDEL 303
           ++G +  + P   ++L K            +LP   C   +LT+L++ +      LP+E+
Sbjct: 147 LNGNQLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDL-EGNKLHDLPNEI 205

Query: 304 GNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
             L  L  + +       LP  L  L  ++ LEL + + ++ I   I +L  +  +  SN
Sbjct: 206 VQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLEL-HGNHVKEIPPDICRLAKLREVNFSN 264

Query: 364 CSNLKGFPEI-PFCNID-----GSGIERIPSSVLKLNKC-------SKLESLPSSLCMFK 410
               K   E+    N++      + ++ +P +  +L +        ++ E +P SLCM  
Sbjct: 265 NKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLG 324

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKK--CS 467
           +L  L + D   L  +P E+ NL  L+EL + G    + P+++  L +L KL L +    
Sbjct: 325 NLAVLAM-DDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEAICNLPSLEKLFLGQDHGQ 383

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
              S+PS +    SL  L  ++      LPD I  L  L  L+     ++++P+S+ +L 
Sbjct: 384 QLTSVPSTISKLTSLQDL-CLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELK 442

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           +L++L L +N L  +P   + L++L  L++ 
Sbjct: 443 ALKYLYLHNNLLTALPSDFDFLTTLKELRID 473



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 3/169 (1%)

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKS 481
           LE LPD L  L  LEEL +E   ++E+P ++  L  L+ L L   +  E+LP  +     
Sbjct: 35  LEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHG-NDLETLPPEVGQLGH 93

Query: 482 LTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES-LGQLSSLEWLVLSDNNLQ 540
           L SL++ +   F    + +  L  LKVL +    + +VPE  L  L +LE L L+ N L 
Sbjct: 94  LESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLV 153

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
            +P    +L+ L  L L NNN   +P  +  LS+L  LDL  N L  +P
Sbjct: 154 DLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLP 202


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 193/433 (44%), Gaps = 73/433 (16%)

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQF 243
           +TL L  +G+ E+P S+  L+++  L + S   L +I SS+  L  L  + +       F
Sbjct: 23  TTLDLSSLGLSEIPESLSDLTHLARLDL-SENNLSDIPSSLRDLPALTELNLRA----NF 77

Query: 244 LEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC--PNFERLPD 301
           LE  S  +                                 L +LE++D       + PD
Sbjct: 78  LETVSDTL-------------------------------GDLVTLEVLDLRENGLSQAPD 106

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI-- 359
            LGNL AL  L +    +  LP+ L  L  L++L   N S L  ++   F    + ++  
Sbjct: 107 SLGNLIALTELNLSENYLSALPDTLKNLTALTRL---NLSSLGMLAPEFFPTLGLTTLPE 163

Query: 360 ---------EISNCSN-LKGFPEI-------PFCNIDGSGIERIPSSVLKLNKCSKLE-- 400
                    E+   SN L   PE+          N+ G+ +  +P ++  L   +KL   
Sbjct: 164 WLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLY 223

Query: 401 -----SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
                +LP +L     LT L++    +L  LPD LGNL +L  L + G  +  +P++L  
Sbjct: 224 GNQLTALPETLGNLTDLTELDL-SSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLGN 282

Query: 456 LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEYLKVLTIKG 513
           L  L++L L   +   +LP  L     LT+   I   N +  +P+ +G++  L +L + G
Sbjct: 283 LTNLTELDLS-SNRLTTLPEVLGNLTDLTT--FIAHDNLLTAVPEWLGDITDLTLLGLSG 339

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             +  +P++LG L+SL  L L  N L  +PE+L  L+ L  L+L NN L  +PE L  L 
Sbjct: 340 NRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDLP 399

Query: 574 SLKYLDLFENNLD 586
            L +++L  N +D
Sbjct: 400 DLTWINLSGNPID 412



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 44/326 (13%)

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           +C+    T+L++        +P+ L +L  L RL +    + ++P  L  L  L++L L+
Sbjct: 16  RCLRDGSTTLDLSSL-GLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLR 74

Query: 339 NCSELEYISSSIFKLKSVESIEI---------SNCSNLKGFPEIPFCNIDGSGIERIPSS 389
             + LE +S ++  L ++E +++          +  NL    E+   N+  + +  +P +
Sbjct: 75  -ANFLETVSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTEL---NLSENYLSALPDT 130

Query: 390 VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREV 449
           +  L   ++L    SSL M       E      L  LP+ LGNL  L EL +    +  +
Sbjct: 131 LKNLTALTRLNL--SSLGMLAP----EFFPTLGLTTLPEWLGNLTDLTELDLSSNRLTAL 184

Query: 450 PKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
           P+ L  L    L     +   +LP                        D +GNL  L  L
Sbjct: 185 PEVLGNLTDLTLLNLSGNRLTTLP------------------------DTLGNLASLTKL 220

Query: 510 TIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERL 569
           ++ G  +  +PE+LG L+ L  L LS N L  +P++L  L+SL  L L  N L  +PE L
Sbjct: 221 SLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETL 280

Query: 570 DPLSSLKYLDLFENNLDRIPEYLRSF 595
             L++L  LDL  N L  +PE L + 
Sbjct: 281 GNLTNLTELDLSSNRLTTLPEVLGNL 306



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 41/269 (15%)

Query: 382 GIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLT--------------------S 414
           G+  IP S+  L   ++L+        +PSSL    +LT                    +
Sbjct: 31  GLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVT 90

Query: 415 LEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCS---- 467
           LE++D ++  L + PD LGNL AL EL +    +  +P +L  L AL++L L        
Sbjct: 91  LEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAP 150

Query: 468 ------SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE 521
                    +LP  L     LT L++        LP+ +GNL  L +L + G  +  +P+
Sbjct: 151 EFFPTLGLTTLPEWLGNLTDLTELDL-SSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPD 209

Query: 522 SLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLF 581
           +LG L+SL  L L  N L  +PE+L  L+ L  L LS+N L  +P+ L  L+SL  L L+
Sbjct: 210 TLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLY 269

Query: 582 ENNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
            N L  +PE L +       + +S RL+ 
Sbjct: 270 GNQLTALPETLGNLTNLTELDLSSNRLTT 298



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 164/396 (41%), Gaps = 82/396 (20%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           +++L +L  ++L+ + L T    L     LE+LDL   + L++   S+  L  L  L+L 
Sbjct: 62  LRDLPALTELNLRANFLETVSDTLGDLVTLEVLDL-RENGLSQAPDSLGNLIALTELNLS 120

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLG------VGIEELP 197
               L++LP +                LKNL  +T  +L S+L +L       +G+  LP
Sbjct: 121 E-NYLSALPDT----------------LKNLTALTRLNL-SSLGMLAPEFFPTLGLTTLP 162

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL--QFLEMPSCNIDGTR 255
             +  L+++ EL                    L S R+   P +     ++   N+ G R
Sbjct: 163 EWLGNLTDLTEL-------------------DLSSNRLTALPEVLGNLTDLTLLNLSGNR 203

Query: 256 SKEQPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQA 308
               P +   L    +         +LP        LT L+ +       LPD LGNL +
Sbjct: 204 LTTLPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELD-LSSNRLTTLPDTLGNLAS 262

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L  L + G  +  LPE LG L         N +EL+  S+ +  L  V    + N ++L 
Sbjct: 263 LTMLSLYGNQLTALPETLGNLT--------NLTELDLSSNRLTTLPEV----LGNLTDLT 310

Query: 369 GFPEIPFCNIDGSGIERIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC 420
            F  I   N+    +  +P         ++L L   ++L +LP +L    SLT L +   
Sbjct: 311 TF--IAHDNL----LTAVPEWLGDITDLTLLGL-SGNRLTTLPDTLGNLTSLTMLSLY-G 362

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
            +L  LP+ LGNL  L +L +    +  +P+SL  L
Sbjct: 363 NQLTALPETLGNLTDLTDLELWNNRLTALPESLGDL 398


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 184/349 (52%), Gaps = 41/349 (11%)

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P  L  L+ L  L +    I+ LP+G+  L  L  L+++  S ++ +   I +L+++  +
Sbjct: 73  PKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVD-LPGKIVRLRNLTQL 131

Query: 360 EISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSS 405
            I+N + +K  PE       +      G+ ++++P+S   L K        ++LES+  S
Sbjct: 132 NIAN-NKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESV--S 188

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLK 464
           L  +K+L SL+I    +L ++PD LG+L+ L  L ++   + ++P+ +  L+ L +L L 
Sbjct: 189 LGKYKNLQSLDI-SRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLN 247

Query: 465 KCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           + +  + LP  L    SL  L+++  ++   + LP++IG L  LKVL++    +R +PES
Sbjct: 248 E-NKIKQLPKELT---SLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPES 303

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           +G L+ L  L LS+N L+++P SL  ++SL S+ +  NNL+ +P+ +  L  ++ +   +
Sbjct: 304 IGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSISQLKKIERIYASQ 363

Query: 583 NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGW 631
           N +  +P  L        +E T L+        L +  N L+EI  + W
Sbjct: 364 NQISLLPVEL--------AELTQLK-------SLAISGNLLTEIPSELW 397



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 214/486 (44%), Gaps = 114/486 (23%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           L+IL L Y +++      I  L  LEVLD+ R  SL  LP  I               L+
Sbjct: 82  LKILRL-YNNNIKHLPQGIDSLKSLEVLDIQR-NSLVDLPGKI-------------VRLR 126

Query: 173 NLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS--CKRLENISSSIFKLQFL 230
           NL ++   + +         ++ELP +I  L  +     Y    K+L    SS+ KL+ L
Sbjct: 127 NLTQLNIANNK---------VKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESL 177

Query: 231 -------ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
                  ES+ + +  NLQ L++               S  +L K P  ++L S     K
Sbjct: 178 GLGKNQLESVSLGKYKNLQSLDI---------------SRNRLTKIP--DNLGS----LK 216

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            LTSL  +   N  +LP+++G L  L RL ++   I++LP+ L  L  L  ++L++   L
Sbjct: 217 KLTSL-FLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLL 275

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
           E + + I KL  ++ + + +  NL                               L +LP
Sbjct: 276 E-LPNDIGKLSQLKVLSLHH--NL-------------------------------LRALP 301

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
            S+     L +L++ +  +LE LP  LGN+ +L+ + V    ++ +PKS++QL       
Sbjct: 302 ESIGNLTLLPTLQLSN-NRLELLPSSLGNMASLKSIWVRKNNLQTLPKSISQL------- 353

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           KK         R+Y S++  SL          LP E+  L  LK L I G  + E+P  L
Sbjct: 354 KKIE-------RIYASQNQISL----------LPVELAELTQLKSLAISGNLLTEIPSEL 396

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             L  L +L  S N +  +P  ++ L SL  L LS+N L  +P  +  L +L+ L L  N
Sbjct: 397 WGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNN 456

Query: 584 NLDRIP 589
            L ++P
Sbjct: 457 QLAKLP 462



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 57/97 (58%)

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +  L   + N   ++ L +    ++++P+++  L +LE L L +N L + P+ L QL  L
Sbjct: 23  YSNLDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKL 82

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             L+L NNN++ +P+ +D L SL+ LD+  N+L  +P
Sbjct: 83  KILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLP 119


>gi|39104560|dbj|BAC41800.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 977

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           +SKI + + I+   F++M  L+ L F    +  ++  +E +P   LR   W  +P K+L 
Sbjct: 398 ISKIET-LSISKRAFNRMRNLKFLNFYNG-SVSLLEDMEYLP--RLRLLYWGSYPRKSLP 453

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L M  SK+ +LW  +Q L +LK+I+L YS  L ++P+LS A NL+ L L 
Sbjct: 454 LTFKPECLVELYMGFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLT 513

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI  L KLE+L    C  L  +PT+I+   L+ + +  CS L++ P ++S
Sbjct: 514 GCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLRSFPDISS 573

Query: 180 CHLRSTLPLLGVGIEELPSSIK---CLSNIGELLIYSCKRLENISSSIFKLQFLES 232
              R  L + G  I+E P+SI    C  +  ++   S KRL ++  S+  L    S
Sbjct: 574 NIKR--LYVAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLDLRNS 627



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 135/317 (42%), Gaps = 63/317 (19%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L   S L+ +P+ L    +L +L +  C+ L  +P  + NL+ LE L   G       
Sbjct: 487 INLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSIWNLQKLEMLYASG------- 538

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          C   + +P+ + ++ SL  + + +C      PD   N+   K L 
Sbjct: 539 ---------------CIKLQVIPTNINLA-SLEEVNMSNCSRLRSFPDISSNI---KRLY 579

Query: 511 IKGTAIREVPESL-GQLSSLEWLVLSDNNLQ---IIPESLNQLSSLVSLKLSNNNLERIP 566
           + GT I+E P S+ G    L++L +   +L+    +PES+  L       L N++++ IP
Sbjct: 580 VAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLD------LRNSDIKMIP 633

Query: 567 ERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSLRL----------SVDLRN 614
           + +  L  L  L L EN   L  I  +  S  T       SL+            +   N
Sbjct: 634 DCVIGLPHLVSL-LVENCTKLVSIQGHSPSLVTLFADHCISLKSVCCSFHGPISKLMFYN 692

Query: 615 CLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--TISLKTPQ 672
           CLKLD        K G ++QS N      KS+  PG EIP  F HQ+ G+  TISL    
Sbjct: 693 CLKLDKES-----KRGIIQQSGN------KSICLPGKEIPAEFTHQTIGNLITISLAPGC 741

Query: 673 PTGYNKLMGFAFCVVVA 689
              Y+    F  C++++
Sbjct: 742 EEAYSTFSRFKACLLLS 758



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           E L  G     +L  + +    N + +P+ L     L  L + G  ++ E+P  +  L  
Sbjct: 472 EKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSIWNLQK 530

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIP 387
           L  L    C +L+ I ++I  L S+E + +SNCS L+ FP+I        + G+ I+  P
Sbjct: 531 LEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDISSNIKRLYVAGTMIKEFP 589

Query: 388 SSVL 391
           +S++
Sbjct: 590 ASIV 593


>gi|15237516|ref|NP_198907.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007232|gb|AED94615.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1104

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
           +SKI + + I+   F++M  L+ L F    +  ++  +E +P   LR   W  +P K+L 
Sbjct: 525 ISKIET-LSISKRAFNRMRNLKFLNFYNG-SVSLLEDMEYLP--RLRLLYWGSYPRKSLP 580

Query: 61  I-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLG 119
           +    E LV L M  SK+ +LW  +Q L +LK+I+L YS  L ++P+LS A NL+ L L 
Sbjct: 581 LTFKPECLVELYMGFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLT 640

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            C SL E  SSI  L KLE+L    C  L  +PT+I+   L+ + +  CS L++ P ++S
Sbjct: 641 GCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLRSFPDISS 700

Query: 180 CHLRSTLPLLGVGIEELPSSIK---CLSNIGELLIYSCKRLENISSSIFKLQFLES 232
              R  L + G  I+E P+SI    C  +  ++   S KRL ++  S+  L    S
Sbjct: 701 NIKR--LYVAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLDLRNS 754



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 135/317 (42%), Gaps = 63/317 (19%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
           + L   S L+ +P+ L    +L +L +  C+ L  +P  + NL+ LE L   G       
Sbjct: 614 INLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSIWNLQKLEMLYASG------- 665

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                          C   + +P+ + ++ SL  + + +C      PD   N+   K L 
Sbjct: 666 ---------------CIKLQVIPTNINLA-SLEEVNMSNCSRLRSFPDISSNI---KRLY 706

Query: 511 IKGTAIREVPESL-GQLSSLEWLVLSDNNLQ---IIPESLNQLSSLVSLKLSNNNLERIP 566
           + GT I+E P S+ G    L++L +   +L+    +PES+  L       L N++++ IP
Sbjct: 707 VAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESVTHLD------LRNSDIKMIP 760

Query: 567 ERLDPLSSLKYLDLFEN--NLDRIPEYLRSFPTSIPSEFTSLRL----------SVDLRN 614
           + +  L  L  L L EN   L  I  +  S  T       SL+            +   N
Sbjct: 761 DCVIGLPHLVSL-LVENCTKLVSIQGHSPSLVTLFADHCISLKSVCCSFHGPISKLMFYN 819

Query: 615 CLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGS--TISLKTPQ 672
           CLKLD        K G ++QS N      KS+  PG EIP  F HQ+ G+  TISL    
Sbjct: 820 CLKLDKES-----KRGIIQQSGN------KSICLPGKEIPAEFTHQTIGNLITISLAPGC 868

Query: 673 PTGYNKLMGFAFCVVVA 689
              Y+    F  C++++
Sbjct: 869 EEAYSTFSRFKACLLLS 885



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           E L  G     +L  + +    N + +P+ L     L  L + G  ++ E+P  +  L  
Sbjct: 599 EKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSIWNLQK 657

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF----CNIDGSGIERIP 387
           L  L    C +L+ I ++I  L S+E + +SNCS L+ FP+I        + G+ I+  P
Sbjct: 658 LEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDISSNIKRLYVAGTMIKEFP 716

Query: 388 SSVL 391
           +S++
Sbjct: 717 ASIV 720


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 169/332 (50%), Gaps = 26/332 (7%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAI 319
           SE KLK  P+      GQ     L +L++++  N     LP E+G LQ L  L + G  +
Sbjct: 54  SEQKLKTLPKE----IGQ-----LQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQL 104

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
              P+ +GQL  L  L L + + L  +   I +LK++  + + N +    FP+       
Sbjct: 105 TTFPKEIGQLKNLQTLVL-SKNRLTTLPKEIGQLKNLRELYL-NTNQFTAFPK------- 155

Query: 380 GSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
              I ++  ++ +LN   ++L++LP+ +   ++L  L +    +L+ L  E+G L+ L+ 
Sbjct: 156 --EIGQL-KNLQQLNLYANQLKTLPNEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQV 211

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           L +    ++ +PK + QL   ++     + F+++P  +   K+L  L++     F  +P+
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDL-GYNQFKTVPE 270

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           EIG L+ L++L +     + VPE  GQL +L+ L L+ N L  +P  + QL +L  L LS
Sbjct: 271 EIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS 330

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            N L+ +   +  L +LK L L +N L  +P+
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPK 362



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 144/280 (51%), Gaps = 19/280 (6%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ LP+ +GQL  L  LEL N ++L  +   I +L++++ + +S  + L  FP+      
Sbjct: 58  LKTLPKEIGQLQNLQVLELNN-NQLATLPKEIGQLQNLQELHLS-GNQLTTFPK------ 109

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           +   ++ + + VL  N+ +   +LP  +   K+L  L  ++  +    P E+G L+ L++
Sbjct: 110 EIGQLKNLQTLVLSKNRLT---TLPKEIGQLKNLREL-YLNTNQFTAFPKEIGQLKNLQQ 165

Query: 439 LRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMR 495
           L +    ++ +P  + QL  L +L L    S+  L +       L +L+++D  +     
Sbjct: 166 LNLYANQLKTLPNEIGQLQNLRELHL----SYNQLKTLSAEIGQLQNLQVLDLNDNQLKT 221

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L++L +     + VPE +GQL +L+ L L  N  + +PE + QL +L  L
Sbjct: 222 LPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQML 281

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
            L+NN  + +PE    L +L+ L L  N L  +P  +R  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 165/395 (41%), Gaps = 100/395 (25%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL------------GYCSSLT 125
           T L   ++N + ++ +DL   KL T   ++   QNL++L+L            G   +L 
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95

Query: 126 ETHSS----------IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           E H S          I  L  L+ L L + + LT+LP  I   K L+ L L   +     
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNR-LTTLPKEIGQLKNLRELYL-NTNQFTAF 153

Query: 175 PK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           PK +        L L    ++ LP+ I  L N+ EL + S  +L+ +S+ I +LQ L+ +
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQVL 212

Query: 234 ------------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
                        I +  NLQ L++ +                       PE +  GQ  
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTV-----------------PEEI--GQ-- 251

Query: 282 FKSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              L +L+++D     F+ +P+E+G L+ L  L ++    + +PE  GQL  L  L L N
Sbjct: 252 ---LKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSL-N 307

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            ++L  + + I +LK++  + +S                                  ++L
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLS---------------------------------YNQL 334

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           ++L + +   K+L  L + D  +L+ LP E+G L+
Sbjct: 335 KTLSAEIGQLKNLKKLSLRD-NQLKTLPKEIGQLQ 368


>gi|195057941|ref|XP_001995353.1| GH23114 [Drosophila grimshawi]
 gi|193899559|gb|EDV98425.1| GH23114 [Drosophila grimshawi]
          Length = 340

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 6/190 (3%)

Query: 402 LPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKL 461
           LP+ +   +SL  L  ++  KL ++P  LGNL  L+ L ++   + E P  + +L   K 
Sbjct: 38  LPAIIEHCESLMKL-FLNQNKLTKVPGSLGNLTRLQVLALDYNHLDEFPACICELVRLKF 96

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREV 519
               C+    LP+ L     LT+LE   C N    RLP EIGN E L+ L ++G  ++ +
Sbjct: 97  LNVSCNEIHCLPAEL---GHLTALETFWCNNTGLRRLPPEIGNCERLQTLGVRGNRLQSL 153

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           P+S+GQL+ L WL   +N L  +P++   L  L+ L L  N L R+P  L  + +LK++ 
Sbjct: 154 PDSIGQLAELRWLTAENNRLGEVPQTFGCLQHLIHLNLKGNQLRRLPAMLMSMPNLKFVF 213

Query: 580 LFENNLDRIP 589
           L  N +D++P
Sbjct: 214 LNVNRIDQMP 223



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 34/222 (15%)

Query: 378 IDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
           ++ + + ++P S+  L +        + L+  P+ +C    L  L +  C ++  LP EL
Sbjct: 53  LNQNKLTKVPGSLGNLTRLQVLALDYNHLDEFPACICELVRLKFLNV-SCNEIHCLPAEL 111

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           G+L ALE      TG+R +P  +            C   ++L  R               
Sbjct: 112 GHLTALETFWCNNTGLRRLPPEIG----------NCERLQTLGVR--------------G 147

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
                LPD IG L  L+ LT +   + EVP++ G L  L  L L  N L+ +P  L  + 
Sbjct: 148 NRLQSLPDSIGQLAELRWLTAENNRLGEVPQTFGCLQHLIHLNLKGNQLRRLPAMLMSMP 207

Query: 551 SLVSLKLSNNNLERIP--ERLDPLSSLKYLDLFENNLDRIPE 590
           +L  + L+ N ++++P    L+ L  L+ L+L +N +   PE
Sbjct: 208 NLKFVFLNVNRIDQMPSEAELEMLHFLRMLNLTQNPISIQPE 249



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 9/114 (7%)

Query: 285 LTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           LT+LE   C N    RLP E+GN + L  L + G  ++ LP+ +GQLA L  L  +N + 
Sbjct: 114 LTALETFWCNNTGLRRLPPEIGNCERLQTLGVRGNRLQSLPDSIGQLAELRWLTAEN-NR 172

Query: 343 LEYISSSIFKLKSVESIEISNC------SNLKGFPEIPFCNIDGSGIERIPSSV 390
           L  +  +   L+ +  + +         + L   P + F  ++ + I+++PS  
Sbjct: 173 LGEVPQTFGCLQHLIHLNLKGNQLRRLPAMLMSMPNLKFVFLNVNRIDQMPSEA 226


>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
 gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
          Length = 2303

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 284/637 (44%), Gaps = 128/637 (20%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           +   + LV L   G+++  L +++  L  ++ + LK +++     D++    +  LDL  
Sbjct: 350 VYQAQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSE 409

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            + L   H SI  +  +E LDL + + +  +P  I   +L+RL                 
Sbjct: 410 -NRLNGIHPSILEMRHMESLDLSKNR-VIKIPREI--SHLRRL----------------- 448

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC-- 238
               TL L G  + E+   +  + ++ EL I    R+  IS  + KL+ L+++ +  C  
Sbjct: 449 ---QTLKLRGTDLREVNEELFTIDDLRELDIGQNPRMF-ISEKVSKLRCLKTLSLDGCRL 504

Query: 239 ----------PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP--ESLPS---GQCMFK 283
                     PNL+ L++   +I    +  +   +LK+ +  R   +S+P    G C  +
Sbjct: 505 SGLPRELFELPNLEVLDISDNDIRTIPTAIENLKKLKVLRANRLFLDSVPYSILGLCKLR 564

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
            L     +     +++ + +  L+ L  L +    IR +P  LG+++ L  + +    E 
Sbjct: 565 CL----FLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNV----ER 616

Query: 344 EYIS--SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
            +++  + I +LK +E++                 NI  +G+  +P ++++L++      
Sbjct: 617 NWVTDLTPICRLKYLETL-----------------NIGSNGLYSLPGNLVELSQLKHLRA 659

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIREVPKS 452
             ++L SLP     F  L+ L+++D  K  +E LPD   +L AL  LR+    +   P  
Sbjct: 660 SHNRLTSLPEQ---FGKLSRLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTE 716

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE----IGNLEYLK 507
           +  +  L+ + L   +   SLP  + + +++ +L +   KN  +LPD+    I  +  LK
Sbjct: 717 VCGINTLTDIDLS-SNKIPSLPFGVGLLENVEALNL--SKN--KLPDDMHDFISQMTSLK 771

Query: 508 VLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP- 566
            L +  T + +VPE++ +L  LE+L +S N LQ IP  + +L  L  L  S+N L+ +P 
Sbjct: 772 HLDLSQTGMTKVPETISRLEELEYLNISSNKLQYIPSEMFELPFLEELDASDNVLKELPV 831

Query: 567 --------ERL--------------DPLSSLKYLDLFENNLDRIPEYLRSFP-------- 596
                   ERL              + L  L+ LDL  NNL  +PE L   P        
Sbjct: 832 DAVQESDVERLLLGGNHLDELSRNINTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLS 891

Query: 597 ----TSIPSEFTSLRLSV-DLR-NCLKLDPNELSEII 627
                  P EF+ L L V DL  N L+  P E+++++
Sbjct: 892 GNRLRHFPPEFSGLMLEVLDLSDNGLRFVPREVTDML 928



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 262/592 (44%), Gaps = 90/592 (15%)

Query: 58  TLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           ++ +   E++ SL +  + +T + DD++NL +LK ++L  ++++ +   LS  + L  LD
Sbjct: 50  SVGVCKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIV-EYSFLSKLRTLVELD 108

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           L    +L      +  ++ LE+L +     +T +P SI      R++    + + + P  
Sbjct: 109 LSN-QNLRSIPEEVFNIHSLEILRVAN-NGITEIPKSILKLKGLRILDVSGNRISSFPIS 166

Query: 178 TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR 237
           T   L+  L +  V ++ +P  +  L  + E+L  S  +++ +   + KL  L  +++  
Sbjct: 167 TLGTLKE-LYISRVQLQTIPEEVFALEEL-EVLDISNNKVKYLPVKLGKLYRLRVLKLGG 224

Query: 238 CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN-- 295
                F  MP+        +E   S+++LK  P+       +  +  LT+L+ +   N  
Sbjct: 225 NNVCSFEVMPALQC----LEELDLSDMRLKSIPK-------EAFY--LTNLKTLKLNNNK 271

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              +P ++    AL  L++D   I  + E L ++  L  L L N +    ++ S F +  
Sbjct: 272 IRTIPADIERPMALQTLLLDNNKISSVSEVLDKMKFLRHLSLSNNN----LTDSGFPVDD 327

Query: 356 VESIEISNCSNLKG--FPEIPFC----------NIDGSGIERIPSSV----------LKL 393
           V+ I + +  NL G     IP C          + +G+ I  +P  +          LK 
Sbjct: 328 VDIISLEHL-NLDGNKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKN 386

Query: 394 NKCSKLESLPSSLCMFKSLTSLE---------IIDCKKLE----------RLPDELGNLE 434
           N+  ++    + LC  + L   E         I++ + +E          ++P E+ +L 
Sbjct: 387 NRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMRHMESLDLSKNRVIKIPREISHLR 446

Query: 435 ALEELRVEGTGIREV------------------PKSLAQLALSKLKLKKCSSFE-----S 471
            L+ L++ GT +REV                  P+      +SKL+  K  S +      
Sbjct: 447 RLQTLKLRGTDLREVNEELFTIDDLRELDIGQNPRMFISEKVSKLRCLKTLSLDGCRLSG 506

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
           LP  L+   +L  L+I D  +   +P  I NL+ LKVL      +  VP S+  L  L  
Sbjct: 507 LPRELFELPNLEVLDISD-NDIRTIPTAIENLKKLKVLRANRLFLDSVPYSILGLCKLRC 565

Query: 532 LVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           L L  N +Q I ES++ L  L  L LS+N + RIP +L  +S+L+ +++  N
Sbjct: 566 LFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVERN 617



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 164/682 (24%), Positives = 305/682 (44%), Gaps = 108/682 (15%)

Query: 1    MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLN 60
            +S   + I++ P   + + ++R+LK   ++ + +   +      E+R+ +  +  L  ++
Sbjct: 359  LSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDV--AELCEIRHLDLSENRLNGIH 416

Query: 61   --ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL---------LTKLPDLSL 109
              IL   ++ SL +  ++V ++  ++ +L  L+ + L+ + L         +  L +L +
Sbjct: 417  PSILEMRHMESLDLSKNRVIKIPREISHLRRLQTLKLRGTDLREVNEELFTIDDLRELDI 476

Query: 110  AQN--------------LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSI 155
             QN              L+ L L  C  L+     +  L  LEVLD+     + ++PT+I
Sbjct: 477  GQNPRMFISEKVSKLRCLKTLSLDGCR-LSGLPRELFELPNLEVLDISD-NDIRTIPTAI 534

Query: 156  HSKYLKRL-VLRGCS-NLKNLPK--MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
             +  LK+L VLR     L ++P   +  C LR  L L G  I+++  SI  L  + ++L 
Sbjct: 535  EN--LKKLKVLRANRLFLDSVPYSILGLCKLR-CLFLQGNRIQKISESISMLKEL-QVLD 590

Query: 212  YSCKRLENISSSIFKLQFLESIRIHR------CP--NLQFLEMPSCNIDGTRSKEQPSSE 263
             S  ++  I + + ++  L+S+ + R       P   L++LE  +   +G  S      E
Sbjct: 591  LSDNKIRRIPAQLGEISTLQSVNVERNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVE 650

Query: 264  LKLKKCPRPE-----SLPSGQCMFKSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDG 316
            L   K  R       SLP     F  L+ L+++D    N E LPD   +L AL+ L +  
Sbjct: 651  LSQLKHLRASHNRLTSLPE---QFGKLSRLKVLDLTKNNIESLPDSFSSLNALSVLRLAS 707

Query: 317  TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN---------- 366
              +   P  +  +  L+ ++L +      I S  F +  +E++E  N S           
Sbjct: 708  NDMSSFPTEVCGINTLTDIDLSS----NKIPSLPFGVGLLENVEALNLSKNKLPDDMHDF 763

Query: 367  LKGFPEIPFCNIDGSGIERIPSSVLKLNK-------CSKLESLPSSLCMFKSLTSLEIID 419
            +     +   ++  +G+ ++P ++ +L +        +KL+ +PS +     L  L+  D
Sbjct: 764  ISQMTSLKHLDLSQTGMTKVPETISRLEELEYLNISSNKLQYIPSEMFELPFLEELDASD 823

Query: 420  CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYV 478
               L+ LP +      +E L + G  + E+ +++  L  L +L L + ++   LP  L  
Sbjct: 824  -NVLKELPVDAVQESDVERLLLGGNHLDELSRNINTLMYLERLDLSR-NNLRDLPESLSF 881

Query: 479  SKSLTSLEIIDCK-NFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
               L  LEI++   N +R  P E   L  L+VL +    +R VP  +  + SL+ L +S 
Sbjct: 882  ---LPCLEILNLSGNRLRHFPPEFSGL-MLEVLDLSDNGLRFVPREVTDMLSLQTLNISR 937

Query: 537  NNLQIIPESLNQLSSLVSLKLSNNNLERIPE---------RLDP--------------LS 573
            N +++I + + QL SLV L +S N++  IPE         RL                L 
Sbjct: 938  NRIKVIGDRMCQLDSLVDLDISRNSVTSIPENICLLANMERLTASHNNISSIIRDVCELP 997

Query: 574  SLKYLDLFENNLDRIPEYLRSF 595
            +L+YLDL  N L+++P  + S 
Sbjct: 998  NLEYLDLRHNQLEKVPTDIGSL 1019



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 127/555 (22%), Positives = 244/555 (43%), Gaps = 86/555 (15%)

Query: 65   ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
            ++LV L +  + VT + +++  L +++R+   ++ + + + D+    NLE LDL + + L
Sbjct: 951  DSLVDLDISRNSVTSIPENICLLANMERLTASHNNISSIIRDVCELPNLEYLDLRH-NQL 1009

Query: 125  TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN--LKNLPKMT--SC 180
             +  + I  L++L VL L   K   +  T+I       LVL   S   L ++P     S 
Sbjct: 1010 EKVPTDIGSLSQLRVLLLSGNK--IAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSA 1067

Query: 181  HLRSTLPLLGVGIEELPSSIKCLSNIGEL------LIYSCKR---LENISSSIFKLQFLE 231
             LR  L L    IE +P+ I   + + EL      +   C+    L N+         L 
Sbjct: 1068 SLR-VLKLNENKIEGVPTYISRATGLTELQLRGNRIFVVCREVSELHNLRKVDLSYNHLS 1126

Query: 232  SIRIHRC--PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
            ++ +  C   NL+ L++    I    S  Q     K+KK             F+++ +  
Sbjct: 1127 TLPLSICHMSNLEALDISHNRIYYLSSDVQ-----KMKKIR----------TFRAVGN-- 1169

Query: 290  IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSS 349
                    +LP+++  L  L  +++    I  LP  +    +   L   +C+ +  + SS
Sbjct: 1170 -----KIHQLPEQILKLDRLEHVVLHDNNINLLPSAMPPNVVTLDL---SCNGISRLGSS 1221

Query: 350  IFKLKSVESIEISN-----CSNLKG---FPEIPFCNIDGSGIERIPSSVLKLNKCSKLES 401
            + +++++E + +++     C  + G   FP +   N+  + I  +P+ +  L   + L++
Sbjct: 1222 LGQMQNLEVLNLADNRVDSCRGVFGPNTFPSLRVLNVRNNAIMALPN-IGHLRSLTSLDA 1280

Query: 402  LPSS------LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
              +S      LC    L  L+  D   +  +PDE+  LE +E L + G  + ++   L++
Sbjct: 1281 TANSISDLVDLCNASDLRVLKA-DNNLITEVPDEIAKLEHIELLSLSGNWLDDLSPHLSE 1339

Query: 456  LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
            L+ + +L    C   E                         +P E+G L  L+ + +K  
Sbjct: 1340 LSKIRRLVFNSCMLTE-------------------------VPPEVGELRTLRSIELKDN 1374

Query: 515  AIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
             + + P+ L  L  L  + L  N L IIP+ + +  SL  + LS NN+E +P  L  +++
Sbjct: 1375 ELADFPDVLLYLPHLANVALDGNKLDIIPDEVRRFESLKIMSLSRNNIETLPSTLCHVNN 1434

Query: 575  LKYLDLFENNLDRIP 589
            L++LD+ +N L  +P
Sbjct: 1435 LQWLDVRKNKLTTLP 1449



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 178/373 (47%), Gaps = 45/373 (12%)

Query: 274  SLPSGQCMFKSLTSLEIIDCPNFERLPDELGN----LQALNRLIIDGTAIRELPEGLGQL 329
            SLP G  + +++ +L +    +  +LPD++ +    + +L  L +  T + ++PE + +L
Sbjct: 735  SLPFGVGLLENVEALNL----SKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRL 790

Query: 330  ALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSS 389
              L  L + + ++L+YI S +F+L  +E ++ S+        E+P   +  S +ER+   
Sbjct: 791  EELEYLNI-SSNKLQYIPSEMFELPFLEELDASD----NVLKELPVDAVQESDVERLLLG 845

Query: 390  VLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK--LERLPDELGNLEALEELRVEGTGIR 447
               L++ S+            +L  LE +D  +  L  LP+ L  L  LE L + G  +R
Sbjct: 846  GNHLDELSR---------NINTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLR 896

Query: 448  EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMR-LPDEIGNLEYL 506
              P   + L L  L L   +    +P  +    SL +L I   +N ++ + D +  L+ L
Sbjct: 897  HFPPEFSGLMLEVLDLSD-NGLRFVPREVTDMLSLQTLNI--SRNRIKVIGDRMCQLDSL 953

Query: 507  KVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIP 566
              L I   ++  +PE++  L+++E L  S NN+  I   + +L +L  L L +N LE++P
Sbjct: 954  VDLDISRNSVTSIPENICLLANMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEKVP 1013

Query: 567  ERLDPLSSLKYLDLFENNLDRIP-------------EYLRSFPTSIPSEFTSLRLSVDLR 613
              +  LS L+ L L  N +  +              +  R+  TSIPS   S+  S  LR
Sbjct: 1014 TDIGSLSQLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSRNLLTSIPS---SVCQSASLR 1070

Query: 614  NCLKLDPNELSEI 626
              LKL+ N++  +
Sbjct: 1071 -VLKLNENKIEGV 1082



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 22/209 (10%)

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKL 463
           S L   ++L  L++ + + L  +P+E+ N+ +LE LRV   GI E+PKS+ +L   ++  
Sbjct: 96  SFLSKLRTLVELDLSN-QNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILD 154

Query: 464 KKCSSFESLP-------SRLYVSK-----------SLTSLEIIDCKN--FMRLPDEIGNL 503
              +   S P         LY+S+           +L  LE++D  N     LP ++G L
Sbjct: 155 VSGNRISSFPISTLGTLKELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKL 214

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
             L+VL + G  +    E +  L  LE L LSD  L+ IP+    L++L +LKL+NN + 
Sbjct: 215 YRLRVLKLGGNNVCSF-EVMPALQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIR 273

Query: 564 RIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            IP  ++   +L+ L L  N +  + E L
Sbjct: 274 TIPADIERPMALQTLLLDNNKISSVSEVL 302



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 162/375 (43%), Gaps = 69/375 (18%)

Query: 275 LPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSK 334
           L  G C  + + SL++        +PD++ NL+ L  L + G  I E    L +L  L +
Sbjct: 49  LSVGVCKMEDIQSLDL-RSNYLTSIPDDIENLRNLKVLNLSGNRIVEY-SFLSKLRTLVE 106

Query: 335 LELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----------FCNIDGSGIE 384
           L+L N   L  I   +F + S+E + ++N     G  EIP            ++ G+ I 
Sbjct: 107 LDLSN-QNLRSIPEEVFNIHSLEILRVAN----NGITEIPKSILKLKGLRILDVSGNRIS 161

Query: 385 RIPSSVLKLNK-----CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
             P S L   K       +L+++P  +   + L  L+I +  K++ LP +LG L  L  L
Sbjct: 162 SFPISTLGTLKELYISRVQLQTIPEEVFALEELEVLDISN-NKVKYLPVKLGKLYRLRVL 220

Query: 440 RVEGTGI---REVP--KSLAQLALSKLKLKKC-----------------SSFESLPSRLY 477
           ++ G  +     +P  + L +L LS ++LK                   +   ++P+ + 
Sbjct: 221 KLGGNNVCSFEVMPALQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIE 280

Query: 478 VSKSLTSL-----------EIIDCKNFMR-------------LPDEIGNLEYLKVLTIKG 513
              +L +L           E++D   F+R              P +  ++  L+ L + G
Sbjct: 281 RPMALQTLLLDNNKISSVSEVLDKMKFLRHLSLSNNNLTDSGFPVDDVDIISLEHLNLDG 340

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             +  +P  + Q   L  L    N ++++PE +  L  +  LKL NN + ++ + +  L 
Sbjct: 341 NKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDVAELC 400

Query: 574 SLKYLDLFENNLDRI 588
            +++LDL EN L+ I
Sbjct: 401 EIRHLDLSENRLNGI 415



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 187/437 (42%), Gaps = 66/437 (15%)

Query: 199 SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI--RIHRCPNLQFLEMPSCNIDGTR- 255
           S +CLS++    +  CK +E+I S   +  +L SI   I    NL+ L     N+ G R 
Sbjct: 42  SDRCLSHLS---VGVCK-MEDIQSLDLRSNYLTSIPDDIENLRNLKVL-----NLSGNRI 92

Query: 256 ------SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQ 307
                 SK +   EL L      ++L S      ++ SLEI+   N     +P  +  L+
Sbjct: 93  VEYSFLSKLRTLVELDLSN----QNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLK 148

Query: 308 ALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNL 367
            L  L + G  I   P  +  L  L +L +    +L+ I   +F L+ +E ++ISN    
Sbjct: 149 GLRILDVSGNRISSFP--ISTLGTLKELYISRV-QLQTIPEEVFALEELEVLDISNN--- 202

Query: 368 KGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
               ++ +  +    + R+    L  N     E +P+  C    L  L++ D + L+ +P
Sbjct: 203 ----KVKYLPVKLGKLYRLRVLKLGGNNVCSFEVMPALQC----LEELDLSDMR-LKSIP 253

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQ-LALSKLKL--KKCSSFESLPSRLYVSKSLT- 483
            E   L  L+ L++    IR +P  + + +AL  L L   K SS   +  ++   + L+ 
Sbjct: 254 KEAFYLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSEVLDKMKFLRHLSL 313

Query: 484 -------------SLEII-------DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
                         ++II       D      +P  +   + L  L+ +G  IR +PE +
Sbjct: 314 SNNNLTDSGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEI 373

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
             L  +  L L +N ++ + + + +L  +  L LS N L  I   +  +  ++ LDL +N
Sbjct: 374 AGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMRHMESLDLSKN 433

Query: 584 NLDRIPE---YLRSFPT 597
            + +IP    +LR   T
Sbjct: 434 RVIKIPREISHLRRLQT 450



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 187/448 (41%), Gaps = 87/448 (19%)

Query: 6    SEIQINPYTFSKMTELRLLKFCGSKNKCM---VHSLEGVPFTELRYFEWHQFPLKTLNIL 62
            ++I+  P   S+ T L  L+  G++   +   V  L  +   +L Y      PL   +I 
Sbjct: 1077 NKIEGVPTYISRATGLTELQLRGNRIFVVCREVSELHNLRKVDLSYNHLSTLPL---SIC 1133

Query: 63   HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCS 122
            H  NL +L +  +++  L  DVQ +  ++      +K + +LP+                
Sbjct: 1134 HMSNLEALDISHNRIYYLSSDVQKMKKIRTFRAVGNK-IHQLPE---------------- 1176

Query: 123  SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHL 182
                           ++L LDR               L+ +VL   +N+  LP     ++
Sbjct: 1177 ---------------QILKLDR---------------LEHVVLHD-NNINLLPSAMPPNV 1205

Query: 183  RSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
              TL L   GI  L SS+  + N+ E+L  +  R+++    +F      S+R+    N  
Sbjct: 1206 -VTLDLSCNGISRLGSSLGQMQNL-EVLNLADNRVDS-CRGVFGPNTFPSLRVLNVRNNA 1262

Query: 243  FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLP 300
             + +P  NI   RS         L       +  S      + + L ++   N     +P
Sbjct: 1263 IMALP--NIGHLRS---------LTSLDATANSISDLVDLCNASDLRVLKADNNLITEVP 1311

Query: 301  DELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE 360
            DE+  L+ +  L + G  + +L   L +L+ + +L   +C  L  +   + +L+++ SIE
Sbjct: 1312 DEIAKLEHIELLSLSGNWLDDLSPHLSELSKIRRLVFNSCM-LTEVPPEVGELRTLRSIE 1370

Query: 361  ISNCSNLKGFPEIPF-------CNIDGSGIERIPSSV-----LKLNKCSK--LESLPSSL 406
            + + + L  FP++           +DG+ ++ IP  V     LK+   S+  +E+LPS+L
Sbjct: 1371 LKD-NELADFPDVLLYLPHLANVALDGNKLDIIPDEVRRFESLKIMSLSRNNIETLPSTL 1429

Query: 407  CMFKSLTSLEIIDCKKLERLPDELGNLE 434
            C   +L  L++    KL  LP ++  LE
Sbjct: 1430 CHVNNLQWLDVRK-NKLTTLPADIVRLE 1456


>gi|297848192|ref|XP_002891977.1| hypothetical protein ARALYDRAFT_474812 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337819|gb|EFH68236.1| hypothetical protein ARALYDRAFT_474812 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 960

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 6/223 (2%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGS--KNKCMVHSLEGVPF-TELRYFEWHQFPLKTL-NI 61
           +++ ++   F +M  L LLK        K  +H  E + F   L    W  +  KTL   
Sbjct: 395 NKLTLSARAFERMHNLFLLKVYDRWLTGKRQLHIPEEMDFLPPLSLLRWDAYQRKTLPRR 454

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV L MP S++ +LWD  Q L++L +++ + S  L KLPDLS A NLE LDL  C
Sbjct: 455 FCPENLVELHMPDSQLEKLWDGTQPLLNLTKMNFRGSSCLKKLPDLSNASNLERLDLYEC 514

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            +L E  SSI  L KL  L+ + C+SL  +PT I+  +LK + + GCS L++ P + +  
Sbjct: 515 IALVELPSSISNLRKLNYLETNLCRSLQVIPTLINLAFLKEIKMMGCSRLRSFPDIPTNI 574

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
           +   L ++   + E P+S++  S +    I     L+  S+ +
Sbjct: 575 I--NLSVMETTVAEFPASLRHFSLLKSFDISGSVNLKTFSTHL 615



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 168/410 (40%), Gaps = 80/410 (19%)

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            +P+E+  L  L+ L  D    + LP       L+ +L + + S+LE +      L ++ 
Sbjct: 427 HIPEEMDFLPPLSLLRWDAYQRKTLPRRFCPENLV-ELHMPD-SQLEKLWDGTQPLLNLT 484

Query: 358 SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
            +     S LK  P++     + S +ER     L L +C  L  LPSS+   + L  LE 
Sbjct: 485 KMNFRGSSCLKKLPDLS----NASNLER-----LDLYECIALVELPSSISNLRKLNYLET 535

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
             C+ L+ +P  L NL  L+E+++ G                      CS   S P    
Sbjct: 536 NLCRSLQVIP-TLINLAFLKEIKMMG----------------------CSRLRSFPD--- 569

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD 536
           +  ++ +L +++       P  + +   LK   I G+  ++     L  +   E L L +
Sbjct: 570 IPTNIINLSVMET-TVAEFPASLRHFSLLKSFDISGSVNLKTFSTHLPTVVVTE-LHLDN 627

Query: 537 NNLQIIPESLNQLSSLVSLKLSN----NNLERIPERLDPLSSLKYLDL-FENNLDRIPEY 591
           + ++ I + +  L +L  L LSN     +L ++P      SSLK+L   +  +L+R+ E 
Sbjct: 628 SGIESITDCIRGLHNLRVLALSNCKKLKSLPKLP------SSLKWLRANYCESLERVSE- 680

Query: 592 LRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGN 651
               P + P+        +D  NC KL              ++++  + ++      PG 
Sbjct: 681 ----PLNTPNA------DLDFSNCFKLGRQ----------ARRAIFQQWFVDGRALLPGR 720

Query: 652 EIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESV 701
           ++P  F H++ G+  SL  P    Y        CVV++       +  ++
Sbjct: 721 KVPALFDHRARGN--SLTIPNSASYK------VCVVISTEFDHQAKDSTI 762



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 96/242 (39%), Gaps = 54/242 (22%)

Query: 238 CP-NLQFLEMPSCNIDGTRSKEQPSSELK---------LKKCPRPESLPSGQCMFKSLTS 287
           CP NL  L MP   ++      QP   L          LKK P   +         +L  
Sbjct: 456 CPENLVELHMPDSQLEKLWDGTQPLLNLTKMNFRGSSCLKKLPDLSNA-------SNLER 508

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY-- 345
           L++ +C     LP  + NL+ LN L  +     ++   L  LA L ++++  CS L    
Sbjct: 509 LDLYECIALVELPSSISNLRKLNYLETNLCRSLQVIPTLINLAFLKEIKMMGCSRLRSFP 568

Query: 346 -ISSSIFKLKSVE-----------------SIEISNCSNLKGF----PEIPFC--NIDGS 381
            I ++I  L  +E                 S +IS   NLK F    P +     ++D S
Sbjct: 569 DIPTNIINLSVMETTVAEFPASLRHFSLLKSFDISGSVNLKTFSTHLPTVVVTELHLDNS 628

Query: 382 GIERIPS--------SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
           GIE I           VL L+ C KL+SLP    +  SL  L    C+ LER+ + L   
Sbjct: 629 GIESITDCIRGLHNLRVLALSNCKKLKSLPK---LPSSLKWLRANYCESLERVSEPLNTP 685

Query: 434 EA 435
            A
Sbjct: 686 NA 687


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 158/318 (49%), Gaps = 30/318 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           +P+ + NL  L  LI+    I E PE + +L  L++L+L + +++  I  +I  L ++  
Sbjct: 118 IPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSD-NQITEIPEAIANLTNLTH 176

Query: 359 I------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE------ 400
           +             I+N +NL         ++  + I  IP ++  L   ++L+      
Sbjct: 177 LILFSNQITEIPEAIANLTNLTQL------DLGDNQITEIPKAIANLTNLTQLDLGDNQI 230

Query: 401 -SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-L 458
             +P ++    +LT L I+   ++  +P+ + NL  L +L +    I E+PK++A L  L
Sbjct: 231 TEIPKAIANLTNLTHL-ILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNL 289

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
           ++L L   +    +P  +    +LT L++ D K    +P+ I NL  L  L      I +
Sbjct: 290 TQLVLSD-NKITEIPEAIANLTNLTQLDLSDNK-ITEIPETIANLTNLTELYFNYNKITQ 347

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           + E++ +L++L  L LS N +  IPE++  L++L  L L+ N + +I E +  L++L  L
Sbjct: 348 IAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTEL 407

Query: 579 DLFENNLDRIPEYLRSFP 596
            L  N + +IPE L S P
Sbjct: 408 HLDGNQITQIPEALESLP 425



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 34/323 (10%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           N + LP EL  L  L +L I G  +  +P+ + Q+  L +L L        I   I ++ 
Sbjct: 68  NLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELIL--------IRVEITEIP 119

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLC 407
                 I+N +NL     I F N     I   P ++ KL   ++L+        +P ++ 
Sbjct: 120 EA----IANLTNLTHL--ILFSN----QITETPEAIAKLTNLTQLDLSDNQITEIPEAIA 169

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKC 466
              +LT L I+   ++  +P+ + NL  L +L +    I E+PK++A L  L++L L   
Sbjct: 170 NLTNLTHL-ILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGD- 227

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
           +    +P  +    +LT L I+       +P+ I NL  L  L +    I E+P+++  L
Sbjct: 228 NQITEIPKAIANLTNLTHL-ILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANL 286

Query: 527 SSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLD 586
           ++L  LVLSDN +  IPE++  L++L  L LS+N +  IPE +  L++L  L    N + 
Sbjct: 287 TNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKIT 346

Query: 587 RIPEYLRSFPTSIPSEFTSLRLS 609
           +I E +        +  T L LS
Sbjct: 347 QIAEAIAKL-----TNLTELHLS 364



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 30/331 (9%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ++LP       +L  L+I   P  ER+PD +  +  L  LI+    I E+PE +  L  L
Sbjct: 70  KTLPLELLGLPNLRKLDISGNP-LERIPDLVTQILHLEELILIRVEITEIPEAIANLTNL 128

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
           + L L   +++     +I KL ++  +++S+                 + I  IP ++  
Sbjct: 129 THLILF-SNQITETPEAIAKLTNLTQLDLSD-----------------NQITEIPEAIAN 170

Query: 393 LNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L   + L         +P ++    +LT L++ D  ++  +P  + NL  L +L +    
Sbjct: 171 LTNLTHLILFSNQITEIPEAIANLTNLTQLDLGD-NQITEIPKAIANLTNLTQLDLGDNQ 229

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           I E+PK++A L  L+ L L   +    +P  +    +L  L++        +P  I NL 
Sbjct: 230 ITEIPKAIANLTNLTHLILF-SNQITEIPEAIANLTNLMQLDL-SYNQITEIPKAIANLT 287

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L  L +    I E+PE++  L++L  L LSDN +  IPE++  L++L  L  + N + +
Sbjct: 288 NLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQ 347

Query: 565 IPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           I E +  L++L  L L  N + +IPE + + 
Sbjct: 348 IAEAIAKLTNLTELHLSSNQITQIPEAIANL 378



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 36/316 (11%)

Query: 312 LIIDGTAIRELPEGLGQLALLSKLEL-KNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
           L + G  + ELP  +G+L  L  L L K     E++     K  S  +++      L G 
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTLPLE-LLGL 79

Query: 371 PEIPFCNIDGSGIERIP---SSVLKLNK---------------------------CSKLE 400
           P +   +I G+ +ERIP   + +L L +                            +++ 
Sbjct: 80  PNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQIT 139

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LS 459
             P ++    +LT L++ D  ++  +P+ + NL  L  L +    I E+P+++A L  L+
Sbjct: 140 ETPEAIAKLTNLTQLDLSD-NQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLT 198

Query: 460 KLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
           +L L   +    +P  +    +LT L++ D +    +P  I NL  L  L +    I E+
Sbjct: 199 QLDLGD-NQITEIPKAIANLTNLTQLDLGDNQ-ITEIPKAIANLTNLTHLILFSNQITEI 256

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           PE++  L++L  L LS N +  IP+++  L++L  L LS+N +  IPE +  L++L  LD
Sbjct: 257 PEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLD 316

Query: 580 LFENNLDRIPEYLRSF 595
           L +N +  IPE + + 
Sbjct: 317 LSDNKITEIPETIANL 332



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 24/221 (10%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSK 480
           ++L  LP E+G L+ LE L + G  +         +    LK    ++ ++LP  L    
Sbjct: 26  QELTELPGEIGKLQQLESL-ILGKQV----GGYEWVGDRYLKKVSGNNLKTLPLELLGLP 80

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
           +L  L+I       R+PD +  + +L+ L +    I E+PE++  L++L  L+L  N + 
Sbjct: 81  NLRKLDI-SGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQIT 139

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP 600
             PE++ +L++L  L LS+N +  IPE +  L++L +L LF N +  IPE + +      
Sbjct: 140 ETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANL----- 194

Query: 601 SEFTSLRLS-----------VDLRNCLKLD--PNELSEIIK 628
           +  T L L             +L N  +LD   N+++EI K
Sbjct: 195 TNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPK 235



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 43/322 (13%)

Query: 66  NLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSL 124
           NL  L +  +++T++ + + NL +L  + L +S  +T++P+ ++   NL  LDLG  + +
Sbjct: 150 NLTQLDLSDNQITEIPEAIANLTNLTHLIL-FSNQITEIPEAIANLTNLTQLDLG-DNQI 207

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVL---------RGCSNLKNL 174
           TE   +I  L  L  LDL   + +T +P +I +   L  L+L            +NL NL
Sbjct: 208 TEIPKAIANLTNLTQLDLGDNQ-ITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNL 266

Query: 175 PKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI- 233
            ++   + +         I E+P +I  L+N+ +L++ S  ++  I  +I  L  L  + 
Sbjct: 267 MQLDLSYNQ---------ITEIPKAIANLTNLTQLVL-SDNKITEIPEAIANLTNLTQLD 316

Query: 234 ----RIHRCPN----------LQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQ 279
               +I   P           L F       I    +K    +EL L    +   +P   
Sbjct: 317 LSDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSN-QITQIPEAI 375

Query: 280 CMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
               +LT L  ++     ++ + +  L  L  L +DG  I ++PE L  L  L KL+L+ 
Sbjct: 376 ANLTNLTEL-YLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRG 434

Query: 340 --CSELEYISSSIFKLKSVESI 359
                   I  S++++ SVE I
Sbjct: 435 NPLPISPEILGSVYEVGSVEEI 456


>gi|15240885|ref|NP_198650.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758866|dbj|BAB09448.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006916|gb|AED94299.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1059

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 157/324 (48%), Gaps = 40/324 (12%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSKNKCMV--HSLEGVPFTELRYFEWHQFPLKT 58
           +  ++  + I+   F  MT L+ L+    +++ +     L  +P  +LR  EW  FP+K+
Sbjct: 590 LDNLSGRLNISERAFEGMTNLKFLRVLRDRSEKLYLPQGLNYLP-KKLRLIEWDYFPMKS 648

Query: 59  L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
           L +      LV+L M  SK+ +LW+  Q L +LK ++L  S+ L +LPDLS A  L+ L+
Sbjct: 649 LPSNFCTTYLVNLHMRKSKLEKLWEGKQPLGNLKWMNLSNSRNLKELPDLSTATKLQDLN 708

Query: 118 LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP- 175
           L  CSSL E   SI     LE L+L  C SL  LP+SI S + L+ L LRGCS L+ LP 
Sbjct: 709 LTRCSSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKLRELRLRGCSKLEVLPT 768

Query: 176 ----------KMTSCHLRSTLP----------LLGVGIEELPSSIKCLSNIGELLIYSCK 215
                      +T C L  + P          L    I E+PS IK  S +   ++   +
Sbjct: 769 NISLESLDNLDITDCSLLKSFPDISTNIKHLSLARTAINEVPSRIKSWSRLRYFVVSYNE 828

Query: 216 RLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESL 275
            L+    +      L++I +    + +  E+P      +R +      L L+ C    +L
Sbjct: 829 NLKESPHA------LDTITMLSSNDTKMQELPRWVKKISRLE-----TLMLEGCKNLVTL 877

Query: 276 PSGQCMFKSLTSLEIIDCPNFERL 299
           P    +  SL+++ +I+C + ERL
Sbjct: 878 PE---LPDSLSNIGVINCESLERL 898



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 215/510 (42%), Gaps = 111/510 (21%)

Query: 299  LPDELGNLQALNRLI-IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
            LP  L  L    RLI  D   ++ LP       L++ L ++  S+LE +      L +++
Sbjct: 625  LPQGLNYLPKKLRLIEWDYFPMKSLPSNFCTTYLVN-LHMRK-SKLEKLWEGKQPLGNLK 682

Query: 358  SIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEI 417
             + +SN  NLK  P++       S   ++    L L +CS L  +P S+    +L  L +
Sbjct: 683  WMNLSNSRNLKELPDL-------STATKLQD--LNLTRCSSLVEIPFSIGNTTNLEKLNL 733

Query: 418  IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
            + C  L  LP  +G+L  L ELR+ G                      CS  E LP+ + 
Sbjct: 734  VMCTSLVELPSSIGSLHKLRELRLRG----------------------CSKLEVLPTNIS 771

Query: 478  VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
            + +SL +L+I DC      PD   N+++   L++  TAI EVP  +   S L + V+S N
Sbjct: 772  L-ESLDNLDITDCSLLKSFPDISTNIKH---LSLARTAINEVPSRIKSWSRLRYFVVSYN 827

Query: 538  -NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSF 595
             NL+  P +L+ ++ L S   ++  ++ +P  +  +S L+ L L    NL  +PE     
Sbjct: 828  ENLKESPHALDTITMLSS---NDTKMQELPRWVKKISRLETLMLEGCKNLVTLPE----L 880

Query: 596  PTSIP---------------SEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGET 640
            P S+                S +    + +   NCLKL+  E  E+I           +T
Sbjct: 881  PDSLSNIGVINCESLERLDCSFYKHPNMFIGFVNCLKLN-KEARELI-----------QT 928

Query: 641  YITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHES 700
              +     PG  +P  F ++ TG ++ +   Q      L+ F  CV++            
Sbjct: 929  SSSTCSILPGRRVPSNFTYRKTGGSVLVNLNQSPLSTTLV-FKACVLLVN---------- 977

Query: 701  VEDDRK-------CNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFLGSSIFAGE--- 750
             +DD+K         ++  + D+R           LG I    S H F+   I A     
Sbjct: 978  -KDDKKKEANGTSFQVYYRIMDKRK----------LGVIVPWRSAHGFVVPPILAEHLLT 1026

Query: 751  ---NSCKRSDEFF--FHIDRSCCEVKKCGI 775
                +  +++EFF  F ++R    +K+CG+
Sbjct: 1027 FELEADVKTNEFFFEFEVNRYEVVIKECGV 1056



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 43/235 (18%)

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L L +C     +P       +L  L ++ C +   LP  +G+L  L             
Sbjct: 706 DLNLTRCSSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHKLR------------ 753

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
                      +L L+ CS+LE + ++I  L+S+++++I++CS LK FP+I   NI    
Sbjct: 754 -----------ELRLRGCSKLEVLPTNI-SLESLDNLDITDCSLLKSFPDIS-TNIKHLS 800

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
           + R           + +  +PS +   KS + L        E L +    L+ +  L   
Sbjct: 801 LAR-----------TAINEVPSRI---KSWSRLRYFVVSYNENLKESPHALDTITMLSSN 846

Query: 443 GTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            T ++E+P+ + +++ L  L L+ C +  +LP    +  SL+++ +I+C++  RL
Sbjct: 847 DTKMQELPRWVKKISRLETLMLEGCKNLVTLPE---LPDSLSNIGVINCESLERL 898


>gi|22325729|ref|NP_179298.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251488|gb|AEC06582.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1195

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 167/367 (45%), Gaps = 44/367 (11%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVP------FTELRYFEWH 52
           +S++++ + ++   FS+M  LR LK   S+    C V      P         +RY  W 
Sbjct: 585 VSEMDNNMTLDSKFFSEMCNLRYLKVYNSQCSRDCDVGCKLTFPDGLKCSMENVRYLYWL 644

Query: 53  QFPLKTLN-ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           QFPLK L+   + +NL+ L +P SK+T+LW + + +  LK +DL +S  L  +  L  A 
Sbjct: 645 QFPLKKLSKAFNPKNLIELNLPYSKITRLWKESKEISKLKWVDLSHSSELCDISGLIGAH 704

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           N+  L+L  C  L      +Q +  L  L+L  C  L SLP     K LK L+L  C N 
Sbjct: 705 NIRRLNLEGCIELKTLPQEMQEMESLIYLNLGGCTRLVSLP-EFKLKSLKTLILSHCKNF 763

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +  P ++ C     L L G  I+ +P+SI+ L  +  L +  C+ L ++   +  L+ L+
Sbjct: 764 EQFPVISEC--LEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQ 821

Query: 232 SIRIHRCPNLQFL-----EMPSCNI---DGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
            + +  C  L+F       M S  I   DGT  K+ P     L +C + +          
Sbjct: 822 ELILSGCSKLKFFPELKETMKSIKILLLDGTAIKQMPI----LLQCIQSQGHSVAN---- 873

Query: 284 SLTSLEIIDCPNFERLPDELGNL---QALNRLIIDGTAIRELPEGLGQLALLSKLELKNC 340
                        + LP+ L +     +L  L + G  I  L   + QL  L  L+LKNC
Sbjct: 874 -------------KTLPNSLSDYYLPSSLLSLCLSGNDIESLHANISQLYHLKWLDLKNC 920

Query: 341 SELEYIS 347
            +L+ +S
Sbjct: 921 KKLKSVS 927



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 175/385 (45%), Gaps = 52/385 (13%)

Query: 347  SSSIFKLKSVE---SIEISNCSNLKGFPEIPFCNIDGS-GIERIPSSV--------LKLN 394
            S  I KLK V+   S E+ + S L G   I   N++G   ++ +P  +        L L 
Sbjct: 677  SKEISKLKWVDLSHSSELCDISGLIGAHNIRRLNLEGCIELKTLPQEMQEMESLIYLNLG 736

Query: 395  KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             C++L SLP      KSL +L +  CK  E+ P      E LE L ++GT I+ +P S+ 
Sbjct: 737  GCTRLVSLPE--FKLKSLKTLILSHCKNFEQFP---VISECLEALYLQGTAIKCIPTSIE 791

Query: 455  QLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
             L  L  L LK C    SLP  L   +SL  L +  C      P+    ++ +K+L + G
Sbjct: 792  NLQKLILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSKLKFFPELKETMKSIKILLLDG 851

Query: 514  TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQL---SSLVSLKLSNNNLERIPERLD 570
            TAI+++P  L  + S    V +    + +P SL+     SSL+SL LS N++E +   + 
Sbjct: 852  TAIKQMPILLQCIQSQGHSVAN----KTLPNSLSDYYLPSSLLSLCLSGNDIESLHANIS 907

Query: 571  PLSSLKYLDLFE----NNLDRIPEYLRSF-------------PTSIPSEFTSLRLSVDLR 613
             L  LK+LDL       ++  +P  L+               P ++      +  +    
Sbjct: 908  QLYHLKWLDLKNCKKLKSVSVLPPNLKCLDAHGCDSLEEVGSPLAVLMVTGKIHCTYIFT 967

Query: 614  NCLKLDPNELSEIIKDGWMKQSVNGET-------YITKSMY---FPGNEIPKWFRHQSTG 663
            NC KLD    S II   W K  +  +        ++ +S+    FPG E+P  F HQ+ G
Sbjct: 968  NCNKLDQVAESNIISFTWRKSQMMSDALNRYNGGFVLESLVSTCFPGCEVPASFDHQAYG 1027

Query: 664  STISLKTPQPTGYNKLMGFAFCVVV 688
            + +  K P+    ++L G A C V+
Sbjct: 1028 ALLQTKLPRHWCDSRLTGIALCAVI 1052



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 12/131 (9%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L  C R  SLP  +   KSL +L +  C NFE+ P     L+AL    + GTAI+ +P
Sbjct: 733 LNLGGCTRLVSLP--EFKLKSLKTLILSHCKNFEQFPVISECLEAL---YLQGTAIKCIP 787

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFC 376
             +  L  L  L+LK+C  L  +   +  L+S++ + +S CS LK FPE       I   
Sbjct: 788 TSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSKLKFFPELKETMKSIKIL 847

Query: 377 NIDGSGIERIP 387
            +DG+ I+++P
Sbjct: 848 LLDGTAIKQMP 858


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 40/344 (11%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWE 65
           +E+     +FSK+ +L+LL   G+K   +      +P T L+ F W + P+KTL +   +
Sbjct: 360 TEVNQRDLSFSKLCQLKLLILDGAKAPILC----DIPCT-LKVFCWRRCPMKTLPLTDHQ 414

Query: 66  N--LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSS 123
              LV + +  S++ +LWD  + L +L+ + L + K L + PDLS A NL+ L+L  C  
Sbjct: 415 RYELVEINLSKSQIAELWDGKKVLENLEHLYLSWCKQLKQTPDLSGAPNLKKLNLRGCEE 474

Query: 124 LTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR 183
           L   H S+ +  +L  L+L+ CK L +L   +    L++L L  CS+L+ LP+   C  +
Sbjct: 475 LDYIHPSLAHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSSLRRLPEFGECMKK 534

Query: 184 -STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ 242
            S L L   GIEELP ++  L+ + EL +  C ++  +  S+     L+ + +   P   
Sbjct: 535 LSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLVLRALPQ-- 592

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
                    DG  S    +         R ES                        L  +
Sbjct: 593 -------KTDGLESLTVRADYDDSDSSSREES-----------------------TLSYD 622

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
           + +L +L  L +       +P  + QL  L+ L+L  C ELE +
Sbjct: 623 IAHLASLTYLDLSRNRFLRVPISIHQLPRLTHLKLSFCDELEVL 666



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 137/331 (41%), Gaps = 52/331 (15%)

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLER 425
           NL+G  E+ + +   +  +R+    L L  C +LE+L   L M  SL  L++  C  L R
Sbjct: 468 NLRGCEELDYIHPSLAHHKRLVE--LNLEDCKRLETLGDKLEM-SSLEKLDLDSCSSLRR 524

Query: 426 LPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTS 484
           LP+    ++ L  L +  TGI E+P +L  LA +S+L L  C     L   L     L  
Sbjct: 525 LPEFGECMKKLSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKK 584

Query: 485 LEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPE------SLGQLSSLEWLVLSDNN 538
           L +        LP +   LE L V      +     E       +  L+SL +L LS N 
Sbjct: 585 LVL------RALPQKTDGLESLTVRADYDDSDSSSREESTLSYDIAHLASLTYLDLSRNR 638

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
              +P S++QL  L  LKLS                      F + L+ +PE        
Sbjct: 639 FLRVPISIHQLPRLTHLKLS----------------------FCDELEVLPE-------- 668

Query: 599 IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDG--WMKQSVNGETYITKSMYFPGNEIPKW 656
           +PS   SLR  +D + C  LD + + ++I        +S + +      M   G EIP W
Sbjct: 669 LPS---SLR-ELDAQGCYSLDKSYVDDVISKTCCGFAESASQDREDFLQMMITGEEIPAW 724

Query: 657 FRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
           F HQ     +S+  P      +++  A C +
Sbjct: 725 FEHQEEDEGVSVSFPLNCPSTEMVALALCFL 755


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS-----KNKCMVHSLEGVPF--TELRYFEWHQ 53
           +S +  +++     F++M +L+LLK   S     K  C VH  +G  F   ELRY   H 
Sbjct: 532 LSHVKEKLRFETPAFARMNKLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHG 591

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           + LK+L N  + ENLV L MP S V QLW   + +  LK IDL +S  LT+ P+ S   N
Sbjct: 592 YNLKSLPNDFNAENLVHLSMPHSYVQQLWKGSKGMEKLKSIDLSHSTRLTETPNFSGVVN 651

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           LE L L  C SL + H+SI  LNKL++L+L  CK L SL  SI     L+ LV+ GC  L
Sbjct: 652 LEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKL 711

Query: 172 KNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           K  P+ +    +   L      + E+PSS+  L N+
Sbjct: 712 KKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNL 747



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 174/403 (43%), Gaps = 63/403 (15%)

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C  L+SL  S+C   SL +L +  C KL++ P+ LG LE L+EL  + T + EVP S+  
Sbjct: 684  CKMLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGF 743

Query: 456  LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
            L  L     +        PS +  ++S       D   F+ LP    ++  L  L     
Sbjct: 744  LKNLETFSFQGRKGPSPAPSSMLRTRS-------DSMGFI-LP----HVSGLSSLLKLNL 791

Query: 515  AIREVPESL-----GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
            + R + +       G LSSL+ L+L+ NN   +P  ++QL  L  L+  N   L+ +PE 
Sbjct: 792  SDRNILDGARLSDLGLLSSLKILILNGNNFDTLPGCISQLFLLGWLESKNCQRLQALPEL 851

Query: 569  LDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
              P SS+ Y+      +L+ +         S  S F+SL ++      LK  P   S++ 
Sbjct: 852  --P-SSIGYIGAHNCTSLEAV---------SNQSLFSSLMIAK-----LKEHPRRTSQLE 894

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
             D        G+     ++  PG+ IP W  +QS+G  +++K P        + FA CVV
Sbjct: 895  HDS------EGQLSAAFTVVAPGSGIPDWISYQSSGREVTVKLPPNWFTTYFLAFASCVV 948

Query: 688  V-------ACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
                    A S++E C         KC +F       S  YD +  S+      +ESDHV
Sbjct: 949  TSPSVLPYADSINELC--------TKCTVFYSTSSCVSSSYDVFPRSHAE--GRMESDHV 998

Query: 741  FLGSSIFAGENSCKRSDEFFFHIDR---SCCEVKKCGIHFVHA 780
            +L    F    +C       F  +    +   +K+CG+  V+ 
Sbjct: 999  WLRYVRFPISINCHEVTHIKFSFEMILGTSSAIKRCGVGLVYG 1041



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 34/73 (46%)

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
           + C   +SL    C   SL +L +  C   ++ P+ LG L+ L  L  D TA+ E+P  +
Sbjct: 682 RDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSM 741

Query: 327 GQLALLSKLELKN 339
           G L  L     + 
Sbjct: 742 GFLKNLETFSFQG 754


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 240/527 (45%), Gaps = 44/527 (8%)

Query: 85  QNLVSLKRIDLKY---SKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLD 141
           Q + SL+++   Y   +KL    P +   Q L +L + Y + LTE  S +  L  LEVL 
Sbjct: 91  QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSI-YDNQLTEVPSGVCSLPNLEVLS 149

Query: 142 LDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEEL---P 197
           +   K L++ P  +   + L++L ++  + L  +P    C L   L +L V   +L   P
Sbjct: 150 VSNNK-LSTFPPGVEKLQKLRKLFIKD-NQLTEVPSGV-CSL-PNLEVLNVSNNKLSTFP 205

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
             ++ L  + EL IY   +L  + S +  L  LE + ++      F   P       +  
Sbjct: 206 PGVEKLQKLKELGIYD-NQLTEVPSGVCSLPNLEVLNVYNNKLSTF--PPGVKCHNNKLS 262

Query: 258 EQPSSELKLKKCP-------RPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQA 308
             P    KL+K         +   +PSG C   SL +LE +   N      P  +  LQ 
Sbjct: 263 TFPPGVEKLQKLKELGIYDNQLTEVPSGVC---SLPNLEKLSAYNNKLSTFPPGVEKLQK 319

Query: 309 LNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLK 368
           L  L I    + E+P G+  L  L  L + N ++L      + KL+ +  + I +     
Sbjct: 320 LRELYIYDNQLTEVPSGVCSLPNLEMLGVYN-NKLSTFPPGVEKLQKLRELYIYD----N 374

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCS-KLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
              E+P      SG+  +P+  + L+ C+ KL + P  +   + L  L I D  +L  +P
Sbjct: 375 QLTEVP------SGVCSLPNLEM-LSVCNNKLSTFPPGVEKLQKLRKLYIND-NQLTEVP 426

Query: 428 DELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLE 486
             + +L  LE L V    IR +P  + +LA L  L +  C  F+  P ++   K+L  L 
Sbjct: 427 SCVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQ-FDEFPRQVLQLKTLEELY 485

Query: 487 IIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
              CK F  +PDE+GNL++L  L++    +R +P ++  L +L  + L+ N     PE L
Sbjct: 486 AGGCK-FDIVPDEVGNLQHLWHLSLDINLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVL 544

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
            +L ++  L + NNN+ R+P  L     LK L++  N +   P+ +R
Sbjct: 545 CELPAMEKLNIRNNNITRLPTALHRADKLKDLNVSGNPMSYPPQEVR 591



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 36/343 (10%)

Query: 285 LTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           +T LE +D        +P+ +G LQ L+RL      +  LP+ +G L  L+ L +   ++
Sbjct: 50  ITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLPQAIGSLQKLTHLYVYR-NK 108

Query: 343 LEYISSSIFKLKSVESIEISN------CSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC 396
           L  +   I KL+ +  + I +       S +   P +   ++  + +   P  V KL K 
Sbjct: 109 LANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKL 168

Query: 397 SK-------LESLPSSLCMFKSLTSLEIIDC--KKLERLPDELGNLEALEELRVEGTGIR 447
            K       L  +PS +C   SL +LE+++    KL   P  +  L+ L+EL +    + 
Sbjct: 169 RKLFIKDNQLTEVPSGVC---SLPNLEVLNVSNNKLSTFPPGVEKLQKLKELGIYDNQLT 225

Query: 448 EVPK---SLAQLALSKLKLKKCSSF-----------ESLPSRLYVSKSLTSLEIIDCKNF 493
           EVP    SL  L +  +   K S+F            + P  +   + L  L I D    
Sbjct: 226 EVPSGVCSLPNLEVLNVYNNKLSTFPPGVKCHNNKLSTFPPGVEKLQKLKELGIYD-NQL 284

Query: 494 MRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLV 553
             +P  + +L  L+ L+     +   P  + +L  L  L + DN L  +P  +  L +L 
Sbjct: 285 TEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLE 344

Query: 554 SLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
            L + NN L   P  ++ L  L+ L +++N L  +P  + S P
Sbjct: 345 MLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLP 387



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 32/203 (15%)

Query: 421 KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES----LPSRL 476
           + L  +P+E+ ++  LE L V    +  +P+++ +L     KL +  ++ +    LP  +
Sbjct: 38  QGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQ----KLSRLDAYSNMLTCLPQAI 93

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              + LT L +   K    LP  I  L+ L +L+I    + EVP  +  L +LE L +S+
Sbjct: 94  GSLQKLTHLYVYRNK-LANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSN 152

Query: 537 NNLQIIPESL-------------NQLSSLVS----------LKLSNNNLERIPERLDPLS 573
           N L   P  +             NQL+ + S          L +SNN L   P  ++ L 
Sbjct: 153 NKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEKLQ 212

Query: 574 SLKYLDLFENNLDRIPEYLRSFP 596
            LK L +++N L  +P  + S P
Sbjct: 213 KLKELGIYDNQLTEVPSGVCSLP 235



 Score = 42.4 bits (98), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query: 509 LTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPER 568
           L +    +  +PE +  ++ LE+L +S N L  IPE++ +L  L  L   +N L  +P+ 
Sbjct: 33  LDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLPQA 92

Query: 569 LDPLSSLKYLDLFENNLDRIP 589
           +  L  L +L ++ N L  +P
Sbjct: 93  IGSLQKLTHLYVYRNKLANLP 113


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 180/377 (47%), Gaps = 26/377 (6%)

Query: 238 CPNLQ--FLEM-PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
           CP LQ  + E  P+ + +G   +     EL+L+      ++P+      +L  L +    
Sbjct: 2   CPELQERWPEASPAEHWEGVTLENGRVVELELEDVGLTGAVPAELGRLSALRKLNL-GRN 60

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
               +P E+G L +L  L +D   +  +P  +GQL  L  L L++ ++L  + + I +L 
Sbjct: 61  QLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLES-NQLTSVPAEIGQLA 119

Query: 355 SVESIEISNCSNLKGFP-EI-PFCNIDGSGIER-----IPSSVLKLNKC-------SKLE 400
           S+E   +S  + L   P EI     ++G  + R     +P+ + ++          ++L 
Sbjct: 120 SLEVFYLSR-NQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLT 178

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSK 460
           SLP+ +    SL  L +    +L  +P ++G L  LE L ++   +  VP  + QLA  K
Sbjct: 179 SLPAEIGQLTSLKELGL-GGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLK 237

Query: 461 LKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIRE 518
               + +   S+P+ +     LT LE ++ ++     +P EIG L  LK L +    +  
Sbjct: 238 FLHLQGNQLASVPAEI---GQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTS 294

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL 578
           VP  +GQLSSL+ L L  N L  +P  + QL+SL  L LS N L  +P  +  L+SL++L
Sbjct: 295 VPAEIGQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWL 354

Query: 579 DLFENNLDRIPEYLRSF 595
            L  N L  +P  +R  
Sbjct: 355 WLNNNELTSVPAAIREL 371


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 171/354 (48%), Gaps = 70/354 (19%)

Query: 294 PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKL 353
           P    LPDEL  L+ LN L +      E+P  + ++  LSKL L+  ++L +IS  I  L
Sbjct: 6   PQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLR-YNKLTWISHDIGNL 64

Query: 354 KSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL-NKCSKLESLPSSLCMFKSL 412
             +  + I N        E+P    + +G++     +L L N C  L +LPSS+     L
Sbjct: 65  TGLNILSIRN----NKITELPASLGNLAGLQ-----ILDLMNNC--LTALPSSIGKLSRL 113

Query: 413 TSLEIIDCKKLERLPDELGNLEAL-----------------------EELRVEGTGIREV 449
           +SL + +  KLERLP+E+GNL  L                       EEL VEG  +  +
Sbjct: 114 SSLNV-EYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVL 172

Query: 450 PKS-LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--------------- 492
           P   L+QL  ++ L+L + ++F ++P+ L    +LT LEI +  N               
Sbjct: 173 PTGILSQLVNVNNLQLSR-NNFTTIPADL---GALTKLEIFNMDNNSVREIPAGIFSSLK 228

Query: 493 -----------FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
                         +P++IG+L  L+ + +    +  +PE+LGQL +LE LVL +NNL  
Sbjct: 229 LLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSA 288

Query: 542 IPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           +PES ++L  L  L L  N L R+PE +  L++L+ L    N L  +P+ L + 
Sbjct: 289 LPESASRLVKLRVLDLEGNRLTRLPE-IGSLAALEELHAQSNRLTALPQSLGNL 341



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 159/329 (48%), Gaps = 29/329 (8%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +LPS       L+SL + +    ERLP+E+GNL  L    +   ++ ELP  +    LL 
Sbjct: 102 ALPSSIGKLSRLSSLNV-EYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLE 160

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNC------SNLKGFPEIPFCNIDGSGIERIP 387
           +L ++    +   +  + +L +V ++++S        ++L    ++   N+D + +  IP
Sbjct: 161 ELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIP 220

Query: 388 SSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIR 447
           + +      S L+ L      + S+TS+           P+++G+L +L E+ +    + 
Sbjct: 221 AGIF-----SSLKLLGKINLNYNSITSI-----------PNDIGDLVSLREINLGSNKLE 264

Query: 448 EVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEY 505
            +P++L QL   +  +   ++  +LP     +  L  L ++D +     RLP EIG+L  
Sbjct: 265 LLPETLGQLVNLESLVLGNNNLSALPES---ASRLVKLRVLDLEGNRLTRLP-EIGSLAA 320

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           L+ L  +   +  +P+SLG L +L    + +N L  +P S+ QL SL S  +++N L  +
Sbjct: 321 LEELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELPLSIGQLKSLTSFHVNDNRLSDV 380

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRS 594
           P  L     L+ L+L +N L  IP  + S
Sbjct: 381 PCELANCLKLQLLNLDDNPLTAIPPNVTS 409



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 206/489 (42%), Gaps = 108/489 (22%)

Query: 38  LEGVPFTELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKY 97
           L+ +   +LR+ ++ + P     I   + L  L +  +K+T +  D+ NL  L  + ++ 
Sbjct: 18  LKNLNVLDLRHNKFTEVPPV---IYRMKQLSKLYLRYNKLTWISHDIGNLTGLNILSIRN 74

Query: 98  SKLLTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIH 156
           +K +T+LP  L     L+ILDL   + LT   SSI  L++L  L+++  K L  LP  I 
Sbjct: 75  NK-ITELPASLGNLAGLQILDL-MNNCLTALPSSIGKLSRLSSLNVEYNK-LERLPEEI- 130

Query: 157 SKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKR 216
                           NL K+    LR         + ELP +IK           +C  
Sbjct: 131 ---------------GNLVKLKHFGLRYN------SLVELPLAIK-----------NCVL 158

Query: 217 LENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLP 276
           LE ++    KL  L +  + +  N+  L++   N                       ++P
Sbjct: 159 LEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNF---------------------TTIP 197

Query: 277 SGQCMFKSLTSLEIIDCPN--FERLPDEL-GNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +      +LT LEI +  N     +P  +  +L+ L ++ ++  +I  +P  +G L  L 
Sbjct: 198 AD---LGALTKLEIFNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLR 254

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
           ++ L   ++LE +  ++ +L ++ES+ + N +NL   PE        S    +   VL L
Sbjct: 255 EINL-GSNKLELLPETLGQLVNLESLVLGN-NNLSALPE--------SASRLVKLRVLDL 304

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEELRVEGTGIREVPK 451
            + ++L  LP       SL +LE +  +  +L  LP  LGNL AL    V    + E+P 
Sbjct: 305 -EGNRLTRLPE----IGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELPL 359

Query: 452 SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           S+ QL                       KSLTS  + D +    +P E+ N   L++L +
Sbjct: 360 SIGQL-----------------------KSLTSFHVNDNR-LSDVPCELANCLKLQLLNL 395

Query: 512 KGTAIREVP 520
               +  +P
Sbjct: 396 DDNPLTAIP 404


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 253/576 (43%), Gaps = 74/576 (12%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 48  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 105

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC--SNLKNLPK-MTSCHLRST 185
           + I  L KLE LDL   + L  LP  I    L+ L   G   + L   PK +        
Sbjct: 106 AVIVELQKLESLDLSENR-LIILPNEIGR--LQNLQDLGLYKNKLTTFPKEIGRLQNLQD 162

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------ 233
           L L    +   P  I  L N+ +L +Y  K L      I +LQ L+ +            
Sbjct: 163 LGLYKNKLTTFPKEIGRLQNLQDLGLYKNK-LTTFPKEIGQLQNLQKLWLSENRLTALPK 221

Query: 234 RIHRCPNLQFLEMPSCN---IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
            I +  NLQ L++ +     +     + Q    L L+   +  +LP      ++L  L +
Sbjct: 222 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN-QLATLPVEIGQLQNLQELYL 280

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
            +      LP E+G LQ L  L      +  LP+ +GQL  L  L L N + L  +   I
Sbjct: 281 RNN-RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVN-NRLTVLPKEI 338

Query: 351 FKLKSVESIEI-SNCSNLKGFPEI----PFCNID-----GSGIER--------------- 385
            +L++++ +E+  N  +LK    I    P  N+D       G+ R               
Sbjct: 339 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 398

Query: 386 ----------IPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
                      P  +LK     +L        +LP  +   K+L  L  +    L+++P 
Sbjct: 399 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYL-ALGLNGLKKIPS 457

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           E+G L  LE L +E   +  +PK + QL  L +L L + ++ +  P+ +   K L  L++
Sbjct: 458 EIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQ-NTLKIFPAEIEQLKKLQKLDL 516

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
                F   P EIG LE L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + 
Sbjct: 517 -SVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 575

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           +L  L +L L NN L  +P  +  L +L++L L  N
Sbjct: 576 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 611



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 167/336 (49%), Gaps = 24/336 (7%)

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           + G  +  LP+ +GQL  L +L LK  + L  +   I +L++++ +++ + + L  FP +
Sbjct: 50  LSGEKLTALPKEIGQLKNLQELNLK-WNLLTTLPKEIGQLENLQELDLRD-NQLATFPAV 107

Query: 374 PF-------CNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIID 419
                     ++  + +  +P+ + +L          +KL + P  +   ++L  L +  
Sbjct: 108 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYK 167

Query: 420 CKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYV 478
             KL   P E+G L+ L++L +    +   PK + QL  L KL L + +   +LP  +  
Sbjct: 168 -NKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE-NRLTALPKEIGQ 225

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
            K+L +L++ + + F  LP EIG L+ L+ L ++   +  +P  +GQL +L+ L L +N 
Sbjct: 226 LKNLQTLDLQNNQ-FTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNR 284

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
           L ++P+ + QL +L  L    N L  +P+ +  L +L+ L+L  N L  +P+ +      
Sbjct: 285 LTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNL 344

Query: 599 IPSEFTSLRLSVDLRNCL-KLDPN---ELSEIIKDG 630
              E     LS+  R  + KL P+   +L E+ +DG
Sbjct: 345 QDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 380


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 229/510 (44%), Gaps = 79/510 (15%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           +++T L  +++NL +LK + L  ++L T   ++   QNLE LDLG  + LT     I  L
Sbjct: 66  NQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQ-NQLTTLPEEIGKL 124

Query: 135 NKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
             L+ L+L++ + LT+LP  I + + L+ L L G +    LPK  +      L  L +GI
Sbjct: 125 QNLQKLNLNQNQ-LTTLPKEIGNLQKLQELYL-GDNQFATLPK--AIGKLQKLQELDLGI 180

Query: 194 EE---LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCN 250
            +   LP  I+ L  + EL +    +L  +   I  LQ L+++ ++     Q   +P   
Sbjct: 181 NQLTTLPKEIEKLQKLQELDL-GINQLTTLPKEIGNLQKLQTLNLNHN---QLTNLP--- 233

Query: 251 IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
                           K+  + + L +       LT+           LP E+GNLQ L 
Sbjct: 234 ----------------KEIGKLQKLQTLNLNHNQLTT-----------LPKEIGNLQNLQ 266

Query: 311 RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
           +L +    +  LP+           E++   +L+ +  S  +L SV   EI N  NL+  
Sbjct: 267 QLYLYSNQLTTLPK-----------EIEKLQKLQELHLSDNQLTSVPE-EIGNLQNLQKL 314

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
                 ++  + +  IP  +  L K  +L+                 +   +L  LP E+
Sbjct: 315 ------SLHSNQLTIIPKEIGNLQKLEELD-----------------LGQNQLTILPKEI 351

Query: 431 GNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
           GNL+ L+ L +    +  +PK + +L   +      +   +LP  +   + L  L  +  
Sbjct: 352 GNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWL-YLAH 410

Query: 491 KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLS 550
            N   +P EIG+L+ L+VLT+    +  +P+ +G L +L+ L L  N L  +P+ + +L 
Sbjct: 411 NNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLR 470

Query: 551 SLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           +L SL LS N L   PE +  L  LK+L L
Sbjct: 471 NLESLDLSENPLTSFPEEIGKLQHLKWLRL 500



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 226/510 (44%), Gaps = 61/510 (11%)

Query: 119 GYCSSLTETHSSIQYLNKLEVLDL------DRCKSLTSLPTSIHSKYLKRLVLRGCSNLK 172
           G   +LTE   ++Q+   + VL+L      +    LT+LP  I +    +++  G + L 
Sbjct: 36  GVYYNLTE---ALQHPTDVRVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLGSNQLT 92

Query: 173 NLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
            LPK +        L L    +  LP  I  L N+ +L + +  +L  +   I  LQ L+
Sbjct: 93  TLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNL-NQNQLTTLPKEIGNLQKLQ 151

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
            + +      QF  +P         K Q   EL L    +  +LP      + L  L++ 
Sbjct: 152 ELYLGDN---QFATLPKA-----IGKLQKLQELDLG-INQLTTLPKEIEKLQKLQELDL- 201

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
                  LP E+GNLQ L  L ++   +  LP+ +G+L  L  L L N ++L  +   I 
Sbjct: 202 GINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNL-NHNQLTTLPKEIG 260

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
            L++++ + +             + N     +  +P  + KL K        ++L S+P 
Sbjct: 261 NLQNLQQLYL-------------YSN----QLTTLPKEIEKLQKLQELHLSDNQLTSVPE 303

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   ++L  L +    +L  +P E+GNL+ LEEL +    +  +PK +  L  L  L L
Sbjct: 304 EIGNLQNLQKLSL-HSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDL 362

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +   +LP  +   ++  +L  ++      LP EIGNL+ LK L +    +  +P+ +
Sbjct: 363 GN-NKLTALPKEIGKLQNPQTL-YLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEI 420

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           G L SL+ L L+ N L  +P+ +  L +L  L L  N L  +P+ +  L +L+ LDL EN
Sbjct: 421 GSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSEN 480

Query: 584 NLDRIPE-----------YLRSFPTSIPSE 602
            L   PE            L + PT +P +
Sbjct: 481 PLTSFPEEIGKLQHLKWLRLENIPTLLPQK 510



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 175/344 (50%), Gaps = 31/344 (9%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+GNLQ L  L +       LP+ +G+L  L +L+L   ++L  +   I KL+ ++ 
Sbjct: 140 LPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDL-GINQLTTLPKEIEKLQKLQE 198

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           +++   + L   P+      +   ++++    L LN  ++L +LP  +   + L +L + 
Sbjct: 199 LDLG-INQLTTLPK------EIGNLQKL--QTLNLNH-NQLTNLPKEIGKLQKLQTLNL- 247

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLY 477
           +  +L  LP E+GNL+ L++L +    +  +PK + +L  L +L L   +   S+P  + 
Sbjct: 248 NHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSD-NQLTSVPEEIG 306

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
             ++L  L +        +P EIGNL+ L+ L +    +  +P+ +G L  L+ L L +N
Sbjct: 307 NLQNLQKLSL-HSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNN 365

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP- 596
            L  +P+ + +L +  +L L+ N L  +P+ +  L  LK+L L  NNL  IP+ + S   
Sbjct: 366 KLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQS 425

Query: 597 -----------TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
                      T++P E  +L+   +L+  L LD N+L+ + K+
Sbjct: 426 LQVLTLNSNRLTTLPKEIGNLQ---NLQ-GLNLDKNQLTTLPKE 465


>gi|108740000|gb|ABG01388.1| disease resistance protein [Arabidopsis thaliana]
          Length = 201

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 97/188 (51%), Gaps = 3/188 (1%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            LR   W  +P   L    H E LV L M  S++ +LW   Q L +LK++DL  S  L +
Sbjct: 5   HLRLLRWEAYPSNALPTTFHPEYLVELDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKE 64

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LPDLS A NLE L+L YC SL E  SS   L KLE L +  C  L  +PT I+   L   
Sbjct: 65  LPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFF 124

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS LK  P + S H+ S L +    +EELP+SI   + +  L+I      + ++  
Sbjct: 125 NMHGCSQLKKFPGI-STHI-SRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYL 182

Query: 224 IFKLQFLE 231
              L +L+
Sbjct: 183 PMSLTYLD 190



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 26/175 (14%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 48  LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIH 104

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC+ L+  P +    I+ + ++        ++ CS+L+  P       +  S  +ID   
Sbjct: 105 NCTKLEVVPTL----INLASLD-----FFNMHGCSQLKKFPG----ISTHISRLVIDDTL 151

Query: 423 LERLPDELGNLEALEELRVEGTG----IREVPKSLAQLALSKLKLKKCSSFESLP 473
           +E LP  +     L  L + G+G    +  +P SL  L L      +C+  E +P
Sbjct: 152 VEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDL------RCTGIEKIP 200



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 62/199 (31%)

Query: 150 SLPTSIHSKYLKRLVLR---------GCSNLKNLPKMT---SCHLRSTLPLLGVGIEELP 197
           +LPT+ H +YL  L ++         G   L NL KM    S HL+           ELP
Sbjct: 18  ALPTTFHPEYLVELDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLK-----------ELP 66

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ------------FLE 245
             +   +N+  L +  CK L  I SS  +L+ LE++ IH C  L+            F  
Sbjct: 67  D-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFN 125

Query: 246 MPSCN----------------IDGTRSKEQPSSELKLKKCPRPESLP-SGQCMFKSLTSL 288
           M  C+                ID T  +E P+S   +  C R  +L  SG   FK+LT L
Sbjct: 126 MHGCSQLKKFPGISTHISRLVIDDTLVEELPTS---IILCTRLRTLMISGSGNFKTLTYL 182

Query: 289 EI------IDCPNFERLPD 301
            +      + C   E++PD
Sbjct: 183 PMSLTYLDLRCTGIEKIPD 201



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 38/156 (24%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  LE+  C +   +P     L+ L  L+I                        NC++L
Sbjct: 73  NLERLELSYCKSLVEIPSSFSELRKLETLVI-----------------------HNCTKL 109

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFP----EIPFCNIDGSGIERIPSSVLKLNKCSKL 399
           E +  ++  L S++   +  CS LK FP     I    ID + +E +P+S++    C++L
Sbjct: 110 EVV-PTLINLASLDFFNMHGCSQLKKFPGISTHISRLVIDDTLVEELPTSII---LCTRL 165

Query: 400 ESLP-SSLCMFKSLTSLEI------IDCKKLERLPD 428
            +L  S    FK+LT L +      + C  +E++PD
Sbjct: 166 RTLMISGSGNFKTLTYLPMSLTYLDLRCTGIEKIPD 201


>gi|421092564|ref|ZP_15553301.1| leucine rich repeat protein [Leptospira borgpetersenii str.
            200801926]
 gi|410364664|gb|EKP15680.1| leucine rich repeat protein [Leptospira borgpetersenii str.
            200801926]
          Length = 1608

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 158/304 (51%), Gaps = 37/304 (12%)

Query: 328  QLALLSKLELKNCSELEYISSSIFKLKSVESIEI-----------SNCSNLKGFPEIPFC 376
            +L   +KLE    +E    +S + +LK+++ IE+           ++C+ L+   E+   
Sbjct: 1139 ELKFFTKLEELTITESVKDTSVLAELKNLKKIELHKWNVKDLVILNSCTQLE---EVILK 1195

Query: 377  NIDGSGIERIPSSVLKLNKC--------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            NI+G   +   S +LK +K         +K E LP ++  F+SLTSL +I C+ LE LP+
Sbjct: 1196 NIEGFESDFDCSGLLKESKAKIVLDFSQNKFERLPDAVTTFQSLTSLSLIGCELLE-LPE 1254

Query: 429  ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
             +GNL+ L EL +    +  +P SL  L  L++L +   + F ++P  +   K+L  L +
Sbjct: 1255 SMGNLKRLTELDLSQNKLTSLPASLGSLDQLTRLYID-SNQFSTIPEPVLSLKNLKRLSV 1313

Query: 488  IDCKNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
              C N +  LPD IGNL  L  L      +  +P S+  LSSL+ LVLS N     PE +
Sbjct: 1314 --CWNRISSLPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPI 1371

Query: 547  NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP--SEFT 604
              LS+L +L L  N +  +PE++D L  LK LD+ EN L      + S P SI   ++  
Sbjct: 1372 LHLSNLETLDLGENPIRSLPEKIDSLFYLKSLDI-ENTL------VESLPESIEKLTQLE 1424

Query: 605  SLRL 608
            +LRL
Sbjct: 1425 TLRL 1428



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 181/403 (44%), Gaps = 62/403 (15%)

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
            N KN+PK+T   + S+  +           +K  + + EL I    +    +S + +L+ 
Sbjct: 1116 NHKNIPKITQLSIGSSDKISSF------QELKFFTKLEELTITESVK---DTSVLAELKN 1166

Query: 230  LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
            L+ I +H+      + + SC             E+ LK     ES      + K   +  
Sbjct: 1167 LKKIELHKWNVKDLVILNSCT---------QLEEVILKNIEGFESDFDCSGLLKESKAKI 1217

Query: 290  IIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
            ++D     FERLPD +   Q+L  L + G  + ELPE +G L  L++L+L          
Sbjct: 1218 VLDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDL---------- 1267

Query: 348  SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
             S  KL S+        ++L    ++    ID +    IP  VL L    +L     S+C
Sbjct: 1268 -SQNKLTSL-------PASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRL-----SVC 1314

Query: 408  MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKC 466
                          ++  LPD +GNL +L +L      +  +P S+  L +L +L L K 
Sbjct: 1315 ------------WNRISSLPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSK- 1361

Query: 467  SSFESLPSRLYVSKSLTSLEIIDC-KNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLG 524
            + F   P  +     L++LE +D  +N +R LP++I +L YLK L I+ T +  +PES+ 
Sbjct: 1362 NKFSDFPEPIL---HLSNLETLDLGENPIRSLPEKIDSLFYLKSLDIENTLVESLPESIE 1418

Query: 525  QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
            +L+ LE L L  + L+ +P+ L+ + SL  +   +    ++ +
Sbjct: 1419 KLTQLETLRLKGSKLKEVPDFLDNMESLRKITFESEEFNKLKQ 1461


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 158/302 (52%), Gaps = 27/302 (8%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            E LP E+G++ +L +L +    ++ +P+ +G L  L +L L+N S LE I   + KL  
Sbjct: 167 LESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNS-LERIPMELGKLSQ 225

Query: 356 VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCM 408
           +E++ + +  +L               I  +P+++ +  K        ++L S+P  +  
Sbjct: 226 LEALMLDHNKDL---------------INSLPANIGRCEKLKELWLSDNRLTSMPVVIEA 270

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           F  +  L+++   ++E LP ++G L +L+EL +    +  +P  +  LA  +  L   + 
Sbjct: 271 FTQIEVLKLVG-NRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNR 329

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFM-RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
            + +P  +    SLT L +   KN +  LP+EIG+L+ L+        I+ +P S+G+L 
Sbjct: 330 LQRIPVEIQNLTSLTYLNV--GKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLL 387

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
            L+ L  S+N L  +P+S+ +L+SL  L L+ NNLE +P  +  L++LK L L+ N L  
Sbjct: 388 KLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTI 447

Query: 588 IP 589
           +P
Sbjct: 448 LP 449



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 247/538 (45%), Gaps = 69/538 (12%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           ++   NL  LK+  + +T L   +  L+ L  + +  +K+    P++    NL  L + Y
Sbjct: 63  VVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISY 122

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN-LKNLP-KMT 178
            +  T+    I  + KLE L  D   S+T L          +L LR  +N L++LP +M 
Sbjct: 123 -NDFTKLTPVIGQMTKLESLKADN-NSITHL-----IPEFGKLDLRLSNNQLESLPTEMG 175

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
           S    + L L    ++ +P  I  L N+ EL + +   LE I   + KL  LE++ +   
Sbjct: 176 SMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQN-NSLERIPMELGKLSQLEALMLDHN 234

Query: 239 PNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--F 296
            +L    +P+      + KE   S+ +L   P          + ++ T +E++       
Sbjct: 235 KDL-INSLPANIGRCEKLKELWLSDNRLTSMP---------VVIEAFTQIEVLKLVGNRI 284

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKL------------ELKNCSELE 344
           E LP ++G L +L  L +    +  LP  +G LA L K+            E++N + L 
Sbjct: 285 EELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLT 344

Query: 345 YISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPS 404
           Y++    +L S+ + EI +  NL+ F          + I+ IPSS+ +L K         
Sbjct: 345 YLNVGKNRLPSLPN-EIGDLDNLEEF------RTHHNQIQAIPSSIGRLLK--------- 388

Query: 405 SLCMFKSLTSLEIIDC--KKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKL 461
                     L+I+D    +L  LPD +G L +L  L +    +  +P ++  L AL KL
Sbjct: 389 ----------LKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKL 438

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREV 519
            L + +    LP  L V K LT+LE +D +      LP  +GNL+ L    +   A+ ++
Sbjct: 439 LLYR-NKLTILP--LTVGK-LTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKL 494

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
           P S+G L SL  L L +N L I+P S+N L +L  L LS N L  +P  ++ L++L+ 
Sbjct: 495 PPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQV 552



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 42/355 (11%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           ESLP+      SLT L++      + +P E+G+L+ L  L +   ++  +P  LG+L+ L
Sbjct: 168 ESLPTEMGSMTSLTQLKL-PFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQL 226

Query: 333 SKLELKNCSEL-EYISSSIFKLKSVESIEISNCS------NLKGFPEIPFCNIDGSGIER 385
             L L +  +L   + ++I + + ++ + +S+         ++ F +I    + G+ IE 
Sbjct: 227 EALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEE 286

Query: 386 IPSSVLKLNKC-------SKLESLPSSL--------------------CMFKSLTSLEII 418
           +P  +  L          ++L +LP  +                       ++LTSL  +
Sbjct: 287 LPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYL 346

Query: 419 DCKK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS--SFESLPS 474
           +  K  L  LP+E+G+L+ LEE R     I+ +P S+ +L   KLK+   S     +LP 
Sbjct: 347 NVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLL--KLKILDASENQLTTLPD 404

Query: 475 RLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVL 534
            +    SL  L++    N   LP  IGNL  LK L +    +  +P ++G+L++LE L L
Sbjct: 405 SIGELTSLAHLDL-AVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDL 463

Query: 535 SDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
             N L  +P  +  L +L+   L  N L ++P  +  L SL  L L EN L  +P
Sbjct: 464 QTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILP 518



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 147/343 (42%), Gaps = 63/343 (18%)

Query: 295 NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLK 354
           N   LP  +G L  L  L +    I  LP  +G+L  L KL + + ++   ++  I ++ 
Sbjct: 78  NLTNLPSAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRI-SYNDFTKLTPVIGQMT 136

Query: 355 SVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTS 414
            +ES++  N S     PE  F  +D           L+L+  ++LESLP+ +    SLT 
Sbjct: 137 KLESLKADNNSITHLIPE--FGKLD-----------LRLSN-NQLESLPTEMGSMTSLTQ 182

Query: 415 LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSF-ESL 472
           L++     L+ +P E+G+LE L EL ++   +  +P  L +L+ L  L L        SL
Sbjct: 183 LKL-PFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSL 241

Query: 473 PSRL--------------------YVSKSLTSLEIIDC---------------------- 490
           P+ +                     V ++ T +E++                        
Sbjct: 242 PANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELH 301

Query: 491 ---KNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
                   LP EIGNL  L+ + +    ++ +P  +  L+SL +L +  N L  +P  + 
Sbjct: 302 LAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIG 361

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            L +L   +  +N ++ IP  +  L  LK LD  EN L  +P+
Sbjct: 362 DLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPD 404



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 217/477 (45%), Gaps = 48/477 (10%)

Query: 68  VSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTET 127
           + L++  +++  L  ++ ++ SL ++ L ++ L T   ++   +NL  L L   +SL   
Sbjct: 158 LDLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTL-QNNSLERI 216

Query: 128 HSSIQYLNKLEVLDLDRCKSL-TSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCHLR-S 184
              +  L++LE L LD  K L  SLP +I   + LK L L   + L ++P +     +  
Sbjct: 217 PMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSD-NRLTSMPVVIEAFTQIE 275

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI-----RIHRCP 239
            L L+G  IEELP  I  L+++ EL + +  +L  +   I  L  LE +     R+ R P
Sbjct: 276 VLKLVGNRIEELPKQIGTLTSLKELHL-AWNQLTTLPVEIGNLANLEKMLLSHNRLQRIP 334

Query: 240 -NLQFL-EMPSCNIDGTRSKEQPSSELKLKKCP-------RPESLPSGQCMFKSLTSLEI 290
             +Q L  +   N+   R    P+    L           + +++PS       L  L+I
Sbjct: 335 VEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSS---IGRLLKLKI 391

Query: 291 IDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
           +D        LPD +G L +L  L +    +  LP  +G L  L KL L   ++L  +  
Sbjct: 392 LDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYR-NKLTILPL 450

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-SKLESLPSSLC 407
           ++ KL ++E++++   + L   P          G+  +  +++K N   + L  LP S+ 
Sbjct: 451 TVGKLTNLETLDLQ-TNRLTSLP---------PGVGNL-KNLMKFNLIQNALVKLPPSIG 499

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS 467
             +SLT L + +  +L  LP  +  L  L+ L +    + E+P  +  L      L+ C 
Sbjct: 500 SLESLTQLSLRE-NQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLT----TLQVC- 553

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLG 524
             + LP +  ++ SL  L I D      LP +IGN   L  L +    ++E+P ++G
Sbjct: 554 --QDLPQK-SLTPSLQVLTISDNA-LETLPVKIGNFRALTQLAVSNNQLKELPATIG 606



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 96/450 (21%), Positives = 180/450 (40%), Gaps = 115/450 (25%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNILHWENLVSLK 71
           P      T++ +LK  G++ + +   +  +   +  +  W+Q     + I +  NL  + 
Sbjct: 265 PVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKML 324

Query: 72  MPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSI 131
           +  +++ ++  ++QNL SL  +++  ++ L  LP+       EI DL         H+ I
Sbjct: 325 LSHNRLQRIPVEIQNLTSLTYLNVGKNR-LPSLPN-------EIGDLDNLEEFRTHHNQI 376

Query: 132 QY-------LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           Q        L KL++LD    + LT+LP SI                    ++TS    +
Sbjct: 377 QAIPSSIGRLLKLKILDASENQ-LTTLPDSIG-------------------ELTSL---A 413

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
            L L    +E LP +I  L+ + +LL+Y  K L  +  ++ KL  LE++ +         
Sbjct: 414 HLDLAVNNLEALPGTIGNLTALKKLLLYRNK-LTILPLTVGKLTNLETLDL--------- 463

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                                  +  R  SLP G                        +G
Sbjct: 464 -----------------------QTNRLTSLPPG------------------------VG 476

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           NL+ L +  +   A+ +LP  +G L  L++L L+  ++L  + +S+  L +++ + +S  
Sbjct: 477 NLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRE-NQLAILPASMNMLFNLQILSLS-- 533

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
                           + +  +P  +  L      + LP    +  SL  L I D   LE
Sbjct: 534 ---------------ANRLYELPPLIEDLTTLQVCQDLPQK-SLTPSLQVLTISD-NALE 576

Query: 425 RLPDELGNLEALEELRVEGTGIREVPKSLA 454
            LP ++GN  AL +L V    ++E+P ++ 
Sbjct: 577 TLPVKIGNFRALTQLAVSNNQLKELPATIG 606


>gi|93005766|ref|YP_580203.1| hypothetical protein Pcryo_0938 [Psychrobacter cryohalolentis K5]
 gi|92393444|gb|ABE74719.1| Leucine-rich repeat, typical subtype [Psychrobacter cryohalolentis
           K5]
          Length = 713

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 227/505 (44%), Gaps = 87/505 (17%)

Query: 166 RGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL--LIYSCKRLENISSS 223
           R  S+L NL K +S    S        I  LP   K  SN+ +L  L  S   L+++ + 
Sbjct: 32  RNASDLINLQKFSSVVYESDSSRTFRYINPLP---KAFSNLKKLKYLDLSNSDLKSVPAF 88

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           + KL  LE+++++    +  L      + G +  +  S+ +K+K      SLP      +
Sbjct: 89  LMKLNELETLKLNNNK-ISILPKSINKLKGLKYLD-VSTNIKIK------SLPESISELE 140

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           +L  L + +  N ++LPD +GNL+ LN L     +I  LP+                   
Sbjct: 141 NLEHLNLKNNYNLKKLPDLIGNLENLNLLHYSSNSIEILPQ------------------- 181

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLP 403
                SI  LK++ SIEI + S                  ++ P  +L   K S L    
Sbjct: 182 -----SINHLKNLTSIEIGSYSK-----------------DKFPDFILNQKKLSNLAFYI 219

Query: 404 SSLCMFKSLTSLEII-DCKKLERL----------PDELGNLEALEELRVEGTGIREVPKS 452
           +    F    +LEI+   + LERL          PD   +L+ ++ L ++     ++  S
Sbjct: 220 NFFDTFNISNTLEIVTQFQYLERLRLSGLDIKTIPDNFKDLKNIKYLDLDSNYNMKINNS 279

Query: 453 LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           L  L +L  L L+ C+  + L   +    +L SL + +C   + LP  IGNL+ L+ L I
Sbjct: 280 LFDLPSLEYLNLRNCN-LKKLSKNIENLTNLKSLNL-ECNELIELPSNIGNLQLLEKLDI 337

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
               I+ +PE++G L +L  L+++DN L+ +P+S++ LS+L  L  S N L  +P+ +  
Sbjct: 338 YNNKIKYLPENIGSLKNLVDLIITDNKLKCLPDSISSLSNLSYLDCSYNKLTTLPDSIGL 397

Query: 572 LSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSL----RLSVDLRNC 615
           +S+LK LD   N L  +P+ + S              T++P     L    ++ +D  N 
Sbjct: 398 MSNLKKLDCSYNELTTLPDSISSLSNLSHLNCRSNKLTTLPDSINKLCFIEKIYID-DNP 456

Query: 616 LKLDPNELSEI--IKDGWMKQSVNG 638
           +   PN ++EI  +K+ W+  + N 
Sbjct: 457 ITTLPNSMNEINSLKEFWIPVNDNA 481



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 218/454 (48%), Gaps = 69/454 (15%)

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           L+ LDL   S L    + +  LN+LE L L+  K ++ LP SI+  K LK L +     +
Sbjct: 72  LKYLDLS-NSDLKSVPAFLMKLNELETLKLNNNK-ISILPKSINKLKGLKYLDVSTNIKI 129

Query: 172 KNLPKMTS-------CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSI 224
           K+LP+  S        +L++   L     ++LP  I  L N+  LL YS   +E +  SI
Sbjct: 130 KSLPESISELENLEHLNLKNNYNL-----KKLPDLIGNLENLN-LLHYSSNSIEILPQSI 183

Query: 225 FKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQ-PSSELKLKKCPRPESLPSGQCMFK 283
             L+ L SI I                 G+ SK++ P   L  KK        +    F 
Sbjct: 184 NHLKNLTSIEI-----------------GSYSKDKFPDFILNQKKLSNLAFYINFFDTFN 226

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
              +LEI+               Q L RL + G  I+ +P+    L  +  L+L +   +
Sbjct: 227 ISNTLEIV------------TQFQYLERLRLSGLDIKTIPDNFKDLKNIKYLDLDSNYNM 274

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLN-KCSKLESL 402
           + I++S+F L S+E + + NC NLK   +          IE + +++  LN +C++L  L
Sbjct: 275 K-INNSLFDLPSLEYLNLRNC-NLKKLSK---------NIENL-TNLKSLNLECNELIEL 322

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLK 462
           PS++   + L  L+I +  K++ LP+ +G+L+ L +L +    ++ +P S++  +LS L 
Sbjct: 323 PSNIGNLQLLEKLDIYN-NKIKYLPENIGSLKNLVDLIITDNKLKCLPDSIS--SLSNLS 379

Query: 463 LKKCS--SFESLPSRLYVSKSLTSLEIIDC--KNFMRLPDEIGNLEYLKVLTIKGTAIRE 518
              CS     +LP  + +   +++L+ +DC       LPD I +L  L  L  +   +  
Sbjct: 380 YLDCSYNKLTTLPDSIGL---MSNLKKLDCSYNELTTLPDSISSLSNLSHLNCRSNKLTT 436

Query: 519 VPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           +P+S+ +L  +E + + DN +  +P S+N+++SL
Sbjct: 437 LPDSINKLCFIEKIYIDDNPITTLPNSMNEINSL 470



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 129/550 (23%), Positives = 224/550 (40%), Gaps = 141/550 (25%)

Query: 45  ELRYFEWHQFPLKTLN--ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           +L+Y +     LK++   ++    L +LK+  +K++ L   +  L  LK +D+  +  + 
Sbjct: 71  KLKYLDLSNSDLKSVPAFLMKLNELETLKLNNNKISILPKSINKLKGLKYLDVSTNIKIK 130

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
            LP+                       SI  L  LE L+L    +L  LP  I       
Sbjct: 131 SLPE-----------------------SISELENLEHLNLKNNYNLKKLPDLI------- 160

Query: 163 LVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL------------L 210
                     NL  +   H  S        IE LP SI  L N+  +             
Sbjct: 161 ---------GNLENLNLLHYSSN------SIEILPQSINHLKNLTSIEIGSYSKDKFPDF 205

Query: 211 IYSCKRLENISSSIFKLQFLESIRIHRCPNL--QFLEMPSCNIDGTRSKEQPSSELKLKK 268
           I + K+L N++   F + F ++  I     +  QF  +    + G   K  P +   LK 
Sbjct: 206 ILNQKKLSNLA---FYINFFDTFNISNTLEIVTQFQYLERLRLSGLDIKTIPDNFKDLKN 262

Query: 269 CPRPE-----SLPSGQCMFK--SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRE 321
               +     ++     +F   SL  L + +C N ++L   + NL  L  L ++   + E
Sbjct: 263 IKYLDLDSNYNMKINNSLFDLPSLEYLNLRNC-NLKKLSKNIENLTNLKSLNLECNELIE 321

Query: 322 LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGS 381
           LP  +G L LL KL++ N ++++Y+  +I  LK++  + I++                  
Sbjct: 322 LPSNIGNLQLLEKLDIYN-NKIKYLPENIGSLKNLVDLIITD------------------ 362

Query: 382 GIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDC--KKLERLPDELGNLEALEEL 439
                          +KL+ LP S+    SL++L  +DC   KL  LPD +G +  L++L
Sbjct: 363 ---------------NKLKCLPDSIS---SLSNLSYLDCSYNKLTTLPDSIGLMSNLKKL 404

Query: 440 RVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDE 499
                 +  +P S++  +LS L    C            S  LT+           LPD 
Sbjct: 405 DCSYNELTTLPDSIS--SLSNLSHLNCR-----------SNKLTT-----------LPDS 440

Query: 500 IGNLEYLKVLTIKGTAIREVPESLGQLSSLE--WLVLSDNNLQIIPESLNQLSSLVSLKL 557
           I  L +++ + I    I  +P S+ +++SL+  W+ ++DN L    + LN LS ++++ +
Sbjct: 441 INKLCFIEKIYIDDNPITTLPNSMNEINSLKEFWIPVNDNALS--SQVLNVLSQMINVSI 498

Query: 558 S--NNNLERI 565
              N NLE I
Sbjct: 499 IGLNENLEMI 508



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 21/148 (14%)

Query: 447 REVPKSLAQLALSKLKLKKCSS--FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +++P++ + L    + L+K SS  +ES  SR +             +    LP    NL+
Sbjct: 28  QDIPRNASDL----INLQKFSSVVYESDSSRTF-------------RYINPLPKAFSNLK 70

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNN-NLE 563
            LK L +  + ++ VP  L +L+ LE L L++N + I+P+S+N+L  L  L +S N  ++
Sbjct: 71  KLKYLDLSNSDLKSVPAFLMKLNELETLKLNNNKISILPKSINKLKGLKYLDVSTNIKIK 130

Query: 564 RIPERLDPLSSLKYLDLFEN-NLDRIPE 590
            +PE +  L +L++L+L  N NL ++P+
Sbjct: 131 SLPESISELENLEHLNLKNNYNLKKLPD 158


>gi|108740459|gb|ABG01585.1| disease resistance protein [Arabidopsis thaliana]
          Length = 394

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 190/399 (47%), Gaps = 52/399 (13%)

Query: 101 LTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYL 160
           L +LPDLS A NL  L L  CSSL +  S I     LE LDL+ C SL  LP+   +  L
Sbjct: 3   LKELPDLSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAFNL 62

Query: 161 KRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENI 220
           ++L+LR CSNL                       ELPSS     N+ E+ +Y C  L  +
Sbjct: 63  QKLLLRYCSNLV----------------------ELPSSXGNAINLREVDLYYCSSLIRL 100

Query: 221 SSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQC 280
            SSI     L  + ++ C NL  LE+PS   +    +     +L L++C +   LPS   
Sbjct: 101 PSSIGNAINLLILDLNGCSNL--LELPSSIGNAINLQ-----KLDLRRCAKLLELPSSIG 153

Query: 281 MFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKN 339
              +L +L + DC +   LP  +GN   L  + +   + + ELP  +G L  L +L LK 
Sbjct: 154 NAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKG 213

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC-SK 398
           CS+LE + ++I  L+S++ + +++CS LK FPE             I ++V  L  C + 
Sbjct: 214 CSKLEDLPTNI-NLESLDILVLNDCSMLKRFPE-------------ISTNVRALYLCGTA 259

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA- 457
           +E +P S+  +  L  L +     L   P     L+ +  L + G  I+EVP  + +++ 
Sbjct: 260 IEEVPLSIRSWPRLDELLMSYFDNLVEFPHV---LDIITNLDLSGKEIQEVPPLIKRISR 316

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
           L  L LK      SLP    +  SL  ++  DC++  RL
Sbjct: 317 LQTLILKGYRKVVSLPQ---IPDSLKWIDAEDCESLERL 352



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 165/372 (44%), Gaps = 63/372 (16%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYL 134
           S + +L   + N  +L+ +DL     L +LP    A NL+ L L YCS+L E  SS    
Sbjct: 24  SSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAFNLQKLLLRYCSNLVELPSSXGNA 83

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLP-------KMTSCHLRSTL 186
             L  +DL  C SL  LP+SI +   L  L L GCSNL  LP        +    LR   
Sbjct: 84  INLREVDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCA 143

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            LL     ELPSSI    N+  LL+  C  L  + SSI     L  + +  C NL  L +
Sbjct: 144 KLL-----ELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL 198

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
              N+       Q   EL LK C + E LP+     +SL  L + DC   +R P+   N+
Sbjct: 199 SIGNL-------QKLQELILKGCSKLEDLPT-NINLESLDILVLNDCSMLKRFPEISTNV 250

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSN 366
           +A   L + GTAI E+P           L +++   L+ +  S F              N
Sbjct: 251 RA---LYLCGTAIEEVP-----------LSIRSWPRLDELLMSYF-------------DN 283

Query: 367 LKGFPEI--PFCNIDGSG--IERIPSSVLKLNKCS--------KLESLPSSLCMFKSLTS 414
           L  FP +     N+D SG  I+ +P  + ++++          K+ SLP    +  SL  
Sbjct: 284 LVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKGYRKVVSLPQ---IPDSLKW 340

Query: 415 LEIIDCKKLERL 426
           ++  DC+ LERL
Sbjct: 341 IDAEDCESLERL 352



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 38/245 (15%)

Query: 319 IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNI 378
           ++ELP+ L     L KL L NCS L  + S I    ++E ++++ CS+L   P       
Sbjct: 3   LKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFG---- 57

Query: 379 DGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
           D   +++     L L  CS L  LPSS     +L  +++  C  L RLP  +GN   L  
Sbjct: 58  DAFNLQK-----LLLRYCSNLVELPSSXGNAINLREVDLYYCSSLIRLPSSIGNAINLLI 112

Query: 439 LRVEG-TGIREVPKSLAQ-LALSKLKLKKCSSF------------------------ESL 472
           L + G + + E+P S+   + L KL L++C+                            L
Sbjct: 113 LDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLEL 172

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIREVPESLGQLSSLEW 531
           PS +  + +L  + + +C N + LP  IGNL+ L+ L +KG + + ++P ++  L SL+ 
Sbjct: 173 PSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPTNI-NLESLDI 231

Query: 532 LVLSD 536
           LVL+D
Sbjct: 232 LVLND 236



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 65/336 (19%)

Query: 295 NFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISS--SIF 351
           N + LPD L     L +LI+   +++ +LP  +G    L  L+L  CS L  + S    F
Sbjct: 2   NLKELPD-LSTAINLRKLILSNCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSFGDAF 60

Query: 352 KLKSVESIEISNCSNLKGFP------------EIPFCNIDGSGIERIPSS--------VL 391
            L   + + +  CSNL   P            ++ +C    S + R+PSS        +L
Sbjct: 61  NL---QKLLLRYCSNLVELPSSXGNAINLREVDLYYC----SSLIRLPSSIGNAINLLIL 113

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-------- 443
            LN CS L  LPSS+    +L  L++  C KL  LP  +GN   L+ L ++         
Sbjct: 114 DLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELP 173

Query: 444 -----------------TGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSL 485
                            + + E+P S+  L  L +L LK CS  E LP+ + + +SL  L
Sbjct: 174 SSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPTNINL-ESLDIL 232

Query: 486 EIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPE 544
            + DC    R P+   N   ++ L + GTAI EVP S+     L+ L++S  +NL   P 
Sbjct: 233 VLNDCSMLKRFPEISTN---VRALYLCGTAIEEVPLSIRSWPRLDELLMSYFDNLVEFPH 289

Query: 545 SLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
            L+ ++   +L LS   ++ +P  +  +S L+ L L
Sbjct: 290 VLDIIT---NLDLSGKEIQEVPPLIKRISRLQTLIL 322


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 181/692 (26%), Positives = 264/692 (38%), Gaps = 143/692 (20%)

Query: 7    EIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEG--------------VPFTELRYFEWH 52
            EIQ    TF+KM +LRLLK         +  ++G              +P  ELRY  W 
Sbjct: 547  EIQFTTETFTKMNKLRLLKIHQDAKYDHIKEIDGDVHFPQVALPEDLKLPSFELRYLHWD 606

Query: 53   QFPLKTLNI-LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
             + LK L    H +NLV L +  S + QLW+  + L  LK I+L +S+ L + P  S+  
Sbjct: 607  GYSLKYLPPNFHPKNLVELNLRCSNIKQLWEGNKVLKKLKVINLNHSQRLMEFPSFSMMP 666

Query: 112  NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
            NLEIL L  C SL      I  L  L+ L    C  L   P     KY           +
Sbjct: 667  NLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFP---EIKY----------TM 713

Query: 172  KNLPKMTSCHLRSTLPLLGVGIEELP-SSIKCLSNIGELLIYSCKRL----ENISSSIFK 226
            KNL K         L L G  IE+LP SSI+ L  +  L +  CK L    ENI  S  +
Sbjct: 714  KNLKK---------LDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICLSSLR 764

Query: 227  LQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLT 286
            +  L    I            +  +  +        EL L  C   E          SL 
Sbjct: 765  VLHLNGSCI------------TPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLK 812

Query: 287  SLEIIDCPNF-ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELE- 344
             L++ +C    E +PD++  L +L  L + GT I ++P  +  L+ L  L L +C +L+ 
Sbjct: 813  ELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQG 872

Query: 345  --YISSSIFKLKSVESI-------------------EISNCSNLKGFPEIPF--CNIDGS 381
               + SS+  L   +S                    EI +     G+ +I F      G 
Sbjct: 873  SLKLPSSVRFLDGHDSFKSLSWQRWLWGFLFNCFKSEIQDVECRGGWHDIQFGQSGFFGK 932

Query: 382  GIE----RIPSSVLKLNKCSKLE-SLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
            GI     R+P  +   N  ++++  LP  +  ++    L    C     L + LG++  +
Sbjct: 933  GISIVIPRMPHWISYQNVGNEIKIELP--MDWYEDNDFLGFALCAVYVPLENTLGDVPTI 990

Query: 437  EEL----------------RVEGTGIREVPKSLAQLALSKLKLKKCSS--FESLPSRLYV 478
             E                 +      R+   S         K+ KC         S+L  
Sbjct: 991  GESSNQVWMTCYPQIAIQEKHRSNKWRQFAASFVGYVTGSFKVIKCGVTLIYEQKSKLLG 1050

Query: 479  SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIRE-------------------- 518
            S    S+   +C+          N E+ + L +  TAI E                    
Sbjct: 1051 SVENVSVTCSECQT---------NGEHEEKLCLGETAINELLNIECLSGIQNLCLRNCKR 1101

Query: 519  ---VPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSS 574
               +P  + +L SL     S  + LQ  PE    +  L  L+L   +L+ +P  +  L  
Sbjct: 1102 LESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQG 1161

Query: 575  LKYLDLFEN--NLDRIPE---YLRSFPTSIPS 601
            LKYLDL EN  NL  IP+    LRS  T I S
Sbjct: 1162 LKYLDL-ENCKNLLNIPDNICNLRSLETLIVS 1192



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 149/277 (53%), Gaps = 23/277 (8%)

Query: 311  RLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGF 370
            +L +  TAI EL   +  L+ +  L L+NC  LE + S I+KLKS+ +   S CS L+ F
Sbjct: 1071 KLCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSF 1129

Query: 371  PEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDEL 430
            PEI     +   I R     L+L+  S L+ LPSS+   + L  L++ +CK L  +PD +
Sbjct: 1130 PEI----TEDMKILR----ELRLDGTS-LKELPSSIQHLQGLKYLDLENCKNLLNIPDNI 1180

Query: 431  GNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI-- 487
             NL +LE L V G + + ++PK+L   +L++L+L   +  +S+  +L     L  L+I  
Sbjct: 1181 CNLRSLETLIVSGCSKLNKLPKNLG--SLTQLRLLCAARLDSMSCQLPSFSDLRFLKILN 1238

Query: 488  IDCKNFMR--LPDEIGNLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQIIP 543
            +D  N +   +  +I  L  L+ + +    + E  +P  +  LSSL+ L L  N+   IP
Sbjct: 1239 LDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIP 1298

Query: 544  ESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLD 579
              + QLS L  L LS+   L++IPE   P SSL+ LD
Sbjct: 1299 SGIGQLSKLKILDLSHCEMLQQIPEL--P-SSLRVLD 1332



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 42/255 (16%)

Query: 393  LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
            L  C +LESLPS +   KSLT+     C KL+  P+   +++ L ELR++GT ++E+P S
Sbjct: 1096 LRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSS 1155

Query: 453  LAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG---------- 501
            +  L  L  L L+ C +  ++P  +   +SL +L +  C    +LP  +G          
Sbjct: 1156 IQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCA 1215

Query: 502  --------------NLEYLKVLTIKGTAIRE--VPESLGQLSSLEWLVLSDNNLQ--IIP 543
                          +L +LK+L +  + +    +   +  L SLE + LS  NL    IP
Sbjct: 1216 ARLDSMSCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIP 1275

Query: 544  ESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSE 602
              +  LSSL +L L  N+   IP  +  LS LK LDL     L +IPE        +PS 
Sbjct: 1276 SEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPE--------LPS- 1326

Query: 603  FTSLRLSVDLRNCLK 617
              SLR+ +D   C++
Sbjct: 1327 --SLRV-LDAHGCIR 1338



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 186/448 (41%), Gaps = 89/448 (19%)

Query: 278 GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
           G   F  +   E +  P+FE           L  L  DG +++ LP       L+ +L L
Sbjct: 580 GDVHFPQVALPEDLKLPSFE-----------LRYLHWDGYSLKYLPPNFHPKNLV-ELNL 627

Query: 338 KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKLNKC 396
           + CS ++ +      LK ++ I +++   L  FP              +P+  +L L  C
Sbjct: 628 R-CSNIKQLWEGNKVLKKLKVINLNHSQRLMEFPSFSM----------MPNLEILTLEGC 676

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
             L+ LP  +   + L +L   DC KLE  P+    ++ L++L + GT I ++P      
Sbjct: 677 ISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIEKLPS----- 731

Query: 457 ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
                     SS E L       + L  L +  CKN + LP+ I  L  L+VL + G+ I
Sbjct: 732 ----------SSIEHL-------EGLEYLNLAHCKNLVILPENIC-LSSLRVLHLNGSCI 773

Query: 517 R---------------------EVPES----LGQLSSLEWLVLSDNNL--QIIPESLNQL 549
                                 EV E     +  LSSL+ L LS+  L  + IP+ + +L
Sbjct: 774 TPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRL 833

Query: 550 SSLVSLKLSNNNLERIPERLDPLSSLKYLDL-----FENNLDRIPEYLRSFPTSIPSEFT 604
           SSL +L LS  N+ ++P  +  LS LK+L L      + +L ++P  +R         F 
Sbjct: 834 SSLQALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQGSL-KLPSSVRFLDGH--DSFK 890

Query: 605 SLR----LSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQ 660
           SL     L   L NC K +  ++    + GW         +  K +      +P W  +Q
Sbjct: 891 SLSWQRWLWGFLFNCFKSEIQDVE--CRGGWHDIQFGQSGFFGKGISIVIPRMPHWISYQ 948

Query: 661 STGSTISLKTPQPTGY-NKLMGFAFCVV 687
           + G+ I ++ P      N  +GFA C V
Sbjct: 949 NVGNEIKIELPMDWYEDNDFLGFALCAV 976



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 19/227 (8%)

Query: 266  LKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
            L+ C R ESLPS     KSLT+     C   +  P+   +++ L  L +DGT+++ELP  
Sbjct: 1096 LRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSS 1155

Query: 326  LGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----------IPF 375
            +  L  L  L+L+NC  L  I  +I  L+S+E++ +S CS L   P+          +  
Sbjct: 1156 IQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCA 1215

Query: 376  CNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLE-RLP 427
              +D    +    S L+  K   L+       ++ S + +  SL  +++  C   E  +P
Sbjct: 1216 ARLDSMSCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIP 1275

Query: 428  DELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
             E+  L +L+ L ++G     +P  + QL+ L  L L  C   + +P
Sbjct: 1276 SEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIP 1322



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 48/268 (17%)

Query: 199  SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ-FLEMP-------SCN 250
            +I+CLS I  L + +CKRLE++ S I+KL+ L +     C  LQ F E+           
Sbjct: 1084 NIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELR 1143

Query: 251  IDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
            +DGT  KE PSS   L                + L  L++ +C N   +PD + NL++L 
Sbjct: 1144 LDGTSLKELPSSIQHL----------------QGLKYLDLENCKNLLNIPDNICNLRSLE 1187

Query: 311  RLIIDG-TAIRELPEGLGQLALL-----SKLELKNCSELEYISSSIFKLKSVESIEI--- 361
             LI+ G + + +LP+ LG L  L     ++L+  +C    +      K+ +++   +   
Sbjct: 1188 TLIVSGCSKLNKLPKNLGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDRSNLVHG 1247

Query: 362  ---SNCSNLKGFPEI--PFCNIDGSGIERIPSSVLKLN-------KCSKLESLPSSLCMF 409
               S+ S L    E+   +CN+   G   IPS +  L+       K +   S+PS +   
Sbjct: 1248 AIRSDISILYSLEEVDLSYCNLAEGG---IPSEICYLSSLQALYLKGNHFSSIPSGIGQL 1304

Query: 410  KSLTSLEIIDCKKLERLPDELGNLEALE 437
              L  L++  C+ L+++P+   +L  L+
Sbjct: 1305 SKLKILDLSHCEMLQQIPELPSSLRVLD 1332



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 21/238 (8%)

Query: 130  SIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMT-SCHLRSTLP 187
            +I+ L+ ++ L L  CK L SLP+ I+  K L      GCS L++ P++T    +   L 
Sbjct: 1084 NIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELR 1143

Query: 188  LLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL------ 241
            L G  ++ELPSSI+ L  +  L + +CK L NI  +I  L+ LE++ +  C  L      
Sbjct: 1144 LDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKN 1203

Query: 242  -----QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPE-------SLPSGQCMFKSLTSLE 289
                 Q   + +  +D    +    S+L+  K    +       ++ S   +  SL  ++
Sbjct: 1204 LGSLTQLRLLCAARLDSMSCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVD 1263

Query: 290  IIDCPNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            +  C   E  +P E+  L +L  L + G     +P G+GQL+ L  L+L +C  L+ I
Sbjct: 1264 LSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQI 1321



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 432  NLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK 491
            N E  E+L +  T I E+        +  L L+ C   ESLPS +Y  KSLT+     C 
Sbjct: 1065 NGEHEEKLCLGETAINELLNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCS 1124

Query: 492  NFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLS 550
                 P+   +++ L+ L + GT+++E+P S+  L  L++L L +  NL  IP+++  L 
Sbjct: 1125 KLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLR 1184

Query: 551  SLVSLKLSN-NNLERIPERLDPLSSLKYL 578
            SL +L +S  + L ++P+ L  L+ L+ L
Sbjct: 1185 SLETLIVSGCSKLNKLPKNLGSLTQLRLL 1213


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 238/537 (44%), Gaps = 112/537 (20%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ--NLEILDLGYCSSL 124
           +  L + G+++TQ+ + +  LV+L  +DL  ++L T++P+ S++Q  NL  LDL + + L
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQL-TQVPE-SISQLVNLTQLDLSH-NQL 57

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRS 184
           T+   SI  L  L  L+L     LT +P SI             S L NL K+       
Sbjct: 58  TQVPESITQLVNLTKLNLS-VNQLTQVPESI-------------SQLVNLTKLN------ 97

Query: 185 TLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFL 244
              L G  + ++  SI  L N+ +L + S  +L     SI +L  L  + + R    Q  
Sbjct: 98  ---LSGNQLTQVSESISQLVNLTQLSL-SGNQLTQFPESISQLVNLTQLSLSRNQLTQV- 152

Query: 245 EMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
                                      PES+        +LT L +       ++P+ + 
Sbjct: 153 ---------------------------PESI----SQLVNLTQLNL-SYNQLTQVPESIS 180

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            L  L +L +    + ++PE + QL  L++L L   ++L  +S SI +L ++  + +S  
Sbjct: 181 QLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLS-YNQLTQVSESISQLVNLTQLSLS-- 237

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS-------KLESLPSSLCMFKSLTSLEI 417
                          G+ + ++  S+ +L   +       KL  +P S+    +LT L +
Sbjct: 238 ---------------GNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSL 282

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLY 477
            D  +L ++ + +  L  L +L +    + +V +S++QL                     
Sbjct: 283 SD-NQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLV-------------------- 321

Query: 478 VSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN 537
              +LT L++       ++ + I  L  L  L +    + +VPES+ QL +L WL LSDN
Sbjct: 322 ---NLTQLDL-SSNQLTQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDN 377

Query: 538 NLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRS 594
            L  +PES++QL +L  L L  N +  IP+ L+ L +LK LDL +N L   PE L S
Sbjct: 378 QLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQNPLPISPEILGS 434



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 187/405 (46%), Gaps = 53/405 (13%)

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVE 357
           ++P+ +  L  L  L +    + ++PE + QL  L++L+L + ++L  +  SI +L ++ 
Sbjct: 13  QVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSH-NQLTQVPESITQLVNLT 71

Query: 358 SIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLE-------SLP 403
            + +S  + L   PE       +   N+ G+ + ++  S+ +L   ++L          P
Sbjct: 72  KLNLS-VNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFP 130

Query: 404 SSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLK 462
            S+    +LT L +    +L ++P+ +  L  L +L +    + +VP+S++QL  L++L 
Sbjct: 131 ESISQLVNLTQLSL-SRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLD 189

Query: 463 LKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPES 522
           L   +    +P  +    +LT L +       ++ + I  L  L  L++ G  + +V ES
Sbjct: 190 LS-VNKLTQVPESISQLVNLTQLNL-SYNQLTQVSESISQLVNLTQLSLSGNKLTQVSES 247

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE 582
           + QL +L  L LS N L  +PES++QL +L  L LS+N L ++ E +  L +L  LDL  
Sbjct: 248 ISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQLDLSS 307

Query: 583 NNLDRIPE----------------YLRSFPTSIPS--EFTSLRLSVDLRNCLKLDPNELS 624
           N L ++ E                 L     SI      T L LS+   N L   P  +S
Sbjct: 308 NQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSI---NKLTQVPESIS 364

Query: 625 EIIKDGWMKQSVNGETYITKSMY---------FPGN---EIPKWF 657
           +++   W+  S N  T + +S+            GN   EIP W 
Sbjct: 365 QLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWL 409



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 163/349 (46%), Gaps = 33/349 (9%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSL-EGVPFTELRYF--EWHQFPLKTLNILHWENLV 68
           P + S++  L  L   G++   +  S+ + V  T+L     +  QFP     I    NL 
Sbjct: 84  PESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPES---ISQLVNLT 140

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ--NLEILDLGYCSSLTE 126
            L +  +++TQ+ + +  LV+L +++L Y++ LT++P+ S++Q  NL  LDL   + LT+
Sbjct: 141 QLSLSRNQLTQVPESISQLVNLTQLNLSYNQ-LTQVPE-SISQLVNLTQLDLS-VNKLTQ 197

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNLPKMTSCHLRST 185
              SI  L  L  L+L   + LT +  SI     L +L L G    +    ++     + 
Sbjct: 198 VPESISQLVNLTQLNLSYNQ-LTQVSESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQ 256

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------ 233
           L L G  + ++P SI  L N+ +L + S  +L  +S SI +L  L  +            
Sbjct: 257 LSLSGNKLTQVPESISQLVNLTQLSL-SDNQLTQVSESISQLVNLTQLDLSSNQLTQVSE 315

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKK----CPRPESLPSGQCMFKSLTSLE 289
            I +  NL  L++ S  +  T+  E  S  + L +      +   +P       +LT L 
Sbjct: 316 SISQLVNLTQLDLSSNQL--TQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLN 373

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
           + D     ++P+ +  L  L +L + G  I E+P+ L +L  L +L+L+
Sbjct: 374 LSDN-QLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLR 421


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 248/561 (44%), Gaps = 86/561 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +      QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQDN---QFTTLPK 203

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +       P E+G L
Sbjct: 204 EIGQLQNLQTLNLSDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVFPKEIGQL 254

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L      I +L++++ +E+  N  
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLQNLQTLNLVN-NRLTVFPKEIGQLQNLQDLELLMNPL 313

Query: 366 NLKG-------FPE--IPFCNIDGSGIERI-------PSSVLKLNKCSK--LESLPSSLC 407
           +LK        FP+  +    +  +G+ R        P  V +L+   K   +S P  + 
Sbjct: 314 SLKERKRIQKLFPDSSLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVIL 373

Query: 408 MFKSLTSLEIIDC----------------------KKLERLPDELGNLEALEELRVEGTG 445
            F++L  L + DC                        L+++P E+G L  LE L +E   
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +  +PK + QL  L KL L + ++ +  P+ +   K L  L++     F   P EIG LE
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKLE 491

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L ++   +  +   +GQL +L+ L L+DN   ++P+ + +L  L +L L NN L  
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 565 IPERLDPLSSLKYLDLFENNL 585
           +P  +  L +L++L L  N L
Sbjct: 552 LPTEIGQLQNLQWLYLQNNQL 572



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 195/440 (44%), Gaps = 85/440 (19%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 86  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ D   F  L
Sbjct: 145 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQDN-QFTTL 201

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L      I +L++++ +
Sbjct: 202 PKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN-NRLTVFPKEIGQLQNLQML 260

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   ++L +L +++
Sbjct: 261 ----CS-----PE------------------------NRLTALPKEMGQLQNLQTLNLVN 287

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPKS-------L 453
             +L   P E+G L+ L++L             R++         +REV ++       L
Sbjct: 288 -NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNL 346

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           AQ   L + +L L+     +S P  +   ++L  L + DC  F  LP EI  L+ LK L 
Sbjct: 347 AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC-GFSTLPKEISLLKNLKYLA 405

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    ++++P  +GQL +LE L L  N L+ +P+ + QL +L  L L  N L+  P  ++
Sbjct: 406 LGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIE 465

Query: 571 PLSSLKYLDLFENNLDRIPE 590
            L  L+ LDL  N     P+
Sbjct: 466 QLKKLQKLDLSVNQFTTFPK 485



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 23/235 (9%)

Query: 398 KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP------K 451
           KL +LP  +   K+L  L +     L  LP E+G LE L+EL +    +   P      +
Sbjct: 59  KLTALPKEIGQLKNLQELNL-KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQ 117

Query: 452 SLAQLALSKLKL----KKCSSFESLPSRLYVSKSLTSL--EIIDCKNFMRL--------- 496
            L  L LS+ +L     +    ++L         LT+   EI   +N  +L         
Sbjct: 118 KLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 177

Query: 497 -PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
            P EIG L+ L+ L ++      +P+ +GQL +L+ L LSDN L  +P  + QL +L  L
Sbjct: 178 LPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQEL 237

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
            L NN L   P+ +  L +L+ L   EN L  +P+ +            + RL+V
Sbjct: 238 YLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTV 292


>gi|356495059|ref|XP_003516398.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1131

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 129/266 (48%), Gaps = 27/266 (10%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKN--KCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
           +Q++P+ F+KM++L+ + F  + +    +   L+  P  ELRY  W  +PL +L      
Sbjct: 551 LQLSPHVFNKMSKLQFVYFRKNFDVFPLLPRGLQSFP-AELRYLSWSHYPLISLPENFSA 609

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           ENLV   + GS V +LWD VQNL++LK + +     L +LPDLS A NLE L++  CS L
Sbjct: 610 ENLVIFDLSGSLVLKLWDGVQNLMNLKVLTVAGCLNLKELPDLSKATNLEFLEISSCSQL 669

Query: 125 TETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLP----KMTSC 180
              + SI  L KLE L    C SL +L +  H   LK L LRGC  L         M   
Sbjct: 670 LSMNPSILSLKKLERLSAHHC-SLNTLISDNHLTSLKYLNLRGCKALSQFSVTSENMIEL 728

Query: 181 HLRST-----------------LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            L  T                 L L+   IE LPSS + L+ +  L + S ++L  +S +
Sbjct: 729 DLSFTSVSAFPSTFGRQSNLKILSLVFNNIESLPSSFRNLTRLRYLSVESSRKLHTLSLT 788

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSC 249
                 LE +    C +L+ +  PS 
Sbjct: 789 ELPAS-LEVLDATDCKSLKTVYFPSI 813



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 158/378 (41%), Gaps = 79/378 (20%)

Query: 366 NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSK-LESLPSSLCMFKSLTSLEIIDCKK-- 422
           N   FP +P       G++  P+ +  L+     L SLP +     S  +L I D     
Sbjct: 572 NFDVFPLLP------RGLQSFPAELRYLSWSHYPLISLPENF----SAENLVIFDLSGSL 621

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKS 481
           + +L D + NL  L+ L V G   ++E+P       L  L++  CS   S+   +   K 
Sbjct: 622 VLKLWDGVQNLMNLKVLTVAGCLNLKELPDLSKATNLEFLEISSCSQLLSMNPSILSLKK 681

Query: 482 LTSLEIIDCK-NFMRLPDEIGNLEYLKV------------------LTIKGTAIREVPES 522
           L  L    C  N +   + + +L+YL +                  L +  T++   P +
Sbjct: 682 LERLSAHHCSLNTLISDNHLTSLKYLNLRGCKALSQFSVTSENMIELDLSFTSVSAFPST 741

Query: 523 LGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL------KLSNNNLERIPERLDPLSSLK 576
            G+ S+L+ L L  NN++ +P S   L+ L  L      KL   +L  +P      +SL+
Sbjct: 742 FGRQSNLKILSLVFNNIESLPSSFRNLTRLRYLSVESSRKLHTLSLTELP------ASLE 795

Query: 577 YLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEI--------I 627
            LD  +  +L  +      FP SI  +F   R  +   NCL+LD + L  I        +
Sbjct: 796 VLDATDCKSLKTV-----YFP-SIAEQFKENRREILFWNCLELDEHSLKAIGFNARINVM 849

Query: 628 KDGWMKQSVNGE-----------TYITKSMYFPGNEIPKWFRHQSTGSTISLK---TPQP 673
           K  +   S  GE           +Y  K +Y PG+ IP+W  +++T   + +    TP  
Sbjct: 850 KSAYHNLSATGEKNVDFYLRYSRSYQVKYVY-PGSSIPEWLEYKTTKDYLIIDLSSTPHS 908

Query: 674 TGYNKLMGFAFCVVVACS 691
           T    L+GF F  V+A S
Sbjct: 909 T----LLGFVFSFVIAES 922



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 19/196 (9%)

Query: 298 RLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
           +L D + NL  L  L + G   ++ELP+ L +   L  LE+ +CS+L  ++ SI  LK +
Sbjct: 624 KLWDGVQNLMNLKVLTVAGCLNLKELPD-LSKATNLEFLEISSCSQLLSMNPSILSLKKL 682

Query: 357 ESIEISNCS-----NLKGFPEIPFCNIDG----SGIERIPSSVLKLN-KCSKLESLPSSL 406
           E +   +CS     +      + + N+ G    S       ++++L+   + + + PS+ 
Sbjct: 683 ERLSAHHCSLNTLISDNHLTSLKYLNLRGCKALSQFSVTSENMIELDLSFTSVSAFPSTF 742

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT------GIREVPKSLAQLALSK 460
               +L  L ++    +E LP    NL  L  L VE +       + E+P SL  L  + 
Sbjct: 743 GRQSNLKILSLV-FNNIESLPSSFRNLTRLRYLSVESSRKLHTLSLTELPASLEVLDATD 801

Query: 461 LKLKKCSSFESLPSRL 476
            K  K   F S+  + 
Sbjct: 802 CKSLKTVYFPSIAEQF 817


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS-----KNKCMVHSLEGVPF--TELRYFEWHQ 53
           +S +  +++     F++M +L+LLK   S     K  C VH  +G  F   ELRY   H 
Sbjct: 532 LSHVKEKLRFETPAFARMNKLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHG 591

Query: 54  FPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
           + LK+L N  + ENLV L MP S V QLW   + +  LK IDL +S  LT+ P+ S   N
Sbjct: 592 YNLKSLPNDFNAENLVHLSMPHSYVQQLWKGSKGMEKLKSIDLSHSTRLTETPNFSGVVN 651

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNL 171
           LE L L  C SL + H+SI  LNKL++L+L  CK L SL  SI     L+ LV+ GC  L
Sbjct: 652 LEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKL 711

Query: 172 KNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNI 206
           K  P+ +    +   L      + E+PSS+  L N+
Sbjct: 712 KKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNL 747



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 174/403 (43%), Gaps = 63/403 (15%)

Query: 396  CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            C  L+SL  S+C   SL +L +  C KL++ P+ LG LE L+EL  + T + EVP S+  
Sbjct: 684  CKMLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGF 743

Query: 456  LA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGT 514
            L  L     +        PS +  ++S       D   F+ LP    ++  L  L     
Sbjct: 744  LKNLETFSFQGRKGPSPAPSSMLRTRS-------DSMGFI-LP----HVSGLSSLLKLNL 791

Query: 515  AIREVPESL-----GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLERIPER 568
            + R + +       G LSSL+ L+L+ NN   +P  ++QL  L  L+  N   L+ +PE 
Sbjct: 792  SDRNILDGARLSDLGLLSSLKILILNGNNFDTLPGCISQLFLLGWLESKNCQRLQALPEL 851

Query: 569  LDPLSSLKYLDLFE-NNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEII 627
              P SS+ Y+      +L+ +         S  S F+SL ++      LK  P   S++ 
Sbjct: 852  --P-SSIGYIGAHNCTSLEAV---------SNQSLFSSLMIAK-----LKEHPRRTSQLE 894

Query: 628  KDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVV 687
             D        G+     ++  PG+ IP W  +QS+G  +++K P        + FA CVV
Sbjct: 895  HDS------EGQLSAAFTVVAPGSGIPDWISYQSSGREVTVKLPPNWFTTYFLAFASCVV 948

Query: 688  V-------ACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHV 740
                    A S++E C         KC +F       S  YD +  S+      +ESDHV
Sbjct: 949  TSPSVLPYADSINELC--------TKCTVFYSTSSCVSSSYDVFPRSHAE--GRMESDHV 998

Query: 741  FLGSSIFAGENSCKRSDEFFFHIDR---SCCEVKKCGIHFVHA 780
            +L    F    +C       F  +    +   +K+CG+  V+ 
Sbjct: 999  WLRYVRFPISINCHEVTHIKFSFEMILGTSSAIKRCGVGLVYG 1041



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 34/73 (46%)

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
           + C   +SL    C   SL +L +  C   ++ P+ LG L+ L  L  D TA+ E+P  +
Sbjct: 682 RDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSM 741

Query: 327 GQLALLSKLELKN 339
           G L  L     + 
Sbjct: 742 GFLKNLETFSFQG 754


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 181/392 (46%), Gaps = 59/392 (15%)

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFE 297
           E P    D T++ + P        SE KLK  P+             L +L+++D  + +
Sbjct: 11  EEPGTYQDLTKALQNPLDVRVLDLSEQKLKALPKK---------IGQLKNLQMLDLSDNQ 61

Query: 298 R--LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
              LP E+  L+ L  L +    +  LP+ + QL  L  L+L+  ++L  +   I KL++
Sbjct: 62  LIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLR-SNQLTILPKEIGKLQN 120

Query: 356 VESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           ++ + +SN + L  FP+       + + N+  + I+ IP  + KL K   L  LP++   
Sbjct: 121 LQELYLSN-NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL-YLPNN--- 175

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCS 467
                        +L  LP E+G L+ L+ L +    I+ +P+ + +L  L  L L K +
Sbjct: 176 -------------QLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHK-N 221

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
              +LP  +   + L SL + D      LP EIG L+ LKVL +    +  +P+ +G L 
Sbjct: 222 QLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 280

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
           +L+ L L  N L  IP+ + QL +L  L L NN L  +P+ +  L +L+ L L  N L  
Sbjct: 281 NLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTT 340

Query: 588 IPEYLRSFP------------TSIPSEFTSLR 607
           IP+ +                T+IP E   L+
Sbjct: 341 IPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 161/321 (50%), Gaps = 26/321 (8%)

Query: 282 FKSLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            + L +L+++D        LP E+G LQ L  L +    +   P+ +G+L  L  L L +
Sbjct: 92  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-S 150

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++++ I   I KL+ ++S+ + N + L   P+       + +  +  + I+ +P  + K
Sbjct: 151 ANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEK 209

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   + L SL + D  +L  LP E+G L+ L+ L +    
Sbjct: 210 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQ 268

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGN 502
           +  +P+ +  L  L  L L   +   ++P  +     L +L+++D  N     LP EIG 
Sbjct: 269 LTTIPQEIGHLQNLQDLYLV-SNQLTTIPKEI---GQLQNLQMLDLGNNQLTILPKEIGK 324

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L+ L+ L +    +  +P+ +GQL +L+ L LS+N L  IP+ + QL +L  L LSNN L
Sbjct: 325 LQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 384

Query: 563 ERIPERLDPLSSLKYLDLFEN 583
             IP+ +  L +L+ L L  N
Sbjct: 385 ITIPKEIGQLQNLQTLYLRNN 405



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 203/483 (42%), Gaps = 100/483 (20%)

Query: 73  PGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQ 132
           PG+    L   +QN + ++ +DL   KL      +   +NL++LDL   + L      I+
Sbjct: 13  PGT-YQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLS-DNQLIILPKEIR 70

Query: 133 YLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG 192
            L  L++LDL R   L  LP  I               LKNL  +    LRS        
Sbjct: 71  QLKNLQMLDL-RSNQLIILPKEIRQ-------------LKNLQML---DLRSN------Q 107

Query: 193 IEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNID 252
           +  LP  I  L N+ EL + S  +L      I KLQ L+ +                N+ 
Sbjct: 108 LTILPKEIGKLQNLQELYL-SNNQLTTFPKEIGKLQKLQWL----------------NLS 150

Query: 253 GTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL 312
             + K  P    KL+K  +   LP+ Q     LT+L           P E+G LQ L  L
Sbjct: 151 ANQIKTIPKEIEKLQKL-QSLYLPNNQ-----LTTL-----------PQEIGKLQKLQWL 193

Query: 313 IIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
            +    I+ LP+ + +L  L  L L + ++L  +   I KL+ +ES+ + N + L   P+
Sbjct: 194 YLSYNQIKTLPQEIEKLQKLQWLYL-HKNQLTTLPQEIEKLQKLESLGLDN-NQLTTLPQ 251

Query: 373 -------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEII 418
                  +    ++ + +  IP  +  L          ++L ++P  +   ++L  L++ 
Sbjct: 252 EIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDL- 310

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
              +L  LP E+G L+ L+EL +    +  +PK + QL             ++L   LY+
Sbjct: 311 GNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL-------------QNL-QELYL 356

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
           S +              +P EIG L+ L+ L +    +  +P+ +GQL +L+ L L +N 
Sbjct: 357 SNN----------QLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQ 406

Query: 539 LQI 541
             I
Sbjct: 407 FSI 409



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 182/423 (43%), Gaps = 65/423 (15%)

Query: 45  ELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           ++R  +  +  LK L   I   +NL  L +  +++  L  +++ L +L+ +DL+ ++L+ 
Sbjct: 28  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLII 87

Query: 103 KLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKR 162
              ++   +NL++LDL   + LT     I  L  L+ L L   + LT+ P  I      +
Sbjct: 88  LPKEIRQLKNLQMLDL-RSNQLTILPKEIGKLQNLQELYLSNNQ-LTTFPKEIGKLQKLQ 145

Query: 163 LVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
            +    + +K +PK +       +L L    +  LP  I  L  + + L  S  +++ + 
Sbjct: 146 WLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL-QWLYLSYNQIKTLP 204

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
             I KLQ L+ + +H+    Q   +P                 +++K  + ESL      
Sbjct: 205 QEIEKLQKLQWLYLHKN---QLTTLPQ----------------EIEKLQKLESLG----- 240

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
                    +D      LP E+G LQ L  L ++   +  +P+ +G L  L  L L   +
Sbjct: 241 ---------LDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLV-SN 290

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
           +L  I   I +L++++ +++ N                 + +  +P  + KL        
Sbjct: 291 QLTTIPKEIGQLQNLQMLDLGN-----------------NQLTILPKEIGKLQNLQELYL 333

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             ++L ++P  +   ++L  L  +   +L  +P E+G L+ L+EL +    +  +PK + 
Sbjct: 334 SNNQLTTIPKEIGQLQNLQEL-YLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIG 392

Query: 455 QLA 457
           QL 
Sbjct: 393 QLQ 395


>gi|297791249|ref|XP_002863509.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309344|gb|EFH39768.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1133

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 153/335 (45%), Gaps = 58/335 (17%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKF--------CGSKNKCMVHSLEGVPFTELRYFEWH 52
           +S++  EI ++     KM  LR LKF        C +  K  +     +P  E+R F W 
Sbjct: 559 LSEVQDEISLDREHLKKMRNLRYLKFYNSHCHQECKTNAKINIPDELELPLKEVRCFHWL 618

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +FPLK + N  +  NLV LK+P SK+ +LWD V++   LK +DL +S LL+ L  LS A 
Sbjct: 619 KFPLKEVPNDFNPINLVDLKLPFSKIERLWDGVKDTPVLKWVDLNHSSLLSSLSGLSKAP 678

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           N                        L+ L+L+ C SL SL   + SK LK L L GC++ 
Sbjct: 679 N------------------------LQGLNLEGCTSLESL-GDVDSKSLKTLTLSGCTSF 713

Query: 172 KNLP----KMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
           K  P     + + HL  T       I +LP +I  L  +  L +  CK LENI + + +L
Sbjct: 714 KEFPLIPENLEALHLDRT------AISQLPDNIVNLKKLVLLTMKDCKMLENIPTEVDEL 767

Query: 228 QFLESIRIHRCPNLQFLEMPSCN--------IDGTRSKEQPS----SELKLKKCPRPESL 275
             L+ + +  C  L+  E P+ N        +DGT  K  P       L L +      L
Sbjct: 768 TALQKLVLSGC--LKLKEFPAINKSPLKILFLDGTSIKTVPQLPSVQYLYLSRNDEISYL 825

Query: 276 PSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALN 310
           P+G      LT L++  C +   +P+   NL  L+
Sbjct: 826 PAGINQLFQLTWLDLKYCKSLTSIPELPPNLHYLD 860



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 163/376 (43%), Gaps = 51/376 (13%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L  C+ LESL       KSL +L +  C   +  P    NLEAL    ++ T I ++P
Sbjct: 683  LNLEGCTSLESLGD--VDSKSLKTLTLSGCTSFKEFPLIPENLEAL---HLDRTAISQLP 737

Query: 451  KSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVL 509
             ++  L  L  L +K C   E++P+ +    +L  L +  C      P    N   LK+L
Sbjct: 738  DNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLKEFP--AINKSPLKIL 795

Query: 510  TIKGTAIREVPESLGQLSSLEWLVLSDNN-LQIIPESLNQLSSLVSLKLSN-NNLERIPE 567
             + GT+I+ VP    QL S+++L LS N+ +  +P  +NQL  L  L L    +L  IPE
Sbjct: 796  FLDGTSIKTVP----QLPSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKSLTSIPE 851

Query: 568  RLDPLSSLKYLDLFE-NNLDRIPEYL-RSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSE 625
             L P  +L YLD    ++L  + + L R  PT           S +  NC KL+     E
Sbjct: 852  -LPP--NLHYLDAHGCSSLKTVAKPLARILPT------VQNHCSFNFTNCCKLEQAAKDE 902

Query: 626  IIKDG--------WMKQSVNG--ETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTG 675
            I            + ++  NG   +    S  FPG E+P WF H++ GS +  K P    
Sbjct: 903  ITLYSQRKCQLLSYARKHYNGGLSSEALFSTCFPGCEVPSWFCHEAVGSLLGRKLPPHWH 962

Query: 676  YNKLMGFAFCVVVA--------CSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSS 727
              KL G + C VV+         S S  C      +D+    F   C   S   D     
Sbjct: 963  EKKLSGISLCAVVSFPAGQNQISSFSVTCTFNIKAEDKSWIPF--TCPVGSWTRDG---- 1016

Query: 728  YLGKISHVESDHVFLG 743
               K   +ESDHVF+ 
Sbjct: 1017 --DKKDKIESDHVFIA 1030



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 18/203 (8%)

Query: 264 LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELP 323
           L L+ C   ESL  G    KSL +L +  C +F+  P    NL+AL+   +D TAI +LP
Sbjct: 683 LNLEGCTSLESL--GDVDSKSLKTLTLSGCTSFKEFPLIPENLEALH---LDRTAISQLP 737

Query: 324 EGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI-----PFCNI 378
           + +  L  L  L +K+C  LE I + + +L +++ + +S C  LK FP I         +
Sbjct: 738 DNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLKEFPAINKSPLKILFL 797

Query: 379 DGSGIERIPS----SVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           DG+ I+ +P       L L++  ++  LP+ +     LT L++  CK L  +P+   NL 
Sbjct: 798 DGTSIKTVPQLPSVQYLYLSRNDEISYLPAGINQLFQLTWLDLKYCKSLTSIPELPPNLH 857

Query: 435 ALEELRVEG-TGIREVPKSLAQL 456
            L+     G + ++ V K LA++
Sbjct: 858 YLD---AHGCSSLKTVAKPLARI 877


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 249/559 (44%), Gaps = 86/559 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTVLPKEIGQLKNLQELNLKWN-LLTVLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +      QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQDN---QFTTLPK 203

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +       P E+G L
Sbjct: 204 EIGQLQNLQTLNLQDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVFPKEIGQL 254

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE-ISNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L      I +L++++ +E + N  
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLQNLQTLNLVN-NRLTVFPKEIGQLQNLQDLELLMNPL 313

Query: 366 NLKGFPEI----PFCNID-----GSGIERI-------PSSVLKLNKCSK--LESLPSSLC 407
           +LK    I    P  N+D      +G+ R        P  V +L+   K   +S P  + 
Sbjct: 314 SLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVIL 373

Query: 408 MFKSLTSLEIIDC------KKLERL----------------PDELGNLEALEELRVEGTG 445
            F++L  L + DC      K++ RL                P E+G L+ LE L +E   
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +  +PK + QL  L KL L + ++ +  P+ +   K L  L+ +    F   P EIG LE
Sbjct: 434 LERLPKEIGQLRNLQKLSLHQ-NTLKIFPAEIEQLKKLQKLD-LSVNQFTTFPKEIGKLE 491

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L  
Sbjct: 492 NLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 565 IPERLDPLSSLKYLDLFEN 583
           +P  +  L +L++L L  N
Sbjct: 552 LPTEIGQLQNLQWLYLQNN 570



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 205/469 (43%), Gaps = 97/469 (20%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 86  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ D   F  L
Sbjct: 145 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQDN-QFTTL 201

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L      I +L++++ +
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN-NRLTVFPKEIGQLQNLQML 260

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   ++L +L +++
Sbjct: 261 ----CS-----PE------------------------NRLTALPKEMGQLQNLQTLNLVN 287

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPKS-------L 453
             +L   P E+G L+ L++L             R++         +REV ++       L
Sbjct: 288 -NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNL 346

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           AQ   L + +L L+     +S P  +   ++L  L + DC  F  LP EI  L+ LK L 
Sbjct: 347 AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC-GFSTLPKEISRLKNLKYLA 405

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    ++ +P  +GQL +LE L L  N L+ +P+ + QL +L  L L  N L+  P  ++
Sbjct: 406 LGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIE 465

Query: 571 PLSSLKYLDLFENNLDRIPEYL------------RSFPTSIPSEFTSLR 607
            L  L+ LDL  N     P+ +            R+  T++P+E   L+
Sbjct: 466 QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 514



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 207/485 (42%), Gaps = 81/485 (16%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I   +NL  L +  +++T L  ++  L +L+ +DL+ ++  T   ++   QNL+ L+L  
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNL-Q 217

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MTS 179
            + L      I  L  L+ L L R   LT  P  I      +++    + L  LPK M  
Sbjct: 218 DNQLATLPVEIGQLQNLQELYL-RNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC- 238
                TL L+   +   P  I  L N           L+++   +  L   E  RI +  
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEIGQLQN-----------LQDLELLMNPLSLKERKRIQKLF 325

Query: 239 --PNLQFLEMPSCNI--DGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEIID 292
              NL   E+    +  +   ++E+P    EL L+     +S P     F++L  L + D
Sbjct: 326 PDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYD 385

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
           C  F  LP E+  L+ L  L +    ++ +P  +GQL  L  L L+  +ELE +   I +
Sbjct: 386 C-GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLE-ANELERLPKEIGQ 443

Query: 353 LKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSL 412
           L++++ + +   + LK FP         + IE++           KL+ L  S+  F + 
Sbjct: 444 LRNLQKLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLSVNQFTT- 482

Query: 413 TSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESL 472
                         P E+G LE L+ L ++   +  +P  + QL                
Sbjct: 483 -------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL---------------- 513

Query: 473 PSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWL 532
                  K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQL +L+WL
Sbjct: 514 -------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 533 VLSDN 537
            L +N
Sbjct: 566 YLQNN 570


>gi|223403523|gb|ACM89261.1| disease resistance protein (TIR-NBS-LRR class) [Arabidopsis
           thaliana]
          Length = 1163

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 180/401 (44%), Gaps = 77/401 (19%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCGS---KNKCMVHSLEGV-----PFTELRYFEWH 52
           MSK+  E+  +   FS M  LR LK   S   K    +   + V     P  ++RY  W 
Sbjct: 605 MSKVPEEMTFDGNIFSNMCNLRYLKIYSSVCHKEGEGIFKFDTVREIQLPLDKVRYLHWM 664

Query: 53  QFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           ++P + L +  + ENLV L++P S + ++W+ V++   LK  +L YS  LT L  LS A+
Sbjct: 665 KYPWEKLPSDFNPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGLSNAK 724

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NLE L+L  C+SL +    ++ +  L  L++ RC SLT L  SI    LK L+L  CS L
Sbjct: 725 NLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCL-QSIKVSSLKILILSDCSKL 783

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +   ++ S +L   L L G  I+ LP +   L+ +  L +  C  LE++   +       
Sbjct: 784 EEF-EVISENLEE-LYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRL------- 834

Query: 232 SIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                                    K++   EL L  C + ES+P+              
Sbjct: 835 ------------------------GKQKALQELVLSGCSKLESVPT-------------- 856

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELP--EGLGQLALLSKLELKNCSELEYISSS 349
                      + +++ L  L++DGT IR++P  + L  L L   + + N      +  +
Sbjct: 857 ----------VVQDMKHLRILLLDGTRIRKIPKIKSLKCLCLSRNIAMVN------LQDN 900

Query: 350 IFKLKSVESIEISNCSNLKGFPEIPFC--NIDGSGIERIPS 388
           +     ++ + + NC NL+  P +P C   ++  G ER+ S
Sbjct: 901 LKDFYYLKCLVMKNCENLRYLPSLPKCLEYLNVYGCERLES 941



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 232/526 (44%), Gaps = 83/526 (15%)

Query: 296  FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            +E+LP +  N + L  L +  ++I+++ EG+    +L    L   S+L  +   +   K+
Sbjct: 668  WEKLPSDF-NPENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLG-LSNAKN 725

Query: 356  VESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSV-LKLNKCSKLESLPSSLCMFKSLTS 414
            +E + +  C++L   P+          +E + S V L + +C+ L  L S      SL  
Sbjct: 726  LERLNLEGCTSLLKLPQ---------EMENMKSLVFLNMRRCTSLTCLQS--IKVSSLKI 774

Query: 415  LEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLP 473
            L + DC KLE    E+ + E LEEL ++GT I+ +P +   L  L  L ++ C+  ESLP
Sbjct: 775  LILSDCSKLEEF--EVIS-ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLP 831

Query: 474  SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLV 533
             RL   K+L  L +  C     +P  + ++++L++L + GT IR++P    ++ SL+ L 
Sbjct: 832  KRLGKQKALQELVLSGCSKLESVPTVVQDMKHLRILLLDGTRIRKIP----KIKSLKCLC 887

Query: 534  LSDNNLQI-IPESLNQLSSLVSLKLSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEY 591
            LS N   + + ++L     L  L + N  NL  +P    P   L+YL+++        E 
Sbjct: 888  LSRNIAMVNLQDNLKDFYYLKCLVMKNCENLRYLPSL--P-KCLEYLNVYG------CER 938

Query: 592  LRSFPTSIPSE------FTSLRLSVDLRNCLKLDPNELSEI-IKDGWMKQSVNGETY--- 641
            L S    + S+         LR +    NC  L  +    I     W    +  E Y   
Sbjct: 939  LESVENPLVSDRLFLDGLEKLRSTFLFTNCHNLFQDAKDSISTYAKWKCHRLAVECYEQD 998

Query: 642  -ITKSMY---FPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLM-GFAFCVVVACSVSECC 696
             ++ + +   +PG  +P WF HQ+ GS +  +  +P  YN ++ G A C VV+       
Sbjct: 999  KVSGAFFNTCYPGYIVPSWFDHQAVGSVLEPRL-EPHWYNTMLSGIALCAVVSF------ 1051

Query: 697  RHESVEDDRKCNLFDVVCDRRSEGYDSYTS-----SYLGKISHVESDHVFLGSSIFAGEN 751
             HE+   D     F V C  + E  D             +   +E+DHVF+G        
Sbjct: 1052 -HEN--QDPIIGSFSVKCTLQFENEDGSLRFDCDIGCFNEPGMIEADHVFIGYV------ 1102

Query: 752  SCKRSDEFF-------------FHIDRSC-CEVKKCGIHFVHAQRQ 783
            +C R  +               FH+  +C  +V  CG   ++ Q +
Sbjct: 1103 TCSRLKDHHSIPIHHPTTVKMKFHLTDACKSKVVDCGFRLMYTQSR 1148



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 14/155 (9%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           SL  L + DC   E       NL+    L +DGTAI+ LP   G L  L  L ++ C+EL
Sbjct: 771 SLKILILSDCSKLEEFEVISENLE---ELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTEL 827

Query: 344 EYISSSIFKLKSVESIEISNCSNLKGFPEI-------PFCNIDGSGIERIPS----SVLK 392
           E +   + K K+++ + +S CS L+  P +           +DG+ I +IP       L 
Sbjct: 828 ESLPKRLGKQKALQELVLSGCSKLESVPTVVQDMKHLRILLLDGTRIRKIPKIKSLKCLC 887

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLP 427
           L++   + +L  +L  F  L  L + +C+ L  LP
Sbjct: 888 LSRNIAMVNLQDNLKDFYYLKCLVMKNCENLRYLP 922


>gi|297805930|ref|XP_002870849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316685|gb|EFH47108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1225

 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 29/311 (9%)

Query: 4    INSEIQINPYTFSKMTELRLLKFCG----SKNKCMV-HSLEGVPFTELRYFEWHQFPLKT 58
            ++ E+ IN   F  ++ L+ L+F G      NK  +   L  +P  +LR  EW  F +K 
Sbjct: 778  LSGELNINERAFEGLSNLKFLRFRGLYDGENNKLYLPQGLNNLP-QKLRILEWSCFQMKC 836

Query: 59   L-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILD 117
            L +    + LV + M  SK+  LW   Q L +LKR+ L  SK L +LP+LS A NLE L 
Sbjct: 837  LPSNFCTKYLVHIDMWNSKLQNLWQGNQPLGNLKRMYLAESKHLKELPNLSTATNLEKLT 896

Query: 118  LGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            L  CSSL E  SS+  L KL+ L L  C +L +LPT+I+ + L  L L  C  +K+ P++
Sbjct: 897  LFGCSSLAELPSSLGNLQKLQALSLRGCLNLEALPTNINLESLDYLDLTDCLLIKSFPEI 956

Query: 178  TSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS---IFKLQFLESIR 234
            ++   R  L L+   ++E+PS+IK  S++ +L +     L+    +   I KL F     
Sbjct: 957  STNIKR--LYLMKTAVKEVPSTIKSWSHLRKLEMSYNDNLKEFPHAFDIITKLYF----- 1009

Query: 235  IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP 294
                 +++  E+P      +R +      L L+ C R  +LP    +  SL+ + + +C 
Sbjct: 1010 ----NDVKIQEIPLWVKKISRLQ-----TLVLEGCKRLVTLPQ---LSDSLSQIYVENCE 1057

Query: 295  NFERLPDELGN 305
            + ERL     N
Sbjct: 1058 SLERLDFSFHN 1068



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 177/448 (39%), Gaps = 95/448 (21%)

Query: 382  GIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCK--KLERLPDELGNLEALEE 438
            G+  +P  +  L   C +++ LPS+ C  K L  +++ + K   L +    LGNL+ +  
Sbjct: 816  GLNNLPQKLRILEWSCFQMKCLPSNFCT-KYLVHIDMWNSKLQNLWQGNQPLGNLKRM-- 872

Query: 439  LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
               E   ++E+P       L KL L  CSS   LPS L                      
Sbjct: 873  YLAESKHLKELPNLSTATNLEKLTLFGCSSLAELPSSL---------------------- 910

Query: 499  EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD---------------------N 537
              GNL+ L+ L+++G    E   +   L SL++L L+D                      
Sbjct: 911  --GNLQKLQALSLRGCLNLEALPTNINLESLDYLDLTDCLLIKSFPEISTNIKRLYLMKT 968

Query: 538  NLQIIPESLNQLSSLVSLKLS-NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
             ++ +P ++   S L  L++S N+NL+  P   D ++ L + D+    +  IP +++   
Sbjct: 969  AVKEVPSTIKSWSHLRKLEMSYNDNLKEFPHAFDIITKLYFNDV---KIQEIPLWVKKIS 1025

Query: 597  -------------TSIPSEFTSLRLSVDLRNCLKLD---------PNELSEIIKDGWMKQ 634
                          ++P    SL   + + NC  L+         P   + ++     K 
Sbjct: 1026 RLQTLVLEGCKRLVTLPQLSDSLS-QIYVENCESLERLDFSFHNHPERSATLV--NCFKL 1082

Query: 635  SVNGETYITKSMYF---PGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVACS 691
            +     +I  +  F   P  E+P  F +++ GS I +   Q    +  + F  CV++   
Sbjct: 1083 NKEAREFIQTNSTFALLPAREVPANFTYRANGSIIMVNLNQRP-LSTTLRFKACVLLDKK 1141

Query: 692  VSECCRHESVEDDRKCNLFDVVCDRRSEG-YDS--YTSSYLGKISHVESDHVFLGSSIFA 748
            V       +    RK  +F  + ++   G Y S  Y + Y   +  +  +H+     IF 
Sbjct: 1142 VDNDKEEAAA---RKTVVFLRIREKGKIGIYVSWEYHNRYPFHVPPILREHLL----IFE 1194

Query: 749  GENSCKRSDEFF-FHIDRSCCEVKKCGI 775
             E     ++  F F I+ +   +K+CG+
Sbjct: 1195 SEADVTSNELLFSFDIEGNEAVIKECGV 1222



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 24/242 (9%)

Query: 269  CPRPESLPSGQCMFKSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGL 326
            C + + LPS  C  K L  +++ +    N  +    LGNL+ +   + +   ++ELP  L
Sbjct: 831  CFQMKCLPSNFCT-KYLVHIDMWNSKLQNLWQGNQPLGNLKRM--YLAESKHLKELP-NL 886

Query: 327  GQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP------EIPFCNI-D 379
                 L KL L  CS L  + SS+  L+ ++++ +  C NL+  P       + + ++ D
Sbjct: 887  STATNLEKLTLFGCSSLAELPSSLGNLQKLQALSLRGCLNLEALPTNINLESLDYLDLTD 946

Query: 380  GSGIERIPSSVLKLNKC----SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEA 435
               I+  P     + +     + ++ +PS++  +  L  LE+     L+  P      + 
Sbjct: 947  CLLIKSFPEISTNIKRLYLMKTAVKEVPSTIKSWSHLRKLEMSYNDNLKEFPHA---FDI 1003

Query: 436  LEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFM 494
            + +L      I+E+P  + +++ L  L L+ C    +LP    +S SL+ + + +C++  
Sbjct: 1004 ITKLYFNDVKIQEIPLWVKKISRLQTLVLEGCKRLVTLPQ---LSDSLSQIYVENCESLE 1060

Query: 495  RL 496
            RL
Sbjct: 1061 RL 1062



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 21/183 (11%)

Query: 263  ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRL-IIDGTAIRE 321
            +L L  C     LPS     + L +L +  C N E LP  + NL++L+ L + D   I+ 
Sbjct: 894  KLTLFGCSSLAELPSSLGNLQKLQALSLRGCLNLEALPTNI-NLESLDYLDLTDCLLIKS 952

Query: 322  LPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE----IPFCN 377
             PE    +  L  ++    + ++ + S+I     +  +E+S   NLK FP     I    
Sbjct: 953  FPEISTNIKRLYLMK----TAVKEVPSTIKSWSHLRKLEMSYNDNLKEFPHAFDIITKLY 1008

Query: 378  IDGSGIERIPSSVLKLNK--------CSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDE 429
             +   I+ IP  V K+++        C +L +LP    +  SL+ + + +C+ LERL   
Sbjct: 1009 FNDVKIQEIPLWVKKISRLQTLVLEGCKRLVTLPQ---LSDSLSQIYVENCESLERLDFS 1065

Query: 430  LGN 432
              N
Sbjct: 1066 FHN 1068


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 31/319 (9%)

Query: 282 FKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            K L +L+ +D  N  F+ LP E+G LQ L  L +    +  LP+ + QL  L  L L  
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNLQTLGL-G 125

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++L  +S  I +L++++ + ++N + L   P+       +    +  + I+ IP+ + +
Sbjct: 126 YNQLTTLSQEIGQLQNLKVLFLNN-NQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQ 184

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKS 452
           L    KL                  +D  +++ +P E+G L+ L+EL +    ++ +PK 
Sbjct: 185 LQNLQKL-----------------YLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKE 227

Query: 453 LAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI 511
           + QL  L  L L   +   +LP+ +   K+L +L++        LP EIG L+ L+ L++
Sbjct: 228 IEQLKNLQTLHLG-SNQLTTLPNEIEQLKNLQTLDLY-YNQLTTLPQEIGQLQNLQELSL 285

Query: 512 KGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDP 571
               +  +P+ +GQL +L+ L L +N L  +P  + QL +L SL L NN L  +P  +  
Sbjct: 286 YYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQ 345

Query: 572 LSSLKYLDLFENNLDRIPE 590
           L +LK LDL  N L  +P+
Sbjct: 346 LQNLKSLDLRNNQLTILPK 364



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 138/258 (53%), Gaps = 20/258 (7%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           L  E+G LQ L  L ++   +  LP+ + QL  L  L L N ++++ I + I++L++++ 
Sbjct: 132 LSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGN-NQIKIIPNGIWQLQNLQK 190

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPS 404
           + + + + +K  P+       +   N+  + ++ +P  + +L          ++L +LP+
Sbjct: 191 LYL-DYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPN 249

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   K+L +L++    +L  LP E+G L+ L+EL +    +  +PK + QL  L  L L
Sbjct: 250 EIEQLKNLQTLDLY-YNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDL 308

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
           +  +   +LP  +   ++L SL++ + +    LP EIG L+ LK L ++   +  +P+ +
Sbjct: 309 RN-NQLTTLPIEIGQLQNLKSLDLRNNQ-LTTLPIEIGQLQNLKSLDLRNNQLTILPKEI 366

Query: 524 GQLSSLEWLVLSDNNLQI 541
           GQL +L+ L L++N L I
Sbjct: 367 GQLKNLQELYLNNNQLSI 384



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 171/392 (43%), Gaps = 96/392 (24%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLG 119
           I   +NL SL +  ++   L  ++  L +L+ ++L ++  LT LP ++   +NL+ L LG
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNL-WNNQLTTLPKEIEQLKNLQTLGLG 125

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
           Y + LT     I  L  L+VL L+  + LT+LP  I               LKNL     
Sbjct: 126 Y-NQLTTLSQEIGQLQNLKVLFLNNNQ-LTTLPKEIEQ-------------LKNL----- 165

Query: 180 CHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------ 233
                TL L    I+ +P+ I  L N+ +L +    +++ I   I +LQ L+ +      
Sbjct: 166 ----QTLGLGNNQIKIIPNGIWQLQNLQKLYL-DYNQIKTIPKEIGQLQNLQELNLWNNQ 220

Query: 234 ------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTS 287
                  I +  NLQ L + S  +                      +LP+     K+L +
Sbjct: 221 LKTLPKEIEQLKNLQTLHLGSNQLT---------------------TLPNEIEQLKNLQT 259

Query: 288 LEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           L++        LP E+G LQ L  L +    +  LP+ +GQL  L  L+L+N ++L  + 
Sbjct: 260 LDLY-YNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRN-NQLTTLP 317

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
             I +L++++S+++ N                                 ++L +LP  + 
Sbjct: 318 IEIGQLQNLKSLDLRN---------------------------------NQLTTLPIEIG 344

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
             ++L SL++ +  +L  LP E+G L+ L+EL
Sbjct: 345 QLQNLKSLDLRN-NQLTILPKEIGQLKNLQEL 375



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
           +  +    LP EI  L+ LK L +     + +P+ +GQL +L+ L L +N L  +P+ + 
Sbjct: 55  LSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIE 114

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFPT 597
           QL +L +L L  N L  + + +  L +LK L L  N L  +P   E L++  T
Sbjct: 115 QLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQT 167


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 176/355 (49%), Gaps = 31/355 (8%)

Query: 245 EMPSCNIDGTRSKEQPS-------SELKLKKCPRP-ESLPSGQCMFKSLTSLEIIDCPNF 296
           E P   +D T + + P        SE KLK  P   E L + Q ++ S   L+       
Sbjct: 30  EEPKTYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKT------ 83

Query: 297 ERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSV 356
             LP E+G LQ L  L +    +  LP+ +G+L  L +L L N ++L  + + I +LK++
Sbjct: 84  --LPKEIGQLQNLRVLELIHNQLTTLPKEIGRLQNLQELYL-NYNQLTILPNEIGQLKNL 140

Query: 357 ESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLE 416
           + + + N + L   P+      +   ++ + +  L  N+ +   +LP  +   K+L   E
Sbjct: 141 QRLHLFN-NQLMTLPK------EIGQLKNLQTLYLWNNQLT---TLPKEIGQLKNLQVFE 190

Query: 417 IIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSR 475
           + +  +L  LP+E+G L+ L+ L +    +  +PK + QL  L  L L   + F  LP  
Sbjct: 191 L-NNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLG-YNQFTILPEE 248

Query: 476 LYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLS 535
           +   K+L  L + D + F  +P EIG L+ L+VL +     + +P+ +G+L +L+ L L 
Sbjct: 249 IGKLKNLQVLHLHDNQ-FKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLG 307

Query: 536 DNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            N  +IIP+ + QL +L  L L  N L  +P+ ++ L +L+ L L  N    +P+
Sbjct: 308 YNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPK 362



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 67/348 (19%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP+E+  L+ L RL +    ++ LP+ +GQL  L  LEL + ++L  +   I +L++++ 
Sbjct: 61  LPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIH-NQLTTLPKEIGRLQNLQE 119

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           + ++                                  ++L  LP+ +   K+L  L + 
Sbjct: 120 LYLN---------------------------------YNQLTILPNEIGQLKNLQRLHLF 146

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
           +  +L  LP E+G L+ L+ L +    +  +PK + QL       K    FE        
Sbjct: 147 N-NQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEIGQL-------KNLQVFE-------- 190

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
                    ++      LP+EIG L+ L+VL +    +  +P+ +GQL +L+WL L  N 
Sbjct: 191 ---------LNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQ 241

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTS 598
             I+PE + +L +L  L L +N  + IP+ +  L +L+ L L +N    IP+ +      
Sbjct: 242 FTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEI------ 295

Query: 599 IPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSM 646
              +  +L++     N  K+ P E+ ++    W+    N  T + K +
Sbjct: 296 --GKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEI 341



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 3/187 (1%)

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
           SL +F S T ++  + K    L + + N   +  L +    ++ +P  + QL  L +L L
Sbjct: 17  SLFLFCSFTFVQAEEPKTYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYL 76

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
              +  ++LP  +   ++L  LE+I  +    LP EIG L+ L+ L +    +  +P  +
Sbjct: 77  -SYNQLKTLPKEIGQLQNLRVLELIHNQ-LTTLPKEIGRLQNLQELYLNYNQLTILPNEI 134

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL +L+ L L +N L  +P+ + QL +L +L L NN L  +P+ +  L +L+  +L  N
Sbjct: 135 GQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNN 194

Query: 584 NLDRIPE 590
            L  +PE
Sbjct: 195 QLTTLPE 201



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 156/374 (41%), Gaps = 74/374 (19%)

Query: 12  PYTFSKMTE-------LRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTL--NIL 62
           P T+  +TE       +R+L     K K + + +E +   +  Y  ++Q  LKTL   I 
Sbjct: 32  PKTYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQ--LKTLPKEIG 89

Query: 63  HWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKL---------------------- 100
             +NL  L++  +++T L  ++  L +L+ + L Y++L                      
Sbjct: 90  QLQNLRVLELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQ 149

Query: 101 LTKLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY 159
           L  LP ++   +NL+ L L + + LT     I  L  L+V +L+  + LT+LP  I    
Sbjct: 150 LMTLPKEIGQLKNLQTLYL-WNNQLTTLPKEIGQLKNLQVFELNNNQ-LTTLPEEIGK-- 205

Query: 160 LKRLVLRGCSN--LKNLPKMTSCHLRSTLPLLGVGIEE---LPSSIKCLSNIGELLIYSC 214
           LK L +   +N  L  LPK         L  L +G  +   LP  I  L N+  L ++  
Sbjct: 206 LKNLQVLELNNNQLTTLPKEIGQ--LKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHD- 262

Query: 215 KRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPES 274
            + + I   I KL+ L+ + +H     QF  +P                 ++ K    + 
Sbjct: 263 NQFKIIPKEIGKLKNLQVLHLHDN---QFKIIPK----------------EIGKLKNLKM 303

Query: 275 LPSGQCMFK-------SLTSLEI--IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEG 325
           L  G   FK        L +L+   +D      LP E+  LQ L  L +     + LP+ 
Sbjct: 304 LSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKE 363

Query: 326 LGQLALLSKLELKN 339
           +GQL  L KL L N
Sbjct: 364 IGQLKNLKKLYLNN 377


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 132/253 (52%), Gaps = 20/253 (7%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           ++L +LP  +   K+L  L++ +  KL  LP E+  L  L+EL +    +  +PK + QL
Sbjct: 104 NRLATLPMEIGQLKNLQELDL-NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQL 162

Query: 457 A-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
             L  L L   +   +LP  +   ++L +L ++D +    LP EIG L+ L++L ++   
Sbjct: 163 QNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLLDNQ-LTTLPKEIGELQNLEILVLRENR 220

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           I  +P+ +GQL +L+WL L  N L  +P+ + QL +L  L L  N L  +P+ +  L +L
Sbjct: 221 ITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 280

Query: 576 KYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDPNEL 623
           + LDL +N L  +P+ +                T++P E   L+   +LR  L LD N+L
Sbjct: 281 QRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ---NLR-VLDLDNNQL 336

Query: 624 SEIIKDGWMKQSV 636
           + + K+    QS+
Sbjct: 337 TTLPKEVLRLQSL 349



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 36/358 (10%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G L+ L  L +   ++  LP+ +GQL  L +L+L + + L  +   I +LK+++ 
Sbjct: 63  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDL-HQNRLATLPMEIGQLKNLQE 121

Query: 359 IEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNK-------CSKLESLPS 404
           +++ N + L   P+       +   ++  + +  +P  + +L          ++L +LP 
Sbjct: 122 LDL-NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK 180

Query: 405 SLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL 463
            +   ++L +L ++D  +L  LP E+G L+ LE L +    I  +PK + QL  L  L L
Sbjct: 181 EIGELQNLKTLNLLD-NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDL 239

Query: 464 KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESL 523
            + +   +LP  +   ++L  L++        LP EIG L+ L+ L +    +  +P+ +
Sbjct: 240 HQ-NQLTTLPKEIGQLQNLQRLDL-HQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI 297

Query: 524 GQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           GQL +L+ L L +N L  +P+ + QL +L  L L NN L  +P+ +  L SL+ L L  N
Sbjct: 298 GQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN 357

Query: 584 NLDRIPEYLRSFP------------TSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKD 629
            L  +P+ +                T++P E   L+   +L  C  LD N+L+   K+
Sbjct: 358 RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQEL--C--LDENQLTTFPKE 411



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 180/398 (45%), Gaps = 44/398 (11%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTR 255
           LP  I  L N+ EL + S   L  +   + +L+ L+ + +H+   L  L M    +   +
Sbjct: 63  LPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLDLHQN-RLATLPMEIGQLKNLQ 120

Query: 256 SKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIID 315
             +  S++L         +LP      ++L  L++        LP E+G LQ L  L + 
Sbjct: 121 ELDLNSNKLT--------TLPKEIRQLRNLQELDL-HRNQLTTLPKEIGQLQNLKTLNLI 171

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
            T +  LP+ +G        EL+N   L  + + +  L      EI    NL+       
Sbjct: 172 VTQLTTLPKEIG--------ELQNLKTLNLLDNQLTTLPK----EIGELQNLE------I 213

Query: 376 CNIDGSGIERIPSSVLKLNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
             +  + I  +P  + +L          ++L +LP  +   ++L  L++    +L  LP 
Sbjct: 214 LVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDL-HQNQLTTLPK 272

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           E+G L+ L+ L +    +  +PK + QL  L +L L + +   +LP  +   + L +L +
Sbjct: 273 EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE-NQLTTLPKEI---EQLQNLRV 328

Query: 488 IDCKN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPES 545
           +D  N     LP E+  L+ L+VL +    +  +P+ +GQL +L+ L L  N L  +P+ 
Sbjct: 329 LDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKE 388

Query: 546 LNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFEN 583
           + QL +L  L L  N L   P+ +  L +L+ L L+ N
Sbjct: 389 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 68/421 (16%)

Query: 45  ELRYFEWHQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKL 104
           +LRY +    P +   I    NL  L +  + +T L  +V  L +L+R+DL  ++L T  
Sbjct: 54  DLRYQKLTILPKE---IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLP 110

Query: 105 PDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRL 163
            ++   +NL+ LDL   + LT     I+ L  L+ LDL R   LT+LP  I   + LK L
Sbjct: 111 MEIGQLKNLQELDLN-SNKLTTLPKEIRQLRNLQELDLHR-NQLTTLPKEIGQLQNLKTL 168

Query: 164 VLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISS 222
            L   + L  LPK +       TL LL   +  LP  I  L N+ E+L+    R+  +  
Sbjct: 169 NL-IVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNL-EILVLRENRITALPK 226

Query: 223 SIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMF 282
            I +LQ           NLQ+L++    +                      +LP      
Sbjct: 227 EIGQLQ-----------NLQWLDLHQNQLT---------------------TLPKEIGQL 254

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSE 342
           ++L  L+ +       LP E+G LQ L RL +    +  LP+ +GQ        L+N  E
Sbjct: 255 QNLQRLD-LHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ--------LQNLQE 305

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC------ 396
           L    + +  L      EI    NL+        ++D + +  +P  VL+L         
Sbjct: 306 LCLDENQLTTLPK----EIEQLQNLR------VLDLDNNQLTTLPKEVLRLQSLQVLALG 355

Query: 397 -SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQ 455
            ++L +LP  +   ++L  L +I   +L  LP E+G L+ L+EL ++   +   PK + Q
Sbjct: 356 SNRLSTLPKEIGQLQNLQVLGLI-SNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQ 414

Query: 456 L 456
           L
Sbjct: 415 L 415



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++ L ++   +  +P+ +GQL +L+ L LS N+L  +P+ + QL +L  L L  N L  +
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           P  +  L +L+ LDL  N L  +P+ +R  
Sbjct: 110 PMEIGQLKNLQELDLNSNKLTTLPKEIRQL 139


>gi|456891557|gb|EMG02262.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 646

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 158/304 (51%), Gaps = 37/304 (12%)

Query: 328 QLALLSKLELKNCSELEYISSSIFKLKSVESIEI-----------SNCSNLKGFPEIPFC 376
           +L   +KLE    +E    +S + +LK+++ IE+           ++C+ L+   E+   
Sbjct: 177 ELKFFTKLEELTITESVKDTSVLAELKNLKKIELHKWNVKDLVILNSCTQLE---EVILK 233

Query: 377 NIDGSGIERIPSSVLKLNKC--------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           NI+G   +   S +LK +K         +K E LP ++  F+SLTSL +I C+ LE LP+
Sbjct: 234 NIEGFESDFDCSGLLKESKAKIVLDFSQNKFERLPDAVTTFQSLTSLSLIGCELLE-LPE 292

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            +GNL+ L EL +    +  +P SL  L  L++L +   + F ++P  +   K+L  L +
Sbjct: 293 SMGNLKRLTELDLSQNKLTSLPASLGSLDQLTRLYID-SNQFSTIPEPVLSLKNLKRLSV 351

Query: 488 IDCKNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESL 546
             C N +  LPD IGNL  L  L      +  +P S+  LSSL+ LVLS N     PE +
Sbjct: 352 --CWNRISSLPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPI 409

Query: 547 NQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP--SEFT 604
             LS+L +L L  N +  +PE++D L  LK LD+ EN L      + S P SI   ++  
Sbjct: 410 LHLSNLETLDLGENPIRSLPEKIDSLFYLKSLDI-ENTL------VESLPESIEKLTQLE 462

Query: 605 SLRL 608
           +LRL
Sbjct: 463 TLRL 466



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 182/403 (45%), Gaps = 62/403 (15%)

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQF 229
           N KN+PK+T   + S+  +     +EL    K  + + EL I    +    +S + +L+ 
Sbjct: 154 NHKNIPKITQLSIGSSDKI--SSFQEL----KFFTKLEELTITESVK---DTSVLAELKN 204

Query: 230 LESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           L+ I +H+      + + SC             E+ LK     ES      + K   +  
Sbjct: 205 LKKIELHKWNVKDLVILNSCT---------QLEEVILKNIEGFESDFDCSGLLKESKAKI 255

Query: 290 IIDCPN--FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           ++D     FERLPD +   Q+L  L + G  + ELPE +G L  L++L+L          
Sbjct: 256 VLDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQN------- 308

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
               KL S+        ++L    ++    ID +    IP  VL L    +L     S+C
Sbjct: 309 ----KLTSL-------PASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRL-----SVC 352

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKC 466
                         ++  LPD +GNL +L +L      +  +P S+  L +L +L L K 
Sbjct: 353 ------------WNRISSLPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSK- 399

Query: 467 SSFESLPSRLYVSKSLTSLEIIDC-KNFMR-LPDEIGNLEYLKVLTIKGTAIREVPESLG 524
           + F   P  +     L++LE +D  +N +R LP++I +L YLK L I+ T +  +PES+ 
Sbjct: 400 NKFSDFPEPIL---HLSNLETLDLGENPIRSLPEKIDSLFYLKSLDIENTLVESLPESIE 456

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPE 567
           +L+ LE L L  + L+ +P+ L+ + SL  +   +    ++ +
Sbjct: 457 KLTQLETLRLKGSKLKEVPDFLDNMESLRKITFESEEFNKLKQ 499


>gi|22330441|ref|NP_176760.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6227009|gb|AAF06045.1|AC009513_1 Strong similarity to gb|AF098963 disease resistance protein
           RPP1-WsB from Arabidopsis thaliana and contains 2
           PF|00931 NB-ARC domains and 5 PF|00560 Leucine Rich
           Repeats [Arabidopsis thaliana]
 gi|332196311|gb|AEE34432.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1036

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 166/327 (50%), Gaps = 45/327 (13%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVPF--TELRYFEWHQFPL 56
           S+++SE+ I+   F  M  L+ L+F    G ++   ++  +G+ +   +L+  EW  FPL
Sbjct: 565 SELSSELNISERAFEGMPNLKFLRFYYRYGDESD-KLYLPQGLNYLSQKLKILEWDHFPL 623

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             + +    E LV L M  SK+ +LW+  + L +L  + L +SK+L +LPDLS A NL+ 
Sbjct: 624 TCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPDLSTATNLQE 683

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNL 174
           L L  CSSL E  SSI     L+ L L+ C SL  LP+SI + + L++L L GCS L+ L
Sbjct: 684 LFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVL 743

Query: 175 PK-----------MTSCHLRSTLP----------LLGVGIEELPSSIKCLSNIGEL-LIY 212
           P            +T C +    P          LL   I+E+PSSIK    + +L L Y
Sbjct: 744 PANINLESLDELDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSY 803

Query: 213 SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           +    +N+   +  L  + ++  +   +++  E+P      +R +      L L  C + 
Sbjct: 804 N----QNLKGFMHALDIITTMYFN---DIEMQEIPLWVKKISRLQ-----TLILNGCKKL 851

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERL 299
            SLP    +  SL+ L++++C + ERL
Sbjct: 852 VSLPQ---LPDSLSYLKVVNCESLERL 875



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 173/408 (42%), Gaps = 81/408 (19%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L KCS L  LPSS+    +L  L +  C  L  LP  +GNL  L++L + G       
Sbjct: 684  LFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNG------- 736

Query: 451  KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                           CS  E LP+ + + +SL  L++ DC    R P+   N++ LK+L 
Sbjct: 737  ---------------CSKLEVLPANINL-ESLDELDLTDCLVLKRFPEISTNIKVLKLLR 780

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
               T I+EVP S+     L  L LS N  Q +   ++ L  + ++  ++  ++ IP  + 
Sbjct: 781  ---TTIKEVPSSIKSWPRLRDLELSYN--QNLKGFMHALDIITTMYFNDIEMQEIPLWVK 835

Query: 571  PLSSLKYLDLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLD 619
             +S L+ L L       +L ++P+ L             +   F + ++S+   NCLKL+
Sbjct: 836  KISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLGFINCLKLN 895

Query: 620  PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQS-TGSTISL---KTPQPTG 675
                  II+              TK    PG E+P +F H++  GS++ +   + P  T 
Sbjct: 896  KEAKELIIQ------------ITTKCTVLPGREVPVYFTHRTKNGSSLRVNLNRRPLSTA 943

Query: 676  YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHV 735
                  F  C+++   V++ C+   V++     +F      R     SY    LG     
Sbjct: 944  SR----FKACILL---VNKYCKENEVKE-----VFG-----RKMMKASYCIIDLGLDVQC 986

Query: 736  ESDHVFLGSS------IFAGENSCKRSDEFF--FHIDRSCCEVKKCGI 775
               H FL  S      IF  E     S+E F  F +D +   +K+CGI
Sbjct: 987  RPTHHFLPPSLTEHLYIFDFEADVT-SNELFCDFQVDSNEMVIKECGI 1033



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 21/215 (9%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L ++ C +   LP  +G    L +L ++  T++ ELP  +G L  L KL L  CS+
Sbjct: 680 NLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSK 739

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE + ++I  L+S++ +++++C  LK FPEI   NI           VLKL + + ++ +
Sbjct: 740 LEVLPANI-NLESLDELDLTDCLVLKRFPEIS-TNI----------KVLKLLRTT-IKEV 786

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
           PSS+  +  L  LE+   + L+     +  L+ +  +      ++E+P  + +++ L  L
Sbjct: 787 PSSIKSWPRLRDLELSYNQNLKGF---MHALDIITTMYFNDIEMQEIPLWVKKISRLQTL 843

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            L  C    SLP    +  SL+ L++++C++  RL
Sbjct: 844 ILNGCKKLVSLPQ---LPDSLSYLKVVNCESLERL 875


>gi|357514703|ref|XP_003627640.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
 gi|355521662|gb|AET02116.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
          Length = 1151

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 93/177 (52%), Gaps = 7/177 (3%)

Query: 8   IQINPYTFSKMTELRLLKFCGSKNKCM----VHSLEGVPF--TELRYFEWHQFPLKTL-N 60
           I +N   F+KM  L++L F       M    VH LEGV F    LR F W  +PL +L +
Sbjct: 544 INLNSNAFTKMPNLKMLAFNDHHQDVMGFNSVHLLEGVDFFPNNLRSFGWSAYPLNSLPS 603

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
                NLV L +P S + +LW+  QN  SL+RIDL  S  L + P+ S A NL+ + L  
Sbjct: 604 NFSPSNLVELYLPYSNLEKLWNGAQNFPSLERIDLSKSARLLECPNFSNAPNLKHIKLEN 663

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
           C S+     SI  L KLE L++  CKSL SL +S  S+  +RL    C NL+    M
Sbjct: 664 CESICHVDPSIFNLPKLEDLNVSGCKSLKSLYSSTRSQSFQRLYAGECYNLQEFISM 720


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 246/560 (43%), Gaps = 88/560 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +    N QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQ---NNQFTILPK 203

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +      LP E+G L
Sbjct: 204 EIGQLQNLQTLNLQDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVLPKEIGQL 254

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L  +   I +L++++ +E+  N  
Sbjct: 255 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVN-NRLTVLPKEIGQLQNLQDLELLMNPL 313

Query: 366 NLKGFPEI----PFCNID-----GSGIER-------------------------IPSSVL 391
           +LK    I    P  N+D       G+ R                          P  +L
Sbjct: 314 SLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVIL 373

Query: 392 KLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           K     +L        +LP  +   K+L  L  +    L+++P E+G L  LE L +E  
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYL-ALGLNGLKKIPSEIGQLRNLEALNLEAN 432

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +PK + QL  L +L L + ++ +  P+ +   K L  L++     F   P EIG L
Sbjct: 433 ELERLPKEIGQLRNLQRLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKL 490

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           E L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L 
Sbjct: 491 ENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT 550

Query: 564 RIPERLDPLSSLKYLDLFEN 583
            +P  +  L +L++L L  N
Sbjct: 551 TLPTEIGQLQNLQWLYLQNN 570



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 223/519 (42%), Gaps = 121/519 (23%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 86  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ +   F  L
Sbjct: 145 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQNN-QFTIL 201

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L  +   I +L++++++
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN-NRLTVLPKEIGQLQNLQTL 260

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   K+L +L +++
Sbjct: 261 ----CS-----PE------------------------NRLTALPKEMGQLKNLQTLNLVN 287

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPK-------SL 453
             +L  LP E+G L+ L++L             R++         +REV +       +L
Sbjct: 288 -NRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNL 346

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC------------KNFM---- 494
           AQ   L +  L+L+  +  +  P  +   ++L  L + DC            KN      
Sbjct: 347 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 495 ------RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                 ++P EIG L  L+ L ++   +  +P+ +GQL +L+ L L  N L+I P  + Q
Sbjct: 407 GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQ 466

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFP--------- 596
           L  L  L LS N     P+ +  L +L+ L+L  N L  +P   E L++           
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQF 526

Query: 597 TSIPSEFTSLR--LSVDLRNC-LKLDPNELSEIIKDGWM 632
           T +P E   L+   ++DLRN  L   P E+ ++    W+
Sbjct: 527 TVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 210/486 (43%), Gaps = 83/486 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLG 119
           I   +NL  L +  +++T L  ++  L +L+ +DL+ ++  T LP ++   QNL+ L+L 
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQF-TILPKEIGQLQNLQTLNL- 216

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MT 178
             + L      I  L  L+ L L R   LT LP  I      + +    + L  LPK M 
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYL-RNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMG 275

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                 TL L+   +  LP  I  L N           L+++   +  L   E  RI + 
Sbjct: 276 QLKNLQTLNLVNNRLTVLPKEIGQLQN-----------LQDLELLMNPLSLKERKRIQKL 324

Query: 239 PNLQFLEMPSCNIDGTR-----SKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                L++     DG       ++E+P    +L+L+     +  P     F++L  L + 
Sbjct: 325 FPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLY 384

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           DC  F  LP E+  L+ L  L +    ++++P  +GQL  L  L L+  +ELE +   I 
Sbjct: 385 DC-GFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE-ANELERLPKEIG 442

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
           +L++++ + +   + LK FP         + IE++           KL+ L  S+  F +
Sbjct: 443 QLRNLQRLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLSVNQFTT 482

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES 471
                          P E+G LE L+ L ++   +  +P  + QL               
Sbjct: 483 --------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL--------------- 513

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
                   K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQL +L+W
Sbjct: 514 --------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQW 564

Query: 532 LVLSDN 537
           L L +N
Sbjct: 565 LYLQNN 570



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 158/322 (49%), Gaps = 42/322 (13%)

Query: 314 IDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           + G  +  LP+ +GQL  L +L LK  + L  +   I +L++++ +++ +          
Sbjct: 55  LSGEKLTALPKEIGQLKNLQELNLK-WNLLTTLPKEIGQLENLQELDLRD---------- 103

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
                                  ++L + P+ +   + L SL++ +  +L  LP+E+G L
Sbjct: 104 -----------------------NQLATFPAVIVELQKLESLDLSE-NRLIILPNEIGRL 139

Query: 434 EALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN 492
           + L++L +    +   PK + QL  L KL L + +   +LP  +   K+L +L++ + + 
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE-NRLTALPKEIGQLKNLQTLDLQNNQ- 197

Query: 493 FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSL 552
           F  LP EIG L+ L+ L ++   +  +P  +GQL +L+ L L +N L ++P+ + QL +L
Sbjct: 198 FTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNL 257

Query: 553 VSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDL 612
            +L    N L  +P+ +  L +L+ L+L  N L  +P+ +         E     LS+  
Sbjct: 258 QTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKE 317

Query: 613 RNCL-KLDPN---ELSEIIKDG 630
           R  + KL P+   +L E+ +DG
Sbjct: 318 RKRIQKLFPDSNLDLREVAEDG 339



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++VL + G  +  +P+ +GQL +L+ L L  N L  +P+ + QL +L  L L +N L   
Sbjct: 50  VRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATF 109

Query: 566 PERLDPLSSLKYLDLFENNLDRIP 589
           P  +  L  L+ LDL EN L  +P
Sbjct: 110 PAVIVELQKLESLDLSENRLIILP 133


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 249/559 (44%), Gaps = 86/559 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 55  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTVLPKEIGQLENLQELDL-RDNQLATFP 112

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 113 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 149

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +      QF  +P 
Sbjct: 150 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQDN---QFTILPK 205

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +       P E+G L
Sbjct: 206 EIGQLQNLQTLNLSDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVFPKEIGQL 256

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIE-ISNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L      I +L++++ +E + N  
Sbjct: 257 QNLQMLCSPENRLTALPKKMGQLQNLQTLNLVN-NRLTVFPKEIGQLQNLQDLELLMNPL 315

Query: 366 NLKGFPEI----PFCNID-----GSGIERI-------PSSVLKLNKCSK--LESLPSSLC 407
           +LK    I    P  N+D      +G+ R        P  V +L+   K   +S P  + 
Sbjct: 316 SLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVIL 375

Query: 408 MFKSLTSLEIIDC------KKLERL----------------PDELGNLEALEELRVEGTG 445
            F++L  L + DC      K++ RL                P E+G L+ LE L +E   
Sbjct: 376 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 435

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLE 504
           +  +PK + QL  L KL L + ++ +  P+ +   K L  L+ +    F   P EIG LE
Sbjct: 436 LERLPKEIGQLRNLQKLSLHQ-NTLKIFPAEIEQLKKLQKLD-LSVNQFTTFPKEIGKLE 493

Query: 505 YLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLER 564
            L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L  
Sbjct: 494 NLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 553

Query: 565 IPERLDPLSSLKYLDLFEN 583
           +P  +  L +L++L L  N
Sbjct: 554 LPTEIGQLQNLQWLYLQNN 572



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 205/469 (43%), Gaps = 97/469 (20%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 88  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 146

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ D   F  L
Sbjct: 147 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQDN-QFTIL 203

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L      I +L++++ +
Sbjct: 204 PKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN-NRLTVFPKEIGQLQNLQML 262

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   ++L +L +++
Sbjct: 263 ----CS-----PE------------------------NRLTALPKKMGQLQNLQTLNLVN 289

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPKS-------L 453
             +L   P E+G L+ L++L             R++         +REV ++       L
Sbjct: 290 -NRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNL 348

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
           AQ   L + +L L+     +S P  +   ++L  L + DC  F  LP EI  L+ LK L 
Sbjct: 349 AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC-GFSTLPKEISRLKNLKYLA 407

Query: 511 IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
           +    ++ +P  +GQL +LE L L  N L+ +P+ + QL +L  L L  N L+  P  ++
Sbjct: 408 LGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIE 467

Query: 571 PLSSLKYLDLFENNLDRIPEYL------------RSFPTSIPSEFTSLR 607
            L  L+ LDL  N     P+ +            R+  T++P+E   L+
Sbjct: 468 QLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLK 516



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 114/491 (23%), Positives = 202/491 (41%), Gaps = 121/491 (24%)

Query: 52  HQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +QF +    I   +NL +L +  +++  L  ++  L +L+ + L+ ++L     ++   Q
Sbjct: 198 NQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 257

Query: 112 NLEILDLGYCS---SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGC 168
           NL++L    CS    LT     +  L  L+ L+L   + LT  P  I             
Sbjct: 258 NLQML----CSPENRLTALPKKMGQLQNLQTLNLVNNR-LTVFPKEIGQ----------L 302

Query: 169 SNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
            NL++L  + +                 P S+K    I +L   S   L  ++ +     
Sbjct: 303 QNLQDLELLMN-----------------PLSLKERKRIQKLFPDSNLDLREVAEN----- 340

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSLT 286
                 ++R  NL              ++E+P    EL L+     +S P     F++L 
Sbjct: 341 -----GVYRNLNL--------------AQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 381

Query: 287 SLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
            L + DC  F  LP E+  L+ L  L +    ++ +P  +GQL  L  L L+  +ELE +
Sbjct: 382 GLNLYDC-GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLE-ANELERL 439

Query: 347 SSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSL 406
              I +L++++ + +   + LK FP         + IE++           KL+ L  S+
Sbjct: 440 PKEIGQLRNLQKLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLSV 479

Query: 407 CMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKC 466
             F +               P E+G LE L+ L ++   +  +P  + QL          
Sbjct: 480 NQFTT--------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL---------- 515

Query: 467 SSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQL 526
                        K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQL
Sbjct: 516 -------------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQL 561

Query: 527 SSLEWLVLSDN 537
            +L+WL L +N
Sbjct: 562 QNLQWLYLQNN 572



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 23/236 (9%)

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP------ 450
            KL +LP  +   K+L  L +     L  LP E+G LE L+EL +    +   P      
Sbjct: 60  EKLTALPKEIGQLKNLQELNL-KWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVEL 118

Query: 451 KSLAQLALSKLKL----KKCSSFESLPSRLYVSKSLTSL--EIIDCKNFMRL-------- 496
           + L  L LS+ +L     +    ++L         LT+   EI   +N  +L        
Sbjct: 119 QKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLT 178

Query: 497 --PDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVS 554
             P EIG L+ L+ L ++      +P+ +GQL +L+ L LSDN L  +P  + QL +L  
Sbjct: 179 ALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQE 238

Query: 555 LKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSV 610
           L L NN L   P+ +  L +L+ L   EN L  +P+ +            + RL+V
Sbjct: 239 LYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTV 294


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 160/355 (45%), Gaps = 33/355 (9%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEWHQFPLKTLNI 61
           S IN  I I+   F +M  LR L          V++   V   ++   E  +FP   L +
Sbjct: 493 SGINKVI-ISEGAFKRMRNLRFLS---------VYNTRYVKNDQVDIPEDLEFP-PHLRL 541

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
           L WE    L M  S++ +LW   Q L +LK++DL  S  L +LPDLS A NLE L+L YC
Sbjct: 542 LRWEAYPKLDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLSNATNLERLELSYC 601

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
            SL E  SS   L KLE L +  C  L  +PT I+   L    + GC  LK  P + S H
Sbjct: 602 KSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFNMHGCFQLKKFPGI-STH 660

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
           + S L +    +EELP+SI   + +  L+I      + ++     L +L+      C NL
Sbjct: 661 I-SRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDLRCTGGCRNL 719

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM--FKSLTSLEIIDC--PNFE 297
           + L             + P S   L  C   ESL S  C+    S   L   +C   N E
Sbjct: 720 KSL------------PQLPLSIRWLNACD-CESLESVACVSSLNSFVDLNFTNCFKLNQE 766

Query: 298 RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
              D +      +  I+ G   RE+PE     A  + L ++  S+ ++ +SS FK
Sbjct: 767 TRRDLIQQSFFRSLRILPG---REVPETFNHQAKGNVLTIRPESDSQFSASSRFK 818



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 43/305 (14%)

Query: 395 KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKSL 453
           K S+LE L        +L  +++     L+ LPD L N   LE L +     + E+P S 
Sbjct: 553 KESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSF 611

Query: 454 AQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIK 512
           ++L  L  L +  C+  E +P+ +    +L SL+  +     +L    G   ++  L I 
Sbjct: 612 SELRKLETLVIHNCTKLEVVPTLI----NLASLDFFNMHGCFQLKKFPGISTHISRLVID 667

Query: 513 GTAIREVPESLGQLSSLEWLVLSDNN----LQIIPESLNQLSSLVSLKLSNN--NLERIP 566
            T + E+P S+   + L  L++S +     L  +P SL  L     L+ +    NL+ +P
Sbjct: 668 DTLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLD----LRCTGGCRNLKSLP 723

Query: 567 ERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLR--NCLKLDPNELS 624
           +   PLS +++L+  +       E L S         +SL   VDL   NC KL+     
Sbjct: 724 QL--PLS-IRWLNACD------CESLESVAC-----VSSLNSFVDLNFTNCFKLNQETRR 769

Query: 625 EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAF 684
           ++I+          +++       PG E+P+ F HQ+ G+ ++++    + ++    F  
Sbjct: 770 DLIQ----------QSFFRSLRILPGREVPETFNHQAKGNVLTIRPESDSQFSASSRFKA 819

Query: 685 CVVVA 689
           C V++
Sbjct: 820 CFVIS 824



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 124/272 (45%), Gaps = 38/272 (13%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 567 LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIH 623

Query: 363 NCSNLKGFP------EIPFCNIDGS-GIERIPSSVLKLNKC----SKLESLPSSLCMFKS 411
           NC+ L+  P       + F N+ G   +++ P     +++     + +E LP+S+ +   
Sbjct: 624 NCTKLEVVPTLINLASLDFFNMHGCFQLKKFPGISTHISRLVIDDTLVEELPTSIILCTR 683

Query: 412 LTSLEII---DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSS 468
           L +L I    + K L  LP  L  L    +LR  G G R + KSL QL LS   L  C  
Sbjct: 684 LRTLMISGSGNFKTLTYLPLSLTYL----DLRCTG-GCRNL-KSLPQLPLSIRWLNACDC 737

Query: 469 FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIG----NLEYLKVLTIKGTAIREVPESLG 524
            ESL S   VS SL S   ++  N  +L  E         + + L I     REVPE+  
Sbjct: 738 -ESLESVACVS-SLNSFVDLNFTNCFKLNQETRRDLIQQSFFRSLRI--LPGREVPETFN 793

Query: 525 QLSSLEWLVLSDNNLQIIPESLNQLSSLVSLK 556
             +         N L I PES +Q S+    K
Sbjct: 794 HQA-------KGNVLTIRPESDSQFSASSRFK 818



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 95/259 (36%), Gaps = 63/259 (24%)

Query: 169 SNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ 228
           +NLK +    S HL+           ELP  +   +N+  L +  CK L  I SS  +L+
Sbjct: 568 TNLKKMDLTRSSHLK-----------ELPD-LSNATNLERLELSYCKSLVEIPSSFSELR 615

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            LE++ IH C  L                               E +P+      SL   
Sbjct: 616 KLETLVIHNCTKL-------------------------------EVVPT-LINLASLDFF 643

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            +  C   ++ P   G    ++RL+ID T + ELP  +     L  L +      + ++ 
Sbjct: 644 NMHGCFQLKKFP---GISTHISRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTY 700

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
               L  ++      C NLK  P++P              S+  LN C   ESL S  C+
Sbjct: 701 LPLSLTYLDLRCTGGCRNLKSLPQLPL-------------SIRWLNACD-CESLESVACV 746

Query: 409 --FKSLTSLEIIDCKKLER 425
               S   L   +C KL +
Sbjct: 747 SSLNSFVDLNFTNCFKLNQ 765


>gi|357499691|ref|XP_003620134.1| Resistance protein [Medicago truncatula]
 gi|355495149|gb|AES76352.1| Resistance protein [Medicago truncatula]
          Length = 1110

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 254/614 (41%), Gaps = 115/614 (18%)

Query: 14  TFSKMTELRLLKFCGSKNKCMVHSLEGVPFTELRYFEW-----HQFPLKTLNILHWENLV 68
            F KM  LR L F  S   C   + E +P   LR  E+     + +  +  N+  W+  +
Sbjct: 374 AFKKMKNLRTLIF--STPVCFSETSEHIP-NSLRVLEYSNRNRNYYHSRGSNLFEWDGFL 430

Query: 69  SLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETH 128
             K    KV               ++     LLT++PD+S   NLE   +  C+SL    
Sbjct: 431 KKKFGNMKV---------------LNYDCDTLLTRMPDISNLPNLEQFSIQDCTSLITID 475

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLR--STL 186
            SI +L+KL++L L  C +L S+P  ++S  L  L L  C +L++ P + S  L     L
Sbjct: 476 ESIGFLSKLKILRLIGCHNLHSVP-PLNSASLVELNLSHCHSLESFPLVVSGFLGELKIL 534

Query: 187 PLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEM 246
            ++G     L  S+  L ++ EL +  C  L++ S+ +F  + L+++    C  L+   +
Sbjct: 535 RVIGCSKIRLIQSL-VLPSLEELDLLDCTSLDSFSNMVFGDK-LKTMSFRGCYELR--SI 590

Query: 247 PSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDEL-GN 305
           P   +D          +L L  CP   S+   +    SL  L + +C   E  P  + G 
Sbjct: 591 PPLKLDSLE-------KLYLSYCPNLVSISPLK--LDSLEKLVLSNCYKLESFPSVVDGL 641

Query: 306 LQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
           L  L  L +     +R +P    +L  L KL+L +C  L  +S S  KL S+E + +SNC
Sbjct: 642 LDKLKTLFVKNCHNLRSIPA--LKLDSLEKLDLLHCHNL--VSISPLKLDSLEKLVLSNC 697

Query: 365 SNLKGFPEIPFCNIDG-------------SGIERIPS------SVLKLNKCSKLESLPSS 405
             L+ FP +    +DG               +  IP+        L L+ C KLES PS 
Sbjct: 698 YKLESFPSV----VDGLLNKLKTLFVKNCHNLRNIPALKLDSLEKLDLSDCYKLESFPSV 753

Query: 406 L---------------CMFK-----SLTSLEIID---CKKLERLPDELGNLEALEELRVE 442
           +                M +     SLTSLE  +   C +LE  P+ LG +  +  L ++
Sbjct: 754 VDGLLDKLKFLNIVNCIMLRNIPRLSLTSLEHFNLSCCYRLESFPEILGEMRNIPRLHLD 813

Query: 443 GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEI--------------- 487
            T I+E P     L   +  +     +  LP+R  V      L I               
Sbjct: 814 ETPIKEFPFQFQTLTQPQRFVSCDCGYGRLPNRDVVMSESAELTIKAEEKMNQMQSSHVK 873

Query: 488 IDCKNFMRLPDEIGNLEYL-----KVLTIKGTAIREVPESLGQLSSLEWLVLSD----NN 538
             C    +L DE  ++  +     K L I       +P+S+ +   L  +VL D      
Sbjct: 874 YICVRNCKLSDEYLSISLMLFANVKELHITNCQFTVIPKSIEKCQFLWKIVLDDCKELME 933

Query: 539 LQIIPESLNQLSSL 552
           ++ IP  L +LS+L
Sbjct: 934 MKGIPPCLRELSAL 947


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 161/321 (50%), Gaps = 26/321 (8%)

Query: 282 FKSLTSLEIIDC--PNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            + L +L+++D        LP E+G LQ L  L +    +   P+ +G+L  L  L L +
Sbjct: 89  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-S 147

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLK 392
            ++++ I   I KL+ ++S+ + N + L   P+       + +  +  + I+ +P  + K
Sbjct: 148 ANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEK 206

Query: 393 LNKC-------SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           L K        ++L +LP  +   + L SL + D  +L  LP E+G L+ L+ L +    
Sbjct: 207 LQKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQ 265

Query: 446 IREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKN--FMRLPDEIGN 502
           +  +P+ +  L  L  L L   +   ++P  +     L +L+++D  N     LP EIG 
Sbjct: 266 LTTIPQEIGHLQNLQDLYLV-SNQLTTIPKEI---GQLQNLQMLDLGNNQLTILPKEIGK 321

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
           L+ L+ L +    +  +P+ +GQL +L+ L LS+N L  IP+ + QL +L  L LSNN L
Sbjct: 322 LQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQL 381

Query: 563 ERIPERLDPLSSLKYLDLFEN 583
             IP+ +  L +L+ L L  N
Sbjct: 382 ITIPKEIGQLQNLQTLYLRNN 402



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 41/332 (12%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
            + LP ++G L+ L  L +    +  LP+ + QL  L  L+L+  ++L  +   I KL++
Sbjct: 59  LKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLR-SNQLTILPKEIGKLQN 117

Query: 356 VESIEISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           ++ + +SN + L  FP+       + + N+  + I+ IP  + KL K   L  LP++   
Sbjct: 118 LQELYLSN-NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL-YLPNN--- 172

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCS 467
                        +L  LP E+G L+ L+ L +    I+ +P+ + +L  L  L L K +
Sbjct: 173 -------------QLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHK-N 218

Query: 468 SFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLS 527
              +LP  +   + L SL + D      LP EIG L+ LKVL +    +  +P+ +G L 
Sbjct: 219 QLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ 277

Query: 528 SLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDR 587
           +L+ L L  N L  IP+ + QL +L  L L NN L  +P+ +  L +L+ L L  N L  
Sbjct: 278 NLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTT 337

Query: 588 IPEYLRSFP------------TSIPSEFTSLR 607
           IP+ +                T+IP E   L+
Sbjct: 338 IPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 369



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 41/279 (14%)

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    I+ +P+ + +L  L  L L N ++L  +   I KL+ ++ +
Sbjct: 132 PKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPN-NQLTTLPQEIGKLQKLQWL 190

Query: 360 EISNCSNLKGFPE-------IPFCNIDGSGIERIPSSVLKLNKC-------SKLESLPSS 405
            +S  + +K  P+       + +  +  + +  +P  + KL K        ++L +LP  
Sbjct: 191 YLS-YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQE 249

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKL- 463
           +   ++L  L  ++  +L  +P E+G+L+ L++L +    +  +PK + QL  L  L L 
Sbjct: 250 IGQLQNLKVL-FLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLG 308

Query: 464 --------KKCSSFESLPSRLYVSKS-LTSL--EIIDCKNFMRL----------PDEIGN 502
                   K+    ++L   LY+S + LT++  EI   +N   L          P EIG 
Sbjct: 309 NNQLTILPKEIGKLQNL-QELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQ 367

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQI 541
           L+ L+ L +    +  +P+ +GQL +L+ L L +N   I
Sbjct: 368 LQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 406



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 177/423 (41%), Gaps = 88/423 (20%)

Query: 45  ELRYFEWHQFPLKTL--NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLT 102
           ++R  +  +  LK L   I   +NL  L +  +++  L  +++ L +L+ +DL+ S  LT
Sbjct: 48  DVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLR-SNQLT 106

Query: 103 KLP-DLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLK 161
            LP ++   QNL+ L L   + LT     I  L KL+ L+L     + ++P  I      
Sbjct: 107 ILPKEIGKLQNLQELYLS-NNQLTTFPKEIGKLQKLQWLNLS-ANQIKTIPKEIEK---- 160

Query: 162 RLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS 221
                       L K+ S +L +        +  LP  I  L  + + L  S  +++ + 
Sbjct: 161 ------------LQKLQSLYLPNN------QLTTLPQEIGKLQKL-QWLYLSYNQIKTLP 201

Query: 222 SSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
             I KLQ L+ + +H+    Q   +P                 +++K  + ESL      
Sbjct: 202 QEIEKLQKLQWLYLHKN---QLTTLPQ----------------EIEKLQKLESLG----- 237

Query: 282 FKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCS 341
                    +D      LP E+G LQ L  L ++   +  +P+ +G L  L  L L   +
Sbjct: 238 ---------LDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLV-SN 287

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC----- 396
           +L  I   I +L++++ +++ N                 + +  +P  + KL        
Sbjct: 288 QLTTIPKEIGQLQNLQMLDLGN-----------------NQLTILPKEIGKLQNLQELYL 330

Query: 397 --SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLA 454
             ++L ++P  +   ++L  L  +   +L  +P E+G L+ L+EL +    +  +PK + 
Sbjct: 331 SNNQLTTIPKEIGQLQNLQEL-YLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIG 389

Query: 455 QLA 457
           QL 
Sbjct: 390 QLQ 392


>gi|298205194|emb|CBI17253.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 149/330 (45%), Gaps = 78/330 (23%)

Query: 306 LQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCS 365
           ++AL  L  D +AI+ELP                 S +EY+         +E +++  CS
Sbjct: 1   MEALTYLHFDRSAIKELP-----------------SAIEYL---------LEDLQLFVCS 34

Query: 366 NLKGFPEI-----PFCNIDGSGIERIPSSVLKLN-------KCSKLESLPSSLCMFKSLT 413
           NL  FPEI      F ++  +GI+ +PSS+  LN        C  L SL SS+  FKS  
Sbjct: 35  NLDAFPEIMEDMKEFLDLR-TGIKELPSSMEHLNINSLFLSDCKNLRSLLSSIRRFKSFC 93

Query: 414 SLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLP 473
            L +  C  L   P+ +  ++ LE L +EGT I+E+P S+  L                 
Sbjct: 94  RLFLNGCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNL----------------- 136

Query: 474 SRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA-IREVPESLGQLSSLEWL 532
                 KSL  L + +CKN + +PD I +L  LK L + G + + + P++L  L +L  L
Sbjct: 137 ------KSLQMLYLSNCKNLVTIPDSINDLRCLKRLILPGCSNLEKFPKNLEGLCTLVEL 190

Query: 533 VLSDNNLQ--IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIP 589
            LS  NL    IP  +  L SL +L LS N++  IP  +  L  L+ LD+     L  IP
Sbjct: 191 DLSHCNLMEGSIPTDIWGLYSLCTLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIP 250

Query: 590 EYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
           E   S P             +D   C KL+
Sbjct: 251 ELSSSLP------------QIDAHGCTKLE 268



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 48/294 (16%)

Query: 56  LKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
           ++ L  LH++     ++P S +  L +D+Q  V            L   P++ +    E 
Sbjct: 1   MEALTYLHFDRSAIKELP-SAIEYLLEDLQLFVCSN---------LDAFPEI-MEDMKEF 49

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           LDL   + + E  SS+++LN +  L L  CK+L SL +SI   K   RL L GCS+L+N 
Sbjct: 50  LDLR--TGIKELPSSMEHLN-INSLFLSDCKNLRSLLSSIRRFKSFCRLFLNGCSSLRNF 106

Query: 175 PK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           P+ M        L L G  I+ELPSSI+ L ++  L + +CK L  I  SI  L+ L+ +
Sbjct: 107 PEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLKRL 166

Query: 234 RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDC 293
            +  C NL+                             P++L  G C   +L  L++  C
Sbjct: 167 ILPGCSNLEKF---------------------------PKNL-EGLC---TLVELDLSHC 195

Query: 294 PNFE-RLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYI 346
              E  +P ++  L +L  L + G  +  +P G+ QL  L  L++ +C  L+ I
Sbjct: 196 NLMEGSIPTDIWGLYSLCTLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEI 249



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 65/308 (21%)

Query: 192 GIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNI 251
            I+ELPS+I+ L  + +L ++ C  L+         + +E ++       +FL++     
Sbjct: 13  AIKELPSAIEYL--LEDLQLFVCSNLDAFP------EIMEDMK-------EFLDL----- 52

Query: 252 DGTRSKEQPSS-------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
             T  KE PSS        L L  C    SL S    FKS   L +  C +    P+ + 
Sbjct: 53  -RTGIKELPSSMEHLNINSLFLSDCKNLRSLLSSIRRFKSFCRLFLNGCSSLRNFPEIME 111

Query: 305 NLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNC 364
            ++ L  L ++GTAI+ELP  +  L  L  L L NC  L  I  SI  L+ ++ + +  C
Sbjct: 112 GMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLKRLILPGC 171

Query: 365 SNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLE 424
           SNL+ FP+    N++G                         LC   +L  L++  C  +E
Sbjct: 172 SNLEKFPK----NLEG-------------------------LC---TLVELDLSHCNLME 199

Query: 425 -RLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSL 482
             +P ++  L +L  L + G  +  +P  + QL  L  L +  C   + +P    +S SL
Sbjct: 200 GSIPTDIWGLYSLCTLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPE---LSSSL 256

Query: 483 TSLEIIDC 490
             ++   C
Sbjct: 257 PQIDAHGC 264


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 30/310 (9%)

Query: 296 FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKS 355
           F+ LP E+G L+ L  L ++   +  LP+ +GQL  L KL L + ++   +   + KL++
Sbjct: 58  FKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYD-NQFTILPKEVEKLEN 116

Query: 356 VESI------------EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKC------- 396
           ++ +            EI    NL+         +  +  + IP  + +L          
Sbjct: 117 LKELYLGSNQLTTLPNEIGQLKNLR------VLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 397 SKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL 456
           ++L +LP+ +   K+L SL  +   +L  LP+E+G L+ L+ L +    +  +P  + QL
Sbjct: 171 NQLTALPNEIGQLKNLQSL-YLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQL 229

Query: 457 A-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTA 515
             L  L L   +    LP+ +   K+L +L  +    F  LP EIG L+ L+ L +    
Sbjct: 230 QNLQSLYLG-SNQLTILPNEIGQLKNLQTL-YLRYNQFTTLPKEIGKLQNLQRLELNYNQ 287

Query: 516 IREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSL 575
           ++ +P+ +GQL +L+WL L  N   I+PE + +L +L  L L +N L  IPE +  L +L
Sbjct: 288 LKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQNL 347

Query: 576 KYLDLFENNL 585
           + L L +N L
Sbjct: 348 QELYLRDNQL 357



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 17/213 (7%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
           +   + + LP E+G L+ L+EL +    +  +PK + QL  L KL L   + F  LP  +
Sbjct: 53  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYD-NQFTILPKEV 111

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              ++L  L  +       LP+EIG L+ L+VL +     + +P+ +GQL +L+ L L  
Sbjct: 112 EKLENLKEL-YLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP 596
           N L  +P  + QL +L SL L +N L  +P  +  L +L+ L L  N L           
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRL----------- 219

Query: 597 TSIPSEFTSLRLSVDL---RNCLKLDPNELSEI 626
           T++P+E   L+    L    N L + PNE+ ++
Sbjct: 220 TTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQL 252



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 11/223 (4%)

Query: 376 CNIDGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDCKKLERLPD 428
            N++ + +  +P  + +L    KL         LP  +   ++L  L  +   +L  LP+
Sbjct: 74  LNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKEL-YLGSNQLTTLPN 132

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
           E+G L+ L  L +     + +PK + QL  L  L L   +   +LP+ +   K+L SL  
Sbjct: 133 EIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLG-YNQLTALPNEIGQLKNLQSL-Y 190

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
           +       LP+EIG L+ L+ L +    +  +P  +GQL +L+ L L  N L I+P  + 
Sbjct: 191 LGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIG 250

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           QL +L +L L  N    +P+ +  L +L+ L+L  N L  +P+
Sbjct: 251 QLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPK 293



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 39/290 (13%)

Query: 52  HQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQ 111
           +QF +    +   ENL  L +  +++T L +++  L +L+ ++L +++  T   ++   +
Sbjct: 102 NQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLK 161

Query: 112 NLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNL 171
           NL+ L+LGY + LT   + I  L  L+ L L     LT+LP  I               L
Sbjct: 162 NLQTLNLGY-NQLTALPNEIGQLKNLQSLYLG-SNQLTALPNEI-------------GQL 206

Query: 172 KNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLE 231
           +NL  +     R T          LP+ I  L N+  L + S  +L  + + I +L+ L+
Sbjct: 207 QNLQSLYLSTNRLT---------TLPNEIGQLQNLQSLYLGS-NQLTILPNEIGQLKNLQ 256

Query: 232 SIRIHRCPNLQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLE 289
           ++ +      QF  +P     +   +  E   ++LK        +LP G    ++L  L+
Sbjct: 257 TLYLRYN---QFTTLPKEIGKLQNLQRLELNYNQLK--------TLPKGIGQLQNLQWLD 305

Query: 290 IIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
            +    F  LP+E+G L+ L  L +    +  +PE +GQL  L +L L++
Sbjct: 306 -LGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRD 354



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 18/160 (11%)

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQ 540
           S T ++  +   +  L   I N   ++VL +     + +P+ +G+L +L+ L L+ N L 
Sbjct: 23  SFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLT 82

Query: 541 IIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIP 600
           I+P+ + QL +L  L L +N    +P+ ++ L +LK L L  N L           T++P
Sbjct: 83  ILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQL-----------TTLP 131

Query: 601 SEFTSLRLSVDLRNCLKLDPNELSEIIKD-GWMK--QSVN 637
           +E   L+   +LR  L+L  N+   I K+ G +K  Q++N
Sbjct: 132 NEIGQLK---NLR-VLELTHNQFKTIPKEIGQLKNLQTLN 167



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 13/166 (7%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +LP+     ++L SL  +       LP+E+G LQ L  L +    +  LP  +GQL  L 
Sbjct: 198 ALPNEIGQLQNLQSL-YLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQ 256

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L L+  ++   +   I KL++++ +E+ N + LK  P+         GI ++ +     
Sbjct: 257 TLYLR-YNQFTTLPKEIGKLQNLQRLEL-NYNQLKTLPK---------GIGQLQNLQWLD 305

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              ++   LP  +   K+L  L + D  +L  +P+E+G L+ L+EL
Sbjct: 306 LGYNQFTILPEEIGKLKNLQELYLRD-NQLTTIPEEIGQLQNLQEL 350


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 273/582 (46%), Gaps = 45/582 (7%)

Query: 67  LVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTE 126
           L +L +  +++  L  ++  L ++K++    +KL    P L     L++L +   +S+  
Sbjct: 166 LTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQVLCIS-GNSMKT 224

Query: 127 THSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTS--CHLR 183
              S   L  L VL+LD    +++LP ++     L +L L G + +K+LPK      +LR
Sbjct: 225 LPDSTASLKNLHVLNLD-GNQISALPKAVFRLSQLVKLCLSG-NQIKSLPKEIGDLKNLR 282

Query: 184 STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHR------ 237
             L L    +  LP  +  L+++ EL +   K L  IS  +  L+ L+ + I        
Sbjct: 283 E-LSLSSNQLTFLPVQLYNLTSLEELTLDDNK-LTAISDKLQNLKQLKVLSIANNLLTDI 340

Query: 238 ------CPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP--ESLPSGQCMFKSLTSLE 289
                 CP ++ L++    +    +K      LK     R   E LP        L +L 
Sbjct: 341 TEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPD---QLAHLNNLS 397

Query: 290 IIDCPNFERL--PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYIS 347
           +I C N   L  P EL N   + +L + G  + E+P+ L  +  L  L L N +E+  I+
Sbjct: 398 VIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNL-NQNEIHEIA 456

Query: 348 SSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLC 407
           +SI   + +E +E+S  + L  F  + FC     G+  +  + L L++ +++ S+PS++ 
Sbjct: 457 NSIIHNRKLEHLELSG-NKLTVF-SVHFC-----GLHNL--AYLDLSR-NEINSVPSAIS 506

Query: 408 MFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCS 467
             +SL+   ++   K  R P EL  L++L+++ + G  I  VP  ++ L   +      +
Sbjct: 507 NLESLSE-LLLHSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNN 565

Query: 468 SFESLPSRLYVSKSLTSLEII--DCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
           SF+  P  L+   SL +L+I   D +  + LPDE+  L+ LK L I    I+ +P S+G+
Sbjct: 566 SFKVFPRELFSVSSLETLKISQKDGRKLISLPDELSKLKNLKELEISDNNIKTLPGSIGE 625

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
           + +L  L  + N L  +P S++ L++L  L L  N L  +P  +  L  L+ ++L  N +
Sbjct: 626 MKNLVQLTATSNQLYHLPASISSLAALQQLSLKGNQLTSLPSDISGLQKLREINLDSNPM 685

Query: 586 DRIPEYL----RSFPTSIPSEFTSLRLSVDLRNCLKLDPNEL 623
            R P  L    R +P     +   LR    L+   KL  N +
Sbjct: 686 LRPPSLLCDGKRLYPIGRYLQSADLRDEKILQKTFKLISNNI 727



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 38/327 (11%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           SLP   C    LT+L + +      LP E+  L+ + +L  +   + +LP  LG L  L 
Sbjct: 155 SLPPEICSLSQLTALNV-NHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQ 213

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKL 393
            L +   S ++ +  S   LK++  +                 N+DG+ I  +P +V +L
Sbjct: 214 VLCISGNS-MKTLPDSTASLKNLHVL-----------------NLDGNQISALPKAVFRL 255

Query: 394 NKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGI 446
           ++  KL       +SLP  +   K+L  L +    +L  LP +L NL +LEEL ++   +
Sbjct: 256 SQLVKLCLSGNQIKSLPKEIGDLKNLRELSL-SSNQLTFLPVQLYNLTSLEELTLDDNKL 314

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC-----KNFMRLPDEIG 501
             +   L  L     +LK  S   +L +   +++ +     I+C         RLP +I 
Sbjct: 315 TAISDKLQNLK----QLKVLSIANNLLTD--ITEKVCWCPAIECLKLNGNQMYRLPTKIH 368

Query: 502 NLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNN 561
           NL  LK L I+  A+  +P+ L  L++L  +V ++NNL  IP  L   + +  L LS N 
Sbjct: 369 NLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNK 428

Query: 562 LERIPERLDPLSSLKYLDLFENNLDRI 588
           L  +P+ L  ++SL YL+L +N +  I
Sbjct: 429 LSEVPQALSSMTSLLYLNLNQNEIHEI 455



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 20/225 (8%)

Query: 369 GFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPD 428
           G   I   N++   +  IP  V +   C+ L+ L              ++    +  LP 
Sbjct: 93  GTGSITSINLNSKELTEIPPDVFR---CTNLQCL--------------LLSNNFMTHLPT 135

Query: 429 ELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
            L +L  LE L +EG  +  +P  +  L+ L+ L +   +    LP  +   K++  L  
Sbjct: 136 SLCHLSKLEILSLEGNALVSLPPEICSLSQLTALNVNH-NQIAVLPHEISGLKNIKQL-F 193

Query: 488 IDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLN 547
            +     +LP  +G+L  L+VL I G +++ +P+S   L +L  L L  N +  +P+++ 
Sbjct: 194 ANNNKLSQLPPCLGDLTTLQVLCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAVF 253

Query: 548 QLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
           +LS LV L LS N ++ +P+ +  L +L+ L L  N L  +P  L
Sbjct: 254 RLSQLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQLTFLPVQL 298



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 207/496 (41%), Gaps = 83/496 (16%)

Query: 22  RLLKFCGSKNKCMVHSLEGVPFTELRYFEW--HQFPLKTLNILHWENLVSLKMPGSKVTQ 79
           +L+K C S N+      E      LR      +Q     + + +  +L  L +  +K+T 
Sbjct: 257 QLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTA 316

Query: 80  LWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEV 139
           + D +QNL  LK + +  + L      +     +E L L   + +    + I  L  L+ 
Sbjct: 317 ISDKLQNLKQLKVLSIANNLLTDITEKVCWCPAIECLKLN-GNQMYRLPTKIHNLRNLKE 375

Query: 140 LDLDRCKSLTSLPTSIHSKYLKRLVLRGCS--NLKNLP-KMTSCHLRSTLPLLGVGIEEL 196
           L ++R  +L  LP  +   +L  L +  C+  NL  +P ++ +C+  + L L G  + E+
Sbjct: 376 LHIER-NALEMLPDQL--AHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEV 432

Query: 197 PSSIKCLSNIGELLIYSCKR--LENISSSIF---KLQFLE-------SIRIHRCP--NLQ 242
           P   + LS++  LL  +  +  +  I++SI    KL+ LE          +H C   NL 
Sbjct: 433 P---QALSSMTSLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLA 489

Query: 243 FLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDE 302
           +L++    I+                     S+PS         S  ++    F R P E
Sbjct: 490 YLDLSRNEIN---------------------SVPSA-ISNLESLSELLLHSNKFRRFPIE 527

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L  L++L ++ + G  I  +P G+  L  L  + L N S  +     +F + S+E+++IS
Sbjct: 528 LCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNS-FKVFPRELFSVSSLETLKIS 586

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
                           DG                 KL SLP  L   K+L  LEI D   
Sbjct: 587 QK--------------DG----------------RKLISLPDELSKLKNLKELEISD-NN 615

Query: 423 LERLPDELGNLEALEELRVEGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKS 481
           ++ LP  +G ++ L +L      +  +P S++ L AL +L LK  +   SLPS +   + 
Sbjct: 616 IKTLPGSIGEMKNLVQLTATSNQLYHLPASISSLAALQQLSLKG-NQLTSLPSDISGLQK 674

Query: 482 LTSLEIIDCKNFMRLP 497
           L  +  +D    +R P
Sbjct: 675 LREIN-LDSNPMLRPP 689


>gi|421123435|ref|ZP_15583715.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343486|gb|EKO94717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 1618

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 39/268 (14%)

Query: 326  LGQLALLSKLELKNCS--ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
            L +L  L K+EL+N +  +L  +SS    L+ VE ++I      +GF      + D SG+
Sbjct: 1170 LSELKNLKKIELQNWNLKDLNVLSSCT-NLEKVELVDI------QGFE----TDFDCSGL 1218

Query: 384  ERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                 + + LN   +K E  P S+  F++LTSL + DCK L  +P+ +GNL+ L  L ++
Sbjct: 1219 LNESKATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLINLYLD 1277

Query: 443  GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
               +  +P SL  L                       + LT L I D   F  +PD + +
Sbjct: 1278 KNQLTTLPASLGTL-----------------------EQLTQLHI-DSNPFTTIPDAVLS 1313

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
            L+ LK L  +   I  +P  +G L+SLE L L DN L  +P ++  LSSL  + LS N  
Sbjct: 1314 LKNLKTLLARWNQISALPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKF 1373

Query: 563  ERIPERLDPLSSLKYLDLFENNLDRIPE 590
               PE +  L +LK+LD+ EN + ++PE
Sbjct: 1374 SEFPEPILYLKNLKHLDVGENKIRQLPE 1401



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 144/362 (39%), Gaps = 75/362 (20%)

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            QNL  L L  C  L+E   SI  L +L  L LD+ + LT+LP S                
Sbjct: 1246 QNLTSLSLRDCK-LSEVPESIGNLKRLINLYLDKNQ-LTTLPAS---------------- 1287

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
            L  L ++T  H+ S  P   +     P ++  L N+  LL     ++  + + I  L  L
Sbjct: 1288 LGTLEQLTQLHIDSN-PFTTI-----PDAVLSLKNLKTLLA-RWNQISALPNEIGNLTSL 1340

Query: 231  ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
            E + +H               D   S                 SLP+      SLT + +
Sbjct: 1341 EDLNLH---------------DNQLS-----------------SLPTTIQNLSSLTKIGL 1368

Query: 291  IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
                 F   P+ +  L+ L  L +    IR+LPE +G L+ L  L++K  + +E +  SI
Sbjct: 1369 -SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKE-TWIESLPQSI 1426

Query: 351  FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
              L  +E+I +        F ++P    +   +++I     + N+ +K        C F+
Sbjct: 1427 QNLTQLETIYLPKAK----FRDLPDFLANMESLKKIKFESEEYNQLTK-------WCEFE 1475

Query: 411  SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
                ++++   K     D++ NL        +G    ++ +   +L +S+   +K  +F 
Sbjct: 1476 YSKYIKLLHGGKYPEARDKITNL-----FTTKGEDFLKLNQWEVKLKISESYYRKAEAFA 1530

Query: 471  SL 472
            ++
Sbjct: 1531 TV 1532


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 169/332 (50%), Gaps = 26/332 (7%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPN--FERLPDELGNLQALNRLIIDGTAI 319
           +E KLK  P+      GQ     L +L++++  N     LP E+G LQ L  L + G  +
Sbjct: 54  NEQKLKTLPKE----IGQ-----LQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQL 104

Query: 320 RELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNID 379
              P+ +GQL  L  L L + + L  +   I +LK++  + + N +    FP+       
Sbjct: 105 TTFPKEIGQLKNLQTLVL-SKNRLTTLPKEIGQLKNLRELYL-NTNQFTAFPK------- 155

Query: 380 GSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEE 438
              I ++  ++ +LN   ++L++LP+ +   ++L  L +    +L+ L  E+G L+ L+ 
Sbjct: 156 --EIGQL-KNLQQLNLYANQLKTLPNEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQV 211

Query: 439 LRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
           L +    ++ +PK + QL   ++     + F+++P  +   K+L  L++     F  +P+
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDL-GYNQFKTVPE 270

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
           EIG L+ L++L +     + VPE  GQL +L+ L L+ N L  +P  + QL +L  L LS
Sbjct: 271 EIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS 330

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
            N L+ +   +  L +LK L L +N L  +P+
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPK 362



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 147/287 (51%), Gaps = 19/287 (6%)

Query: 312 LIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFP 371
           L ++   ++ LP+ +GQL  L  LEL N ++L  +   I +L++++ + +S  + L  FP
Sbjct: 51  LDLNEQKLKTLPKEIGQLQNLQVLELNN-NQLATLPKEIGQLQNLQELHLS-GNQLTTFP 108

Query: 372 EIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELG 431
           +      +   ++ + + VL  N+ +   +LP  +   K+L  L  ++  +    P E+G
Sbjct: 109 K------EIGQLKNLQTLVLSKNRLT---TLPKEIGQLKNLREL-YLNTNQFTAFPKEIG 158

Query: 432 NLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC 490
            L+ L++L +    ++ +P  + QL  L +L L    S+  L +       L +L+++D 
Sbjct: 159 QLKNLQQLNLYANQLKTLPNEIGQLQNLRELHL----SYNQLKTLSAEIGQLQNLQVLDL 214

Query: 491 KN--FMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
            +     LP EIG L+ L++L +     + VPE +GQL +L+ L L  N  + +PE + Q
Sbjct: 215 NDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQ 274

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSF 595
           L +L  L L+NN  + +PE    L +L+ L L  N L  +P  +R  
Sbjct: 275 LKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 156/316 (49%), Gaps = 20/316 (6%)

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
           I +  NLQ LE+ +  +  T  KE    Q   EL L    +  + P      K+L +L +
Sbjct: 65  IGQLQNLQVLELNNNQL-ATLPKEIGQLQNLQELHLS-GNQLTTFPKEIGQLKNLQTL-V 121

Query: 291 IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
           +       LP E+G L+ L  L ++       P+ +GQL  L +L L   ++L+ + + I
Sbjct: 122 LSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLY-ANQLKTLPNEI 180

Query: 351 FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
            +L+++  + +S       + ++   + +   ++ +   VL LN  ++L++LP  +   K
Sbjct: 181 GQLQNLRELHLS-------YNQLKTLSAEIGQLQNL--QVLDLND-NQLKTLPKEIGQLK 230

Query: 411 SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
           +L  L++ +  + + +P+E+G L+ L+ L +     + VP+ + QL   ++     + F+
Sbjct: 231 NLQMLDL-NNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFK 289

Query: 471 SLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLE 530
           ++P      K+L  L + +      LP+EI  L+ L+ L +    ++ +   +GQL +L+
Sbjct: 290 TVPEETGQLKNLQMLSL-NANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLK 348

Query: 531 WLVLSDNNLQIIPESL 546
            L L DN L+ +P+ +
Sbjct: 349 KLSLRDNQLKTLPKEI 364



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 165/395 (41%), Gaps = 100/395 (25%)

Query: 78  TQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDL------------GYCSSLT 125
           T L   ++N + ++ +DL   KL T   ++   QNL++L+L            G   +L 
Sbjct: 36  TDLTKALKNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95

Query: 126 ETHSS----------IQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
           E H S          I  L  L+ L L + + LT+LP  I   K L+ L L   +     
Sbjct: 96  ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNR-LTTLPKEIGQLKNLRELYL-NTNQFTAF 153

Query: 175 PK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI 233
           PK +        L L    ++ LP+ I  L N+ EL + S  +L+ +S+ I +LQ L+ +
Sbjct: 154 PKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHL-SYNQLKTLSAEIGQLQNLQVL 212

Query: 234 ------------RIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCM 281
                        I +  NLQ L++ +                       PE +  GQ  
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTV-----------------PEEI--GQ-- 251

Query: 282 FKSLTSLEIIDCP--NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
              L +L+++D     F+ +P+E+G L+ L  L ++    + +PE  GQL  L  L L N
Sbjct: 252 ---LKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSL-N 307

Query: 340 CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
            ++L  + + I +LK++  + +S                                  ++L
Sbjct: 308 ANQLTTLPNEIRQLKNLRELHLS---------------------------------YNQL 334

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLE 434
           ++L + +   K+L  L + D  +L+ LP E+G L+
Sbjct: 335 KTLSAEIGQLKNLKKLSLRD-NQLKTLPKEIGQLQ 368


>gi|357485385|ref|XP_003612980.1| NBS resistance protein [Medicago truncatula]
 gi|355514315|gb|AES95938.1| NBS resistance protein [Medicago truncatula]
          Length = 996

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 120/221 (54%), Gaps = 14/221 (6%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKN-KCMVHSLEGVPFTELRYFEWHQFPLKTL-NILHW 64
           +++++P  F KMT L+ L F        +   L+  P T+LRY  W  +PLK+       
Sbjct: 705 KLKLSPPVFDKMTNLKFLYFHDIDGLDRLPQGLQFFP-TDLRYLYWMHYPLKSFPEKFSV 763

Query: 65  ENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSL 124
           +NLV L +P S V +LW  VQ+LV+LK++ L +SK L +LPD S A NL++L++ +C+ L
Sbjct: 764 DNLVILGLPYSLVEKLWCGVQDLVNLKQVTLCHSKYLKELPDFSNATNLKVLNMRWCNRL 823

Query: 125 TE-------THSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKM 177
            +       T +   +L  L+ L+L  CK+L+    ++ +  +  L L  CS +K LP  
Sbjct: 824 IDNFCFSLATFTRNSHLTSLKYLNLGFCKNLSKFSVTLEN--IVELDLSCCS-IKALPSS 880

Query: 178 TSCHLR-STLPLLGVGIEELPSSIKCLSNIGELLIYSCKRL 217
             C  +   L LLG  IE +PSSI  L+    L I  C +L
Sbjct: 881 FGCQSKLEVLVLLGTKIESIPSSIINLTRRRVLDIQFCSKL 921


>gi|15223549|ref|NP_176043.1| white rust resistance 4 protein [Arabidopsis thaliana]
 gi|12323031|gb|AAG51508.1|AC058785_11 disease resistance protein [Arabidopsis thaliana]
 gi|48310570|gb|AAT41840.1| At1g56510 [Arabidopsis thaliana]
 gi|110741855|dbj|BAE98869.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195280|gb|AEE33401.1| white rust resistance 4 protein [Arabidopsis thaliana]
          Length = 1007

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 157/342 (45%), Gaps = 25/342 (7%)

Query: 7   EIQINPYTFSKMTELRLLKFCGSKNKCMVHSL---EGVPFTE-LRYFEWHQFPLKTL-NI 61
           E+ I+P  F KM  L  LK   +        L   E + F   +R F W  +  K L + 
Sbjct: 538 ELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWDAYSGKRLPSS 597

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
              ENLV + M  S++ +LW+  Q L +LK+IDL  S  LT+LPDLS A NLE L +G C
Sbjct: 598 FFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDLYVGSC 657

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCH 181
           ++L E  SSI  L+KL  + +  C+SL  +P+ I+   L  L +  CS L+  P + +  
Sbjct: 658 TALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSRLRRFPDIPTS- 716

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
               + + G  +EELP+S+   S +  + I     L+     IF  +   S+      N 
Sbjct: 717 -IEDVQVTGTTLEELPASLTHCSGLQTIKISGSVNLK-----IFYTELPVSVSHINISNS 770

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
               +    I G  +      +L L  C R  SLP    + +SL  L+  DC + E L  
Sbjct: 771 GIEWITEDCIKGLHNLH----DLCLSGCKRLVSLPE---LPRSLKILQADDCDSLESLNG 823

Query: 302 EL----GNLQALNRLIIDGTAIRELPEG--LGQLALLSKLEL 337
            L      L   N   +D  A R + +   +   ALL  LE+
Sbjct: 824 HLNTPNAELYFANCFKLDAEARRAIIQQSFVSGWALLPGLEV 865



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 49/344 (14%)

Query: 370 FPE-IPFCNIDGSGIERIPSSVLKLN------KCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           FP  I   + D    +R+PSS    N      + S+L+ L        +L  +++     
Sbjct: 577 FPRTIRLFHWDAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSC 636

Query: 423 LERLPDELGNLEALEELRVEG-TGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSK 480
           L  LPD L N   LE+L V   T + E+P S+  L  L+ + +  C S E +PS + ++ 
Sbjct: 637 LTELPD-LSNATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLT- 694

Query: 481 SLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDN-NL 539
           SLT L +  C    R PD   ++E ++V    GT + E+P SL   S L+ + +S + NL
Sbjct: 695 SLTFLNMNKCSRLRRFPDIPTSIEDVQV---TGTTLEELPASLTHCSGLQTIKISGSVNL 751

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYL-DLFENNLDRI---PEYLRSF 595
           +I    L    S+  + +SN+ +E I E  D +  L  L DL  +   R+   PE  RS 
Sbjct: 752 KIFYTELP--VSVSHINISNSGIEWITE--DCIKGLHNLHDLCLSGCKRLVSLPELPRSL 807

Query: 596 PT----------SIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKS 645
                       S+     +    +   NC KLD      II+          +++++  
Sbjct: 808 KILQADDCDSLESLNGHLNTPNAELYFANCFKLDAEARRAIIQ----------QSFVSGW 857

Query: 646 MYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKLMGFAFCVVVA 689
              PG E+P  F H++ G+  SL  P    Y+    F  CVV++
Sbjct: 858 ALLPGLEVPPEFGHRARGN--SLIIP----YSASNRFKVCVVMS 895



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 36/250 (14%)

Query: 252 DGTRSKEQPSS-------ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG 304
           D    K  PSS       E+ ++     +     QC+  +L  +++        LPD L 
Sbjct: 587 DAYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCL-ANLKKIDLSRSSCLTELPD-LS 644

Query: 305 NLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISN 363
           N   L  L +   TA+ ELP  +G L  L+ + + +C  LE I S I  L S+  + ++ 
Sbjct: 645 NATNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLI-NLTSLTFLNMNK 703

Query: 364 CSNLKGFPEIPF----CNIDGSGIERIPSSVLKLNKCSKLESLPSS----LCMFKSLTSL 415
           CS L+ FP+IP       + G+ +E +P+S   L  CS L+++  S    L +F +   +
Sbjct: 704 CSRLRRFPDIPTSIEDVQVTGTTLEELPAS---LTHCSGLQTIKISGSVNLKIFYTELPV 760

Query: 416 EI----IDCKKLERLPDE-LGNLEALEELRVEG----TGIREVPKSLAQLALSKLKLKKC 466
            +    I    +E + ++ +  L  L +L + G      + E+P+S     L  L+   C
Sbjct: 761 SVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRS-----LKILQADDC 815

Query: 467 SSFESLPSRL 476
            S ESL   L
Sbjct: 816 DSLESLNGHL 825


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 246/560 (43%), Gaps = 88/560 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +    N QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQ---NNQFTILPK 203

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +      LP E+G L
Sbjct: 204 EIGQLQNLQTLNLQDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVLPKEIGQL 254

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L  +   I +L++++ +E+  N  
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVN-NRLTVLPKEIGQLQNLQDLELLMNPL 313

Query: 366 NLKGFPEI----PFCNID-----GSGIER-------------------------IPSSVL 391
           +LK    I    P  N+D       G+ R                          P  +L
Sbjct: 314 SLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVIL 373

Query: 392 KLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           K     +L        +LP  +   K+L  L  +    L+++P E+G L  LE L +E  
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYL-ALGLNGLKKIPSEIGQLRNLEALNLEAN 432

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +PK + QL  L +L L + ++ +  P+ +   K L  L++     F   P EIG L
Sbjct: 433 ELERLPKEIGQLRNLQRLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKL 490

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           E L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L 
Sbjct: 491 ENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT 550

Query: 564 RIPERLDPLSSLKYLDLFEN 583
            +P  +  L +L++L L  N
Sbjct: 551 TLPTEIGQLQNLQWLYLQNN 570



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 222/519 (42%), Gaps = 121/519 (23%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 86  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ +   F  L
Sbjct: 145 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQNN-QFTIL 201

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L  +   I +L++++ +
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN-NRLTVLPKEIGQLQNLQML 260

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   K+L +L +++
Sbjct: 261 ----CS-----PE------------------------NRLTALPKEMGQLKNLQTLNLVN 287

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPK-------SL 453
             +L  LP E+G L+ L++L             R++         +REV +       +L
Sbjct: 288 -NRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNL 346

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC------------KNFM---- 494
           AQ   L +  L+L+  +  +  P  +   ++L  L + DC            KN      
Sbjct: 347 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 495 ------RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                 ++P EIG L  L+ L ++   +  +P+ +GQL +L+ L L  N L+I P  + Q
Sbjct: 407 GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQ 466

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFP--------- 596
           L  L  L LS N     P+ +  L +L+ L+L  N L  +P   E L++           
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQF 526

Query: 597 TSIPSEFTSLR--LSVDLRNC-LKLDPNELSEIIKDGWM 632
           T +P E   L+   ++DLRN  L   P E+ ++    W+
Sbjct: 527 TVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 3/173 (1%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
           +  +KL  LP E+G L+ L+EL ++   +  +PK + QL  L +L L+  +   + P+ +
Sbjct: 55  LSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRD-NQLATFPAVI 113

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              + L SL++ + +  + LP+EIG L+ L+ L +    +   P+ +GQL +L+ L LS+
Sbjct: 114 VELQKLESLDLSENR-LIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           N L  +P+ + QL +L +L L NN    +P+ +  L +L+ L+L +N L  +P
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLP 225



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 206/492 (41%), Gaps = 123/492 (25%)

Query: 52  HQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLA 110
           +QF +    I   +NL +L +  +++  L  ++  L +L+ + L+ ++L T LP ++   
Sbjct: 196 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRL-TVLPKEIGQL 254

Query: 111 QNLEILDLGYCS---SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
           QNL++L    CS    LT     +  L  L+ L+L   + LT LP  I            
Sbjct: 255 QNLQML----CSPENRLTALPKEMGQLKNLQTLNLVNNR-LTVLPKEIGQ---------- 299

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
             NL++L  + +                 P S+K    I +L   S   L  ++      
Sbjct: 300 LQNLQDLELLMN-----------------PLSLKERKRIQKLFPDSNLDLREVAED---- 338

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSL 285
                  ++R  NL              ++E+P    +L+L+     +  P     F++L
Sbjct: 339 ------GVYRNLNL--------------AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNL 378

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             L + DC  F  LP E+  L+ L  L +    ++++P  +GQL  L  L L+  +ELE 
Sbjct: 379 RELYLYDC-GFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE-ANELER 436

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           +   I +L++++ + +   + LK FP         + IE++           KL+ L  S
Sbjct: 437 LPKEIGQLRNLQRLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLS 476

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
           +  F +               P E+G LE L+ L ++   +  +P  + QL         
Sbjct: 477 VNQFTT--------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL--------- 513

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
                         K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQ
Sbjct: 514 --------------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQ 558

Query: 526 LSSLEWLVLSDN 537
           L +L+WL L +N
Sbjct: 559 LQNLQWLYLQNN 570


>gi|297805928|ref|XP_002870848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316684|gb|EFH47107.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 159/316 (50%), Gaps = 37/316 (11%)

Query: 1   MSKINSEIQINPYTFSKMTELRLLKFCG-----SKNKCMVHSLEGVPFTELRYFEWHQFP 55
           +  ++ ++ I+   F  M+  + L+F G     +    +   L  +P  +LR  EW +FP
Sbjct: 598 VENLSGQLNISERGFEGMSNHKFLRFHGPYEGENDKLYLPQGLNNLP-RKLRIIEWFRFP 656

Query: 56  LKTL-NILHWENLVSLKMPGSKVTQLWD--------DVQNLVSLKRIDLKYSKLLTKLPD 106
           +K L +    + LV L M  SK+  +W         D+  L +LKR+DL+ SK L +LPD
Sbjct: 657 MKCLPSNFCTKYLVQLHMWNSKLQNMWQGNQESRRSDLPPLGNLKRMDLRESKHLKELPD 716

Query: 107 LSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLR 166
           LS A NLE L L  CSSL E  SSI  L KL+VL L  C  L +LPT+I+ + L  L L 
Sbjct: 717 LSTATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKLEALPTNINLESLDYLDLA 776

Query: 167 GCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS--- 223
            C  +K+ P++++   R  L L+   ++E+PS+IK  S + +L +     L+    +   
Sbjct: 777 DCLLIKSFPEISTNIKR--LNLMKTAVKEVPSTIKSWSPLRKLEMSYNDNLKEFPHALDI 834

Query: 224 IFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFK 283
           I KL F ++         +  E+P      +R +      L L+ C R  ++P    +  
Sbjct: 835 ITKLYFNDT---------KIQEIPLWVQKISRLQ-----TLVLEGCKRLVTIPQ---LSD 877

Query: 284 SLTSLEIIDCPNFERL 299
           SL+ +  I+C + ERL
Sbjct: 878 SLSKVAAINCQSLERL 893



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 22/215 (10%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  +++ +  + + LPD L     L  LI+ G +++ ELP  +G L  L  L L+ CS+
Sbjct: 699 NLKRMDLRESKHLKELPD-LSTATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSK 757

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE + ++I  L+S++ +++++C  +K FPEI       + I+R     L L K + ++ +
Sbjct: 758 LEALPTNI-NLESLDYLDLADCLLIKSFPEI------STNIKR-----LNLMKTA-VKEV 804

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
           PS++  +  L  LE+     L+  P     L+ + +L    T I+E+P  + +++ L  L
Sbjct: 805 PSTIKSWSPLRKLEMSYNDNLKEFPHA---LDIITKLYFNDTKIQEIPLWVQKISRLQTL 861

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            L+ C    ++P    +S SL+ +  I+C++  RL
Sbjct: 862 VLEGCKRLVTIPQ---LSDSLSKVAAINCQSLERL 893



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 65/289 (22%)

Query: 391 LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG----TGI 446
           L L  CS L  LPSS+   + L  L +  C KLE LP  + NLE+L+ L +         
Sbjct: 726 LILYGCSSLPELPSSIGSLQKLQVLLLRGCSKLEALPTNI-NLESLDYLDLADCLLIKSF 784

Query: 447 REVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYL 506
            E+  ++ +L L K  +K+      +PS +     L  LE+    N    P     L+ +
Sbjct: 785 PEISTNIKRLNLMKTAVKE------VPSTIKSWSPLRKLEMSYNDNLKEFPHA---LDII 835

Query: 507 KVLTIKGTAIREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNNNLERI 565
             L    T I+E+P  + ++S L+ LVL     L  IP+  + LS + ++          
Sbjct: 836 TKLYFNDTKIQEIPLWVQKISRLQTLVLEGCKRLVTIPQLSDSLSKVAAIN--------- 886

Query: 566 PERLDPLSSLKYLDL-FENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELS 624
                   SL+ LD  F N+    PE    F                  NC KL+ NE  
Sbjct: 887 ------CQSLERLDFSFHNH----PEIFLWFI-----------------NCFKLN-NEAR 918

Query: 625 EIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRH-QSTGSTISLKTPQ 672
           E I           +T  +   + PG E+P    + ++ GS+I +   Q
Sbjct: 919 EFI-----------QTSSSTLAFLPGREVPANITYRRANGSSIMVNLNQ 956



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 23/144 (15%)

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L ++ L++    + LP  L  + +L  L +  C +   LP  IG+L+ L+VL ++G +  
Sbjct: 700 LKRMDLRESKHLKELPD-LSTATNLEELILYGCSSLPELPSSIGSLQKLQVLLLRGCSKL 758

Query: 518 EVPESLGQLSSLEWLVLSD---------------------NNLQIIPESLNQLSSLVSLK 556
           E   +   L SL++L L+D                       ++ +P ++   S L  L+
Sbjct: 759 EALPTNINLESLDYLDLADCLLIKSFPEISTNIKRLNLMKTAVKEVPSTIKSWSPLRKLE 818

Query: 557 LS-NNNLERIPERLDPLSSLKYLD 579
           +S N+NL+  P  LD ++ L + D
Sbjct: 819 MSYNDNLKEFPHALDIITKLYFND 842


>gi|108740002|gb|ABG01389.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740008|gb|ABG01392.1| disease resistance protein [Arabidopsis thaliana]
          Length = 201

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 101/199 (50%), Gaps = 5/199 (2%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            LR   W  +P   L    H E LV L +  S++ +LW   Q L +LK++DL  S  L +
Sbjct: 5   HLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKE 64

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LPDLS A NLE L+L YC SL E  SS   L KLE L +  C  L  +PT I+   L   
Sbjct: 65  LPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFF 124

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS LK  P + S H+ S L +    +EELP+SI   + +  L+I      + ++  
Sbjct: 125 NMHGCSQLKKFPGI-STHI-SRLVIDDTVVEELPTSIILCTRLRTLMISGSGNFKTLTYL 182

Query: 224 IFKLQFLE--SIRIHRCPN 240
              L +L+     I + PN
Sbjct: 183 PLSLTYLDLRCTGIEKIPN 201



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L+LK  S+LE +      L +++ ++++  S+LK  P++     + + +ER     L
Sbjct: 28  LVELDLKE-SQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLS----NATNLER-----L 77

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
           +L+ C  L  +PSS    + L +L I +C KLE +P  L NL +L+   + G + +++ P
Sbjct: 78  ELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPT-LINLASLDFFNMHGCSQLKKFP 136

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                  +S+L +   +  E LP+ + +   L +L I    NF  L     +L YL    
Sbjct: 137 G--ISTHISRLVIDD-TVVEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLD--- 190

Query: 511 IKGTAIREVP 520
           ++ T I ++P
Sbjct: 191 LRCTGIEKIP 200



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 26/176 (14%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 48  LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIH 104

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC+ L+  P +    I+ + ++        ++ CS+L+  P       +  S  +ID   
Sbjct: 105 NCTKLEVVPTL----INLASLD-----FFNMHGCSQLKKFPG----ISTHISRLVIDDTV 151

Query: 423 LERLPDELGNLEALEELRVEGTG----IREVPKSLAQLALSKLKLKKCSSFESLPS 474
           +E LP  +     L  L + G+G    +  +P SL  L L      +C+  E +P+
Sbjct: 152 VEELPTSIILCTRLRTLMISGSGNFKTLTYLPLSLTYLDL------RCTGIEKIPN 201



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 95/255 (37%), Gaps = 87/255 (34%)

Query: 150 SLPTSIHSKYLKRLVLR---------GCSNLKNLPKMT---SCHLRSTLPLLGVGIEELP 197
           +LPT+ H +YL  L L+         G   L NL KM    S HL+           ELP
Sbjct: 18  ALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLK-----------ELP 66

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSK 257
             +   +N+  L +  CK L  I SS  +L+ LE++ IH C  L                
Sbjct: 67  D-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKL---------------- 109

Query: 258 EQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGT 317
                          E +P+      SL    +  C   ++ P   G    ++RL+ID T
Sbjct: 110 ---------------EVVPT-LINLASLDFFNMHGCSQLKKFP---GISTHISRLVIDDT 150

Query: 318 AIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP--- 374
            + ELP                        +SI     + ++ IS   N K    +P   
Sbjct: 151 VVEELP------------------------TSIILCTRLRTLMISGSGNFKTLTYLPLSL 186

Query: 375 -FCNIDGSGIERIPS 388
            + ++  +GIE+IP+
Sbjct: 187 TYLDLRCTGIEKIPN 201


>gi|15242954|ref|NP_200620.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332009616|gb|AED96999.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 6   SEIQINPYTFSKMTELRLLKFCGSK--NKCMVHSLEGVPFT-ELRYFEWHQFPLKTLN-I 61
           SE+ I+   F ++ +LR LK   S+   K  +H   G+ F   LR   W  +P K L   
Sbjct: 540 SEVTISDDAFKRLHDLRFLKVTKSRYDGKYRMHIPAGIEFPCLLRLLHWEAYPSKCLPPT 599

Query: 62  LHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYC 121
            + E LV L M GS++  LW   Q+L +LK +DL +S  L +LPDL+ A NLE L+L  C
Sbjct: 600 FNPEFLVELNMQGSQLEHLWSGTQSLRNLKNMDLGWSPNLKELPDLTNATNLEDLNLNSC 659

Query: 122 SSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTS 179
            SL E  SS  +L+KL+ L +  C +L  +P  ++   L+R+ + GCS  + +P +++
Sbjct: 660 ESLVEIPSSFSHLHKLKNLWMSYCINLQVIPAHMNLVSLERVTMTGCSRFRKIPVIST 717



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 171/438 (39%), Gaps = 93/438 (21%)

Query: 387 PSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTG 445
           P  +++LN + S+LE L S     ++L ++++     L+ LPD L N   LE+L      
Sbjct: 602 PEFLVELNMQGSQLEHLWSGTQSLRNLKNMDLGWSPNLKELPD-LTNATNLEDL------ 654

Query: 446 IREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEY 505
                            L  C S   +PS       L +L +  C N   +P  + NL  
Sbjct: 655 ----------------NLNSCESLVEIPSSFSHLHKLKNLWMSYCINLQVIPAHM-NLVS 697

Query: 506 LKVLTIKG-TAIREVP---------------------ESLGQLSSLEWLVLSDN----NL 539
           L+ +T+ G +  R++P                      S+     L +L +S N     L
Sbjct: 698 LERVTMTGCSRFRKIPVISTHINYLDIAHNTEFEVVHASIALWCRLHYLNMSYNENFMGL 757

Query: 540 QIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFE-NNLDRIPEYLRSFPT- 597
             +P SL QL       L  +++ERIP+ +  L  L  LDL     L  +PE   S    
Sbjct: 758 THLPMSLTQLI------LRYSDIERIPDCIKALHQLFSLDLTGCRRLASLPELPGSLLDL 811

Query: 598 ------SIPSEFTSL---RLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGETYITKSMYF 648
                 S+ + F+ L   R  ++  NC KL              +  +   + I      
Sbjct: 812 EAEDCESLETVFSPLHTPRALLNFTNCFKLGGQA---------RRAIIRRRSEIIGKALL 862

Query: 649 PGNEIPKWFRHQSTGS--TISLKTPQPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRK 706
           PG E+P  F H++ G+  TI L   +P+ Y+  + +  CVV++          + E  + 
Sbjct: 863 PGREVPAEFDHRAKGNSLTIILNGYRPS-YD-FIQYLVCVVIS---------PNQEITKI 911

Query: 707 CNLFDVVCDRRSEGYDSYTSSYLGKISHVESDHVFL---GSSIFAGENSCKRSDEFFFHI 763
            +   ++C      + SY   Y+G +S    +H+F+   G  +    +   R   F F  
Sbjct: 912 SDSSTLLCHTNGYIFPSYEEVYIGAVSKCRKEHLFIFRSGYYLNVDPSGASREIVFEFSS 971

Query: 764 DRSCCEVKKCGIHFVHAQ 781
                ++ +CG+    AQ
Sbjct: 972 KSQDFDIIECGVKIWTAQ 989



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 36/199 (18%)

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLAL 331
           E L SG    ++L ++++   PN + LPD L N   L  L ++   ++ E+P     L  
Sbjct: 616 EHLWSGTQSLRNLKNMDLGWSPNLKELPD-LTNATNLEDLNLNSCESLVEIPSSFSHLHK 674

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIP----------------- 374
           L  L +  C  L+ I + +  L S+E + ++ CS  +  P I                  
Sbjct: 675 LKNLWMSYCINLQVIPAHM-NLVSLERVTMTGCSRFRKIPVISTHINYLDIAHNTEFEVV 733

Query: 375 ------FC---------NIDGSGIERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEII 418
                 +C         N +  G+  +P S+ +L  + S +E +P  +     L SL++ 
Sbjct: 734 HASIALWCRLHYLNMSYNENFMGLTHLPMSLTQLILRYSDIERIPDCIKALHQLFSLDLT 793

Query: 419 DCKKLERLPDELGNLEALE 437
            C++L  LP+  G+L  LE
Sbjct: 794 GCRRLASLPELPGSLLDLE 812



 Score = 39.3 bits (90), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 43/281 (15%)

Query: 151 LPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVG----IEELPSSIKCLSNI 206
           LP + + ++L  L ++G S L++L   T   LR+ L  + +G    ++ELP  +   +N+
Sbjct: 596 LPPTFNPEFLVELNMQG-SQLEHLWSGTQS-LRN-LKNMDLGWSPNLKELPD-LTNATNL 651

Query: 207 GELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKL 266
            +L + SC+ L  I SS   L  L+++ +  C NLQ +      +   R        + +
Sbjct: 652 EDLNLNSCESLVEIPSSFSHLHKLKNLWMSYCINLQVIPAHMNLVSLER--------VTM 703

Query: 267 KKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELG---NLQALNRLIIDG-TAIREL 322
             C R   +P    +   +  L+I     FE +   +     L  LN    +    +  L
Sbjct: 704 TGCSRFRKIP---VISTHINYLDIAHNTEFEVVHASIALWCRLHYLNMSYNENFMGLTHL 760

Query: 323 PEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSG 382
           P  L QL L         S++E I   I  L  + S++++ C  L   PE+P   +D   
Sbjct: 761 PMSLTQLIL-------RYSDIERIPDCIKALHQLFSLDLTGCRRLASLPELPGSLLD--- 810

Query: 383 IERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKL 423
                   L+   C  LE++ S L   ++L  L   +C KL
Sbjct: 811 --------LEAEDCESLETVFSPLHTPRAL--LNFTNCFKL 841


>gi|124010202|ref|ZP_01694858.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123983746|gb|EAY24173.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 521

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 155/294 (52%), Gaps = 22/294 (7%)

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           +S  I +LK +  + I  C NLK  P+  F  ++   + RI        K   L +LP S
Sbjct: 70  LSPRISELKDLRGL-IIKCKNLKTLPK-NFGELNLYSL-RI--------KSDSLIALPKS 118

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
           +   K+L  LE+ +   L RLP  +G L+ L+ L++    +R +PKS+ +L   K  + +
Sbjct: 119 ISKLKNLYRLEL-NANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQNLKKLILR 177

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
             + + LP  +   ++L  L I+      +LP  IG L+ LK L ++  A++++P+S+G+
Sbjct: 178 VDALKKLPKSIGKLQNLKKL-ILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGK 236

Query: 526 LSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNL 585
           L +L+ L+L  + L+ +P+S+ +L +L  L L  N L  +P+ L  L  LK + L  ++L
Sbjct: 237 LQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHL 296

Query: 586 DRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLDPNELSEIIKDGWMKQSVNGE 639
             +P+ + +FP     E   L L V+  N + L P  + +  +  ++K  VNG+
Sbjct: 297 RTLPKSIGNFP-----ELEMLELEVN--NLVALTPG-IGQFKQLKYLK-IVNGQ 341



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 170/334 (50%), Gaps = 21/334 (6%)

Query: 274 SLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLS 333
           +LP      K+L  LE+ +  +  RLP  +G LQ L RL I   ++R LP+ +G+L  L 
Sbjct: 114 ALPKSISKLKNLYRLEL-NANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQNLK 172

Query: 334 KLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPE-------IPFCNIDGSGIERI 386
           KL L+    L+ +  SI KL++++ + I     LK  P+       +    +    ++++
Sbjct: 173 KLILR-VDALKKLPKSIGKLQNLKKL-ILRADALKKLPKSIGKLQNLKKLILRADALKKL 230

Query: 387 PSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
           P S+ KL    KL       + LP S+    +L  L ++   +L  LP  L  L  L+++
Sbjct: 231 PKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQL-VLQVNRLTTLPKSLSQLPKLKKM 289

Query: 440 RVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPD 498
            +    +R +PKS+     L  L+L+  ++  +L   +   K L  L+I++ + F  LP 
Sbjct: 290 TLIAHHLRTLPKSIGNFPELEMLELE-VNNLVALTPGIGQFKQLKYLKIVNGQ-FATLPQ 347

Query: 499 EIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLS 558
            IG+L+ L++L +    +  +P+ +G L  L  L +  + L  +PE+++ L +LV L LS
Sbjct: 348 SIGDLQNLEMLFLLNVPLTTLPKGIGNLKKLRRLQILKSKLTTLPEAIDNLQNLVLLNLS 407

Query: 559 NNNLERIPERLDPLSSLKYLDLFENNLDRIPEYL 592
            N L R+PE +  L +L  L+L  N L + PE L
Sbjct: 408 YNQLTRLPESIGNLQNLGNLNLSHNQLTQFPESL 441


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 246/560 (43%), Gaps = 88/560 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 48  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 105

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 106 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 142

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +    N QF  +P 
Sbjct: 143 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQ---NNQFTILPK 198

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +      LP E+G L
Sbjct: 199 EIGQLQNLQTLNLQDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVLPKEIGQL 249

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L  +   I +L++++ +E+  N  
Sbjct: 250 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVN-NRLTVLPKEIGQLQNLQDLELLMNPL 308

Query: 366 NLKGFPEI----PFCNID-----GSGIER-------------------------IPSSVL 391
           +LK    I    P  N+D       G+ R                          P  +L
Sbjct: 309 SLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVIL 368

Query: 392 KLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           K     +L        +LP  +   K+L  L  +    L+++P E+G L  LE L +E  
Sbjct: 369 KFRNLRELYLYDCGFSTLPKEISRLKNLKYL-ALGLNGLKKIPSEIGQLRNLEALNLEAN 427

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +PK + QL  L +L L + ++ +  P+ +   K L  L++     F   P EIG L
Sbjct: 428 ELERLPKEIGQLRNLQRLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKL 485

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           E L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L 
Sbjct: 486 ENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT 545

Query: 564 RIPERLDPLSSLKYLDLFEN 583
            +P  +  L +L++L L  N
Sbjct: 546 TLPTEIGQLQNLQWLYLQNN 565



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 222/519 (42%), Gaps = 121/519 (23%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 81  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 139

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ +   F  L
Sbjct: 140 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQNN-QFTIL 196

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L  +   I +L++++ +
Sbjct: 197 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN-NRLTVLPKEIGQLQNLQML 255

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   K+L +L +++
Sbjct: 256 ----CS-----PE------------------------NRLTALPKEMGQLKNLQTLNLVN 282

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPK-------SL 453
             +L  LP E+G L+ L++L             R++         +REV +       +L
Sbjct: 283 -NRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNL 341

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC------------KNFM---- 494
           AQ   L +  L+L+  +  +  P  +   ++L  L + DC            KN      
Sbjct: 342 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 401

Query: 495 ------RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                 ++P EIG L  L+ L ++   +  +P+ +GQL +L+ L L  N L+I P  + Q
Sbjct: 402 GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQ 461

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFP--------- 596
           L  L  L LS N     P+ +  L +L+ L+L  N L  +P   E L++           
Sbjct: 462 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQF 521

Query: 597 TSIPSEFTSLR--LSVDLRNC-LKLDPNELSEIIKDGWM 632
           T +P E   L+   ++DLRN  L   P E+ ++    W+
Sbjct: 522 TVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 560



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 3/173 (1%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
           +  +KL  LP E+G L+ L+EL ++   +  +PK + QL  L +L L+  +   + P+ +
Sbjct: 50  LSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRD-NQLATFPAVI 108

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              + L SL++ + +  + LP+EIG L+ L+ L +    +   P+ +GQL +L+ L LS+
Sbjct: 109 VELQKLESLDLSENR-LIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 167

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           N L  +P+ + QL +L +L L NN    +P+ +  L +L+ L+L +N L  +P
Sbjct: 168 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLP 220



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 206/492 (41%), Gaps = 123/492 (25%)

Query: 52  HQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLA 110
           +QF +    I   +NL +L +  +++  L  ++  L +L+ + L+ ++L T LP ++   
Sbjct: 191 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRL-TVLPKEIGQL 249

Query: 111 QNLEILDLGYCS---SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
           QNL++L    CS    LT     +  L  L+ L+L   + LT LP  I            
Sbjct: 250 QNLQML----CSPENRLTALPKEMGQLKNLQTLNLVNNR-LTVLPKEIGQ---------- 294

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
             NL++L  + +                 P S+K    I +L   S   L  ++      
Sbjct: 295 LQNLQDLELLMN-----------------PLSLKERKRIQKLFPDSNLDLREVAED---- 333

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSL 285
                  ++R  NL              ++E+P    +L+L+     +  P     F++L
Sbjct: 334 ------GVYRNLNL--------------AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNL 373

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             L + DC  F  LP E+  L+ L  L +    ++++P  +GQL  L  L L+  +ELE 
Sbjct: 374 RELYLYDC-GFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE-ANELER 431

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           +   I +L++++ + +   + LK FP         + IE++           KL+ L  S
Sbjct: 432 LPKEIGQLRNLQRLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLS 471

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
           +  F +               P E+G LE L+ L ++   +  +P  + QL         
Sbjct: 472 VNQFTT--------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL--------- 508

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
                         K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQ
Sbjct: 509 --------------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQ 553

Query: 526 LSSLEWLVLSDN 537
           L +L+WL L +N
Sbjct: 554 LQNLQWLYLQNN 565



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 496 LPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSL 555
           LP EIG L+ L+ L +K   +  +P+ +GQL +L+ L L DN L   P  + +L  L SL
Sbjct: 58  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 117

Query: 556 KLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFP------------TSIPSEF 603
            LS N L  +P  +  L +L+ L L++N L   P+ +                T++P E 
Sbjct: 118 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 177

Query: 604 TSLR--LSVDLRN 614
             L+   ++DL+N
Sbjct: 178 GQLKNLQTLDLQN 190



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%)

Query: 506 LKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERI 565
           ++VL + G  +  +P+ +GQL +L+ L L  N L  +P+ + QL +L  L L +N L   
Sbjct: 45  VRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATF 104

Query: 566 PERLDPLSSLKYLDLFENNLDRIP 589
           P  +  L  L+ LDL EN L  +P
Sbjct: 105 PAVIVELQKLESLDLSENRLIILP 128


>gi|334183667|ref|NP_001185325.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196312|gb|AEE34433.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1051

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 166/327 (50%), Gaps = 45/327 (13%)

Query: 2   SKINSEIQINPYTFSKMTELRLLKFC---GSKNKCMVHSLEGVPF--TELRYFEWHQFPL 56
           S+++SE+ I+   F  M  L+ L+F    G ++   ++  +G+ +   +L+  EW  FPL
Sbjct: 580 SELSSELNISERAFEGMPNLKFLRFYYRYGDESD-KLYLPQGLNYLSQKLKILEWDHFPL 638

Query: 57  KTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEI 115
             + +    E LV L M  SK+ +LW+  + L +L  + L +SK+L +LPDLS A NL+ 
Sbjct: 639 TCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPDLSTATNLQE 698

Query: 116 LDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKY-LKRLVLRGCSNLKNL 174
           L L  CSSL E  SSI     L+ L L+ C SL  LP+SI + + L++L L GCS L+ L
Sbjct: 699 LFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVL 758

Query: 175 PK-----------MTSCHLRSTLP----------LLGVGIEELPSSIKCLSNIGEL-LIY 212
           P            +T C +    P          LL   I+E+PSSIK    + +L L Y
Sbjct: 759 PANINLESLDELDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSY 818

Query: 213 SCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRP 272
           +    +N+   +  L  + ++  +   +++  E+P      +R +      L L  C + 
Sbjct: 819 N----QNLKGFMHALDIITTMYFN---DIEMQEIPLWVKKISRLQ-----TLILNGCKKL 866

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERL 299
            SLP    +  SL+ L++++C + ERL
Sbjct: 867 VSLPQ---LPDSLSYLKVVNCESLERL 890



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 173/408 (42%), Gaps = 81/408 (19%)

Query: 391  LKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP 450
            L L KCS L  LPSS+    +L  L +  C  L  LP  +GNL  L++L + G       
Sbjct: 699  LFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNG------- 751

Query: 451  KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                           CS  E LP+ + + +SL  L++ DC    R P+   N++ LK+L 
Sbjct: 752  ---------------CSKLEVLPANINL-ESLDELDLTDCLVLKRFPEISTNIKVLKLLR 795

Query: 511  IKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLD 570
               T I+EVP S+     L  L LS N  Q +   ++ L  + ++  ++  ++ IP  + 
Sbjct: 796  ---TTIKEVPSSIKSWPRLRDLELSYN--QNLKGFMHALDIITTMYFNDIEMQEIPLWVK 850

Query: 571  PLSSLKYLDLFE----NNLDRIPEYLRSFPT-------SIPSEFTSLRLSVDLRNCLKLD 619
             +S L+ L L       +L ++P+ L             +   F + ++S+   NCLKL+
Sbjct: 851  KISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLGFINCLKLN 910

Query: 620  PNELSEIIKDGWMKQSVNGETYITKSMYFPGNEIPKWFRHQS-TGSTISL---KTPQPTG 675
                  II+              TK    PG E+P +F H++  GS++ +   + P  T 
Sbjct: 911  KEAKELIIQ------------ITTKCTVLPGREVPVYFTHRTKNGSSLRVNLNRRPLSTA 958

Query: 676  YNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGKISHV 735
                  F  C+++   V++ C+   V++     +F      R     SY    LG     
Sbjct: 959  SR----FKACILL---VNKYCKENEVKE-----VFG-----RKMMKASYCIIDLGLDVQC 1001

Query: 736  ESDHVFLGSS------IFAGENSCKRSDEFF--FHIDRSCCEVKKCGI 775
               H FL  S      IF  E     S+E F  F +D +   +K+CGI
Sbjct: 1002 RPTHHFLPPSLTEHLYIFDFEADVT-SNELFCDFQVDSNEMVIKECGI 1048



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 21/215 (9%)

Query: 284 SLTSLEIIDCPNFERLPDELGNLQALNRLIIDG-TAIRELPEGLGQLALLSKLELKNCSE 342
           +L  L ++ C +   LP  +G    L +L ++  T++ ELP  +G L  L KL L  CS+
Sbjct: 695 NLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSK 754

Query: 343 LEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESL 402
           LE + ++I  L+S++ +++++C  LK FPEI   NI           VLKL + + ++ +
Sbjct: 755 LEVLPANI-NLESLDELDLTDCLVLKRFPEIS-TNI----------KVLKLLRTT-IKEV 801

Query: 403 PSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKL 461
           PSS+  +  L  LE+   + L+     +  L+ +  +      ++E+P  + +++ L  L
Sbjct: 802 PSSIKSWPRLRDLELSYNQNLKGF---MHALDIITTMYFNDIEMQEIPLWVKKISRLQTL 858

Query: 462 KLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRL 496
            L  C    SLP    +  SL+ L++++C++  RL
Sbjct: 859 ILNGCKKLVSLPQ---LPDSLSYLKVVNCESLERL 890


>gi|297848164|ref|XP_002891963.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337805|gb|EFH68222.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 811

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 110/211 (52%), Gaps = 6/211 (2%)

Query: 5   NSEIQINPYTFSKMTELRLLKF--CGSKNKCMVHSLEGVPFT-ELRYFEWHQFPLKTL-N 60
           NSE+ I+   F +M  L  LK    G   K  ++  E + F   LR   W  +P K+L  
Sbjct: 311 NSELMISARAFQRMHNLFFLKVYNAGRTGKRQLYVPEEMEFPPRLRLLYWDAYPRKSLPR 370

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
               ENLV L M  S++ +LW+  Q L +LK +D   S  L +LPDLS A NLE L+L  
Sbjct: 371 RFFAENLVKLNMKDSELEKLWEGTQTLANLKEMDFTLSSHLKELPDLSNAINLERLNLSA 430

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
           CS+L E  SSI  L+K+  L +  C +L  +P+ I+   L  + L GCS L+  P +   
Sbjct: 431 CSALVELPSSISNLHKIAELQMVNCSNLEVIPSLINLTSLNSINLLGCSRLRRFPDLPIN 490

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLI 211
               TL +    +EELP+S++  S +  + I
Sbjct: 491 IW--TLYVTEKVVEELPASLRRCSRLNHVNI 519



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 35/249 (14%)

Query: 208 ELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSE---- 263
           ++L+Y    LE  S  +   +  +  R+H   NL FL++ +    G R    P       
Sbjct: 299 QILVYVSIDLEENSELMISARAFQ--RMH---NLFFLKVYNAGRTGKRQLYVPEEMEFPP 353

Query: 264 ----LKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL---PDELGNLQALNRLIIDG 316
               L     PR +SLP  +   ++L  L + D    E+L      L NL+ ++  +   
Sbjct: 354 RLRLLYWDAYPR-KSLPR-RFFAENLVKLNMKDS-ELEKLWEGTQTLANLKEMDFTL--S 408

Query: 317 TAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFC 376
           + ++ELP+ L     L +L L  CS L  + SSI  L  +  +++ NCSNL+  P +   
Sbjct: 409 SHLKELPD-LSNAINLERLNLSACSALVELPSSISNLHKIAELQMVNCSNLEVIPSL--- 464

Query: 377 NIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEAL 436
                 I     + + L  CS+L   P       +L   E    K +E LP  L     L
Sbjct: 465 ------INLTSLNSINLLGCSRLRRFPDLPINIWTLYVTE----KVVEELPASLRRCSRL 514

Query: 437 EELRVEGTG 445
             + ++G G
Sbjct: 515 NHVNIQGNG 523



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 125/289 (43%), Gaps = 47/289 (16%)

Query: 400 ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE-GTGIREVPKSLAQLAL 458
           +SLP      ++L  L + D + LE+L +    L  L+E+     + ++E+P     + L
Sbjct: 366 KSLPRRF-FAENLVKLNMKDSE-LEKLWEGTQTLANLKEMDFTLSSHLKELPDLSNAINL 423

Query: 459 SKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG-TAIR 517
            +L L  CS+   LPS +     +  L++++C N   +P  I NL  L  + + G + +R
Sbjct: 424 ERLNLSACSALVELPSSISNLHKIAELQMVNCSNLEVIPSLI-NLTSLNSINLLGCSRLR 482

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKY 577
             P+                    +P       ++ +L ++   +E +P  L   S L +
Sbjct: 483 RFPD--------------------LP------INIWTLYVTEKVVEELPASLRRCSRLNH 516

Query: 578 LDLFENNLDRIPEYLRSFPTSIPSEFTSLRLS---VDLRNCLKLDPN----ELSEIIKDG 630
           +++  N       + ++F T +P+  T+L L        +CLK   N     LS   +  
Sbjct: 517 VNIQGNG------HPKTFLTLLPTSVTNLELHGRRFMANDCLKGLHNLAFLTLSCCDRLT 570

Query: 631 WMKQSVNGETYITKSMYFPGNEIPKWFRHQSTGSTISLKTPQPTGYNKL 679
             ++++  + ++      PG  +P  F H++ G+++   T   + +N+ 
Sbjct: 571 EARRAIIQQLFVYGLAILPGRAVPAEFDHRARGNSL---TVHHSAFNRF 616


>gi|168043934|ref|XP_001774438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674290|gb|EDQ60801.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 324

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 112/322 (34%), Positives = 165/322 (51%), Gaps = 18/322 (5%)

Query: 283 KSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IRELPEGLGQLALLSKLELKNCS 341
            SL SL + +C     LP+ELGNL +L  + + G   +  LP+ LG L+ L+ L L  C 
Sbjct: 1   TSLISLNLSECWELTSLPNELGNLTSLTSINLSGCLNLTSLPDELGNLSSLTSLNLSECW 60

Query: 342 ELEYISSSIFKLKSVESIEISNCSNLKGFP-EIPFCNIDGSGIERIPSSVLKLNKCSKLE 400
           +L  + + +  L S+ S+++S CS L   P E+ +             + L ++KC  L 
Sbjct: 61  KLTLLPNELGYLTSLTSLDLSGCSCLILLPNELGY---------LTSLTTLDVSKCQSLV 111

Query: 401 SLPSSLCMFKSLTSLEIIDCKKLERLPDELGN-LEALEELRVEGTGIREVPKSLAQL-AL 458
           SLP+ L    SL SL +  C  L  LP+ELGN          E   +R +P  L  L +L
Sbjct: 112 SLPNELGNLTSLNSLNLSACLNLTSLPNELGNLSSLTSLKLSECEKLRLLPNELGYLTSL 171

Query: 459 SKLKL-KKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTI-KGTAI 516
           + L L  KC S  SLP+ L    SL  L + +C     LP+E+GNL  L  L + +   +
Sbjct: 172 TSLNLSAKCESLASLPNELGNFTSLIFLNLCECWELASLPNELGNLTSLTYLNLDECLNL 231

Query: 517 REVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN-NNLERIPERLDPLSS 574
             +P  LG LSSL  L LS+   L+++P  L  L+S+ SL LS  +NL  +P  L  L+S
Sbjct: 232 TSLPNELGNLSSLTSLNLSECEKLRLLPNELGYLTSMTSLNLSACSNLTSLPNELGKLTS 291

Query: 575 LKYLDLFE-NNLDRIPEYLRSF 595
           L  LD+ +  +L  +P  L +F
Sbjct: 292 LTALDVSKCESLASLPNELGNF 313



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 134/256 (52%), Gaps = 12/256 (4%)

Query: 262 SELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTA-IR 320
           + L L  C     LP+      SLT+L++  C +   LP+ELGNL +LN L +     + 
Sbjct: 76  TSLDLSGCSCLILLPNELGYLTSLTTLDVSKCQSLVSLPNELGNLTSLNSLNLSACLNLT 135

Query: 321 ELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS-NCSNLKGFPEIPFCNID 379
            LP  LG L+ L+ L+L  C +L  + + +  L S+ S+ +S  C +L   P     N  
Sbjct: 136 SLPNELGNLSSLTSLKLSECEKLRLLPNELGYLTSLTSLNLSAKCESLASLP-----NEL 190

Query: 380 GSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
           G+    I    L L +C +L SLP+ L    SLT L + +C  L  LP+ELGNL +L  L
Sbjct: 191 GNFTSLI---FLNLCECWELASLPNELGNLTSLTYLNLDECLNLTSLPNELGNLSSLTSL 247

Query: 440 RV-EGTGIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLP 497
            + E   +R +P  L  L +++ L L  CS+  SLP+ L    SLT+L++  C++   LP
Sbjct: 248 NLSECEKLRLLPNELGYLTSMTSLNLSACSNLTSLPNELGKLTSLTALDVSKCESLASLP 307

Query: 498 DEIGNLEYLKVLTIKG 513
           +E+GN   L  L + G
Sbjct: 308 NELGNFTSLTYLNLDG 323



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 160/370 (43%), Gaps = 61/370 (16%)

Query: 76  KVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQYL 134
           ++T L +++ NL SL  I+L     LT LPD L    +L  L+L  C  LT   + + YL
Sbjct: 13  ELTSLPNELGNLTSLTSINLSGCLNLTSLPDELGNLSSLTSLNLSECWKLTLLPNELGYL 72

Query: 135 NKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIE 194
             L  LDL  C  L  LP  +   YL  L     S  ++L                    
Sbjct: 73  TSLTSLDLSGCSCLILLPNELG--YLTSLTTLDVSKCQSLVS------------------ 112

Query: 195 ELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDGT 254
            LP+ +  L+++  L + +C  L ++ + +  L  L S+++  C  L+ L      +   
Sbjct: 113 -LPNELGNLTSLNSLNLSACLNLTSLPNELGNLSSLTSLKLSECEKLRLLPNELGYLTSL 171

Query: 255 RSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLII 314
            S    +      KC    SLP+    F SL  L + +C     LP+ELGNL +L  L +
Sbjct: 172 TSLNLSA------KCESLASLPNELGNFTSLIFLNLCECWELASLPNELGNLTSLTYLNL 225

Query: 315 DGTA-IRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEI 373
           D    +  LP  LG L+ L+ L L  C +L  + + +  L S+ S+ +S CSNL      
Sbjct: 226 DECLNLTSLPNELGNLSSLTSLNLSECEKLRLLPNELGYLTSMTSLNLSACSNLT----- 280

Query: 374 PFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNL 433
                                      SLP+ L    SLT+L++  C+ L  LP+ELGN 
Sbjct: 281 ---------------------------SLPNELGKLTSLTALDVSKCESLASLPNELGNF 313

Query: 434 EALEELRVEG 443
            +L  L ++G
Sbjct: 314 TSLTYLNLDG 323



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 117/246 (47%), Gaps = 40/246 (16%)

Query: 410 KSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT------------------------- 444
            SL SL + +C +L  LP+ELGNL +L  + + G                          
Sbjct: 1   TSLISLNLSECWELTSLPNELGNLTSLTSINLSGCLNLTSLPDELGNLSSLTSLNLSECW 60

Query: 445 GIREVPKSLAQL-ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +P  L  L +L+ L L  CS    LP+ L    SLT+L++  C++ + LP+E+GNL
Sbjct: 61  KLTLLPNELGYLTSLTSLDLSGCSCLILLPNELGYLTSLTTLDVSKCQSLVSLPNELGNL 120

Query: 504 EYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSNN- 560
             L  L +     +  +P  LG LSSL  L LS+   L+++P  L  L+SL SL LS   
Sbjct: 121 TSLNSLNLSACLNLTSLPNELGNLSSLTSLKLSECEKLRLLPNELGYLTSLTSLNLSAKC 180

Query: 561 -NLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNCLKLD 619
            +L  +P  L   +SL +L+L E         L S P  +    TSL   ++L  CL L 
Sbjct: 181 ESLASLPNELGNFTSLIFLNLCE------CWELASLPNEL-GNLTSLTY-LNLDECLNLT 232

Query: 620 --PNEL 623
             PNEL
Sbjct: 233 SLPNEL 238


>gi|421116962|ref|ZP_15577334.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. Fiocruz LV133]
 gi|410011461|gb|EKO69580.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. Fiocruz LV133]
          Length = 1616

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 39/268 (14%)

Query: 326  LGQLALLSKLELK--NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
            L +L  L K+EL   N  +L  ++S I    ++E IE+ N   +KGF      + D S +
Sbjct: 1168 LSELKNLKKIELDDWNLKDLNVLNSCI----NLEEIELRN---IKGFE----TDFDCSEL 1216

Query: 384  ERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                 + + LN   +K E  P S+  F++LTSL + DCK L  +P+ +GNL+ L +L + 
Sbjct: 1217 LNESKATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLIDLHLN 1275

Query: 443  GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
               +  +P SL  L                       + LT L  ID  +F  +PD + +
Sbjct: 1276 SNQLTTLPASLGTL-----------------------EQLTEL-YIDTNSFTTIPDAVLS 1311

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
            L+ LK    +   I  +P  +G L+SLE L L DN L  +P ++  LSSL  + LS N  
Sbjct: 1312 LKNLKTFWARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKF 1371

Query: 563  ERIPERLDPLSSLKYLDLFENNLDRIPE 590
               PE +  L +LK+LD+ EN + ++PE
Sbjct: 1372 SEFPEPILYLKNLKHLDVGENKIRQLPE 1399



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 34/344 (9%)

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL----LIYSCKRLENISSSIF 225
            N KN+ K+T  ++RS+  +  +   +  + ++ L+  G +    L+   K L+ I    +
Sbjct: 1123 NHKNISKITKMYIRSSYKITSIQELKFFTKLEELTINGPVTDSSLLSELKNLKKIELDDW 1182

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC--------PRPESLPS 277
             L+ L    ++ C NL+ +E+   NI G  +    S  L   K          + E  P 
Sbjct: 1183 NLKDLNV--LNSCINLEEIEL--RNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPI 1238

Query: 278  GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
                F++LTSL + DC     +P+ +GNL+ L  L ++   +  LP  LG L  L++L +
Sbjct: 1239 SVTRFQNLTSLSLRDC-KLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTELYI 1297

Query: 338  KNCSELEYISSSIFKLKSVESI-----EISNCSNLKG-FPEIPFCNIDGSGIERIPSSVL 391
             + +    I  ++  LK++++      +IS   N  G    +   N+  + +  +P+++ 
Sbjct: 1298 -DTNSFTTIPDAVLSLKNLKTFWARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ 1356

Query: 392  KLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
             L+  +K+          P  +   K+L  L++ +  K+ +LP+ +GNL  L+ L ++ T
Sbjct: 1357 NLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGE-NKIRQLPETIGNLSNLKSLDIKET 1415

Query: 445  GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEI 487
             I  +P+S+  L  L  + L K   F  LP  L   +SL  ++ 
Sbjct: 1416 WIESLPQSIQNLTQLETIYLPKA-KFRDLPDFLANMESLKKIKF 1458



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 175/433 (40%), Gaps = 72/433 (16%)

Query: 85   QNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
            +N+  + ++ ++ S  +T + +L     LE L +    + +   S ++ L K+E+ D + 
Sbjct: 1125 KNISKITKMYIRSSYKITSIQELKFFTKLEELTINGPVTDSSLLSELKNLKKIELDDWN- 1183

Query: 145  CKSLTSLPTSIHSKYLKRLVLRG------CSNLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
             K L  L + I+ + ++   ++G      CS L N  K T  HL     L G   E  P 
Sbjct: 1184 LKDLNVLNSCINLEEIELRNIKGFETDFDCSELLNESKAT-IHLN----LSGTKFERFPI 1238

Query: 199  SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--------- 249
            S+    N+  L +  CK L  +  SI  L+ L  I +H   N Q   +P+          
Sbjct: 1239 SVTRFQNLTSLSLRDCK-LSEVPESIGNLKRL--IDLHLNSN-QLTTLPASLGTLEQLTE 1294

Query: 250  -NIDGTRSKEQPSSELKLKK----CPRPESLPSGQCMFKSLTSLEIIDCPN--------- 295
              ID       P + L LK       R   + +      +LTSLE ++  +         
Sbjct: 1295 LYIDTNSFTTIPDAVLSLKNLKTFWARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTT 1354

Query: 296  ----------------FERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                            F   P+ +  L+ L  L +    IR+LPE +G L+ L  L++K 
Sbjct: 1355 IQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKE 1414

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
             + +E +  SI  L  +E+I +        F ++P    +   +++I     + N+ +K 
Sbjct: 1415 -TWIESLPQSIQNLTQLETIYLPKAK----FRDLPDFLANMESLKKIKFESEEYNQLTK- 1468

Query: 400  ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
                   C F+    ++++   K     D++ NL        +G    ++ +   +L +S
Sbjct: 1469 ------WCEFEYSKYIKLLHGGKYPEARDKIKNL-----FTTKGEDFLKLNQWEVKLKIS 1517

Query: 460  KLKLKKCSSFESL 472
            +   +K  +F ++
Sbjct: 1518 ESYYRKAEAFATV 1530


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 246/560 (43%), Gaps = 88/560 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +    N QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQ---NNQFTILPK 203

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +      LP E+G L
Sbjct: 204 EIGQLQNLQTLNLQDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVLPKEIGQL 254

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L  +   I +L++++ +E+  N  
Sbjct: 255 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVN-NRLTVLPKEIGQLQNLQDLELLMNPL 313

Query: 366 NLKGFPEI----PFCNID-----GSGIER-------------------------IPSSVL 391
           +LK    I    P  N+D       G+ R                          P  +L
Sbjct: 314 SLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVIL 373

Query: 392 KLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           K     +L        +LP  +   K+L  L  +    L+++P E+G L  LE L +E  
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYL-ALGLNGLKKIPSEIGQLRNLEALNLEAN 432

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +PK + QL  L +L L + ++ +  P+ +   K L  L++     F   P EIG L
Sbjct: 433 ELERLPKEIGQLRNLQRLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKL 490

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           E L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L 
Sbjct: 491 ENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT 550

Query: 564 RIPERLDPLSSLKYLDLFEN 583
            +P  +  L +L++L L  N
Sbjct: 551 TLPTEIGQLQNLQWLYLQNN 570



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 223/519 (42%), Gaps = 121/519 (23%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 86  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ +   F  L
Sbjct: 145 LGLYKNKL-TTFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQNN-QFTIL 201

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L  +   I +L++++++
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN-NRLTVLPKEIGQLQNLQTL 260

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   K+L +L +++
Sbjct: 261 ----CS-----PE------------------------NRLTALPKEMGQLKNLQTLNLVN 287

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPK-------SL 453
             +L  LP E+G L+ L++L             R++         +REV +       +L
Sbjct: 288 -NRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNL 346

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC------------KNFM---- 494
           AQ   L +  L+L+  +  +  P  +   ++L  L + DC            KN      
Sbjct: 347 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 495 ------RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                 ++P EIG L  L+ L ++   +  +P+ +GQL +L+ L L  N L+I P  + Q
Sbjct: 407 GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQ 466

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFP--------- 596
           L  L  L LS N     P+ +  L +L+ L+L  N L  +P   E L++           
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQF 526

Query: 597 TSIPSEFTSLR--LSVDLRNC-LKLDPNELSEIIKDGWM 632
           T +P E   L+   ++DLRN  L   P E+ ++    W+
Sbjct: 527 TVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 210/486 (43%), Gaps = 83/486 (17%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLG 119
           I   +NL  L +  +++T L  ++  L +L+ +DL+ ++  T LP ++   QNL+ L+L 
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQF-TILPKEIGQLQNLQTLNL- 216

Query: 120 YCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPK-MT 178
             + L      I  L  L+ L L R   LT LP  I      + +    + L  LPK M 
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYL-RNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMG 275

Query: 179 SCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRC 238
                 TL L+   +  LP  I  L N           L+++   +  L   E  RI + 
Sbjct: 276 QLKNLQTLNLVNNRLTVLPKEIGQLQN-----------LQDLELLMNPLSLKERKRIQKL 324

Query: 239 PNLQFLEMPSCNIDGTR-----SKEQPSS--ELKLKKCPRPESLPSGQCMFKSLTSLEII 291
                L++     DG       ++E+P    +L+L+     +  P     F++L  L + 
Sbjct: 325 FPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLY 384

Query: 292 DCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIF 351
           DC  F  LP E+  L+ L  L +    ++++P  +GQL  L  L L+  +ELE +   I 
Sbjct: 385 DC-GFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE-ANELERLPKEIG 442

Query: 352 KLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKS 411
           +L++++ + +   + LK FP         + IE++           KL+ L  S+  F +
Sbjct: 443 QLRNLQRLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLSVNQFTT 482

Query: 412 LTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFES 471
                          P E+G LE L+ L ++   +  +P  + QL               
Sbjct: 483 --------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL--------------- 513

Query: 472 LPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEW 531
                   K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQL +L+W
Sbjct: 514 --------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQW 564

Query: 532 LVLSDN 537
           L L +N
Sbjct: 565 LYLQNN 570



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 3/173 (1%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
           +  +KL  LP E+G L+ L+EL ++   +  +PK + QL  L +L L+  +   + P+ +
Sbjct: 55  LSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRD-NQLATFPAVI 113

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              + L SL++ + +  + LP+EIG L+ L+ L +    +   P+ +GQL +L+ L LS+
Sbjct: 114 VELQKLESLDLSENR-LIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           N L  +P+ + QL +L +L L NN    +P+ +  L +L+ L+L +N L  +P
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLP 225


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 211/472 (44%), Gaps = 44/472 (9%)

Query: 155 IHSKYLKRLVLRGCSNLKNLPK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYS 213
           I   Y  R++     NL  LP    + +  + L L    ++ LP+S + L+N+  L + +
Sbjct: 123 IFEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLCN 182

Query: 214 CKRLENISSSIFKLQFLESIRIHRCPNLQFL------EMPSCNIDGTR---SKEQPS--S 262
             +   I   +F+L     I +   P  Q +       +   N  G +   S   PS  S
Sbjct: 183 -NQFSEIPDCLFRLPSACDINLKENPLSQEILDQLNQRVNQTNYQGPKFQVSSPTPSFCS 241

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCP-------NFERLPDELGNLQALNRLIID 315
           EL  +  PR E +     + +     EI D         N + LP   GNL  L  L + 
Sbjct: 242 ELMDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPSSFGNLINLFFLNLI 301

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPF 375
              ++ LP+  G L  L  L L N ++LE + +S F   +  +      + L+  P+  F
Sbjct: 302 NNQLQTLPDSFGNLTNLQFLYLYN-NKLELLPTS-FGNLNQLNKLNLANNQLQILPQF-F 358

Query: 376 CNI--------DGSGIERIPSSVLKLNKCSKLE-------SLPSSLCMFKSLTSLEIIDC 420
            N+        + + +E +P+S  KL +  KL+       SLP    +F +L +L+ +D 
Sbjct: 359 GNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPE---LFTNLINLQTLDL 415

Query: 421 KK--LERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
               L  LPD  GNL  L  L +    ++ +P S   L   +      +  +SLP  L  
Sbjct: 416 NNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTN 475

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
             +L +L++ +  N   LP+  GNL  +  L +       +PES G L+ L+ L L +N 
Sbjct: 476 LVNLQTLDL-NNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQ 534

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPE 590
           +QI+PE+ + L +L  L L+ N L+ +PE    L++L+ L+L  NN + IPE
Sbjct: 535 IQILPETFSNLINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFETIPE 586



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query: 534 LSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIPEYLR 593
           L++ NL I+P S   L+ L  L L+NN L+ +P   + L++L+ L+L  N    IP+ L 
Sbjct: 134 LAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLCNNQFSEIPDCLF 193

Query: 594 SFPTS 598
             P++
Sbjct: 194 RLPSA 198


>gi|116788284|gb|ABK24822.1| unknown [Picea sitchensis]
          Length = 495

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 156/322 (48%), Gaps = 38/322 (11%)

Query: 284 SLTSLEIIDCPNFERLPD--ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNC- 340
           SL  L    CPN   LP    +G L+ L    + G+ ++ L E   Q+     L+L+   
Sbjct: 153 SLIWLRWNKCPNLS-LPWWIPMGRLRVLQ---VYGSELKTLWEDESQVPWQVPLQLRELE 208

Query: 341 --SELEYISSSIFKLKSVESIEI----SNCSNLKGFPEIPFCNIDGSGIERIPS-SVLKL 393
             + L  I  SI  L+ +E I +    S   +L   P+  FC        R+ S   L L
Sbjct: 209 INAPLSNIPKSIGWLEHLERIVVAGFLSGHVHLTKLPK-EFC--------RLRSLRDLVL 259

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPKS 452
            +CSK++SLP S C   +L  +++  C  LERLPD +G L+ L  + +     +  +P S
Sbjct: 260 TECSKMKSLPDSFCHLWNLQHIDLSFCCNLERLPDSIGRLQGLRHINLSYCHDLERLPDS 319

Query: 453 LAQL-ALSKLKLKKCSSFESLPS----------RLYVSKSLTSLEIIDCKNFMRLPDEIG 501
           + +L  L  + L+ C + ESLP                  L  + +  C +  RLPD   
Sbjct: 320 IGRLRGLQHIDLRGCHNLESLPDSFGELWDLPYSFGEPWDLRHINLSGCHDLQRLPDSFV 379

Query: 502 NLEYLKVLTIKGTA-IREVPESLGQLSSLEWLVLSD-NNLQIIPESLNQLSSLVSLKLSN 559
           NL YL+ + ++G   ++ +P+  G L +L+ + LS+ ++L+ +P+S   L +L  + LS 
Sbjct: 380 NLRYLQHIDLQGCHNLQSLPDGFGDLRNLDHVNLSNCHDLEWLPDSFGNLRNLQYIDLSG 439

Query: 560 -NNLERIPERLDPLSSLKYLDL 580
            +NLER+P      + LKYLD+
Sbjct: 440 CHNLERLPNYFRNFNKLKYLDV 461



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 140/322 (43%), Gaps = 47/322 (14%)

Query: 123 SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNLPKMTSCH 181
           +L E  S + +   L++ +L+    L+++P SI   ++L+R+V+ G           S H
Sbjct: 188 TLWEDESQVPWQVPLQLRELEINAPLSNIPKSIGWLEHLERIVVAG---------FLSGH 238

Query: 182 LRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNL 241
                    V + +LP     L ++ +L++  C +++++  S   L  L+ I +  C NL
Sbjct: 239 ---------VHLTKLPKEFCRLRSLRDLVLTECSKMKSLPDSFCHLWNLQHIDLSFCCNL 289

Query: 242 QFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPD 301
           + L      + G R        + L  C   E LP      + L  +++  C N E LPD
Sbjct: 290 ERLPDSIGRLQGLR-------HINLSYCHDLERLPDSIGRLRGLQHIDLRGCHNLESLPD 342

Query: 302 ELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI 361
             G L              +LP   G+   L  + L  C +L+ +  S   L+ ++ I++
Sbjct: 343 SFGELW-------------DLPYSFGEPWDLRHINLSGCHDLQRLPDSFVNLRYLQHIDL 389

Query: 362 SNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCK 421
             C NL+  P       DG G  R    V  L+ C  LE LP S    ++L  +++  C 
Sbjct: 390 QGCHNLQSLP-------DGFGDLRNLDHV-NLSNCHDLEWLPDSFGNLRNLQYIDLSGCH 441

Query: 422 KLERLPDELGNLEALEELRVEG 443
            LERLP+   N   L+ L VEG
Sbjct: 442 NLERLPNYFRNFNKLKYLDVEG 463



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 58/303 (19%)

Query: 217 LENISSSIFKLQFLESIRIHR--CPNLQFLEMPS--CNIDGTRSKEQPSSELKLKKCPRP 272
           L NI  SI  L+ LE I +      ++   ++P   C +   R       +L L +C + 
Sbjct: 213 LSNIPKSIGWLEHLERIVVAGFLSGHVHLTKLPKEFCRLRSLR-------DLVLTECSKM 265

Query: 273 ESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALL 332
           +SLP   C   +L  +++  C N ERLPD +G LQ                        L
Sbjct: 266 KSLPDSFCHLWNLQHIDLSFCCNLERLPDSIGRLQG-----------------------L 302

Query: 333 SKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLK 392
             + L  C +LE +  SI +L+ ++ I++  C NL+  P+                    
Sbjct: 303 RHINLSYCHDLERLPDSIGRLRGLQHIDLRGCHNLESLPD-------------------- 342

Query: 393 LNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVPK 451
                +L  LP S      L  + +  C  L+RLPD   NL  L+ + ++G   ++ +P 
Sbjct: 343 --SFGELWDLPYSFGEPWDLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCHNLQSLPD 400

Query: 452 SLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
               L  L  + L  C   E LP      ++L  +++  C N  RLP+   N   LK L 
Sbjct: 401 GFGDLRNLDHVNLSNCHDLEWLPDSFGNLRNLQYIDLSGCHNLERLPNYFRNFNKLKYLD 460

Query: 511 IKG 513
           ++G
Sbjct: 461 VEG 463



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 43/243 (17%)

Query: 75  SKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETHSSIQY 133
           SK+  L D   +L +L+ IDL +   L +LPD +   Q L  ++L YC  L     SI  
Sbjct: 263 SKMKSLPDSFCHLWNLQHIDLSFCCNLERLPDSIGRLQGLRHINLSYCHDLERLPDSIGR 322

Query: 134 LNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGI 193
           L  L+ +DL  C +L SLP S    +                                  
Sbjct: 323 LRGLQHIDLRGCHNLESLPDSFGELW---------------------------------- 348

Query: 194 EELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSCNIDG 253
            +LP S     ++  + +  C  L+ +  S   L++L+ I +  C NLQ L       DG
Sbjct: 349 -DLPYSFGEPWDLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCHNLQSLP------DG 401

Query: 254 TRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLI 313
                +    + L  C   E LP      ++L  +++  C N ERLP+   N   L  L 
Sbjct: 402 F-GDLRNLDHVNLSNCHDLEWLPDSFGNLRNLQYIDLSGCHNLERLPNYFRNFNKLKYLD 460

Query: 314 IDG 316
           ++G
Sbjct: 461 VEG 463



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 26/140 (18%)

Query: 12  PYTFSKMTELRLLKFCGSKNKCMVHSLEGVP--FTELRYFEWHQFPLKTLNILHWENLVS 69
           PY+F +  +LR +   G       H L+ +P  F  LRY       L+ +++    NL S
Sbjct: 351 PYSFGEPWDLRHINLSG------CHDLQRLPDSFVNLRY-------LQHIDLQGCHNLQS 397

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD-LSLAQNLEILDLGYCSSLTETH 128
           L           D   +L +L  ++L     L  LPD     +NL+ +DL  C +L    
Sbjct: 398 LP----------DGFGDLRNLDHVNLSNCHDLEWLPDSFGNLRNLQYIDLSGCHNLERLP 447

Query: 129 SSIQYLNKLEVLDLDRCKSL 148
           +  +  NKL+ LD++ C +L
Sbjct: 448 NYFRNFNKLKYLDVEGCSNL 467


>gi|417767308|ref|ZP_12415252.1| leucine rich repeat protein [Leptospira interrogans serovar Bulgarica
            str. Mallika]
 gi|400350245|gb|EJP02513.1| leucine rich repeat protein [Leptospira interrogans serovar Bulgarica
            str. Mallika]
          Length = 1616

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 39/268 (14%)

Query: 326  LGQLALLSKLELKNCS--ELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
            L +L  L K+EL+N +  +L  +SS    L+ VE ++I      +GF      + D SG+
Sbjct: 1168 LSELKNLKKIELQNWNLKDLNVLSSCT-NLEKVELVDI------QGFE----TDFDCSGL 1216

Query: 384  ERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                 + + LN   +K E  P S+  F++LTSL + DCK L  +P+ +GNL+ L  L ++
Sbjct: 1217 LNESKATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLINLYLD 1275

Query: 443  GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
               +  +P SL  L                       + LT L I D   F  +PD + +
Sbjct: 1276 KNQLTTLPASLGTL-----------------------EQLTQLHI-DSNPFTTIPDAVLS 1311

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
            L+ LK L  +   I  +P  +G L+SLE L L DN L  +P ++  LSSL  + LS N  
Sbjct: 1312 LKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKF 1371

Query: 563  ERIPERLDPLSSLKYLDLFENNLDRIPE 590
               PE +  L +LK+LD+ EN + ++PE
Sbjct: 1372 SEFPEPILYLKNLKHLDVGENKIRQLPE 1399



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 144/362 (39%), Gaps = 75/362 (20%)

Query: 111  QNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSN 170
            QNL  L L  C  L+E   SI  L +L  L LD+ + LT+LP S                
Sbjct: 1244 QNLTSLSLRDCK-LSEVPESIGNLKRLINLYLDKNQ-LTTLPAS---------------- 1285

Query: 171  LKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFL 230
            L  L ++T  H+ S  P   +     P ++  L N+  LL     ++  + + I  L  L
Sbjct: 1286 LGTLEQLTQLHIDSN-PFTTI-----PDAVLSLKNLKTLLA-RWNQISTLPNEIGNLTSL 1338

Query: 231  ESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEI 290
            E + +H               D   S                 SLP+      SLT + +
Sbjct: 1339 EDLNLH---------------DNQLS-----------------SLPTTIQNLSSLTKIGL 1366

Query: 291  IDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSI 350
                 F   P+ +  L+ L  L +    IR+LPE +G L+ L  L++K  + +E +  SI
Sbjct: 1367 -SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKE-TWIESLPQSI 1424

Query: 351  FKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFK 410
              L  +E+I +        F ++P    +   +++I     + N+ +K        C F+
Sbjct: 1425 QNLTQLETIYLPKAK----FRDLPDFLANMESLKKIKFESEEYNQLTK-------WCEFE 1473

Query: 411  SLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFE 470
                ++++   K     D++ NL        +G    ++ +   +L +S+   +K  +F 
Sbjct: 1474 YSKYIKLLHGGKYPEARDKITNL-----FTTKGEDFLKLNQWEVKLKISESYYRKAEAFA 1528

Query: 471  SL 472
            ++
Sbjct: 1529 TV 1530


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 36/282 (12%)

Query: 299 LPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVES 358
           LP E+G LQ+L  LI+    +  +P+   QL  L +L L + ++L  I   I +L++++ 
Sbjct: 160 LPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSL-SFNQLTAIPKEIEQLQNLQE 218

Query: 359 IEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEII 418
           ++ SN + LK  P+      +   ++ +    L  NK +    LP  +   + L  L  +
Sbjct: 219 MD-SNNNQLKTLPK------EIGNLQHLQKLYLSSNKIT---ILPKEIGNLQHLQKL-YL 267

Query: 419 DCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYV 478
              K+  LP E+GNL+ LE L +E   +  +PK + QL   K+              LY 
Sbjct: 268 SSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKV--------------LY- 312

Query: 479 SKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNN 538
                    +D  N   +P EIGNL+ L+ L +    +  +P+ +G L +L+ L L++N 
Sbjct: 313 ---------LDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNK 363

Query: 539 LQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDL 580
           L  +P+ +  L SL SL LS+N L   PE +  L  LK+L L
Sbjct: 364 LTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWLRL 405



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 17/255 (6%)

Query: 394 NKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSL 453
           N    L +LP  +   +SL  L I+   +L  +P E   L+ L+ L +    +  +PK +
Sbjct: 152 NSNDPLTTLPKEIGKLQSLQEL-ILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEI 210

Query: 454 AQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKG 513
            QL   +      +  ++LP  +   + L  L +   K    LP EIGNL++L+ L +  
Sbjct: 211 EQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNK-ITILPKEIGNLQHLQKLYLSS 269

Query: 514 TAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLS 573
             I  +P+ +G L  LE+L L  N L  +P+ + QL +L  L L +NNL  IP+ +  L 
Sbjct: 270 NKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGNLQ 329

Query: 574 SLKYLDLFENNLDRIPEYLRSFP------------TSIPSEFTSLRL--SVDLR-NCLKL 618
           +L+ LDL  N L  +P+ + +              T++P E  +L+   S+DL  N L  
Sbjct: 330 NLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSLESLDLSDNPLTS 389

Query: 619 DPNELSEIIKDGWMK 633
            P E+ ++    W++
Sbjct: 390 FPEEIGKLQHLKWLR 404



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 32/274 (11%)

Query: 122 SSLTETHSSIQYLNKLEVLDL------DRCKSLTSLPTSIHS-KYLKRLVLRGCSNLKNL 174
            +LTE   ++Q+   + VLDL      +    LT+LP  I   + L+ L+L G + L  +
Sbjct: 128 QNLTE---ALQHPTDVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELIL-GKNQLTTI 183

Query: 175 PK-MTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQ----- 228
           PK          L L    +  +P  I+ L N+ E+   +  +L+ +   I  LQ     
Sbjct: 184 PKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEM-DSNNNQLKTLPKEIGNLQHLQKL 242

Query: 229 FLESIRIHRCP----NLQFLE--MPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSG 278
           +L S +I   P    NLQ L+    S N      KE    Q    L L+   +  +LP  
Sbjct: 243 YLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLE-VNKLTTLPKE 301

Query: 279 QCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELK 338
               ++L  L  +D  N   +P E+GNLQ L  L ++   +  LP+ +G L  L  L+L 
Sbjct: 302 IGQLRNLKVL-YLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLN 360

Query: 339 NCSELEYISSSIFKLKSVESIEISNCSNLKGFPE 372
           N ++L  +   I  L+S+ES+++S+   L  FPE
Sbjct: 361 N-NKLTTLPQEIGNLQSLESLDLSDNP-LTSFPE 392



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 25/181 (13%)

Query: 61  ILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGY 120
           I + ++L  L +  +K+T L  ++ NL  L+ + L+ +KL T   ++   +NL++L L +
Sbjct: 256 IGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDH 315

Query: 121 CSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSC 180
            ++L      I  L  L+ LDL+  K LT+LP  I              NL+NL      
Sbjct: 316 -NNLANIPKEIGNLQNLQTLDLNNNK-LTTLPKEI-------------GNLQNL------ 354

Query: 181 HLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPN 240
               TL L    +  LP  I  L ++ E L  S   L +    I KLQ L+ +R+   P 
Sbjct: 355 ---QTLDLNNNKLTTLPQEIGNLQSL-ESLDLSDNPLTSFPEEIGKLQHLKWLRLENIPT 410

Query: 241 L 241
           L
Sbjct: 411 L 411


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 246/560 (43%), Gaps = 88/560 (15%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLAQNLEILDLGYCSSLTETH 128
           L + G K+T L  ++  L +L+ ++LK++ LLT LP ++   +NL+ LDL   + L    
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWN-LLTTLPKEIGQLENLQELDL-RDNQLATFP 110

Query: 129 SSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPL 188
           + I  L KLE LDL   + L  LP  I               L+NL           L L
Sbjct: 111 AVIVELQKLESLDLSENR-LIILPNEI-------------GRLQNL---------QDLGL 147

Query: 189 LGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPS 248
               +   P  I  L N+ +L + S  RL  +   I +L+ L+++ +    N QF  +P 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWL-SENRLTALPKEIGQLKNLQTLDLQ---NNQFTILPK 203

Query: 249 --CNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNL 306
               +   ++     ++L         +LP      ++L  L + +      LP E+G L
Sbjct: 204 EIGQLQNLQTLNLQDNQLA--------TLPVEIGQLQNLQELYLRNN-RLTVLPKEIGQL 254

Query: 307 QALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEI-SNCS 365
           Q L  L      +  LP+ +GQL  L  L L N + L  +   I +L++++ +E+  N  
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVN-NRLTVLPKEIGQLQNLQDLELLMNPL 313

Query: 366 NLKGFPEI----PFCNID-----GSGIER-------------------------IPSSVL 391
           +LK    I    P  N+D       G+ R                          P  +L
Sbjct: 314 SLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVIL 373

Query: 392 KLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGT 444
           K     +L        +LP  +   K+L  L  +    L+++P E+G L  LE L +E  
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYL-ALGLNGLKKIPSEIGQLRNLEALNLEAN 432

Query: 445 GIREVPKSLAQLA-LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNL 503
            +  +PK + QL  L +L L + ++ +  P+ +   K L  L++     F   P EIG L
Sbjct: 433 ELERLPKEIGQLRNLQRLSLHQ-NTLKIFPAEIEQLKKLQKLDL-SVNQFTTFPKEIGKL 490

Query: 504 EYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
           E L+ L ++   +  +P  + QL +L+ L L+DN   ++P+ + +L  L +L L NN L 
Sbjct: 491 ENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLT 550

Query: 564 RIPERLDPLSSLKYLDLFEN 583
            +P  +  L +L++L L  N
Sbjct: 551 TLPTEIGQLQNLQWLYLQNN 570



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 222/519 (42%), Gaps = 121/519 (23%)

Query: 196 LPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESI------------RIHRCPNLQF 243
           LP  I  L N+ EL +    +L    + I +LQ LES+             I R  NLQ 
Sbjct: 86  LPKEIGQLENLQELDLRD-NQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQD 144

Query: 244 LEMPSCNIDGTRSKE----QPSSELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERL 299
           L +    +  T  KE    Q   +L L +  R  +LP      K+L +L++ +   F  L
Sbjct: 145 LGLYKNKLT-TFPKEIGQLQNLQKLWLSEN-RLTALPKEIGQLKNLQTLDLQNN-QFTIL 201

Query: 300 PDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESI 359
           P E+G LQ L  L +    +  LP  +GQL  L +L L+N + L  +   I +L++++ +
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN-NRLTVLPKEIGQLQNLQML 260

Query: 360 EISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIID 419
               CS     PE                        ++L +LP  +   K+L +L +++
Sbjct: 261 ----CS-----PE------------------------NRLTALPKEMGQLKNLQTLNLVN 287

Query: 420 CKKLERLPDELGNLEALEEL-------------RVE------GTGIREVPK-------SL 453
             +L  LP E+G L+ L++L             R++         +REV +       +L
Sbjct: 288 -NRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNL 346

Query: 454 AQ---LALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDC------------KNFM---- 494
           AQ   L +  L+L+  +  +  P  +   ++L  L + DC            KN      
Sbjct: 347 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 406

Query: 495 ------RLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQ 548
                 ++P EIG L  L+ L ++   +  +P+ +GQL +L+ L L  N L+I P  + Q
Sbjct: 407 GLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQ 466

Query: 549 LSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP---EYLRSFP--------- 596
           L  L  L LS N     P+ +  L +L+ L+L  N L  +P   E L++           
Sbjct: 467 LKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQF 526

Query: 597 TSIPSEFTSLR--LSVDLRNC-LKLDPNELSEIIKDGWM 632
           T +P E   L+   ++DLRN  L   P E+ ++    W+
Sbjct: 527 TVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 100/173 (57%), Gaps = 3/173 (1%)

Query: 418 IDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLA-LSKLKLKKCSSFESLPSRL 476
           +  +KL  LP E+G L+ L+EL ++   +  +PK + QL  L +L L+  +   + P+ +
Sbjct: 55  LSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRD-NQLATFPAVI 113

Query: 477 YVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSD 536
              + L SL++ + +  + LP+EIG L+ L+ L +    +   P+ +GQL +L+ L LS+
Sbjct: 114 VELQKLESLDLSENR-LIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 537 NNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLDLFENNLDRIP 589
           N L  +P+ + QL +L +L L NN    +P+ +  L +L+ L+L +N L  +P
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLP 225



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 206/492 (41%), Gaps = 123/492 (25%)

Query: 52  HQFPLKTLNILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLP-DLSLA 110
           +QF +    I   +NL +L +  +++  L  ++  L +L+ + L+ ++L T LP ++   
Sbjct: 196 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRL-TVLPKEIGQL 254

Query: 111 QNLEILDLGYCS---SLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRG 167
           QNL++L    CS    LT     +  L  L+ L+L   + LT LP  I            
Sbjct: 255 QNLQML----CSPENRLTALPKEMGQLKNLQTLNLVNNR-LTVLPKEIGQ---------- 299

Query: 168 CSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKL 227
             NL++L  + +                 P S+K    I +L   S   L  ++      
Sbjct: 300 LQNLQDLELLMN-----------------PLSLKERKRIQKLFPDSNLDLREVAED---- 338

Query: 228 QFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSS--ELKLKKCPRPESLPSGQCMFKSL 285
                  ++R  NL              ++E+P    +L+L+     +  P     F++L
Sbjct: 339 ------GVYRNLNL--------------AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNL 378

Query: 286 TSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEY 345
             L + DC  F  LP E+  L+ L  L +    ++++P  +GQL  L  L L+  +ELE 
Sbjct: 379 RELYLYDC-GFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE-ANELER 436

Query: 346 ISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSS 405
           +   I +L++++ + +   + LK FP         + IE++           KL+ L  S
Sbjct: 437 LPKEIGQLRNLQRLSLHQNT-LKIFP---------AEIEQL----------KKLQKLDLS 476

Query: 406 LCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALSKLKLKK 465
           +  F +               P E+G LE L+ L ++   +  +P  + QL         
Sbjct: 477 VNQFTT--------------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQL--------- 513

Query: 466 CSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREVPESLGQ 525
                         K+L  L++ D + F  LP EIG L+ L+ L ++   +  +P  +GQ
Sbjct: 514 --------------KNLQELDLNDNQ-FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQ 558

Query: 526 LSSLEWLVLSDN 537
           L +L+WL L +N
Sbjct: 559 LQNLQWLYLQNN 570


>gi|108739957|gb|ABG01367.1| disease resistance protein [Arabidopsis thaliana]
          Length = 201

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 97/188 (51%), Gaps = 3/188 (1%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            LR   W  +P   L    H E LV L +  S++ +LW   Q L +LK++DL  S  L +
Sbjct: 5   HLRLLRWEAYPSNALPTTFHPEYLVELDLKDSQLEKLWQGTQPLTNLKKMDLTRSSHLKE 64

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LPDLS A NLE L+L YC SL E  SS   L KLE L +  C  L  +PT I+   L   
Sbjct: 65  LPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFF 124

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS LK  P + S H+ S L +    +EELP+SI   + +  L+I      + ++  
Sbjct: 125 NMHGCSQLKKFPGI-STHI-SRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYL 182

Query: 224 IFKLQFLE 231
              L +L+
Sbjct: 183 PMSLTYLD 190



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 18/191 (9%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L+LK+ S+LE +      L +++ ++++  S+LK  P++     + + +ER     L
Sbjct: 28  LVELDLKD-SQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLS----NATNLER-----L 77

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
           +L+ C  L  +PSS    + L +L I +C KLE +P  L NL +L+   + G + +++ P
Sbjct: 78  ELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPT-LINLASLDFFNMHGCSQLKKFP 136

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                  +S+L +   +  E LP+ + +   L +L I    NF  L     +L YL    
Sbjct: 137 G--ISTHISRLVIDD-TLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLD--- 190

Query: 511 IKGTAIREVPE 521
           ++ T I ++P+
Sbjct: 191 LRCTGIEKIPD 201



 Score = 46.2 bits (108), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 26/175 (14%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 48  LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIH 104

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC+ L+  P +    I+ + ++        ++ CS+L+  P       +  S  +ID   
Sbjct: 105 NCTKLEVVPTL----INLASLD-----FFNMHGCSQLKKFPG----ISTHISRLVIDDTL 151

Query: 423 LERLPDELGNLEALEELRVEGTG----IREVPKSLAQLALSKLKLKKCSSFESLP 473
           +E LP  +     L  L + G+G    +  +P SL  L L      +C+  E +P
Sbjct: 152 VEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDL------RCTGIEKIP 200



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 62/199 (31%)

Query: 150 SLPTSIHSKYLKRLVLR---------GCSNLKNLPKMT---SCHLRSTLPLLGVGIEELP 197
           +LPT+ H +YL  L L+         G   L NL KM    S HL+           ELP
Sbjct: 18  ALPTTFHPEYLVELDLKDSQLEKLWQGTQPLTNLKKMDLTRSSHLK-----------ELP 66

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ------------FLE 245
             +   +N+  L +  CK L  I SS  +L+ LE++ IH C  L+            F  
Sbjct: 67  D-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFN 125

Query: 246 MPSCN----------------IDGTRSKEQPSSELKLKKCPRPESLP-SGQCMFKSLTSL 288
           M  C+                ID T  +E P+S   +  C R  +L  SG   FK+LT L
Sbjct: 126 MHGCSQLKKFPGISTHISRLVIDDTLVEELPTS---IILCTRLRTLMISGSGNFKTLTYL 182

Query: 289 EI------IDCPNFERLPD 301
            +      + C   E++PD
Sbjct: 183 PMSLTYLDLRCTGIEKIPD 201


>gi|418716289|ref|ZP_13276303.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787972|gb|EKR81701.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 1616

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 39/268 (14%)

Query: 326  LGQLALLSKLELK--NCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGI 383
            L +L  L K+EL   N  +L  ++S I    ++E IE+ N   +KGF      + D S +
Sbjct: 1168 LSELKNLKKIELDDWNLKDLNVLNSCI----NLEEIELRN---IKGFE----TDFDCSEL 1216

Query: 384  ERIPSSVLKLN-KCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVE 442
                 + + LN   +K E  P S+  F++LTSL + DCK L  +P+ +GNL+ L +L + 
Sbjct: 1217 LNESKATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCK-LSEVPESIGNLKRLIDLHLN 1275

Query: 443  GTGIREVPKSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
               +  +P SL  L                       + LT L I D   F  +PD + +
Sbjct: 1276 SNQLTTLPASLGTL-----------------------EQLTQLHI-DSNPFTTIPDAVLS 1311

Query: 503  LEYLKVLTIKGTAIREVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNL 562
            L+ LK L  +   I  +P  +G L+SLE L L DN L  +P ++  LSSL  + LS N  
Sbjct: 1312 LKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKF 1371

Query: 563  ERIPERLDPLSSLKYLDLFENNLDRIPE 590
               PE +  L +LK+LD+ EN + ++PE
Sbjct: 1372 SEFPEPILYLKNLKHLDVGENKIRQLPE 1399



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 176/401 (43%), Gaps = 78/401 (19%)

Query: 170  NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGEL----LIYSCKRLENISSSIF 225
            N KN+ K+T  ++RS+  +  +   +  + ++ L+  G +    L+   K L+ I    +
Sbjct: 1123 NHKNISKITKMYIRSSYKITSIQELKFFTKLEELTINGPVTDSSLLSELKNLKKIELDDW 1182

Query: 226  KLQFLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC--------PRPESLPS 277
             L+ L    ++ C NL+ +E+   NI G  +    S  L   K          + E  P 
Sbjct: 1183 NLKDLNV--LNSCINLEEIEL--RNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPI 1238

Query: 278  GQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLEL 337
                F++LTSL + DC     +P+ +GNL+ L  L ++   +  LP  LG L  L++L  
Sbjct: 1239 SVTRFQNLTSLSLRDC-KLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTQL-- 1295

Query: 338  KNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS 397
                                                   +ID +    IP +VL L    
Sbjct: 1296 ---------------------------------------HIDSNPFTTIPDAVLSL---- 1312

Query: 398  KLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL- 456
                        K+L +L +    ++  LP+E+GNL +LE+L +    +  +P ++  L 
Sbjct: 1313 ------------KNLKTL-LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLS 1359

Query: 457  ALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAI 516
            +L+K+ L K + F   P  +   K+L  L++ + K   +LP+ IGNL  LK L IK T I
Sbjct: 1360 SLTKIGLSK-NKFSEFPEPILYLKNLKHLDVGENK-IRQLPETIGNLSNLKSLDIKETWI 1417

Query: 517  REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKL 557
              +P+S+  L+ LE + L     + +P+ L  + SL  +K 
Sbjct: 1418 ESLPQSIQNLTQLETIYLPKAKFRDLPDFLANMESLKKIKF 1458



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 174/433 (40%), Gaps = 72/433 (16%)

Query: 85   QNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDR 144
            +N+  + ++ ++ S  +T + +L     LE L +    + +   S ++ L K+E+ D + 
Sbjct: 1125 KNISKITKMYIRSSYKITSIQELKFFTKLEELTINGPVTDSSLLSELKNLKKIELDDWN- 1183

Query: 145  CKSLTSLPTSIHSKYLKRLVLRG------CSNLKNLPKMTSCHLRSTLPLLGVGIEELPS 198
             K L  L + I+ + ++   ++G      CS L N  K T  HL     L G   E  P 
Sbjct: 1184 LKDLNVLNSCINLEEIELRNIKGFETDFDCSELLNESKAT-IHLN----LSGTKFERFPI 1238

Query: 199  SIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQFLEMPSC--------- 249
            S+    N+  L +  CK L  +  SI  L+ L  I +H   N Q   +P+          
Sbjct: 1239 SVTRFQNLTSLSLRDCK-LSEVPESIGNLKRL--IDLHLNSN-QLTTLPASLGTLEQLTQ 1294

Query: 250  -NIDGTRSKEQPSSELKLK-------KCPRPESLPSGQCMFKSLTSLEIIDCP------- 294
             +ID       P + L LK       +  +  +LP+      SL  L + D         
Sbjct: 1295 LHIDSNPFTTIPDAVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTT 1354

Query: 295  ---------------NFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKN 339
                            F   P+ +  L+ L  L +    IR+LPE +G L+ L  L++K 
Sbjct: 1355 IQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKE 1414

Query: 340  CSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKL 399
               +E +  SI  L  +E+I +        F ++P    +   +++I     + N+ +K 
Sbjct: 1415 TW-IESLPQSIQNLTQLETIYLPKAK----FRDLPDFLANMESLKKIKFESEEYNQLTK- 1468

Query: 400  ESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQLALS 459
                   C F+    ++++   K     D++ NL        +G    ++ +   +L +S
Sbjct: 1469 ------WCEFEYSKYIKLLHGGKYPEARDKIKNL-----FTTKGEDFLKLNQWEVKLKIS 1517

Query: 460  KLKLKKCSSFESL 472
            +   +K  +F ++
Sbjct: 1518 ESYYRKAEAFATV 1530


>gi|271962539|ref|YP_003336735.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270505714|gb|ACZ83992.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 354

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 39/318 (12%)

Query: 316 GTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS-----NCSNLKGF 370
           G  +  LP   G  ALL +++L   + L  +   + +L  +E + +      +  +L G 
Sbjct: 9   GAGLTALPAPAGDPALLRRIDLA-WNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHGL 67

Query: 371 PEIPFCNIDGSGIERIPSSVLKLNKCSKL-------ESLPSSLCMFKSLTSLEIIDCKKL 423
             +   ++DG+ + R P SVL+L +   L         LP  + + + L  L +     L
Sbjct: 68  TALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAV-GGNAL 126

Query: 424 ERLPDELGNLEALEELRVEGTGIREVPKSLAQL-----------ALSKL--KLKKCSS-- 468
             +P  L  L  L  L +    I EVP+++ +L           AL+++   +   S+  
Sbjct: 127 TSVPAGLWRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLT 186

Query: 469 ---------FESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIREV 519
                    F S+P+ L     LT L + D +    LP  IG L  L+ L + G  +RE+
Sbjct: 187 DYLYLSDNRFTSVPASLGGLTRLTYLNLTDNR-LTDLPAAIGGLTALRELRLYGNRLREI 245

Query: 520 PESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLERIPERLDPLSSLKYLD 579
           PE++G+L  L  L L +N L  +P S+  LS L  L L NN +  +P  L  LS L +LD
Sbjct: 246 PETIGRLRELRELHLMNNALTCLPASVGDLSGLRLLDLRNNAITSLPGSLTGLSRLTHLD 305

Query: 580 LFENNLDRIPEYLRSFPT 597
           L  N L  IP  L   P 
Sbjct: 306 LRNNRLREIPGGLADLPA 323



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 154/346 (44%), Gaps = 69/346 (19%)

Query: 235 IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSLEII--D 292
           + R P L+ L +     DG R ++ P                        LT+L  +  D
Sbjct: 42  VGRLPRLEDLRL-----DGNRLRDLPD--------------------LHGLTALRALHLD 76

Query: 293 CPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFK 352
                R P+ +  L  L  L + G AI ELPEG+G L  L  L +   + L  + + +++
Sbjct: 77  GNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAV-GGNALTSVPAGLWR 135

Query: 353 LKSVESIEISNCS------NLKGFPEIPFCNIDGSGIERIPSSVLKLNKCS--------K 398
           L  + S+ ++  S       +    E+   ++  + + RIP ++  L+  +        +
Sbjct: 136 LTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNR 195

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPKSLAQL-A 457
             S+P+SL     LT L + D  +L  LP  +G L AL ELR+ G  +RE+P+++ +L  
Sbjct: 196 FTSVPASLGGLTRLTYLNLTD-NRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRE 254

Query: 458 LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLTIKGTAIR 517
           L +L L              ++ +LT      C     LP  +G+L  L++L ++  AI 
Sbjct: 255 LRELHL--------------MNNALT------C-----LPASVGDLSGLRLLDLRNNAIT 289

Query: 518 EVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSNNNLE 563
            +P SL  LS L  L L +N L+ IP  L  L +L  L L  N L+
Sbjct: 290 SLPGSLTGLSRLTHLDLRNNRLREIPGGLADLPALEKLDLRWNKLD 335



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 157/391 (40%), Gaps = 89/391 (22%)

Query: 70  LKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTKLPD----LSLAQNLEILDLGYCSSLT 125
           +K PG+ +T L     +   L+RIDL ++  LT+LP+    L   ++L  LD      L 
Sbjct: 5   MKAPGAGLTALPAPAGDPALLRRIDLAWNA-LTELPEWVGRLPRLEDLR-LDGNRLRDLP 62

Query: 126 ETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRST 185
           + H     L  L  L LD   +LT  P S         VLR       LP++       T
Sbjct: 63  DLHG----LTALRALHLD-GNALTRFPES---------VLR-------LPEL------RT 95

Query: 186 LPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIR----------- 234
           L L G  I ELP  I  L  +  L +     L ++ + +++L  L S+            
Sbjct: 96  LFLYGNAIGELPEGIGLLRGLRHLAV-GGNALTSVPAGLWRLTGLASLNLAENSITEVPE 154

Query: 235 -IHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKC-----PRPESLPSGQCMFKSLTSL 288
            I R   L+ L++    +  TR  E       L         R  S+P+       LT L
Sbjct: 155 TIGRLTELRMLDLGHNAL--TRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTYL 212

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISS 348
            + D      LP  +G L AL  L + G  +RE+PE +G+L  L +L L N + L  + +
Sbjct: 213 NLTDN-RLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELRELHLMN-NALTCLPA 270

Query: 349 SIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCM 408
           S+  L  +  +++ N                                 + + SLP SL  
Sbjct: 271 SVGDLSGLRLLDLRN---------------------------------NAITSLPGSLTG 297

Query: 409 FKSLTSLEIIDCKKLERLPDELGNLEALEEL 439
              LT L++ +  +L  +P  L +L ALE+L
Sbjct: 298 LSRLTHLDLRN-NRLREIPGGLADLPALEKL 327


>gi|108739945|gb|ABG01361.1| disease resistance protein [Arabidopsis thaliana]
 gi|108739949|gb|ABG01363.1| disease resistance protein [Arabidopsis thaliana]
 gi|108739970|gb|ABG01373.1| disease resistance protein [Arabidopsis thaliana]
 gi|108739980|gb|ABG01378.1| disease resistance protein [Arabidopsis thaliana]
 gi|108739986|gb|ABG01381.1| disease resistance protein [Arabidopsis thaliana]
 gi|108739988|gb|ABG01382.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740004|gb|ABG01390.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740012|gb|ABG01394.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740055|gb|ABG01415.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740074|gb|ABG01424.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740076|gb|ABG01425.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740083|gb|ABG01428.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740103|gb|ABG01438.1| disease resistance protein [Arabidopsis thaliana]
          Length = 201

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 97/188 (51%), Gaps = 3/188 (1%)

Query: 45  ELRYFEWHQFPLKTL-NILHWENLVSLKMPGSKVTQLWDDVQNLVSLKRIDLKYSKLLTK 103
            LR   W  +P   L    H E LV L +  S++ +LW   Q L +LK++DL  S  L +
Sbjct: 5   HLRLLRWEAYPSNALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLKE 64

Query: 104 LPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLDRCKSLTSLPTSIHSKYLKRL 163
           LPDLS A NLE L+L YC SL E  SS   L KLE L +  C  L  +PT I+   L   
Sbjct: 65  LPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFF 124

Query: 164 VLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENISSS 223
            + GCS LK  P + S H+ S L +    +EELP+SI   + +  L+I      + ++  
Sbjct: 125 NMHGCSQLKKFPNI-STHI-SRLVIDDTLVEELPTSIILCTRLRTLMISGSGNFKTLTYL 182

Query: 224 IFKLQFLE 231
              L +L+
Sbjct: 183 PMSLTYLD 190



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 18/191 (9%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L +L+LK  S+LE +      L +++ ++++  S+LK  P++     + + +ER     L
Sbjct: 28  LVELDLKE-SQLEKLWQGTQPLTNLKKMDLTRSSHLKELPDLS----NATNLER-----L 77

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEG-TGIREVP 450
           +L+ C  L  +PSS    + L +L I +C KLE +P  L NL +L+   + G + +++ P
Sbjct: 78  ELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPT-LINLASLDFFNMHGCSQLKKFP 136

Query: 451 KSLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGNLEYLKVLT 510
                  +S+L +   +  E LP+ + +   L +L I    NF  L     +L YL    
Sbjct: 137 N--ISTHISRLVIDD-TLVEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLD--- 190

Query: 511 IKGTAIREVPE 521
           ++ T I ++P+
Sbjct: 191 LRCTGIEKIPD 201



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 26/175 (14%)

Query: 303 LGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSELEYISSSIFKLKSVESIEIS 362
           L NL+ ++  +   + ++ELP+ L     L +LEL  C  L  I SS  +L+ +E++ I 
Sbjct: 48  LTNLKKMD--LTRSSHLKELPD-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIH 104

Query: 363 NCSNLKGFPEIPFCNIDGSGIERIPSSVLKLNKCSKLESLPSSLCMFKSLTSLEIIDCKK 422
           NC+ L+  P +    I+ + ++        ++ CS+L+  P+      +  S  +ID   
Sbjct: 105 NCTKLEVVPTL----INLASLD-----FFNMHGCSQLKKFPN----ISTHISRLVIDDTL 151

Query: 423 LERLPDELGNLEALEELRVEGTG----IREVPKSLAQLALSKLKLKKCSSFESLP 473
           +E LP  +     L  L + G+G    +  +P SL  L L      +C+  E +P
Sbjct: 152 VEELPTSIILCTRLRTLMISGSGNFKTLTYLPMSLTYLDL------RCTGIEKIP 200



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 62/199 (31%)

Query: 150 SLPTSIHSKYLKRLVLR---------GCSNLKNLPKMT---SCHLRSTLPLLGVGIEELP 197
           +LPT+ H +YL  L L+         G   L NL KM    S HL+           ELP
Sbjct: 18  ALPTTFHPEYLVELDLKESQLEKLWQGTQPLTNLKKMDLTRSSHLK-----------ELP 66

Query: 198 SSIKCLSNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCPNLQ------------FLE 245
             +   +N+  L +  CK L  I SS  +L+ LE++ IH C  L+            F  
Sbjct: 67  D-LSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINLASLDFFN 125

Query: 246 MPSCN----------------IDGTRSKEQPSSELKLKKCPRPESLP-SGQCMFKSLTSL 288
           M  C+                ID T  +E P+S   +  C R  +L  SG   FK+LT L
Sbjct: 126 MHGCSQLKKFPNISTHISRLVIDDTLVEELPTS---IILCTRLRTLMISGSGNFKTLTYL 182

Query: 289 EI------IDCPNFERLPD 301
            +      + C   E++PD
Sbjct: 183 PMSLTYLDLRCTGIEKIPD 201


>gi|296081026|emb|CBI18530.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 169/355 (47%), Gaps = 51/355 (14%)

Query: 8   IQINPYTFSKMTELRLLKFC-GSKNKCMVHSLE-------GVPFTELRYFEWHQFPLKTL 59
           I+     F  M +LRLLK C G K   MV + E         P  ELRY  W  +PL+ L
Sbjct: 65  IEFTTEAFKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELRYLHWDGYPLEYL 124

Query: 60  -NILHWENLVSLKMPGSKVTQLW------DDVQNLVSLKRIDLKYSKLLTKLPDLSLAQN 112
            +  H ENLV L +  SK+  LW      + ++ L  LK I+L +S+ L ++PD S   N
Sbjct: 125 PSNFHGENLVELNLRYSKLRVLWQGLKPPEKLKPLEKLKVINLSHSQQLIQIPDFSDTPN 184

Query: 113 LEILDLGYCSSLTETHSSIQYLNKLEVLDLDRC---KSLTSLPTSIHSKYLKRLVLRGCS 169
           LE L L  C++L    SSI +L+ L  LDL  C   + L  +P +++S  L+ L L  C 
Sbjct: 185 LESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYS--LEYLNLASCK 242

Query: 170 NLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCLSNIGELLIYSCKRLENIS-SSIFKLQ 228
           NLK+LP+ + C+L+    L  +G  +LP ++  L  + +L   S + +   S SS+  L 
Sbjct: 243 NLKSLPE-SLCNLKCLKTLNVIGCSKLPDNLGSLECLEKLYASSSELISPQSDSSLAGLC 301

Query: 229 FLESIRIHRCPNLQFLEMPSCNIDGTRSKEQPSSELKLKKCPRPESLPSGQCMFKSLTSL 288
            L+ + +H    +Q     S +I    S E    EL L  C              +LT  
Sbjct: 302 SLKVLDMHDTNLMQ--RAISGDIGSLYSLE----ELNLSYC--------------NLTEK 341

Query: 289 EIIDCPNFERLPDELGNLQALNRLIIDGTAIRELPEGLGQLALLSKLELKNCSEL 343
           EI         PD++  L +L  L + G     + + + QL+ L +L L++C  L
Sbjct: 342 EI---------PDDICCLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSL 387



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 194/472 (41%), Gaps = 110/472 (23%)

Query: 332 LSKLELKNCSELEYISSSIFKLKSVESIEISNCSNLKGFPEIPFCNIDGSGIERIPSSVL 391
           L  L LK C+ LE I SSI+ L S+ ++++S+CS L+   EIP+               L
Sbjct: 185 LESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPW--------NLYSLEYL 236

Query: 392 KLNKCSKLESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVPK 451
            L  C  L+SLP SLC  K L +L +I C K   LPD LG+LE LE+L    + +   P+
Sbjct: 237 NLASCKNLKSLPESLCNLKCLKTLNVIGCSK---LPDNLGSLECLEKLYASSSELIS-PQ 292

Query: 452 SLAQLALSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCK--NFMR--LPDEIGNLEYLK 507
           S + LA                        L SL+++D    N M+  +  +IG+L  L+
Sbjct: 293 SDSSLA-----------------------GLCSLKVLDMHDTNLMQRAISGDIGSLYSLE 329

Query: 508 VLTIKGTAI--REVPESLGQLSSLEWLVLSDNNLQIIPESLNQLSSLVSLKLSN-NNLER 564
            L +    +  +E+P+ +  L SL  L LS N    + ++++QLS L  L L +  +L  
Sbjct: 330 ELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSLLE 389

Query: 565 IPERLDPLSSLKYLD---------LFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
           IP+     SSL+ LD         L   ++ +    L  F ++   E   ++     R  
Sbjct: 390 IPKL---PSSLRVLDAHDCTGIKTLSSTSVLQWQWQLNCFKSAFLQEIQEMK----YRRL 442

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMYFPG-NEIPKWFRHQSTGSTISLKTPQPT 674
           L L  N +S+                   S   PG  E+P+  +  ST    ++   QP 
Sbjct: 443 LSLPANGVSQGF-----------------STVIPGSGELPEVNQRSSTSENATVNITQPY 485

Query: 675 GYNKLMGF-----AFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEG-YDSYTSSY 728
                + F      F   ++C  S  C H                D  SE  + +Y S+ 
Sbjct: 486 HLGCELTFLDDEIGFLDYLSCGSSCQCDHN---------------DGVSESVWVTYYSNV 530

Query: 729 LGKISHVESDHVFLGSSIFAGENSCKRSDEFFFHIDRSCCEVKKCGIHFVHA 780
             K  +      FL +S             F  H++    +V++CGI  VH 
Sbjct: 531 AIKHRYRSDKPRFLKAS-------------FRGHVNGKPVKVEQCGIGLVHV 569


>gi|255564938|ref|XP_002523462.1| hypothetical protein RCOM_1044030 [Ricinus communis]
 gi|223537290|gb|EEF38921.1| hypothetical protein RCOM_1044030 [Ricinus communis]
          Length = 468

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 214/477 (44%), Gaps = 86/477 (18%)

Query: 354 KSVESIEISNCSNLKGFPEIP------FCNIDG-SGIERIPSSV--------LKLNKCSK 398
           + ++ + +S C NLK  P++       F ++DG   +  IPS +        L L  C K
Sbjct: 5   QKLKRLVLSGCVNLKKLPDLSTATNLEFIDVDGCKNLLEIPSYIQYLRNLYYLNLCGCEK 64

Query: 399 LESLPSSLCMFKSLTSLEIIDCKKLERLPDELGNLEALEELRVEGTGIREVP-----KSL 453
           L+++PS L   +SL  L +  C  L ++P E+   E ++ LR+   G++ +      + L
Sbjct: 65  LQNVPS-LVQLESLKFLSLSYCYNL-KIPPEIP--EGIQNLRLNRCGLKAIAAFEKLQEL 120

Query: 454 AQLA-----------LSKLKLKKCSSFESLPSRLYVSKSLTSLEIIDCKNFMRLPDEIGN 502
            QL            L KL L  C + +SLPS L   KSLT L++  C N  +LP+    
Sbjct: 121 LQLNKWYECLRFPHNLQKLSLNGCENLDSLPS-LVDLKSLTLLDLSCCSNLTKLPNIPRG 179

Query: 503 LEYLKVLTIKGTAIREVPESLGQLSSL------EWLVLSDNNLQIIPESLNQLSSLVSLK 556
           ++   VL +  + I ++P S+  LSSL      EW  L++  +  IP  +  LSSL+ L 
Sbjct: 180 VQ---VLRLGNSGIEKLPSSISCLSSLVELELKEWRNLAETAIVKIPGDIFSLSSLLVLC 236

Query: 557 LSN-NNLERIPERLDPLSSLKYLDLFENNLDRIPEYLRSFPTSIPSEFTSLRLSVDLRNC 615
           L+N   L  +PE    L  L+ L     N   +    +S   ++  E        +  NC
Sbjct: 237 LNNCKRLRVLPELPKQLRQLQAL-----NCTSLETAKKSSSFAVVQEPNKYTYQFNYCNC 291

Query: 616 LKLDPNELSEIIKDGWMKQSVNGETYITKSMY----FPGNEIPKWFRHQSTGSTISLKTP 671
             L       II D  ++  + G    T+++     FPG+E+P+ F  +S GS+IS+K P
Sbjct: 292 FNLKQTSHCNIIADSLLR--IKGIDKATEALEYIVGFPGSEVPEQFECKSEGSSISIKLP 349

Query: 672 QPTGYNKLMGFAFCVVVACSVSECCRHESVEDDRKCNLFDVVCDRRSEGYDSYTSSYLGK 731
                +K +GFAF             + + +DD   +    +C    E  + Y       
Sbjct: 350 PHYNNSKDLGFAF------------YNGNQKDDNDKDFDRAICCYLEEKGEKYI------ 391

Query: 732 ISHVESDHVFLGSSIFAGENSCKRSDEFFFHI---DRSCC--EVKKCGIHFVHAQRQ 783
              +ESDH+F+    +  E+ C   +E  F     D S    E+K CG+H +  +++
Sbjct: 392 ---LESDHLFIW---YTTESYCDNGNEVSFKFNCKDPSGVKLEIKNCGVHMIWIEQK 442



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 134/297 (45%), Gaps = 53/297 (17%)

Query: 84  VQNLVSLKRIDLKYSKLLTKLPDLSLAQNLEILDLGYCSSLTETHSSIQYLNKLEVLDLD 143
           +Q    LKR+ L     L KLPDLS A NLE +D+  C +L E  S IQYL  L  L+L 
Sbjct: 1   MQRPQKLKRLVLSGCVNLKKLPDLSTATNLEFIDVDGCKNLLEIPSYIQYLRNLYYLNLC 60

Query: 144 RCKSLTSLPTSIHSKYLKRLVLRGCSNLKNLPKMTSCHLRSTLPLLGVGIEELPSSIKCL 203
            C+ L ++P+ +  + LK L L  C NLK  P++              GI+ L      L
Sbjct: 61  GCEKLQNVPSLVQLESLKFLSLSYCYNLKIPPEIPE------------GIQNLR-----L 103

Query: 204 SNIGELLIYSCKRLENISSSIFKLQFLESIRIHRCP-NLQFLEMPSCNIDGTRSKEQPSS 262
           +  G   I + ++L+ +      LQ  +     R P NLQ                    
Sbjct: 104 NRCGLKAIAAFEKLQEL------LQLNKWYECLRFPHNLQ-------------------- 137

Query: 263 ELKLKKCPRPESLPSGQCMFKSLTSLEIIDCPNFERLPDELGNLQALNRLIIDGTAIREL 322
           +L L  C   +SLPS     KSLT L++  C N  +LP+    +Q L    +  + I +L
Sbjct: 138 KLSLNGCENLDSLPS-LVDLKSLTLLDLSCCSNLTKLPNIPRGVQVLR---LGNSGIEKL 193

Query: 323 PEGLGQLALLSKLELKNCSELE-----YISSSIFKLKSVESIEISNCSNLKGFPEIP 374
           P  +  L+ L +LELK    L       I   IF L S+  + ++NC  L+  PE+P
Sbjct: 194 PSSISCLSSLVELELKEWRNLAETAIVKIPGDIFSLSSLLVLCLNNCKRLRVLPELP 250


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.135    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,635,734,330
Number of Sequences: 23463169
Number of extensions: 478335137
Number of successful extensions: 1634222
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10792
Number of HSP's successfully gapped in prelim test: 19869
Number of HSP's that attempted gapping in prelim test: 1226315
Number of HSP's gapped (non-prelim): 172955
length of query: 785
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 634
effective length of database: 8,816,256,848
effective search space: 5589506841632
effective search space used: 5589506841632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)